PPRC1

General Information

Gene Name       : PPRC1
Gene ID             : ENSG00000148840.10
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: PPRC1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PPRC1ENSG00000148840.1026.5738.0132.29ENCSR000AEF
HepG2PPRC1ENSG00000148840.1036.7931.9834.38ENCSR985KAT
K562PPRC1ENSG00000148840.1031.8031.6631.73ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PPRC1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PPRC1 RNA is bound by 18 proteins.  







eCLIP assay for PPRC1 is not avaliable on ENCORE database.





18 proteins are bound to PPRC1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr10103901269103901305+5'-UTR,CDS3.904565.41633K562PCBP1
chr10103901262103901325+5'-UTR,CDS4.182673.48187K562RBM15
chr10103901240103901287+5'-UTR,CDS3.928444.73155HepG2RBM15
chr10103901264103901319+5'-UTR,CDS3.245023.60809HepG2HNRNPK
chr10103901269103901305+5'-UTR,CDS3.226343.34920HepG2HLTF
chr10103900920103900964+CDS5.708428.19722HepG2PCBP2
chr10103900866103900957+CDS3.698735.65930HepG2RBM15
chr10103902810103902855+CDS3.797644.13746HepG2PPIG
chr10103900894103900938+CDS5.936785.82558K562PCBP1
chr10103906482103906539+CDS,intron-Distal3.977123.11282HepG2G3BP1
chr10103897776103897802+CDS,intron-Proximal3.398693.86355HepG2PPIG
chr10103902740103902842+CDS,intron-Proximal4.561994.27476HepG2AQR
chr10103900335103900401+CDS3.014734.37238K562YBX3
chr10103897644103897736+CDS4.635435.12780HepG2G3BP1
chr10103900988103901197+CDS4.4108628.73051HepG2PCBP2
chr10103900836103900916+CDS3.499546.84506HepG2HNRNPK
chr10103899529103899615+CDS4.856115.60278HepG2FXR2
chr10103909071103909124+CDS,intron-Proximal4.6628014.46261HepG2PRPF8
chr10103909682103909697+CDS,intron-Proximal3.657383.02850K562YBX3
chr10103899791103899844+CDS3.830995.31703HepG2EIF3H
chr10103908907103908978+CDS,intron-Proximal5.092935.69951K562AQR
chr10103908694103908707+CDS,intron-Proximal5.116075.26064K562AQR
chr10103900579103900629+CDS3.920633.11168K562ZNF622
chr10103901016103901103+CDS5.154187.59520K562PCBP1
chr10103900717103900768+CDS3.882976.67001HepG2RBM15
chr10103908907103908969+CDS,intron-Proximal5.323769.27403HepG2PRPF8
chr10103900830103900900+CDS3.137899.33084HepG2PCBP2
chr10103907133103907188+CDS,intron-Distal,intron-Proximal3.344674.22621HepG2PRPF8
chr10103908946103908994+CDS3.991313.12746HepG2GRWD1
chr10103901152103901218+CDS4.073353.73926K562RBM15
chr10103908692103908781+CDS,intron-Proximal4.631424.22101K562PRPF8
chr10103892883103892980+CDS,intron-Proximal3.329985.89426HepG2NCBP2
chr10103908690103908740+CDS,intron-Proximal4.7152111.25775HepG2PRPF8
chr10103897790103897886+CDS,intron-Proximal5.704128.43521K562AQR
chr10103899448103899472+CDS4.643793.81516HepG2EIF3H
chr10103900856103900977+CDS4.485604.47904K562HNRNPK
chr10103901143103901183+CDS3.865803.17235HepG2HNRNPK
chr10103897780103897834+CDS,intron-Proximal5.6100911.80896HepG2PRPF8
chr10103904027103904111+CDS,intron-Proximal3.360526.60804HepG2PRPF8
chr10103907174103907266+intron-Distal,intron-Proximal4.234654.21433K562PRPF8
chr10103893407103893505+intron-Distal3.848025.16644HepG2FAM120A
chr10103902888103902992+intron-Distal,intron-Proximal3.362735.76899HepG2EFTUD2
chr10103908478103908568+intron-Proximal5.100585.02942K562EFTUD2
chr10103908482103908524+intron-Proximal3.451234.88058HepG2RBM22
chr10103908707103908767+intron-Proximal5.432626.04760K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PPRC1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PPRC1 is not available on ENCORE database.

  • 106 RBPs can affect the levels of PPRC1.  








