RAPGEF1

General Information

Gene Name       : RAPGEF1
Gene ID             : ENSG00000107263.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RAPGEF1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RAPGEF1ENSG00000107263.1822.5636.3529.45ENCSR000AEF
HepG2RAPGEF1ENSG00000107263.1820.4015.1917.79ENCSR985KAT
K562RAPGEF1ENSG00000107263.1819.2517.9218.59ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RAPGEF1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RAPGEF1 RNA is bound by 26 proteins.  







eCLIP assay for RAPGEF1 is not avaliable on ENCORE database.





26 proteins are bound to RAPGEF1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr9134452947134453047-3'-UTR,intron-Distal3.9080318.20390K562UPF1
chr9134454718134454806-3'-UTR,intron-Distal4.6552916.84322HepG2UPF1
chr9134454287134454356-3'-UTR,intron-Distal4.266577.72256HepG2AKAP1
chr9134454237134454305-3'-UTR,intron-Distal4.4146212.76076K562UPF1
chr9134454257134454327-3'-UTR,intron-Distal4.6549916.38595HepG2UPF1
chr9134454216134454287-3'-UTR,intron-Distal5.253807.79013HepG2AKAP1
chr9134454141134454216-3'-UTR,intron-Distal5.015328.06720HepG2AKAP1
chr9134453805134453864-3'-UTR,intron-Distal4.3458712.41920K562UPF1
chr9134453900134453955-3'-UTR,intron-Distal5.019635.62523K562AKAP1
chr9134453419134453474-3'-UTR,intron-Distal4.2918910.72130K562UPF1
chr9134454542134454609-3'-UTR,intron-Distal3.7244313.33286K562UPF1
chr9134453807134453873-3'-UTR,intron-Distal4.7329011.81485HepG2UPF1
chr9134454205134454257-3'-UTR,intron-Distal3.8889510.90748HepG2UPF1
chr9134453684134453753-3'-UTR,intron-Distal4.428499.06961HepG2UPF1
chr9134453874134453944-3'-UTR,intron-Distal5.091328.61963HepG2AKAP1
chr9134452970134453072-3'-UTR,intron-Distal4.3985614.06114HepG2AKAP1
chr9134453204134453265-3'-UTR,intron-Distal5.5645012.73103HepG2UPF1
chr9134452214134452308-3'-UTR,intron-Distal5.8923120.20848K562PUM2
chr9134453876134453940-3'-UTR,intron-Distal5.228947.21030HepG2UPF1
chr9134453195134453265-3'-UTR,intron-Distal3.1532211.80844K562UPF1
chr9134454392134454460-3'-UTR,intron-Distal5.6754914.10191HepG2UPF1
chr9134454126134454184-3'-UTR,intron-Distal4.317609.32514HepG2UPF1
chr9134452887134452932-3'-UTR,intron-Distal3.651258.33876K562UPF1
chr9134452878134452930-3'-UTR,intron-Distal5.091388.57616HepG2UPF1
chr9134452957134453010-3'-UTR,intron-Distal3.372754.28624HepG2DDX55
chr9134452992134453053-3'-UTR,intron-Distal4.379583.52477K562AKAP1
chr9134453546134453615-3'-UTR,intron-Distal5.7504213.92550HepG2UPF1
chr9134454305134454388-3'-UTR,intron-Distal4.4391717.32502K562UPF1
chr9134453058134453139-3'-UTR,intron-Distal5.8463925.37700K562UPF1
chr9134453213134453272-3'-UTR,intron-Distal3.321274.88668HepG2AKAP1
chr9134454879134454917-3'-UTR,CDS,intron-Distal3.139634.04703HepG2FXR2
chr9134454401134454439-3'-UTR,intron-Distal5.5748211.21630K562UPF1
chr9134452959134453057-3'-UTR,intron-Distal4.0719313.95092HepG2UPF1
