RNF26

General Information

Gene Name       : RNF26
Gene ID             : ENSG00000173456.4
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RNF26)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RNF26ENSG00000173456.46.5412.739.63ENCSR000AEF
HepG2RNF26ENSG00000173456.450.1530.4740.31ENCSR985KAT
K562RNF26ENSG00000173456.435.2326.5730.90ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
RNF26Ribo-STAMP-293TshRNARNF26-BGRSLV06-31,RNF26-BGRSLV06-32NT-BGRSLV06-1,NT-BGRSLV06-2,SubmittedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RNF26 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RNF26 RNA is bound by 11 proteins.  







eCLIP assay for RNF26 is not avaliable on ENCORE database.





11 proteins are bound to RNF26 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11119207830119207873+3'-UTR4.383224.43679K562IGF2BP1
chr11119207887119207954+3'-UTR4.363773.57526HepG2IGF2BP1
chr11119207211119207283+3'-UTR4.911463.92758K562PCBP1
chr11119207873119207952+3'-UTR3.622395.23915K562IGF2BP1
chr11119207113119207185+3'-UTR,CDS3.525085.60662HepG2PCBP2
chr11119207748119207832+3'-UTR4.663505.09622HepG2IGF2BP1
chr11119207878119207928+3'-UTR5.191308.38949K562IGF2BP2
chr11119207482119207549+3'-UTR3.744464.20072K562IGF2BP1
chr11119207928119207989+3'-UTR5.4029810.22819K562IGF2BP2
chr11119207760119207828+3'-UTR3.7573510.65182K562IGF2BP2
chr11119207732119207814+3'-UTR4.242754.04453HepG2IGF2BP3
chr11119207160119207177+3'-UTR4.273803.76295K562IGF2BP2
chr11119205386119205433+5'-UTR6.7869718.73760HepG2DDX3X
chr11119205542119205578+5'-UTR6.4414812.70669HepG2DDX3X
chr11119205687119205742+5'-UTR3.622395.23915K562IGF2BP1
chr11119205271119205330+5'-UTR4.3977510.10446K562DDX3X
chr11119205315119205381+5'-UTR5.7444930.49862HepG2DDX3X
chr11119205627119205672+5'-UTR4.654666.85999K562IGF2BP2
chr11119205701119205724+5'-UTR4.543538.30191HepG2DDX3X
chr11119205287119205365+5'-UTR4.065708.77920K562GEMIN5
chr11119205756119205791+5'-UTR4.955803.39700HepG2PCBP2
chr11119205471119205538+5'-UTR5.0151228.37973HepG2DDX3X
chr11119205266119205365+5'-UTR3.155186.12126HepG2EIF3D
chr11119205830119205846+5'-UTR,CDS4.864436.75419HepG2DDX3X
chr11119205627119205687+5'-UTR3.891676.02664K562DDX3X
chr11119205283119205377+5'-UTR3.494603.28588HepG2DHX30
chr11119205490119205519+5'-UTR3.974514.09351K562IGF2BP2
chr11119205496119205538+5'-UTR3.907765.23852K562DDX3X
chr11119205764119205863+5'-UTR,CDS4.7883115.33556K562IGF2BP1
chr11119205278119205315+5'-UTR7.3141926.32935HepG2DDX3X
chr11119205687119205732+5'-UTR3.372997.28096K562DDX3X
chr11119205652119205739+5'-UTR3.740775.80709K562PCBP1
chr11119205635119205752+5'-UTR4.5600513.25507HepG2PCBP2
chr11119205693119205733+5'-UTR3.232685.09613K562IGF2BP2
chr11119205581119205667+5'-UTR3.555974.05694K562IGF2BP1
chr11119206670119206694+CDS4.895777.10189K562IGF2BP2
chr11119206694119206713+CDS4.846007.10189K562IGF2BP2
chr11119205846119205900+CDS5.9391213.24386HepG2DDX3X
chr11119206991119207053+CDS3.928594.51666K562RBM15
chr11119205914119205979+CDS3.337453.93266K562FTO
chr11119205915119205957+CDS5.8057117.66846HepG2DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RNF26 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RNF26 is not available on ENCORE database.

  • 108 RBPs can affect the levels of RNF26.  








The Knockdown/knockout RNA-Seq assay for RNF26 is not available on ENCORE database.





