MYO1D

General Information

Gene Name       : MYO1D
Gene ID             : ENSG00000176658.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MYO1D)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MYO1DENSG00000176658.1617.0020.1518.57ENCSR000AEF
HepG2MYO1DENSG00000176658.1613.4713.0713.27ENCSR985KAT
K562MYO1DENSG00000176658.1636.3345.8141.07ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MYO1D is not avaliable on ENCORE database.



Proteins bound to RNA
  • MYO1D RNA is bound by 32 proteins.  







eCLIP assay for MYO1D is not avaliable on ENCORE database.





32 proteins are bound to MYO1D RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr173081992630819993-3'-UTR,intron-Distal4.501344.77725HepG2GRSF1
chr173082155030821633-3'-UTR,intron-Distal4.480215.43223K562PCBP1
chr173082136030821441-3'-UTR,intron-Distal,intron-Proximal4.694866.20043HepG2UPF1
chr173082014330820242-3'-UTR,intron-Distal4.4101211.26012K562IGF2BP1
chr173082040630820458-3'-UTR,intron-Distal3.9531610.16051K562UPF1
chr173081990630819983-3'-UTR,intron-Distal5.8088926.18636K562UPF1
chr173082026030820327-3'-UTR,intron-Distal3.467874.84679K562IGF2BP1
chr173082046530820538-3'-UTR,intron-Distal5.0464820.63412K562UPF1
chr173081972830819869-3'-UTR,intron-Distal5.2283942.67144K562UPF1
chr173082021730820310-3'-UTR,intron-Distal4.261494.20997HepG2UPF1
chr173082137330821577-3'-UTR,intron-Distal,intron-Proximal3.002075.66768K562IGF2BP2
chr173082155030821623-3'-UTR,intron-Distal3.9575918.88837K562UPF1
chr173082151030821638-3'-UTR,intron-Distal,intron-Proximal5.5854212.60888K562IGF2BP1
chr173082086430820884-3'-UTR,intron-Distal4.9575912.17194K562UPF1
chr173082121630821258-3'-UTR,intron-Distal5.2126114.54319K562UPF1
chr173082150930821608-3'-UTR,intron-Distal3.126334.66189HepG2UPF1
chr173082171430821791-3'-UTR,CDS,intron-Distal,intron-Proximal4.308225.01757K562IGF2BP2
chr173082108330821132-3'-UTR,intron-Distal3.692363.19539K562YBX3
chr173082089630820971-3'-UTR,intron-Distal4.261494.20997HepG2UPF1
chr173082129230821360-3'-UTR,intron-Distal4.276494.49605HepG2UPF1
chr173082107730821116-3'-UTR,intron-Distal4.8782112.67045K562UPF1
chr173082025330820340-3'-UTR,intron-Distal4.6682523.49339K562UPF1
chr173082095330821010-3'-UTR,intron-Distal4.7873617.87293K562UPF1
chr173082001730820111-3'-UTR,intron-Distal4.772627.30074K562IGF2BP1
chr173082034830820406-3'-UTR,intron-Distal4.3463914.26407K562UPF1
chr173082080130820838-3'-UTR,intron-Distal3.607423.66583K562AKAP1
chr173082017130820253-3'-UTR,intron-Distal4.6054331.54112K562UPF1
chr173106537231065414-5'-UTR,CDS,intron-Distal,intron-Proximal3.519813.50696K562BUD13
chr173120383131204147-5'-UTR,CDS,intron-Distal4.3010416.57094K562FXR2
chr173106536831065447-5'-UTR,CDS,intron-Distal,intron-Proximal4.386654.93985K562GPKOW
chr173110761431107659-5'-UTR,CDS,intron-Distal4.406384.34038HepG2BCLAF1
chr173120395031204045-5'-UTR,intron-Distal4.1324410.12922K562FMR1
chr173106527031065323-5'-UTR,CDS,intron-Distal,intron-Proximal3.220614.29172K562YBX3
chr173120389031203950-5'-UTR,intron-Distal3.384475.47305K562FMR1
chr173120390831203960-5'-UTR,intron-Distal3.099083.67697K562YBX3
chr173120406131204124-5'-UTR,intron-Distal3.766236.30673HepG2DDX3X
chr173106536431065404-5'-UTR,CDS,intron-Distal,intron-Proximal4.261623.38968HepG2BCLAF1
chr173108730531087397-CDS,intron-Distal,intron-Proximal3.482385.15776HepG2BCLAF1
chr173108262231082749-CDS,intron-Distal,intron-Proximal3.038676.11915K562AQR
chr173110549431105591-CDS,intron-Distal,intron-Proximal3.462508.74800HepG2BCLAF1
chr173103904631039173-CDS,intron-Distal4.419053.90287K562LIN28B