chr9134454524134454598-3'-UTR,intron-Distal5.0150516.83940HepG2UPF1
chr9134453814134453850-3'-UTR,intron-Distal4.079673.33639K562METAP2
chr9134454021134454074-3'-UTR,intron-Distal5.0971413.35513K562UPF1
chr9134453967134453999-3'-UTR,intron-Distal4.671205.94150HepG2UPF1
chr9134615246134615328-5'-UTR,intron-Distal3.442657.01329HepG2FXR2
chr9134615315134615417-5'-UTR,intron-Distal,intron-Proximal4.176724.25489HepG2NCBP2
chr9134615313134615442-5'-UTR,intron-Distal,intron-Proximal4.3362014.51058HepG2DDX3X
chr9134615304134615366-5'-UTR,intron-Distal,intron-Proximal4.349225.08521K562GEMIN5
chr9134615205134615313-5'-UTR,CDS,intron-Distal4.5682716.80562HepG2DDX3X
chr9134454939134455028-CDS,intron-Distal4.619168.59849K562FXR2
chr9134526211134526309-CDS,intron-Distal3.872796.02304HepG2GRWD1
chr9134454939134455002-CDS,intron-Distal4.095945.04816K562FXR1
chr9134503963134504018-CDS,intron-Distal4.640224.92107K562FXR2
chr9134501611134501709-CDS,intron-Distal4.824605.17013K562RBM15
chr9134503464134503509-CDS,intron-Distal,intron-Proximal4.035845.26367K562AQR
chr9134477467134477503-CDS,intron-Distal,intron-Proximal3.095903.35127HepG2FXR2
chr9134615097134615161-CDS,intron-Distal4.546525.32906HepG2AQR
chr9134464242134464345-CDS,intron-Distal4.174485.24452HepG2PPIG
chr9134514142134514203-CDS,intron-Distal,intron-Proximal3.105614.18806HepG2U2AF2
chr9134503876134503938-CDS,intron-Distal,intron-Proximal5.4703712.70303K562AQR
chr9134459621134459679-intron-Distal,intron-Proximal5.378176.41139HepG2EFTUD2
chr9134461723134461783-intron-Distal5.067225.62492K562EIF4G2
chr9134580100134580163-intron-Distal3.435106.55166HepG2PTBP1
chr9134610868134610931-intron-Distal3.760703.30664K562NONO
chr9134462410134462500-intron-Distal5.879609.50986K562EIF4G2
chr9134580112134580168-intron-Distal5.144335.81225K562PTBP1
chr9134600438134600575-intron-Distal4.135238.95102HepG2HNRNPL
chr9134488351134488399-intron-Distal4.030803.45219HepG2RBFOX2
chr9134503871134503934-intron-Distal,intron-Proximal4.456244.62947HepG2AQR
chr9134588508134588627-intron-Distal4.056003.06347K562NONO
chr9134461574134461680-intron-Distal6.074129.50986K562EIF4G2
chr9134462019134462095-intron-Distal5.403738.53131K562EIF4G2
chr9134503849134503911-intron-Distal,intron-Proximal4.704035.27173HepG2PRPF8
chr9134609365134609431-intron-Distal4.264104.51735HepG2QKI
chr9134517071134517127-intron-Distal4.411833.37054HepG2XPO5
chr9134582121134582177-intron-Distal4.156613.27946HepG2HNRNPM
chr9134610777134610868-intron-Distal4.018413.57432K562NONO
chr9134488902134489040-intron-Distal4.026763.57018HepG2HNRNPK
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RAPGEF1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RAPGEF1 is not available on ENCORE database.

  • 125 RBPs can affect the levels of RAPGEF1.  








The Knockdown/knockout RNA-Seq assay for RAPGEF1 is not available on ENCORE database.





