JMJD1C

General Information

Gene Name       : JMJD1C
Gene ID             : ENSG00000171988.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: JMJD1C)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878JMJD1CENSG00000171988.1850.8243.0246.92ENCSR000AEF
HepG2JMJD1CENSG00000171988.1817.2433.7525.49ENCSR985KAT
K562JMJD1CENSG00000171988.1835.6032.3833.99ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for JMJD1C is not avaliable on ENCORE database.



Proteins bound to RNA

  • JMJD1C RNA is bound by 44 proteins.  







eCLIP assay for JMJD1C is not avaliable on ENCORE database.





44 proteins are bound to JMJD1C RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr106492704564927065-3'-UTR,intron-Distal4.440083.83835HepG2FUBP3
chr106495727664957331-3'-UTR,CDS,intron-Distal,intron-Proximal4.792564.86944K562AQR
chr106492752164927585-3'-UTR,intron-Distal3.101553.28806K562KHSRP
chr106495065464950676-3'-UTR,CDS,intron-Distal4.9501113.15686HepG2BCLAF1
chr106494321964943245-3'-UTR,CDS,intron-Distal4.6695810.19430HepG2BCLAF1
chr106494919564949205-3'-UTR,CDS,intron-Distal5.581149.78817HepG2BCLAF1
chr106495821664958274-3'-UTR,CDS,intron-Distal,intron-Proximal4.092934.98250K562AQR
chr106494899264949032-3'-UTR,CDS,intron-Distal,intron-Proximal5.3141417.45530HepG2BCLAF1
chr106493704964937107-3'-UTR,intron-Distal3.625285.22258HepG2TIAL1
chr106497696964977013-3'-UTR,CDS,intron-Distal3.3187811.76394HepG2BCLAF1
chr106495270464952766-3'-UTR,CDS,intron-Distal3.307924.10184HepG2FXR2
chr106494436764944390-3'-UTR,CDS,intron-Distal,intron-Proximal3.8351211.34372HepG2BCLAF1
chr106494893164948945-3'-UTR,CDS,intron-Distal4.605355.31233HepG2HLTF
chr106502441665024432-3'-UTR,5'-UTR,CDS,intron-Distal3.6083714.75988HepG2BCLAF1
chr106495317964953231-3'-UTR,CDS,intron-Distal,intron-Proximal4.2380015.85384HepG2BCLAF1
chr106497704964977090-3'-UTR,CDS,intron-Distal3.2242413.48662HepG2BCLAF1
chr106494436764944425-3'-UTR,CDS,intron-Distal,intron-Proximal3.241285.57447HepG2GRWD1
chr106494612164946140-3'-UTR,CDS,intron-Distal4.797026.79841HepG2HLTF
chr106493739564937447-3'-UTR,intron-Distal,intron-Proximal5.628216.13333K562RBM22
chr106495717064957230-3'-UTR,CDS,intron-Distal,intron-Proximal4.3147221.58303HepG2BCLAF1
chr106495726064957337-3'-UTR,CDS,intron-Distal,intron-Proximal3.8350814.84707HepG2U2AF2
chr106502441065024416-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.3955411.44176HepG2BCLAF1
chr106493617364936230-3'-UTR,CDS,intron-Distal5.2230421.87871HepG2BCLAF1
chr106495727664957338-3'-UTR,CDS,intron-Distal,intron-Proximal3.555655.70176HepG2AQR
chr106492743364927489-3'-UTR,intron-Distal5.0460322.63537K562PUM2
chr106495406764954118-3'-UTR,CDS,intron-Distal3.6469410.50604HepG2BCLAF1
chr106495284764952959-3'-UTR,CDS,intron-Distal,intron-Proximal4.089427.90970K562KHSRP
chr106495839864958420-3'-UTR,CDS,intron-Distal3.705668.66838HepG2BCLAF1
chr106494328964943335-3'-UTR,CDS,intron-Distal,intron-Proximal4.053613.12827HepG2U2AF2
chr106494907264949096-3'-UTR,CDS,intron-Distal4.627859.47159HepG2BCLAF1
chr106494439064944415-3'-UTR,CDS,intron-Distal4.2105715.37934HepG2BCLAF1
chr106494892864949054-3'-UTR,CDS,intron-Distal,intron-Proximal4.329583.66349K562LIN28B
chr106493704564937105-3'-UTR,intron-Distal3.666483.03597HepG2TIA1
chr106492738764927433-3'-UTR,intron-Distal4.2600716.91921K562PUM2