108 RBPs can affect the gene expression of RNF26 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RNF26ENSG00000173456.4617.68400920.55500-0.575605.504704.04010HepG2AATF
RNF26ENSG00000173456.41329.970701662.55740-0.322004.616903.86930HepG2ACO1
RNF26ENSG00000173456.41275.182401934.24060-0.601105.401104.68740HepG2AKAP1
RNF26ENSG00000173456.41248.899401670.28900-0.419406.627205.49290HepG2AKAP8L
RNF26ENSG00000173456.4925.306701600.31940-0.790409.305207.92250HepG2ASCC1
RNF26ENSG00000173456.41632.366102211.78680-0.438207.758006.70130HepG2AUH
RNF26ENSG00000173456.41530.099802127.67070-0.475605.245304.45320HepG2BOP1
RNF26ENSG00000173456.4887.908801692.57880-0.9307011.8981010.48070HepG2CALR
RNF26ENSG00000173456.41126.856301520.44670-0.432203.568202.69820HepG2CIRBP
RNF26ENSG00000173456.41009.330501662.10040-0.7196020.5362019.09380HepG2CKAP4
RNF26ENSG00000173456.41168.549401953.30930-0.7412010.370309.12400HepG2CPSF6
RNF26ENSG00000173456.4594.73230942.78330-0.664704.747602.81520HepG2CSTF2T
RNF26ENSG00000173456.41213.508001654.78170-0.447506.455505.55210HepG2CELF1
RNF26ENSG00000173456.4707.516501015.08260-0.520804.951904.07160HepG2DDX21
RNF26ENSG00000173456.4735.87010993.80790-0.433503.914102.81520HepG2DDX24
RNF26ENSG00000173456.41122.545802218.12900-0.982607.741006.15090HepG2DDX59
RNF26ENSG00000173456.41149.337401591.97030-0.470003.469602.78500HepG2DDX6
RNF26ENSG00000173456.41370.036501590.59210-0.215302.073601.47450HepG2DKC1
RNF26ENSG00000173456.4861.786201106.26310-0.360302.490301.43730HepG2EFTUD2
RNF26ENSG00000173456.4554.20550935.14020-0.754806.091604.45710HepG2AGO1
RNF26ENSG00000173456.4954.092301529.88640-0.681207.407906.47290HepG2EIF2S1
RNF26ENSG00000173456.4780.060101077.26680-0.465703.481102.47430HepG2EIF3D
RNF26ENSG00000173456.4531.743701646.37010-1.6305015.6544014.10050HepG2EIF4B
RNF26ENSG00000173456.41038.669701755.36550-0.7570017.9732016.22930HepG2EIF4G1
RNF26ENSG00000173456.41250.262301681.50340-0.427503.777002.83490HepG2EIF4G2
RNF26ENSG00000173456.41681.167102539.46900-0.5951015.4550014.22310HepG2ETF1
RNF26ENSG00000173456.41849.765302522.49140-0.447503.638002.76320HepG2FIP1L1
RNF26ENSG00000173456.41100.023901582.49520-0.524704.522703.68090HepG2G3BP1
RNF26ENSG00000173456.41350.951801680.53790-0.314902.084601.31870HepG2G3BP2
RNF26ENSG00000173456.41602.658602214.20560-0.466303.899503.15030HepG2GPKOW
RNF26ENSG00000173456.41273.443201635.15550-0.360704.645503.48480HepG2HNRNPA2B1
RNF26ENSG00000173456.4971.042801241.45740-0.354402.687202.00320HepG2HNRNPC
RNF26ENSG00000173456.41408.262001620.61100-0.202602.144501.54130HepG2HNRNPL
RNF26ENSG00000173456.41555.381902113.05930-0.442104.022803.27880HepG2HNRNPLL
RNF26ENSG00000173456.41299.578801740.15430-0.421204.885803.66410HepG2HNRNPM
RNF26ENSG00000173456.41137.071201608.43120-0.500303.340502.60480HepG2IGF2BP2
RNF26ENSG00000173456.4896.873201510.00950-0.751602.412901.50260HepG2IGF2BP3
RNF26ENSG00000173456.4910.244101618.06980-0.829908.140606.33770HepG2KHSRP
RNF26ENSG00000173456.41932.246902475.66220-0.357502.170801.44330HepG2LARP4
RNF26ENSG00000173456.41651.395502041.13220-0.305702.950302.11540HepG2MSI2