The Knockdown/knockout RNA-Seq assay for PPRC1 is not available on ENCORE database.





106 RBPs can affect the gene expression of PPRC1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PPRC1ENSG00000148840.61178.63600889.241200.406402.443401.94030HepG2AKAP1
PPRC1ENSG00000148840.61306.848001912.70070-0.5495011.148009.92630HepG2AUH
PPRC1ENSG00000148840.6646.94680967.23990-0.580204.141903.06150HepG2BCLAF1
PPRC1ENSG00000148840.61540.512701872.82320-0.281802.081001.55690HepG2BOP1
PPRC1ENSG00000148840.6841.480801171.73680-0.477603.591902.72870HepG2CALR
PPRC1ENSG00000148840.61401.594901156.517400.277203.504802.77220HepG2CKAP4
PPRC1ENSG00000148840.6586.437501068.08420-0.865006.363105.20340HepG2CNOT7
PPRC1ENSG00000148840.61227.427001719.37090-0.486204.676603.80370HepG2CPSF6
PPRC1ENSG00000148840.6534.73200840.44140-0.652304.456002.58640HepG2CSTF2T
PPRC1ENSG00000148840.61130.47430870.389200.377103.829902.47960HepG2DDX1
PPRC1ENSG00000148840.6642.90060905.03350-0.493404.274803.44940HepG2DDX21
PPRC1ENSG00000148840.6632.93940885.98500-0.485204.524303.34520HepG2DDX24
PPRC1ENSG00000148840.61179.345701952.46630-0.727304.388603.16940HepG2DDX59
PPRC1ENSG00000148840.6749.621801106.67630-0.562005.635704.73200HepG2DKC1
PPRC1ENSG00000148840.62071.978401343.937800.624406.790105.04310HepG2EIF2S2
PPRC1ENSG00000148840.61136.34950777.353000.547704.198603.41580HepG2EIF4A3
PPRC1ENSG00000148840.61693.98760756.888601.1622013.8090012.33690HepG2EIF4B
PPRC1ENSG00000148840.6947.682701270.40920-0.422803.530702.61980HepG2EIF4G2
PPRC1ENSG00000148840.61526.257702196.10970-0.5250010.721109.66330HepG2ETF1
PPRC1ENSG00000148840.6605.65280911.06040-0.589105.221003.52060HepG2FKBP4
PPRC1ENSG00000148840.61166.32980784.358500.572305.075504.15880HepG2FXR1
PPRC1ENSG00000148840.61161.82830772.454000.588805.446304.18270HepG2G3BP2
PPRC1ENSG00000148840.61377.981501949.08790-0.500204.242803.46170HepG2GPKOW
PPRC1ENSG00000148840.6765.55700958.41130-0.324102.121001.50460HepG2HNRNPC
PPRC1ENSG00000148840.61594.165401807.37350-0.181101.939101.33220HepG2HNRNPF
PPRC1ENSG00000148840.61590.88570736.797601.1104019.9821018.25650HepG2HNRNPK
PPRC1ENSG00000148840.61135.369101860.04620-0.712208.957707.89710HepG2HNRNPLL
PPRC1ENSG00000148840.61474.061301779.73150-0.271902.655301.94490HepG2IGF2BP1
PPRC1ENSG00000148840.61217.64750739.566900.719207.631806.56620HepG2IGF2BP2
PPRC1ENSG00000148840.61206.68510972.518200.311204.371503.46960HepG2ILF2
PPRC1ENSG00000148840.61157.92970743.892600.638304.698803.35820HepG2KHSRP
PPRC1ENSG00000148840.61350.50860784.632500.783308.968507.80080HepG2MAGOH
PPRC1ENSG00000148840.61730.38110789.017201.1329016.6099015.16210HepG2MATR3
PPRC1ENSG00000148840.61114.435501896.90260-0.767305.814204.38390HepG2MTPAP
PPRC1ENSG00000148840.61466.58810807.597400.8607010.388009.20160HepG2NCBP2
PPRC1ENSG00000148840.61650.541101332.984500.308203.071702.26860HepG2NOL12
PPRC1ENSG00000148840.61328.270301649.25250-0.312302.268601.58940HepG2NSUN2
PPRC1ENSG00000148840.61416.06010719.192700.9773013.5334011.96410HepG2PABPC4
PPRC1ENSG00000148840.61169.38290942.419200.311203.250802.33950HepG2PARN
PPRC1ENSG00000148840.61526.83650770.002200.9875018.2005016.86370HepG2PCBP1