chr173108261631082737-CDS,intron-Distal,intron-Proximal4.4509014.49260K562BUD13
chr173110299331103055-CDS,intron-Distal,intron-Proximal3.415933.13705K562BUD13
chr173110555231105592-CDS,intron-Distal,intron-Proximal4.870764.17466K562DDX24
chr173098621130986293-CDS,intron-Distal3.585955.81266K562FXR2
chr173108253931082686-CDS,intron-Distal,intron-Proximal3.383984.71371HepG2GRWD1
chr173108739731087423-CDS,intron-Distal,intron-Proximal4.241303.89826HepG2BCLAF1
chr173108261531082679-CDS,intron-Distal,intron-Proximal4.012876.22576HepG2BCLAF1
chr173109816531098225-CDS,intron-Distal3.984843.19539K562YBX3
chr173108749831087535-CDS,intron-Distal,intron-Proximal3.065883.94979HepG2BCLAF1
chr173098617130986211-CDS,intron-Distal4.251153.42335K562FXR2
chr173110288331103017-CDS,intron-Distal3.488138.99805HepG2BCLAF1
chr173114051031140596-intron-Distal4.540705.75812K562PTBP1
chr173114849731148582-intron-Distal3.809786.16126K562TARDBP
chr173085544930855569-intron-Distal5.581368.32644HepG2HNRNPL
chr173084160930841733-intron-Distal3.984063.55640HepG2QKI
chr173118002431180104-intron-Distal4.067537.01277K562EXOSC5
chr173107863731078712-intron-Distal4.559199.69342K562EXOSC5
chr173117895531178999-intron-Distal4.686973.59917K562EXOSC5
chr173114052631140667-intron-Distal4.762656.51010K562MATR3
chr173117839031178444-intron-Distal5.4310211.00067K562EXOSC5
chr173118359131183772-intron-Distal3.432313.56099K562TRA2A
chr173089935630899441-intron-Distal3.764843.50894K562SAFB2
chr173117796131178017-intron-Distal5.439879.68086K562EXOSC5
chr173093203430932087-intron-Distal,intron-Proximal5.6890413.85867K562KHSRP
chr173087936130879462-intron-Distal5.807418.53131K562EIF4G2
chr173118042231180495-intron-Distal4.040306.71225K562EXOSC5
chr173117994331179990-intron-Distal3.490813.72904K562EXOSC5
chr173116888731168931-intron-Distal5.024605.43236K562PTBP1
chr173120039931200498-intron-Distal4.4231710.78284K562TARDBP
chr173117810631178165-intron-Distal4.3991511.84913K562EXOSC5
chr173092737030927466-intron-Distal3.042773.06830K562SAFB2
chr173119805831198185-intron-Distal4.320004.47904K562HNRNPK
chr173107925231079297-intron-Distal5.097307.06230K562EXOSC5
chr173107230431072438-intron-Distal,intron-Proximal4.982086.73684K562KHSRP
chr173114059631140689-intron-Distal6.3596314.35804K562PTBP1
chr173101588431016016-intron-Distal3.797167.96063K562HNRNPL
chr173114060131140681-intron-Distal4.619725.75114HepG2PTBP1
chr173093199830932034-intron-Distal,intron-Proximal5.4662211.16851K562KHSRP
chr173117849131178546-intron-Distal4.066605.80937K562EXOSC5
chr173084648230846545-intron-Distal4.391513.18269HepG2XPO5
chr173087850930878588-intron-Distal4.531016.26655K562EIF4G2
chr173113990731140089-intron-Distal3.458363.69826K562TARDBP
chr173117816531178235-intron-Distal4.2394811.23387K562EXOSC5
chr173085543230855565-intron-Distal4.990218.16758K562HNRNPL
chr173108810531088209-intron-Distal3.413263.69826K562TARDBP
chr173088957130889655-intron-Distal5.6823314.33214HepG2DKC1
chr173085544930855552-intron-Distal4.606894.46189K562GTF2F1
chr173106513931065242-intron-Distal,intron-Proximal3.492464.10408K562KHSRP
chr173118330531183404-intron-Distal3.591405.10657K562SAFB2
chr173119057331190693-intron-Distal4.2830312.08764K562KHSRP
chr173101591631016024-intron-Distal4.8615910.62109HepG2HNRNPL
chr173108240731082488-intron-Distal,intron-Proximal4.474714.85612K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MYO1D is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MYO1D is not available on ENCORE database.

  • 109 RBPs can affect the levels of MYO1D.  