RNF26ENSG00000173456.41355.124501714.04370-0.339003.075301.79250HepG2NAA15
RNF26ENSG00000173456.41217.974501564.01030-0.360802.507101.81700HepG2PABPC4
RNF26ENSG00000173456.41288.137601636.40830-0.345204.577103.82960HepG2PCBP1
RNF26ENSG00000173456.4610.035601040.45160-0.770202.269101.32590HepG2PCBP2
RNF26ENSG00000173456.41136.83800890.881300.351603.242301.90780HepG2PKM
RNF26ENSG00000173456.41547.842201099.954100.492704.131203.24740HepG2PPIL4
RNF26ENSG00000173456.41098.903201694.51060-0.6248013.3352011.82940HepG2PRPF4
RNF26ENSG00000173456.4451.12780891.54020-0.982803.174602.31510HepG2PRPF8
RNF26ENSG00000173456.41271.456701665.17140-0.389205.342504.63380HepG2PTBP1
RNF26ENSG00000173456.41230.949801684.12570-0.452204.729603.97560HepG2PUF60
RNF26ENSG00000173456.41264.075201787.82500-0.5001011.1963010.17130HepG2PUM1
RNF26ENSG00000173456.41299.349001786.48720-0.459305.756604.80090HepG2PUM2
RNF26ENSG00000173456.41493.551101803.28370-0.271902.503201.90380HepG2QKI
RNF26ENSG00000173456.4527.281001003.54360-0.928502.911602.19000HepG2RAVER1
RNF26ENSG00000173456.42057.254602562.29660-0.316702.656001.81350HepG2RBM15
RNF26ENSG00000173456.41089.811402122.51750-0.9617027.4083026.11330HepG2RBM22
RNF26ENSG00000173456.41143.148101636.64800-0.517706.292305.31250HepG2RBM25
RNF26ENSG00000173456.41495.741801853.12210-0.309103.774403.16140HepG2NELFE
RNF26ENSG00000173456.4737.252401048.27770-0.507805.227604.41310HepG2RPS19
RNF26ENSG00000173456.4955.256401240.83750-0.377402.452401.69520HepG2RPS2
RNF26ENSG00000173456.4394.55950881.83450-1.160303.937703.01960HepG2RRP9
RNF26ENSG00000173456.41408.014501098.246800.358405.191104.35820HepG2SAFB2
RNF26ENSG00000173456.41505.934802091.49810-0.473905.079704.14640HepG2SF3B1
RNF26ENSG00000173456.41096.003301733.54220-0.6615014.3621013.17710HepG2SF3B4
RNF26ENSG00000173456.41343.303002327.16310-0.792806.630705.41230HepG2SNRNP70
RNF26ENSG00000173456.41078.367302397.28990-1.1526051.6863050.23450HepG2SRFBP1
RNF26ENSG00000173456.41430.303601809.49020-0.339304.567003.99730HepG2SRSF1
RNF26ENSG00000173456.41666.562702250.49650-0.433402.990901.94300HepG2SRSF3
RNF26ENSG00000173456.41336.220101662.89020-0.315503.770303.06080HepG2SRSF5
RNF26ENSG00000173456.41287.252301489.65200-0.210701.921501.33050HepG2SRSF7
RNF26ENSG00000173456.4849.627101472.15750-0.7930019.9666018.73260HepG2SRSF9
RNF26ENSG00000173456.41142.855702081.38830-0.8649028.1558026.90670HepG2SSB
RNF26ENSG00000173456.4340.164401151.34500-1.759005.592104.68350HepG2SUPV3L1
RNF26ENSG00000173456.41020.507301626.57180-0.6725012.3282011.27390HepG2TAF15
RNF26ENSG00000173456.41391.839602059.63880-0.565406.760805.69500HepG2TARDBP
RNF26ENSG00000173456.4611.786301198.23560-0.9698019.2552018.15390HepG2TIAL1
RNF26ENSG00000173456.4899.526402157.59540-1.2622028.2031026.12770HepG2U2AF1
RNF26ENSG00000173456.4366.19470679.96670-0.892902.610301.87400HepG2UCHL5
RNF26ENSG00000173456.4817.514201663.23420-1.0247034.3444032.45450HepG2UPF1
RNF26ENSG00000173456.41122.946401605.78300-0.516009.489808.48860HepG2UTP3
RNF26ENSG00000173456.41131.932501672.22670-0.5630012.8370011.56420HepG2ZC3H8