PPRC1ENSG00000148840.6602.24660844.10520-0.487103.834502.90310HepG2PRPF8
PPRC1ENSG00000148840.61050.76450783.488200.423405.224604.52170HepG2PTBP1
PPRC1ENSG00000148840.6867.113201272.44190-0.553306.299605.44870HepG2PUF60
PPRC1ENSG00000148840.61899.064101350.743200.4914011.5294010.49210HepG2PUM1
PPRC1ENSG00000148840.61742.400301349.762800.368303.997903.19640HepG2PUM2
PPRC1ENSG00000148840.6940.713601178.19660-0.324803.857403.15330HepG2PUS1
PPRC1ENSG00000148840.61029.72780770.122000.419003.654302.88610HepG2RBM25
PPRC1ENSG00000148840.61442.54430962.519600.583603.424002.31540HepG2RBM27
PPRC1ENSG00000148840.61043.47640871.962000.259002.084301.60070HepG2NELFE
PPRC1ENSG00000148840.61215.46860812.087300.581709.348508.31540HepG2RECQL
PPRC1ENSG00000148840.61051.547401947.21530-0.8889016.3412014.95310HepG2RPLP0
PPRC1ENSG00000148840.61114.49850795.946400.485604.863504.07470HepG2RPS19
PPRC1ENSG00000148840.6754.617501073.01840-0.507903.121102.27280HepG2RPS3A
PPRC1ENSG00000148840.61035.57180798.809500.374402.564101.65760HepG2SERBP1
PPRC1ENSG00000148840.62684.539201698.753800.660102.565101.91560HepG2SF3A3
PPRC1ENSG00000148840.61293.89860815.744300.6654012.1101011.01090HepG2SF3B4
PPRC1ENSG00000148840.61176.47840988.790900.250602.806702.15910HepG2SMN1
PPRC1ENSG00000148840.61367.79930935.420400.548103.792402.65900HepG2SMNDC1
PPRC1ENSG00000148840.61496.50470776.600000.946303.223801.78600HepG2SNRNP200
PPRC1ENSG00000148840.61792.096602073.13210-0.210202.578402.08830HepG2SRFBP1
PPRC1ENSG00000148840.61264.58780851.447400.570609.342608.58890HepG2SRSF1
PPRC1ENSG00000148840.61468.565301980.95860-0.431802.847101.82990HepG2SRSF3
PPRC1ENSG00000148840.61535.089201256.339000.289003.364202.68570HepG2SRSF5
PPRC1ENSG00000148840.61317.531401775.73810-0.430607.661106.59840HepG2SRSF7
PPRC1ENSG00000148840.6937.06740692.686600.435903.212702.62690HepG2SRSF9
PPRC1ENSG00000148840.61092.194801799.92230-0.7207019.0555017.96810HepG2SSB
PPRC1ENSG00000148840.62003.861601428.813800.4879010.525209.44410HepG2SUCLG1
PPRC1ENSG00000148840.6541.116601089.61440-1.0098012.7731011.49810HepG2SUPV3L1
PPRC1ENSG00000148840.61048.45310765.278000.454105.188304.46060HepG2TAF15
PPRC1ENSG00000148840.61060.59320703.224600.592707.144205.81260HepG2TIA1
PPRC1ENSG00000148840.61276.08310933.384900.451106.932006.10970HepG2TRIM56
PPRC1ENSG00000148840.61679.593001243.105400.434104.793703.61140HepG2TUFM
PPRC1ENSG00000148840.62032.277901530.319800.409203.665602.94650HepG2U2AF1
PPRC1ENSG00000148840.62153.83390903.843901.252704.745703.42970HepG2U2AF2
PPRC1ENSG00000148840.61703.262901315.796800.372302.565701.75960HepG2UBE2L3
PPRC1ENSG00000148840.61176.679601506.53290-0.356505.127704.22300HepG2UPF1
PPRC1ENSG00000148840.6737.49440997.49990-0.435702.591601.62130HepG2UPF2
PPRC1ENSG00000148840.62985.015301454.501401.0371046.6698044.65670HepG2UTP3
PPRC1ENSG00000148840.6906.016201501.94220-0.7292019.1160017.63160HepG2ZC3H8
PPRC1ENSG00000148840.62053.294301656.900600.309405.470404.76820HepG2ZNF622
PPRC1ENSG00000148840.61516.974601228.390800.304302.510901.39180K562AARS
PPRC1ENSG00000148840.61017.576701177.68070-0.210801.898401.41130K562AGGF1
PPRC1ENSG00000148840.61049.659101293.97820-0.301902.373101.47410K562AKAP8