The Knockdown/knockout RNA-Seq assay for MYO1D is not available on ENCORE database.





109 RBPs can affect the gene expression of MYO1D :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MYO1DENSG00000176658.122087.196801612.389900.372302.586301.58020HepG2AKAP8
MYO1DENSG00000176658.121046.365501283.07430-0.294203.167002.35280HepG2AKAP8L
MYO1DENSG00000176658.122823.128301849.720700.609907.037005.81070HepG2ASCC1
MYO1DENSG00000176658.122762.059301715.639600.6869019.6295018.10570HepG2AUH
MYO1DENSG00000176658.121903.046401135.669700.7447014.1906012.67700HepG2CALR
MYO1DENSG00000176658.121196.345801757.38200-0.554805.656604.57460HepG2CIRBP
MYO1DENSG00000176658.121561.985101276.774100.290804.039003.26460HepG2CKAP4
MYO1DENSG00000176658.121454.058201093.823700.410603.361502.61160HepG2CPSF6
MYO1DENSG00000176658.121682.194301308.962800.361806.162205.11770HepG2DAZAP1
MYO1DENSG00000176658.121454.410301181.150900.300104.074203.08490HepG2DDX19B
MYO1DENSG00000176658.12451.13620981.49570-1.1214018.4304016.87250HepG2DDX21
MYO1DENSG00000176658.121274.22740961.100500.406804.017002.90300HepG2DDX24
MYO1DENSG00000176658.121555.83280794.211500.9700010.621709.22410HepG2DDX55
MYO1DENSG00000176658.122035.618801242.122200.712604.352203.13920HepG2DDX59
MYO1DENSG00000176658.121480.866701221.884100.277203.013602.31050HepG2DKC1
MYO1DENSG00000176658.121857.05930960.738100.9507026.2808024.35890HepG2DNAJC21
MYO1DENSG00000176658.12809.60840952.13450-0.233902.213101.61710HepG2DNAJC2
MYO1DENSG00000176658.121151.016901768.36580-0.619506.456005.57140HepG2EIF2S1
MYO1DENSG00000176658.12571.85430896.88780-0.649306.254704.93570HepG2EIF3D
MYO1DENSG00000176658.121062.606501954.10140-0.8789010.944509.70210HepG2EIF4A3
MYO1DENSG00000176658.121618.260001291.418300.325404.264003.26730HepG2EIF4G1
MYO1DENSG00000176658.123228.897501969.796300.7129022.5080021.07280HepG2ETF1
MYO1DENSG00000176658.121740.156001247.919400.479605.698504.49600HepG2EWSR1
MYO1DENSG00000176658.122181.087601581.451300.463703.513102.65330HepG2FIP1L1
MYO1DENSG00000176658.121239.798601972.06230-0.669607.837406.71970HepG2FXR1
MYO1DENSG00000176658.122280.942301829.137100.318402.058801.48120HepG2G3BP1
MYO1DENSG00000176658.122175.077201239.892400.8108010.220109.04480HepG2GPKOW
MYO1DENSG00000176658.121698.451701219.264500.478108.585506.97720HepG2HDGF
MYO1DENSG00000176658.12780.32810969.94090-0.313802.105001.53300HepG2HNRNPA1
MYO1DENSG00000176658.121783.770901203.000100.5682011.454709.79240HepG2HNRNPA2B1
MYO1DENSG00000176658.121212.503001005.322200.270202.508301.82440HepG2HNRNPF
MYO1DENSG00000176658.121138.446501852.72700-0.702609.395608.16910HepG2HNRNPK
MYO1DENSG00000176658.121577.977401192.348700.404207.246706.20240HepG2HNRNPL
MYO1DENSG00000176658.121537.058601183.255900.377302.846002.20840HepG2HNRNPLL
MYO1DENSG00000176658.121676.213501071.710400.6452014.7504013.44180HepG2HNRNPU
MYO1DENSG00000176658.12735.370801094.72350-0.574009.043707.79500HepG2ILF2
MYO1DENSG00000176658.121423.024401870.18960-0.394202.376701.45790HepG2KHSRP
MYO1DENSG00000176658.121430.447601167.423700.293003.998902.77720HepG2KIF1C
MYO1DENSG00000176658.121148.288901972.75280-0.780709.945308.72450HepG2MAGOH
MYO1DENSG00000176658.12751.845401279.72710-0.7673011.444609.91530HepG2MSI2
MYO1DENSG00000176658.121584.666602030.38740-0.357602.474801.87380HepG2NCBP2
MYO1DENSG00000176658.121530.831501297.967700.238002.056801.39690HepG2NOL12
MYO1DENSG00000176658.121555.43230729.580001.092107.575105.75620HepG2NONO
