NCOA1

General Information

Gene Name       : NCOA1
Gene ID             : ENSG00000084676.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NCOA1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NCOA1ENSG00000084676.155.925.915.92ENCSR000AEF
HepG2NCOA1ENSG00000084676.155.506.756.12ENCSR985KAT
K562NCOA1ENSG00000084676.1512.5813.2312.91ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NCOA1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NCOA1 RNA is bound by 21 proteins.  







eCLIP assay for NCOA1 is not avaliable on ENCORE database.





21 proteins are bound to NCOA1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr22488153324881644+3'-UTR,5'-UTR,CDS,intron-Proximal4.147447.93461K562BUD13
chr22499289624992992+3'-UTR4.285694.86695K562IGF2BP1
chr22488162524881687+5'-UTR,CDS,intron-Proximal3.718446.14054K562PRPF8
chr22471481324714864+5'-UTR4.194423.43867K562CSTF2T
chr22471502224715129+5'-UTR,intron-Proximal3.350363.84859K562NONO
chr22488161624881671+5'-UTR,CDS,intron-Proximal4.601966.81564HepG2PRPF8
chr22493390024933949+CDS3.634623.01531K562YBX3
chr22495259024952678+CDS3.460244.70209K562YBX3
chr22490592524905965+CDS4.351883.43980K562ZNF622
chr22488863524888787+CDS,intron-Distal,intron-Proximal5.067346.71715HepG2BCLAF1
chr22496232124962369+CDS3.366864.91258K562YBX3
chr22492998524930064+CDS3.493214.63751K562IGF2BP1
chr22488864824888785+CDS,intron-Distal,intron-Proximal4.3829311.72700K562ZNF622
chr22471557924715681+intron-Distal4.511865.42395HepG2HNRNPM
chr22475900124759076+intron-Distal4.124593.90241K562MATR3
chr22478013124780276+intron-Distal3.015864.35373K562KHSRP
chr22481253524812608+intron-Distal4.187256.94650K562EIF4G2
chr22473073424730803+intron-Distal4.169356.59655K562PTBP1
chr22471533624715390+intron-Distal3.385543.50009K562CSTF2T
chr22488836424888433+intron-Distal4.382554.54401K562KHSRP
chr22475863824758664+intron-Distal3.846053.01445K562EXOSC5
chr22481245824812535+intron-Distal5.183447.07160K562EIF4G2
chr22476075524760840+intron-Distal3.450834.91684K562CSTF2T
chr22484914424849247+intron-Distal4.886246.08869K562EXOSC5
chr22488819024888256+intron-Distal3.704014.08064K562KHSRP
chr22473958424739652+intron-Distal5.346538.42544K562PTBP1
chr22475781124757877+intron-Distal4.3763013.67925K562EXOSC5
chr22471714124717176+intron-Distal4.986707.38693K562EXOSC5
chr22475658924756674+intron-Distal5.346059.68086K562EXOSC5
chr22473181024731847+intron-Distal3.846053.01445K562EXOSC5
chr22472778524727891+intron-Distal4.017773.89294K562KHSRP
chr22471687924716913+intron-Distal3.717877.56703K562EXOSC5
chr22488700324887096+intron-Distal4.767564.72162K562KHSRP
chr22474012524740192+intron-Distal3.887053.97268K562PTBP1
chr22475747024757534+intron-Distal3.152233.32889K562MATR3
chr22475712624757176+intron-Distal5.190088.69493K562EXOSC5
chr22477887724778931+intron-Distal,intron-Proximal3.746173.21003K562U2AF2
chr22471517324715238+intron-Distal4.3609313.07215K562EXOSC5