PPRC1ENSG00000148840.62733.559201901.240500.523706.125005.31110K562AQR
PPRC1ENSG00000148840.61264.185001742.32910-0.462804.313203.21600K562BOP1
PPRC1ENSG00000148840.61769.869401311.939800.431804.137902.79520K562CCAR1
PPRC1ENSG00000148840.61603.589401957.72510-0.287902.844701.31560K562CEBPZ
PPRC1ENSG00000148840.61272.015901852.51890-0.542407.566706.26520K562CPSF6
PPRC1ENSG00000148840.63469.634802386.161800.540002.747902.09930K562DDX47
PPRC1ENSG00000148840.61652.612601318.797400.325403.514802.51040K562DKC1
PPRC1ENSG00000148840.61591.965802147.28970-0.431707.078106.00550K562EIF2S2
PPRC1ENSG00000148840.62397.963801334.457300.845506.795205.16690K562EIF3A
PPRC1ENSG00000148840.61305.27580562.494201.2143031.6331028.94270K562EIF3G
PPRC1ENSG00000148840.61618.66670788.282901.0379014.8604012.88830K562EIF4A3
PPRC1ENSG00000148840.61011.59470709.857700.510906.255304.39250K562EIF4B
PPRC1ENSG00000148840.61414.488601885.04270-0.414302.125801.37220K562FMR1
PPRC1ENSG00000148840.61250.713501597.80830-0.353302.550201.67510K562FTO
PPRC1ENSG00000148840.61682.68960819.775001.0374028.9687027.14710K562FXR1
PPRC1ENSG00000148840.6223.54520453.49830-1.020505.306804.25620K562G3BP2
PPRC1ENSG00000148840.61411.299701768.63820-0.325602.696601.91240K562GPKOW
PPRC1ENSG00000148840.62201.660502861.26600-0.378104.315403.37510K562GRSF1
PPRC1ENSG00000148840.61708.300802884.97330-0.756004.680403.65230K562HSPD1
PPRC1ENSG00000148840.61125.931501510.35760-0.423802.585301.68670K562KRR1
PPRC1ENSG00000148840.61371.18490688.749600.9933012.6004010.71240K562MAGOH
PPRC1ENSG00000148840.61169.33380687.274300.7666011.542709.54810K562MATR3
PPRC1ENSG00000148840.6923.51470612.722800.591805.976304.52370K562PCBP2
PPRC1ENSG00000148840.61653.516502394.77840-0.534402.759801.93010K562PCBP3
PPRC1ENSG00000148840.61351.185801836.73430-0.442902.253701.53070K562POLR2G
PPRC1ENSG00000148840.61451.40990669.201801.1168015.8574014.33510K562PTBP1
PPRC1ENSG00000148840.6966.176301215.46460-0.331102.340201.83220K562PUS1
PPRC1ENSG00000148840.61068.52680641.404000.736209.231407.55520K562RBM22
PPRC1ENSG00000148840.62804.307701637.021700.7765012.2441010.10140K562SAFB
PPRC1ENSG00000148840.6801.46090471.164600.766307.210705.78980K562SF3B4
PPRC1ENSG00000148840.61249.56920656.098500.9293016.5030014.78350K562SRSF1
PPRC1ENSG00000148840.6943.98630697.684100.436103.643202.41160K562SRSF4
PPRC1ENSG00000148840.61705.142802008.17810-0.236002.587801.45880K562SRSF7
PPRC1ENSG00000148840.62673.918301842.489200.537204.343903.30860K562SYNCRIP
PPRC1ENSG00000148840.61050.10450663.890300.661407.027605.84970K562TARDBP
PPRC1ENSG00000148840.6818.57350640.429800.354002.181701.46260K562TIA1
PPRC1ENSG00000148840.61585.413401231.481300.364403.208502.17330K562TRIM56
PPRC1ENSG00000148840.62309.195702913.12680-0.335205.113603.37670K562TROVE2
PPRC1ENSG00000148840.6787.54890453.685300.7956010.758509.16400K562U2AF2
PPRC1ENSG00000148840.6952.276301328.23250-0.480104.365103.05890K562UCHL5
PPRC1ENSG00000148840.61439.622501917.43670-0.413502.310901.50940K562WDR3
PPRC1ENSG00000148840.62424.978001993.768500.282402.586701.76580K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PPRC1 is not available on ENCORE database.