125 RBPs can affect the gene expression of RAPGEF1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RAPGEF1ENSG00000107263.14903.752103022.59530-1.7418016.6921015.49870HepG2AKAP1
RAPGEF1ENSG00000107263.141470.402101026.711600.518103.871102.82430HepG2BCLAF1
RAPGEF1ENSG00000107263.142191.664301216.818300.8488014.7160013.48800HepG2BOP1
RAPGEF1ENSG00000107263.141982.242502367.43160-0.256204.040203.26540HepG2CKAP4
RAPGEF1ENSG00000107263.14650.894801742.21300-1.420405.267404.20910HepG2CNOT7
RAPGEF1ENSG00000107263.141837.501101117.080700.717909.445608.24720HepG2CPSF6
RAPGEF1ENSG00000107263.141301.971801008.129100.368904.054802.82010HepG2YBX3
RAPGEF1ENSG00000107263.14551.67160729.78850-0.403702.944601.83710HepG2CSTF2
RAPGEF1ENSG00000107263.141192.435001517.65430-0.347904.021603.27310HepG2CELF1
RAPGEF1ENSG00000107263.141270.790801631.70950-0.360705.803104.78530HepG2DAZAP1
RAPGEF1ENSG00000107263.141800.657802190.07540-0.282504.450403.42460HepG2DDX19B
RAPGEF1ENSG00000107263.141840.234901087.034400.759406.579704.68190HepG2DDX27
RAPGEF1ENSG00000107263.141591.504502895.00760-0.863206.902505.95670HepG2DDX3X
RAPGEF1ENSG00000107263.142225.892201268.535300.811105.043003.73570HepG2DDX59
RAPGEF1ENSG00000107263.142539.550902007.417800.339102.878301.84730HepG2DDX5
RAPGEF1ENSG00000107263.141481.292002487.83700-0.748005.385404.54970HepG2DDX6
RAPGEF1ENSG00000107263.141500.75290954.731600.652408.693907.05690HepG2DHX30
RAPGEF1ENSG00000107263.141542.38600989.854100.639809.685008.43450HepG2DNAJC21
RAPGEF1ENSG00000107263.141349.11690981.190600.459308.405707.34600HepG2DNAJC2
RAPGEF1ENSG00000107263.141080.777301405.31470-0.378802.873001.93550HepG2EEF2
RAPGEF1ENSG00000107263.143871.930202390.659700.695509.139308.10030HepG2EIF2S1
RAPGEF1ENSG00000107263.142876.652901542.162600.8993016.8185014.93740HepG2EIF4G2
RAPGEF1ENSG00000107263.14697.503401019.71020-0.547906.650604.81430HepG2FAM120A
RAPGEF1ENSG00000107263.141950.423702622.10550-0.426903.208702.38590HepG2FIP1L1
RAPGEF1ENSG00000107263.141508.498601816.64870-0.268202.233301.51970HepG2FUBP3
RAPGEF1ENSG00000107263.141904.479902472.88930-0.376801.956601.39300HepG2G3BP1
RAPGEF1ENSG00000107263.142025.728301266.230000.677807.282806.27490HepG2GPKOW
RAPGEF1ENSG00000107263.142566.311401568.850200.7099020.2049018.51310HepG2HNRNPF
RAPGEF1ENSG00000107263.141835.674802505.74730-0.448902.452101.79210HepG2HNRNPK
RAPGEF1ENSG00000107263.142652.203201208.392801.1340022.7276021.20210HepG2HNRNPLL
RAPGEF1ENSG00000107263.14912.965801808.73930-0.9864019.4015017.28590HepG2HNRNPM
RAPGEF1ENSG00000107263.14758.410401104.25330-0.542008.483307.46380HepG2HNRNPU
RAPGEF1ENSG00000107263.141614.941202936.44660-0.862608.842106.70190HepG2HSPD1
RAPGEF1ENSG00000107263.142685.581601544.869200.7976017.7623016.10670HepG2IGF2BP1
RAPGEF1ENSG00000107263.143872.697502513.375400.623607.690306.62230HepG2IGF2BP2
RAPGEF1ENSG00000107263.14920.527001127.95380-0.293203.628902.79930HepG2ILF2