MYO1DENSG00000176658.121427.886301049.213200.444503.967203.07720HepG2NSUN2
MYO1DENSG00000176658.122139.384601846.655300.212202.436701.85870HepG2PCBP1
MYO1DENSG00000176658.121519.165001109.503700.453307.211306.03170HepG2PRPF4
MYO1DENSG00000176658.121929.55240612.363901.6557035.4150033.07730HepG2PRPF8
MYO1DENSG00000176658.122838.103301879.098700.5948014.8788013.80670HepG2PTBP1
MYO1DENSG00000176658.122081.004201239.038600.7480012.8393011.68270HepG2PUF60
MYO1DENSG00000176658.121807.758701314.339900.459806.112605.12820HepG2PUM2
MYO1DENSG00000176658.122142.832501300.874500.7199021.7340020.30810HepG2PUS1
MYO1DENSG00000176658.123484.627202034.987000.7759020.5102019.03410HepG2QKI
MYO1DENSG00000176658.122309.882301644.176900.490407.252805.95400HepG2RBM15
MYO1DENSG00000176658.12480.68450892.24160-0.892308.083206.28570HepG2RCC2
MYO1DENSG00000176658.121475.283801947.76350-0.400806.345405.46630HepG2RECQL
MYO1DENSG00000176658.12902.79760605.724600.575603.666602.77890HepG2RRP9
MYO1DENSG00000176658.121400.155301791.15280-0.355301.926001.36080HepG2SF3A3
MYO1DENSG00000176658.12599.463901171.16540-0.9662014.4424012.96530HepG2SF3B1
MYO1DENSG00000176658.121456.902101956.28060-0.425206.987806.11540HepG2SF3B4
MYO1DENSG00000176658.121356.368301188.080300.191001.941201.33500HepG2SLBP
MYO1DENSG00000176658.121726.634501049.574700.718103.007901.34160HepG2SLTM
MYO1DENSG00000176658.121364.351001113.065100.293603.203302.51930HepG2SMN1
MYO1DENSG00000176658.12706.153001303.13550-0.883907.164405.90080HepG2SNRNP70
MYO1DENSG00000176658.122184.933201859.523900.232602.891302.38240HepG2SRFBP1
MYO1DENSG00000176658.121575.887202041.97570-0.373805.985205.35560HepG2SRSF1
MYO1DENSG00000176658.12973.539401223.39080-0.329603.641002.94080HepG2SRSF5
MYO1DENSG00000176658.121273.87730987.710600.367004.470503.61840HepG2SRSF7
MYO1DENSG00000176658.121037.503601749.21620-0.753608.493606.42480HepG2SSRP1
MYO1DENSG00000176658.12562.23300949.92900-0.756706.383604.65200HepG2STIP1
MYO1DENSG00000176658.122001.395701391.314700.5245012.3763011.22300HepG2SUCLG1
MYO1DENSG00000176658.121326.484101067.703400.313002.233501.38480HepG2SUPT6H
MYO1DENSG00000176658.121455.44480790.536600.880508.960307.85590HepG2SUPV3L1
MYO1DENSG00000176658.121586.903101835.52480-0.210001.779501.31050HepG2TAF15
MYO1DENSG00000176658.121043.386801718.12340-0.719603.454502.26730HepG2TBRG4
MYO1DENSG00000176658.122028.699501686.472600.266402.409201.62730HepG2TIA1
MYO1DENSG00000176658.12810.029901041.51630-0.362603.236702.70250HepG2TIAL1
MYO1DENSG00000176658.121294.424301050.666300.300903.458702.84380HepG2TRIM56
MYO1DENSG00000176658.122068.314801281.331200.690707.523706.11930HepG2UBE2L3
MYO1DENSG00000176658.121248.734001588.47970-0.347204.962104.06920HepG2UPF1
MYO1DENSG00000176658.121617.51670978.044700.725706.097104.47930HepG2XPO5
MYO1DENSG00000176658.121715.540401094.900300.6478016.9607015.53850HepG2ZC3H8
MYO1DENSG00000176658.122615.512602099.812700.316702.959501.73080K562AARS
MYO1DENSG00000176658.125091.732504293.239300.246003.928803.27410K562AGGF1
MYO1DENSG00000176658.121656.567404356.91690-1.3951039.6185037.60790K562AQR
MYO1DENSG00000176658.122748.789702107.333500.383306.035503.98030K562BCCIP
MYO1DENSG00000176658.122506.619802036.400300.299604.509103.26710K562BCLAF1
MYO1DENSG00000176658.123575.180602801.574900.351703.396801.96720K562CIRBP
MYO1DENSG00000176658.124528.870203844.438400.236303.155601.96840K562CPEB4
MYO1DENSG00000176658.125152.610406164.73270-0.258703.103802.07180K562CELF1