chr22471598624716049+intron-Distal3.140179.69248K562EXOSC5
chr22495052224950635+intron-Distal4.264034.76003K562KHSRP
chr22481218024812240+intron-Distal3.820743.33944K562MATR3
chr22471680424716856+intron-Distal4.0830210.31219K562EXOSC5
chr22488455524884592+intron-Distal4.445314.96658K562KHSRP
chr22480792524808026+intron-Distal3.636143.06150K562KHSRP
chr22475909424759136+intron-Distal4.338503.89085K562EXOSC5
chr22486161424861767+intron-Distal4.562555.62025K562KHSRP
chr22488825624888340+intron-Distal4.668729.63457K562KHSRP
chr22475876024758863+intron-Distal4.638546.01663K562MATR3
chr22481251324812597+intron-Distal4.447355.71021K562TARDBP
chr22482556824825665+intron-Distal3.620743.06411K562KHDRBS1
chr22478311724783177+intron-Distal3.465503.56409K562MATR3
chr22493567924935806+intron-Distal3.637963.10466K562SAFB2
chr22471659024716601+intron-Distal4.325733.59909K562EXOSC5
chr22488459224884720+intron-Distal4.4176812.50932K562KHSRP
chr22482379924823875+intron-Distal3.696293.25538K562KHSRP
chr22482339224823478+intron-Distal3.640054.30679K562KHSRP
chr22471561524715675+intron-Distal4.667504.53244K562HNRNPM
chr22489609324896195+intron-Distal,intron-Proximal3.975333.90026K562KHSRP
chr22481254924812636+intron-Distal4.041033.47525K562MATR3
chr22475748924757529+intron-Distal4.708504.80466K562EXOSC5
chr22488716324887252+intron-Distal3.309074.74253K562KHSRP
chr22478311924783179+intron-Distal3.885023.39864HepG2SUGP2
chr22471703124717094+intron-Distal4.9037913.84610K562EXOSC5
chr22471557424715630+intron-Distal4.446855.70097K562AATF
chr22475818924758245+intron-Distal4.6147710.61559K562EXOSC5
chr22471537524715441+intron-Distal4.809404.53244K562HNRNPM
chr22473644224736542+intron-Distal4.316464.92524K562TARDBP
chr22471549724715570+intron-Distal3.848164.32964K562HNRNPM
chr22475662024756683+intron-Distal4.490694.52011K562HNRNPM
chr22475781024757882+intron-Distal3.767793.29248HepG2SUGP2
chr22481253624812594+intron-Distal3.957213.86809HepG2SUGP2
chr22488669624886788+intron-Distal5.635809.95676K562PTBP1
chr22471548824715658+intron-Distal3.773496.60322K562FUS
chr22475879324758855+intron-Distal5.346059.68215K562EXOSC5
chr22479918024799271+intron-Distal4.439264.24113K562MATR3
chr22475779924757883+intron-Distal4.951906.51010K562MATR3
chr22472073524720793+intron-Distal3.410703.43875K562EXOSC5
chr22488777424887866+intron-Distal4.653726.28383K562KHSRP
chr22471554324715641+intron-Distal4.6613422.76367K562EXOSC5
chr22471916924719220+intron-Distal4.122363.12827HepG2U2AF2
chr22471536524715442+intron-Distal5.4276717.76358K562EXOSC5
chr22488491224885020+intron-Distal4.7073012.68814K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NCOA1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NCOA1 is not available on ENCORE database.

  • 97 RBPs can affect the levels of NCOA1.  








The Knockdown/knockout RNA-Seq assay for NCOA1 is not available on ENCORE database.