RAPGEF1ENSG00000107263.141802.996902164.64020-0.263704.147902.91200HepG2KIF1C
RAPGEF1ENSG00000107263.142070.356102934.52130-0.503203.594402.16490HepG2KRR1
RAPGEF1ENSG00000107263.143066.074402320.832000.401702.672301.85620HepG2LARP4
RAPGEF1ENSG00000107263.14829.391201193.76460-0.525402.790501.73390HepG2METAP2
RAPGEF1ENSG00000107263.142288.879401781.603800.361403.210701.89940HepG2NAA15
RAPGEF1ENSG00000107263.141486.340502745.19600-0.885106.726805.75850HepG2NCBP2
RAPGEF1ENSG00000107263.141580.905101080.236300.549305.499403.49550HepG2NIP7
RAPGEF1ENSG00000107263.141690.362102782.90070-0.719303.733802.07640HepG2NKRF
RAPGEF1ENSG00000107263.142145.835201618.007400.407205.702804.61540HepG2NOL12
RAPGEF1ENSG00000107263.141327.823801071.520600.309302.121001.46290HepG2NSUN2
RAPGEF1ENSG00000107263.142989.647701592.985200.908107.219105.73990HepG2PABPC1
RAPGEF1ENSG00000107263.143624.731802443.923900.568606.137105.07380HepG2PABPC4
RAPGEF1ENSG00000107263.14775.870401092.98960-0.494406.890105.64950HepG2PARN
RAPGEF1ENSG00000107263.141820.400902495.77850-0.455205.974705.13610HepG2PCBP1
RAPGEF1ENSG00000107263.141548.38460984.901200.652605.098104.12630HepG2PPIL4
RAPGEF1ENSG00000107263.14894.205101549.62580-0.793206.261104.49470HepG2PRPF6
RAPGEF1ENSG00000107263.141890.708502539.70610-0.425706.156605.40380HepG2PTBP1
RAPGEF1ENSG00000107263.142128.122001544.568800.462304.527703.78660HepG2PUF60
RAPGEF1ENSG00000107263.141924.694201638.447700.232202.090301.50240HepG2PUM2
RAPGEF1ENSG00000107263.14861.229301422.23970-0.723704.396903.51970HepG2RAVER1
RAPGEF1ENSG00000107263.141251.681802149.14840-0.7799018.0344016.94490HepG2RBM22
RAPGEF1ENSG00000107263.142113.351402632.56910-0.316903.804303.09710HepG2RECQL
RAPGEF1ENSG00000107263.143543.542101690.041801.0680025.3566023.72480HepG2RPLP0
RAPGEF1ENSG00000107263.141541.62380983.371200.6485015.4661014.12810HepG2SAFB2
RAPGEF1ENSG00000107263.141490.928101113.941300.420403.020202.03570HepG2SERBP1
RAPGEF1ENSG00000107263.141545.739401196.030900.369903.030702.29320HepG2SF3B1
RAPGEF1ENSG00000107263.142073.331102643.87830-0.350704.096203.40010HepG2SF3B4
RAPGEF1ENSG00000107263.141996.648301481.094800.430809.443508.26960HepG2SLBP
RAPGEF1ENSG00000107263.14750.505201330.80820-0.826403.995203.04770HepG2SNRNP70
RAPGEF1ENSG00000107263.142136.165302427.41330-0.184401.954701.51170HepG2SRFBP1
RAPGEF1ENSG00000107263.141404.219402759.75230-0.9748022.9916021.91460HepG2SRSF1
RAPGEF1ENSG00000107263.142194.261201541.344800.5094010.683309.46850HepG2SRSF7
RAPGEF1ENSG00000107263.143070.323902245.305100.4514011.0810010.10560HepG2SRSF9
RAPGEF1ENSG00000107263.141916.292802926.60310-0.610905.380403.65810HepG2SSRP1
RAPGEF1ENSG00000107263.142214.100701770.025100.322902.502201.60500HepG2SUPT6H
RAPGEF1ENSG00000107263.141794.018401156.590100.633205.561704.65470HepG2SUPV3L1
RAPGEF1ENSG00000107263.14783.823802480.89410-1.6623044.3617042.46530HepG2TAF15
RAPGEF1ENSG00000107263.141815.533901177.989000.624007.706206.57340HepG2TARDBP