RNF26ENSG00000173456.41358.964601829.23530-0.428709.082008.23760HepG2ZNF622
RNF26ENSG00000173456.42354.510601542.824300.6098011.0392010.00060K562AGGF1
RNF26ENSG00000173456.42143.691101695.433800.338303.272502.18100K562AKAP8
RNF26ENSG00000173456.42087.522901605.404000.378803.912003.13360K562AKAP8L
RNF26ENSG00000173456.43053.171701683.633400.8586014.9838013.77020K562AQR
RNF26ENSG00000173456.42346.070901684.503100.477805.841704.45390K562ATP5C1
RNF26ENSG00000173456.41094.572501455.22140-0.410904.440403.44680K562CPSF6
RNF26ENSG00000173456.41286.403502046.61090-0.6699016.3844014.91980K562DDX47
RNF26ENSG00000173456.42094.443201727.370600.277903.468102.47170K562DKC1
RNF26ENSG00000173456.41196.47050919.817500.379303.626702.12190K562EWSR1
RNF26ENSG00000173456.4710.18500930.16200-0.389302.513601.44620K562FKBP4
RNF26ENSG00000173456.4242.75830509.55520-1.069708.976307.55410K562G3BP2
RNF26ENSG00000173456.41261.115101632.98100-0.372802.830601.74530K562HNRNPA1
RNF26ENSG00000173456.41368.09720956.398600.516405.831704.09170K562HNRNPF
RNF26ENSG00000173456.41278.51170776.159600.719904.148102.78210K562IGF2BP2
RNF26ENSG00000173456.42037.736701703.645900.258202.488301.71010K562KIF1C
RNF26ENSG00000173456.41574.838001086.365900.535605.098202.99260K562LIN28B
RNF26ENSG00000173456.41348.89390955.165400.497905.329203.11660K562LSM11
RNF26ENSG00000173456.41038.24350815.047800.349102.024901.30130K562MAGOH
RNF26ENSG00000173456.42068.089201630.880500.342503.528702.26800K562MAK16
RNF26ENSG00000173456.41072.40770813.293100.398902.314701.47710K562MATR3
RNF26ENSG00000173456.42469.433401908.526200.371603.721102.63980K562MBNL1
RNF26ENSG00000173456.41396.510601054.554600.405102.880001.41740K562NUSAP1
RNF26ENSG00000173456.41194.37850797.020800.583504.104002.44170K562PCBP1
RNF26ENSG00000173456.41395.893101045.578200.416804.081202.29120K562PHF6
RNF26ENSG00000173456.41301.52170960.159300.438804.152103.01350K562PSIP1
RNF26ENSG00000173456.42082.932802437.16920-0.226602.292301.32880K562PUM1
RNF26ENSG00000173456.42171.221101591.938900.447602.896702.34350K562PUS1
RNF26ENSG00000173456.42110.159601551.254900.443805.848405.01330K562RBM15
RNF26ENSG00000173456.4992.90160758.992900.387502.064201.34330K562RBM22
RNF26ENSG00000173456.4619.06890947.30640-0.613704.779003.70370K562RPS19
RNF26ENSG00000173456.41435.43570830.598300.7892011.436308.97980K562SRFBP1
RNF26ENSG00000173456.41464.161901114.333300.393803.724002.47510K562SRSF4
RNF26ENSG00000173456.41065.51540733.455100.538704.009302.70460K562SRSF5
RNF26ENSG00000173456.41436.941901850.37610-0.364803.005601.58200K562SSRP1
RNF26ENSG00000173456.41179.47530757.868000.638006.143104.85420K562TIA1
RNF26ENSG00000173456.41243.41860744.074900.740705.682703.98920K562TRA2A
RNF26ENSG00000173456.41659.50640981.292600.7579011.135608.96860K562TRIM56
RNF26ENSG00000173456.4356.84760509.95350-0.515104.096803.11980K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RNF26 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RNF26 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RNF26 is not avaliable on ENCORE database.