chr106494611664946144-3'-UTR,CDS,intron-Distal,intron-Proximal4.310873.87995K562UCHL5
chr106494437364944411-3'-UTR,CDS,intron-Distal3.596947.16053HepG2HLTF
chr106494893064948959-3'-UTR,CDS,intron-Distal,intron-Proximal4.659455.29868K562UCHL5
chr106494532364945363-3'-UTR,CDS,intron-Distal3.419027.61291HepG2BCLAF1
chr106495729564957317-3'-UTR,CDS,intron-Distal3.498273.31745K562ZNF622
chr106494912364949157-3'-UTR,CDS,intron-Distal4.9606413.34895HepG2BCLAF1
chr106495726164957323-3'-UTR,CDS,intron-Distal3.2781314.97798HepG2BCLAF1
chr106494611364946142-3'-UTR,CDS,intron-Distal4.1759610.78406HepG2BCLAF1
chr106495068664950697-3'-UTR,CDS,intron-Distal3.900533.32022K562UCHL5
chr106494598064946001-3'-UTR,CDS,intron-Distal5.6773610.71076HepG2BCLAF1
chr106495404864954132-3'-UTR,CDS,intron-Distal3.549874.53300K562LIN28B
chr106495830364958333-3'-UTR,CDS,intron-Distal3.376159.67260HepG2BCLAF1
chr106493617064936214-3'-UTR,CDS,intron-Distal3.750035.57819K562UCHL5
chr106493738564937466-3'-UTR,intron-Distal,intron-Proximal3.736504.93376K562PRPF8
chr106495836364958390-3'-UTR,CDS,intron-Distal4.3598212.43877HepG2BCLAF1
chr106495401264954060-3'-UTR,CDS,intron-Distal,intron-Proximal5.204033.37645HepG2PRPF8
chr106495827264958303-3'-UTR,CDS,intron-Distal,intron-Proximal3.6056511.76397HepG2BCLAF1
chr106497705964977098-3'-UTR,CDS,intron-Distal,intron-Proximal3.351413.76090HepG2U2AF2
chr106493748264937576-3'-UTR,CDS,intron-Distal4.9264229.37665HepG2BCLAF1
chr106494892864948948-3'-UTR,CDS,intron-Distal,intron-Proximal4.2269912.93761HepG2BCLAF1
chr106502440665024446-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.581024.56577HepG2EIF3H
chr106494603364946073-3'-UTR,CDS,intron-Distal5.2847316.08161HepG2BCLAF1
chr106492737964927429-3'-UTR,intron-Distal3.059823.32575HepG2FUBP3
chr106492784164927872-3'-UTR,CDS,intron-Distal3.097316.80151HepG2BCLAF1
chr106494443364944464-3'-UTR,CDS,intron-Distal4.4225912.53492HepG2BCLAF1
chr106493753964937593-3'-UTR,CDS,intron-Distal3.982146.29174K562ZNF622
chr106492710864927208-3'-UTR,intron-Distal3.808574.86553HepG2FUBP3
chr106495077664950834-3'-UTR,CDS,intron-Distal4.8860617.34901HepG2BCLAF1
chr106493612864936173-3'-UTR,CDS,intron-Distal3.737179.83905HepG2BCLAF1
chr106495289964952976-3'-UTR,CDS,intron-Distal,intron-Proximal3.417293.04623HepG2KHSRP
chr106494330764943321-3'-UTR,CDS,intron-Distal3.892587.23562HepG2BCLAF1
chr106495071364950776-3'-UTR,CDS,intron-Distal3.8285517.41968HepG2BCLAF1
chr106492751164927596-3'-UTR,intron-Distal6.2820273.81020K562PUM2
chr106492745464927503-3'-UTR,intron-Distal4.919766.28020HepG2FUBP3
chr106492773964927775-3'-UTR,intron-Distal4.261629.80976HepG2BCLAF1
chr106492700864927090-3'-UTR,intron-Distal6.4497136.25498K562PUM2
chr106522555965225623-5'-UTR,intron-Distal5.198964.63331HepG2XRN2
chr106502870365028734-5'-UTR,intron-Distal,intron-Proximal4.293864.15208K562RBM15
chr106502873965028858-5'-UTR,intron-Distal,intron-Proximal5.7621813.65176K562RBM15
chr106502851265028578-5'-UTR,intron-Distal5.5488911.20228K562RBM15
chr106522560365225654-5'-UTR,intron-Distal,intron-Proximal4.277908.65685K562TIA1
chr106514011165140164-5'-UTR,CDS,intron-Distal4.087159.08790HepG2BCLAF1
chr106522555865225622-5'-UTR,intron-Distal4.201323.94554K562XRN2
chr106502859865028679-5'-UTR,intron-Distal,intron-Proximal3.407126.93472K562RBM15
chr106502889365028957-5'-UTR,intron-Distal,intron-Proximal3.806634.80676K562RBM15