RAPGEF1ENSG00000107263.141546.619801072.892100.527507.384106.63810HepG2TIAL1
RAPGEF1ENSG00000107263.14839.437001082.58630-0.367003.658903.02950HepG2TRIM56
RAPGEF1ENSG00000107263.141983.894801509.053200.394604.497503.35110HepG2TUFM
RAPGEF1ENSG00000107263.142792.083701597.358300.805604.872803.74310HepG2UBE2L3
RAPGEF1ENSG00000107263.142988.047402430.547900.297802.536601.86270HepG2UPF1
RAPGEF1ENSG00000107263.14988.583501399.25530-0.501202.860801.57730HepG2XRCC5
RAPGEF1ENSG00000107263.141021.684001388.24540-0.442307.399806.38890HepG2ZC3H8
RAPGEF1ENSG00000107263.141377.972201686.13400-0.291203.616302.98330K562AGGF1
RAPGEF1ENSG00000107263.141409.967601852.69480-0.394003.888502.68120K562AKAP8
RAPGEF1ENSG00000107263.141047.690501754.47140-0.7438011.4591010.00350K562AKAP8L
RAPGEF1ENSG00000107263.141432.303001840.81100-0.362004.637803.41990K562ATP5C1
RAPGEF1ENSG00000107263.141450.44110941.142100.623908.279805.93390K562BCCIP
RAPGEF1ENSG00000107263.141337.30610909.479100.556109.531307.73140K562BCLAF1
RAPGEF1ENSG00000107263.141245.00410861.061200.531904.855403.68720K562BOP1
RAPGEF1ENSG00000107263.141156.212902015.11170-0.8015014.4888011.86990K562CCDC124
RAPGEF1ENSG00000107263.141369.41460795.140500.7842011.081308.77400K562CIRBP
RAPGEF1ENSG00000107263.141824.420801272.532600.519602.684401.64350K562CNOT7
RAPGEF1ENSG00000107263.141911.524301525.706800.325103.951802.61970K562CPEB4
RAPGEF1ENSG00000107263.141433.64090915.529600.646909.302507.84550K562CPSF6
RAPGEF1ENSG00000107263.141280.21280797.453100.682808.242405.97430K562DDX27
RAPGEF1ENSG00000107263.143197.996901579.128701.0179042.1327039.88540K562DDX47
RAPGEF1ENSG00000107263.14647.89680868.37240-0.422504.287002.54690K562DDX6
RAPGEF1ENSG00000107263.141616.397301888.10890-0.224202.321301.52870K562DKC1
RAPGEF1ENSG00000107263.141110.89990843.130200.397802.806201.88670K562EFTUD2
RAPGEF1ENSG00000107263.141177.96960940.811300.324203.581802.18640K562EIF2S1
RAPGEF1ENSG00000107263.141780.303701438.085500.307903.531402.73380K562EIF2S2
RAPGEF1ENSG00000107263.141623.50790751.324101.1115010.487108.50500K562EIF3A
RAPGEF1ENSG00000107263.141849.23260902.546201.0348013.9433011.46270K562EIF3D
RAPGEF1ENSG00000107263.141067.99490574.489700.8945016.6455014.61940K562EIF3G
RAPGEF1ENSG00000107263.142709.125402044.623600.405906.756705.31060K562EIF4G2
RAPGEF1ENSG00000107263.141057.56100789.618600.421403.018902.05960K562FTO
RAPGEF1ENSG00000107263.141393.13060930.588000.582009.731108.67790K562FXR1
RAPGEF1ENSG00000107263.14257.60800480.70670-0.900005.502104.42850K562G3BP2
RAPGEF1ENSG00000107263.141172.82910845.314100.472303.510701.87670K562GEMIN5
RAPGEF1ENSG00000107263.141507.503601238.269100.283702.736501.60280K562GLRX3
RAPGEF1ENSG00000107263.141147.39930874.085100.392403.213902.36050K562GPKOW
RAPGEF1ENSG00000107263.142494.338501916.287200.380204.043903.13250K562GRSF1
RAPGEF1ENSG00000107263.14958.08630752.602300.348202.578401.48240K562HNRNPF
RAPGEF1ENSG00000107263.14790.466401370.30330-0.7937015.5323013.51780K562HNRNPU