97 RBPs can affect the gene expression of NCOA1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NCOA1ENSG00000084676.111160.94610819.160400.503003.438802.39280HepG2ABCF1
NCOA1ENSG00000084676.11448.89400565.59800-0.333402.590801.99940HepG2ACO1
NCOA1ENSG00000084676.11639.01820837.92090-0.391002.053701.58780HepG2AKAP1
NCOA1ENSG00000084676.11937.43330693.313700.435102.991402.17530HepG2ASCC1
NCOA1ENSG00000084676.11877.66610633.708600.469804.413403.46660HepG2CALR
NCOA1ENSG00000084676.11310.54800470.41410-0.599102.713001.95650HepG2CNOT7
NCOA1ENSG00000084676.11899.89730714.593400.332502.104601.49550HepG2CPSF6
NCOA1ENSG00000084676.11661.72110523.092500.339103.188202.29750HepG2DDX19B
NCOA1ENSG00000084676.11887.01180526.441300.752608.769007.63270HepG2DDX21
NCOA1ENSG00000084676.111008.02170802.674500.328501.892501.36510HepG2DDX3X
NCOA1ENSG00000084676.111268.39790811.472300.644303.484402.38900HepG2DDX59
NCOA1ENSG00000084676.11368.47790516.63540-0.487603.286702.22250HepG2DHX30
NCOA1ENSG00000084676.11769.74010541.121400.508305.351604.46610HepG2DKC1
NCOA1ENSG00000084676.11436.53600530.97190-0.282502.021001.44710HepG2DNAJC2
NCOA1ENSG00000084676.11765.88120508.960700.589504.555903.39760HepG2EEF2
NCOA1ENSG00000084676.11850.79440621.323700.453403.710402.35800HepG2EIF2S2
NCOA1ENSG00000084676.11635.35720413.177500.620704.394903.27490HepG2EIF3D
NCOA1ENSG00000084676.11652.73460497.249800.392402.819401.72830HepG2EIF3G
NCOA1ENSG00000084676.111137.10780732.535100.634305.317004.43080HepG2EIF4A3
NCOA1ENSG00000084676.11989.78890713.204800.472702.572101.90710HepG2EIF4B
NCOA1ENSG00000084676.11879.22940608.434300.531007.079805.85190HepG2EIF4G1
NCOA1ENSG00000084676.11889.53930582.827600.609906.021704.84390HepG2EIF4G2
NCOA1ENSG00000084676.11969.20270709.532400.449803.366902.16670HepG2ESF1
NCOA1ENSG00000084676.111359.89490926.383800.553709.021508.03970HepG2ETF1
NCOA1ENSG00000084676.11578.58240739.06400-0.353201.995801.40400HepG2FXR1
NCOA1ENSG00000084676.11560.79130367.885600.608104.414703.27350HepG2GEMIN5
NCOA1ENSG00000084676.11624.28790460.862700.437802.732401.72140HepG2GNB2L1
NCOA1ENSG00000084676.111161.18320810.055300.519404.004803.24760HepG2GPKOW
NCOA1ENSG00000084676.11755.80860540.767600.482903.651002.92320HepG2HNRNPA1
NCOA1ENSG00000084676.11899.13710601.526000.579805.379304.43870HepG2HNRNPC
NCOA1ENSG00000084676.11887.71280725.150700.291702.357501.69140HepG2HNRNPF
NCOA1ENSG00000084676.111258.25590773.050000.702707.823106.82580HepG2HNRNPLL
NCOA1ENSG00000084676.111037.20450696.911500.573604.870003.99690HepG2IGF2BP2
NCOA1ENSG00000084676.111442.416401003.276300.523703.407802.01630HepG2KRR1
NCOA1ENSG00000084676.111061.32050669.329900.665007.744306.45440HepG2MSI2
NCOA1ENSG00000084676.111027.44540760.982300.433002.903002.25560HepG2NCBP2
NCOA1ENSG00000084676.11274.64220429.87390-0.646402.868501.96350HepG2PABPC1
NCOA1ENSG00000084676.111059.85140677.724600.645005.964004.91500HepG2PABPC4
NCOA1ENSG00000084676.111003.81160739.421200.440905.322704.28510HepG2PRPF4
NCOA1ENSG00000084676.11474.83510330.335100.523403.242702.37520HepG2PRPF8
NCOA1ENSG00000084676.11964.94590583.725200.725108.043907.09870HepG2PUF60
NCOA1ENSG00000084676.11989.89970619.208200.676808.707907.54960HepG2PUM2