15 RBPs can affect the splicing of PPRC1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPPRC1ENSG00000148840.6chr10+103904776103904847103902801103902855103906428103907149-0.211000.000230.00346excludedK562AQR
SEPPRC1ENSG00000148840.6chr10+103904776103904847103898856103901761103906428103907149-0.268000.005860.07025excludedK562PUS1
SEPPRC1ENSG00000148840.6chr10+103902801103902855103901511103901761103904006103904064-0.189000.000540.08630excludedK562GPKOW
SEPPRC1ENSG00000148840.6chr10+103904776103904847103902801103902855103906428103907149-0.111000.004480.09701excludedHepG2SF3A3
SEPPRC1ENSG00000148840.6chr10+103904776103904847103902801103902855103906428103907149-0.164000.003860.07651excludedK562AGGF1
A3SSPPRC1ENSG00000148840.6chr10+103909682103909937103909697103909937103908934103909086-0.230000.000180.01366shorterK562SF3B4
A3SSPPRC1ENSG00000148840.6chr10+1039088991039090861039089341039090861039085731039086950.053000.001170.00799longerK562AQR
A3SSPPRC1ENSG00000148840.6chr10+1039081001039082781039081281039082781039064281039071490.113000.000000.00004longerK562AQR
A3SSPPRC1ENSG00000148840.6chr10+1038983101038985221038983751038985221038976061038977950.142000.000070.00060longerK562AQR
MXEPPRC1ENSG00000148840.6chr10+1038983991038985221038986351038987371038976061038977951038988561039017610.092000.005840.080691includedHepG2U2AF1
MXEPPRC1ENSG00000148840.6chr10+1039040061039040641039064281039071491039028011039028551039081281039082780.278000.004220.057521includedK562SRSF1
MXEPPRC1ENSG00000148840.6chr10+1039028011039028551039040061039040641038988561039017611039047761039048470.260000.000050.004431includedK562SF3B1
MXEPPRC1ENSG00000148840.6chr10+103904776103904847103906428103907149103904006103904064103908128103908278-0.175000.000880.093682includedK562UTP3
MXEPPRC1ENSG00000148840.6chr10+1038983481038985221038986351038987371038976061038977951038988561039017610.091000.001740.014751includedK562AQR
MXEPPRC1ENSG00000148840.6chr10+1039026861039028551039047761039048471038988561039017611039064281039071490.184000.000000.000071includedK562AQR
MXEPPRC1ENSG00000148840.6chr10+1038983101038985221038986351038987371038976061038977951038988561039017610.098000.000650.006281includedK562AQR
MXEPPRC1ENSG00000148840.6chr10+1039028011039028551039047761039048471038988561039017611039064281039071490.210000.000420.019451includedHepG2SF3A3
MXEPPRC1ENSG00000148840.6chr10+1039028011039028551039040061039040641038988561039017611039047761039048470.189000.003060.078221includedHepG2SF3A3
MXEPPRC1ENSG00000148840.6chr10+103904006103904064103906428103907149103902801103902855103908128103908278-0.178000.000310.015362includedHepG2SF3A3
MXEPPRC1ENSG00000148840.6chr10+1039028011039028551039047761039048471038988561039017611039064281039071490.169000.000060.000691includedHepG2U2AF2
MXEPPRC1ENSG00000148840.6chr10+1039028011039028551039040061039040641038988561039017611039047761039048470.264000.000990.008111includedHepG2U2AF2
MXEPPRC1ENSG00000148840.6chr10+103904006103904064103906428103907149103902801103902855103908128103908278-0.247000.004550.028222includedHepG2U2AF2
MXEPPRC1ENSG00000148840.6chr10+1039028011039028551039047761039048471038988561039017611039064281039071490.174000.000370.009101includedHepG2HNRNPUL1
MXEPPRC1ENSG00000148840.6chr10+1039040061039040641039064281039071491038988561039017611039081281039082780.245000.001170.039851includedHepG2HNRNPC
MXEPPRC1ENSG00000148840.6chr10+103904006103904064103906428103907149103902801103902855103908128103908278-0.142000.002100.049582includedK562PPIL4
MXEPPRC1ENSG00000148840.6chr10+103904006103904064103904776103904847103902801103902855103906428103907149-0.244000.000040.044422includedHepG2PPIG
MXEPPRC1ENSG00000148840.6chr10+103904006103904064103906428103907149103902801103902855103908128103908278-0.264000.002870.042862includedK562SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PPRC1 is not avaliable on ENCORE database.