MYO1DENSG00000176658.122989.035202186.481400.451003.495402.30750K562DDX3X
MYO1DENSG00000176658.123836.376804807.28410-0.325505.086603.84720K562DKC1
MYO1DENSG00000176658.121464.625401901.56780-0.376703.226802.23570K562EFTUD2
MYO1DENSG00000176658.121333.274902284.45260-0.776906.987005.68900K562EIF4A3
MYO1DENSG00000176658.122535.681301994.169700.346502.664601.40050K562EWSR1
MYO1DENSG00000176658.123310.073202635.102600.328903.000002.11460K562FIP1L1
MYO1DENSG00000176658.122102.532601495.211100.491704.873103.04760K562FUS
MYO1DENSG00000176658.121668.533602375.75500-0.509803.589302.91430K562FXR1
MYO1DENSG00000176658.122610.398203443.22530-0.399504.913203.90770K562GRSF1
MYO1DENSG00000176658.122990.672203572.65060-0.256502.017901.33320K562HSPD1
MYO1DENSG00000176658.123430.330002614.044300.392002.912501.85180K562IGF2BP2
MYO1DENSG00000176658.123549.221802658.813600.416604.656903.02690K562IGF2BP3
MYO1DENSG00000176658.121247.476201688.95360-0.437103.632001.91110K562ILF3
MYO1DENSG00000176658.123010.561002330.282800.369403.137701.56120K562LIN28B
MYO1DENSG00000176658.122055.785902747.19960-0.418304.929603.80040K562MAGOH
MYO1DENSG00000176658.123436.399402999.099600.196302.484901.71790K562MTPAP
MYO1DENSG00000176658.123246.888202685.407100.273802.730301.38730K562PCBP1
MYO1DENSG00000176658.121398.836501850.44970-0.403603.564202.71150K562PRPF8
MYO1DENSG00000176658.124268.115805470.02820-0.357904.295703.28510K562PUF60
MYO1DENSG00000176658.124312.204305818.51600-0.432207.475505.65050K562PUM1
MYO1DENSG00000176658.124838.077805700.70500-0.236703.202002.17020K562PUM2
MYO1DENSG00000176658.127574.081404430.510400.7735014.9075013.68840K562PUS1
MYO1DENSG00000176658.123143.786802494.851600.333402.673001.33080K562RBM34
MYO1DENSG00000176658.121564.100301879.49730-0.265002.329801.42460K562RCC2
MYO1DENSG00000176658.122568.638002069.574900.311602.444401.50970K562RPS3
MYO1DENSG00000176658.122854.527703288.12850-0.204002.238601.49920K562SF3A3
MYO1DENSG00000176658.121093.113901847.42020-0.757108.724706.92620K562SF3B1
MYO1DENSG00000176658.121706.073603434.77470-1.009506.285004.00140K562SFPQ
MYO1DENSG00000176658.121949.207402616.59560-0.424805.363904.38610K562SRSF1
MYO1DENSG00000176658.122130.068703571.67850-0.745703.963301.99880K562STIP1
MYO1DENSG00000176658.125792.837004772.633900.279403.318401.67420K562SUCLG1
MYO1DENSG00000176658.12963.057002648.15140-1.4593037.6916034.51420K562TARDBP
MYO1DENSG00000176658.123309.688302506.703400.400804.240702.84140K562TRA2A
MYO1DENSG00000176658.122558.569702104.947300.281502.330901.47400K562TRIM56
MYO1DENSG00000176658.124155.789703491.555300.251203.684402.20820K562TROVE2
MYO1DENSG00000176658.121220.428801733.67710-0.506404.300102.87330K562U2AF1
MYO1DENSG00000176658.121175.444101790.69610-0.607309.844808.32800K562U2AF2
MYO1DENSG00000176658.122708.542401896.073500.514405.499904.01880K562UCHL5
MYO1DENSG00000176658.124115.420203533.218000.220003.254402.47850K562UPF1
MYO1DENSG00000176658.124167.753703023.255500.463106.725405.32500K562WDR3
MYO1DENSG00000176658.123684.878804907.87640-0.413504.877603.68250K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MYO1D is not available on ENCORE database.





1 RBPs can affect the splicing of MYO1D :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMYO1DENSG00000176658.12chr17-310998063109986031098142310982383110288131103047-0.130000.000040.00127excludedK562SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MYO1D is not avaliable on ENCORE database.