NCOA1ENSG00000084676.11770.37880576.096800.419204.601803.84510HepG2PUS1
NCOA1ENSG00000084676.111061.50310769.221800.464505.035904.23100HepG2QKI
NCOA1ENSG00000084676.111226.71400774.286800.6638010.9125010.03230HepG2RBM22
NCOA1ENSG00000084676.111218.42890698.128800.8034012.3625010.99900HepG2RBM25
NCOA1ENSG00000084676.111251.60840781.231200.679907.852206.79260HepG2RPLP0
NCOA1ENSG00000084676.11741.76190402.027000.8836011.1877010.05180HepG2RPS19
NCOA1ENSG00000084676.11747.86730502.145500.574604.462603.45930HepG2RPS2
NCOA1ENSG00000084676.11749.52790472.107300.666804.457703.44280HepG2RPS3A
NCOA1ENSG00000084676.11408.22410532.12940-0.382403.026402.35810HepG2SAFB2
NCOA1ENSG00000084676.11650.16010403.517100.688106.097804.71950HepG2SERBP1
NCOA1ENSG00000084676.111182.49500765.171400.627906.854805.78530HepG2SF3B1
NCOA1ENSG00000084676.111184.53360851.385700.476302.438301.70610HepG2SNRNP70
NCOA1ENSG00000084676.111122.76690771.854800.540608.028307.31950HepG2SRSF1
NCOA1ENSG00000084676.11769.73320627.953300.293602.588502.05110HepG2SRSF9
NCOA1ENSG00000084676.111368.76710759.303900.8500021.6043020.46750HepG2SSB
NCOA1ENSG00000084676.11793.19480655.471000.275002.241101.67020HepG2SUCLG1
NCOA1ENSG00000084676.11786.32000558.436300.493604.195003.04960HepG2SUPT6H
NCOA1ENSG00000084676.11578.79670426.181000.441502.537201.88640HepG2SUPV3L1
NCOA1ENSG00000084676.111101.90740753.463100.548305.252004.29720HepG2TARDBP
NCOA1ENSG00000084676.111000.24090580.546200.7848012.1407011.22250HepG2TIAL1
NCOA1ENSG00000084676.11439.70590585.82470-0.413903.674403.04400HepG2TRIM56
NCOA1ENSG00000084676.11726.66870570.321200.349402.573201.73290HepG2TUFM
NCOA1ENSG00000084676.111538.91850707.503101.1210019.0303017.33040HepG2U2AF1
NCOA1ENSG00000084676.111228.461401033.267600.249502.282501.31730HepG2UTP18
NCOA1ENSG00000084676.11878.43460729.716900.267502.422301.78750HepG2ZC3H8
NCOA1ENSG00000084676.112016.993602383.95520-0.241203.019702.43050K562AGGF1
NCOA1ENSG00000084676.111800.973602480.59120-0.461905.362004.43590K562AKAP8L
NCOA1ENSG00000084676.112460.088901999.789800.298802.740401.50550K562APOBEC3C
NCOA1ENSG00000084676.112425.906001588.328900.610907.427006.54090K562AQR
NCOA1ENSG00000084676.112172.020902602.69510-0.261002.963102.01960K562ATP5C1
NCOA1ENSG00000084676.112191.467601375.909800.671408.639907.05300K562BOP1
NCOA1ENSG00000084676.111987.501001462.950700.442005.408204.31940K562CPSF6
NCOA1ENSG00000084676.113469.793402785.856700.316602.965401.95670K562CELF1
NCOA1ENSG00000084676.111119.66930884.888100.339402.857401.79790K562DDX3X
NCOA1ENSG00000084676.113884.692502124.372200.8707033.8119031.80020K562DDX47
NCOA1ENSG00000084676.112263.328102669.43370-0.238102.696801.83540K562DKC1
NCOA1ENSG00000084676.111508.08970922.746900.708606.444904.47340K562EEF2
NCOA1ENSG00000084676.111346.72380729.940700.883506.570504.96600K562EIF3A
NCOA1ENSG00000084676.112230.96250954.545301.2247020.1341017.26100K562EIF3D
NCOA1ENSG00000084676.111322.18690922.250200.519607.325606.04230K562EIF3G
NCOA1ENSG00000084676.111254.34150924.493000.440104.112303.11370K562EIF4A3
NCOA1ENSG00000084676.113677.844402266.243100.6985020.7875018.38050K562EIF4G2
NCOA1ENSG00000084676.111180.89620881.011000.422603.092701.88850K562FKBP4
NCOA1ENSG00000084676.112165.171301488.587800.540406.178204.88640K562FMR1