RAPGEF1ENSG00000107263.141192.95520742.144200.684706.047404.28060K562IGF2BP2
RAPGEF1ENSG00000107263.14950.32930754.760300.332302.404101.31550K562IGF2BP3
RAPGEF1ENSG00000107263.141240.331401862.02880-0.586107.715506.16800K562KIF1C
RAPGEF1ENSG00000107263.141204.39590854.859400.494504.039302.19170K562LIN28B
RAPGEF1ENSG00000107263.141374.37860779.714800.8177013.3624011.39210K562MAGOH
RAPGEF1ENSG00000107263.141114.49050778.095100.518305.756704.35650K562MATR3
RAPGEF1ENSG00000107263.141495.19890853.213200.8093013.0698011.09460K562METAP2
RAPGEF1ENSG00000107263.142161.032501301.867900.7310019.2291017.38110K562MTPAP
RAPGEF1ENSG00000107263.14890.535401462.07680-0.715306.281404.74960K562NAA15
RAPGEF1ENSG00000107263.14960.46980762.286800.333302.657801.33760K562PCBP1
RAPGEF1ENSG00000107263.14614.847601045.12930-0.765404.267401.98300K562PRPF6
RAPGEF1ENSG00000107263.141313.21190757.560500.7936013.3833011.97630K562PTBP1
RAPGEF1ENSG00000107263.141310.567701740.15060-0.409003.348902.76000K562PUS1
RAPGEF1ENSG00000107263.14282.40710458.56280-0.699302.692501.30130K562RAVER1
RAPGEF1ENSG00000107263.141078.929801695.35180-0.652009.424508.35360K562RBM15
RAPGEF1ENSG00000107263.141064.95160726.273700.552105.600204.35410K562RBM22
RAPGEF1ENSG00000107263.14932.13600708.082600.396502.724601.35980K562RBM34
RAPGEF1ENSG00000107263.14931.74820689.484600.434303.740402.58690K562RCC2
RAPGEF1ENSG00000107263.141033.17770764.318800.434702.404001.39830K562NELFE
RAPGEF1ENSG00000107263.141835.06320835.600201.1348016.8108014.77580K562RPS19
RAPGEF1ENSG00000107263.141415.59190665.072201.089709.781607.77440K562RPS3
RAPGEF1ENSG00000107263.141239.96690838.743500.563903.731002.16640K562RRP9
RAPGEF1ENSG00000107263.141813.051801427.289200.345004.391103.38160K562SF3A3
RAPGEF1ENSG00000107263.14897.34110653.600300.457103.617602.39640K562SRFBP1
RAPGEF1ENSG00000107263.142284.142601462.280700.6433018.5040016.39680K562SRPK2
RAPGEF1ENSG00000107263.141375.02580742.689800.8885015.7732014.09020K562SRSF1
RAPGEF1ENSG00000107263.14883.35770641.901100.460503.021501.90980K562SRSF4
RAPGEF1ENSG00000107263.141392.28100794.142500.809909.084807.19210K562SUPV3L1
RAPGEF1ENSG00000107263.141134.76800751.590200.594305.997804.92740K562TARDBP
RAPGEF1ENSG00000107263.141101.31910725.009500.603107.545406.09140K562TIA1
RAPGEF1ENSG00000107263.14990.23820726.720200.446303.158502.15380K562TIAL1
RAPGEF1ENSG00000107263.14286.10990465.50370-0.702203.120901.94830K562U2AF1
RAPGEF1ENSG00000107263.142120.419801533.804100.467108.975707.77320K562UPF1
RAPGEF1ENSG00000107263.141898.451501353.310500.488204.109502.63750K562UTP3
RAPGEF1ENSG00000107263.141717.167201312.435300.387704.000002.94190K562WDR3
RAPGEF1ENSG00000107263.142084.692901364.728200.6111016.3250014.51010K562WDR43
RAPGEF1ENSG00000107263.142431.073301919.964100.340403.247201.83780K562WRN
RAPGEF1ENSG00000107263.141273.43950856.187400.572603.778902.28700K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RAPGEF1 is not available on ENCORE database.