NCOA1ENSG00000084676.111749.657101261.742900.471604.111702.97960K562FTO
NCOA1ENSG00000084676.111335.15040961.434400.473606.631705.75250K562FXR1
NCOA1ENSG00000084676.111981.171801396.728900.504205.927304.76830K562GPKOW
NCOA1ENSG00000084676.111474.675901960.59290-0.410904.177203.25180K562GRSF1
NCOA1ENSG00000084676.111465.735301034.920400.502006.097804.53860K562HNRNPA1
NCOA1ENSG00000084676.112014.286701015.016500.9887021.5302019.94280K562HNRNPC
NCOA1ENSG00000084676.112041.820802558.48980-0.325402.217701.50280K562HSPD1
NCOA1ENSG00000084676.111818.917901192.708300.608704.920503.63170K562KRR1
NCOA1ENSG00000084676.112572.485101783.638200.528203.054501.74980K562PABPC1
NCOA1ENSG00000084676.112418.088201883.140200.360602.646801.83540K562PCBP3
NCOA1ENSG00000084676.111826.489001444.383000.338503.390102.49670K562POLR2G
NCOA1ENSG00000084676.111233.921702141.93000-0.795707.990406.43400K562PPIG
NCOA1ENSG00000084676.11651.61860910.05220-0.481903.777802.69760K562PSIP1
NCOA1ENSG00000084676.113328.113802472.728600.428504.591403.54490K562PUF60
NCOA1ENSG00000084676.113224.821302629.522700.294303.952402.65610K562PUM1
NCOA1ENSG00000084676.111876.185102460.22560-0.391003.778603.15790K562PUS1
NCOA1ENSG00000084676.111851.947402396.98680-0.372205.036604.25800K562RBM15
NCOA1ENSG00000084676.11822.032801090.12420-0.407203.366102.43430K562RBM22
NCOA1ENSG00000084676.111136.58880883.702100.363002.138201.42470K562RPS19
NCOA1ENSG00000084676.112502.803301656.437600.595403.803701.93730K562RPS3A
NCOA1ENSG00000084676.111639.833601306.411800.327802.292401.39190K562RPS3
NCOA1ENSG00000084676.111642.558901287.136300.351703.167702.00970K562SAFB
NCOA1ENSG00000084676.111826.530301330.680100.456804.493602.62880K562SDAD1
NCOA1ENSG00000084676.111775.399801328.444400.418303.082902.05470K562SF3B1
NCOA1ENSG00000084676.112118.683501725.768500.295804.682103.50430K562SRPK2
NCOA1ENSG00000084676.111281.56790839.965700.609405.572904.09540K562SUPV3L1
NCOA1ENSG00000084676.111892.565701448.822500.385404.471203.42100K562SYNCRIP
NCOA1ENSG00000084676.111314.33380875.327600.586305.657304.27370K562TIAL1
NCOA1ENSG00000084676.111210.48680889.016000.445203.582702.41160K562UCHL5
NCOA1ENSG00000084676.112222.308301810.102300.295904.232603.36260K562UPF1
NCOA1ENSG00000084676.112026.853901548.850300.387902.850501.96090K562WDR3
NCOA1ENSG00000084676.112977.158201610.604300.8862038.1004035.67180K562WDR43
NCOA1ENSG00000084676.112471.110601881.804100.392904.388902.75350K562WRN
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NCOA1 is not available on ENCORE database.





4 RBPs can affect the splicing of NCOA1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENCOA1ENSG00000084676.11chr2+249908932499100424985555249856452499108924991186-0.354000.000650.09986excludedK562APOBEC3C
SENCOA1ENSG00000084676.11chr2+249909472499100424985555249856452499108924991186-0.375000.000790.03602excludedHepG2MATR3
MXENCOA1ENSG00000084676.11chr2+24888617248887842489623424896332248815292488163524905819249059970.135000.000000.000181includedK562DROSHA
MXENCOA1ENSG00000084676.11chr2+24888617248887842489623424896332248815292488163524905819249059970.078000.005250.065111includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NCOA1 is not avaliable on ENCORE database.