12 RBPs can affect the splicing of RAPGEF1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERAPGEF1ENSG00000107263.14chr9-134525515134525629134518625134518804134526196134526336-0.254000.000120.00370excludedK562SRSF1
SERAPGEF1ENSG00000107263.14chr9-134525515134525629134518625134518804134526196134526336-0.382000.000000.00000excludedHepG2RBM22
SERAPGEF1ENSG00000107263.14chr9-134525515134525629134518625134518804134526196134526336-0.307000.000190.00853excludedK562AKAP8L
SERAPGEF1ENSG00000107263.14chr9-1345255151345256291345186251345188041345261961345263360.214000.000300.06620includedHepG2ILF3
SERAPGEF1ENSG00000107263.14chr9-1345255151345256291345186251345188041345261961345263360.236000.000030.00643includedHepG2DDX59
SERAPGEF1ENSG00000107263.14chr9-1345255151345256531345186251345188041345261961345263360.323000.005190.05476includedHepG2U2AF2
SERAPGEF1ENSG00000107263.14chr9-1344738071344739301344735851344736971344774471344775360.091000.000000.00005includedK562AQR
SERAPGEF1ENSG00000107263.14chr9-134525515134525629134518625134518804134526196134526336-0.294000.000040.00108excludedK562PUS1
SERAPGEF1ENSG00000107263.14chr9-1344944371344945961344775001344775361344971821344973850.201000.000000.00001includedHepG2PTBP1
SERAPGEF1ENSG00000107263.14chr9-1344944371344945961344775001344775361344971821344973850.112000.001790.06436includedHepG2MATR3
SERAPGEF1ENSG00000107263.14chr9-1344944371344945961344775001344775361344971821344973850.087000.002490.05201includedHepG2SRSF1
SERAPGEF1ENSG00000107263.14chr9-134525515134525629134518625134518804134526196134526336-0.210000.000610.01713excludedHepG2SRSF1
SERAPGEF1ENSG00000107263.14chr9-1344738071344739301344735851344736971344774471344775360.071000.000060.00455includedHepG2SF3B4
SERAPGEF1ENSG00000107263.14chr9-134525515134525629134518625134518804134526196134526336-0.363000.000120.00497excludedK562RBM15
A3SSRAPGEF1ENSG00000107263.14chr9-1345255151345256531345255151345256291345261961345263360.235000.000000.00000longerHepG2U2AF2
A3SSRAPGEF1ENSG00000107263.14chr9-1344556491344558341344556491344557781344579911344580890.229000.000000.00000longerK562AQR
A3SSRAPGEF1ENSG00000107263.14chr9-1345255151345256711345255151345256291345261961345263360.100000.002450.01542longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RAPGEF1 is not avaliable on ENCORE database.