chr106502890965028980-5'-UTR,intron-Distal,intron-Proximal3.513487.46719HepG2NCBP2
chr106522555765225604-5'-UTR,intron-Distal3.228643.00463HepG2NKRF
chr106496773364967827-CDS,intron-Distal3.163503.56709HepG2IGF2BP1
chr106497450464974571-CDS,intron-Distal3.285749.90091HepG2HLTF
chr106497462064974683-CDS,intron-Distal4.255788.58706K562UCHL5
chr106496637364966441-CDS,intron-Distal3.552355.65306K562ZNF622
chr106496848264968534-CDS,intron-Distal3.3119710.16885HepG2HLTF
chr106496704064967147-CDS,intron-Distal3.427794.41952K562IGF2BP1
chr106496704964967143-CDS,intron-Distal3.1995414.18827HepG2HLTF
chr106497462664974651-CDS,intron-Distal4.6063414.65888HepG2BCLAF1
chr106496841664968438-CDS,intron-Distal3.056337.20615HepG2BCLAF1
chr106496637664966448-CDS,intron-Distal4.9574225.84411HepG2BCLAF1
chr106497359964973761-CDS,intron-Distal4.0129111.49791K562IGF2BP1
chr106496781564967865-CDS,intron-Distal3.200427.50579HepG2HLTF
chr106496757164967681-CDS,intron-Distal,intron-Proximal3.917836.90563HepG2FXR2
chr106497391364973962-CDS,intron-Distal3.9781012.28745HepG2BCLAF1
chr106497502264975044-CDS,intron-Distal,intron-Proximal6.0931113.95734HepG2BCLAF1
chr106497479564974850-CDS,intron-Distal4.8209016.44959HepG2BCLAF1
chr106497421664974275-CDS,intron-Distal3.611577.70405K562ZNF622
chr106496636964966424-CDS,intron-Distal3.9035813.15145HepG2HLTF
chr106496848764968526-CDS,intron-Distal3.362914.22460K562RBM15
chr106496847964968542-CDS,intron-Distal4.5065625.43749HepG2BCLAF1
chr106497443764974498-CDS,intron-Distal5.6414527.82740HepG2BCLAF1
chr106497505864975115-CDS,intron-Distal,intron-Proximal3.403655.91739K562UCHL5
chr106497347864973562-CDS,intron-Distal3.989414.14779K562SAFB
chr106497440764974413-CDS,intron-Distal5.234836.13315HepG2BCLAF1
chr106497338164973520-CDS,intron-Distal4.565685.30214K562IGF2BP2
chr106496753664967555-CDS,intron-Distal,intron-Proximal3.438447.74581HepG2BCLAF1
chr106496823564968291-CDS,intron-Distal3.273403.54620HepG2LIN28B
chr106497448364974620-CDS,intron-Distal3.8570915.19385K562UCHL5
chr106497472764974742-CDS,intron-Distal3.539115.56491HepG2BCLAF1
chr106496699764967038-CDS,intron-Distal3.350307.21693HepG2HLTF
chr106497408264974096-CDS,intron-Distal3.911304.15543HepG2HLTF
chr106496829564968324-CDS,intron-Distal4.366974.42734K562UCHL5
chr106496685664966886-CDS,intron-Distal3.278756.13735HepG2HLTF
chr106497450264974570-CDS,intron-Distal4.9270824.93927HepG2BCLAF1
chr106497422864974271-CDS,intron-Distal4.331068.82647HepG2HLTF
chr106496751764967559-CDS,intron-Distal,intron-Proximal3.178546.77895HepG2HLTF
chr106497440464974496-CDS,intron-Distal3.6200514.03018HepG2HLTF
chr106497448464974565-CDS,intron-Distal3.643876.05315HepG2FXR2
chr106497486164974908-CDS,intron-Distal4.9232518.70260HepG2BCLAF1
chr106496802064968060-CDS,intron-Distal3.089376.63863HepG2HLTF
chr106496041564960466-CDS,intron-Distal,intron-Proximal5.164347.71913HepG2U2AF2
chr106497464164974675-CDS,intron-Distal4.950086.99374K562ZNF622
chr106496756764967625-CDS,intron-Distal,intron-Proximal3.5042013.50876HepG2BCLAF1
chr106497390964973965-CDS,intron-Distal3.509037.48780HepG2HLTF
chr106496823364968291-CDS,intron-Distal4.551636.10169K562LIN28B
chr106497330164973397-CDS,intron-Distal3.639945.00403K562IGF2BP1
chr106496637264966456-CDS,intron-Distal3.119394.31863K562RBM15
chr106497463364974702-CDS,intron-Distal3.680876.45305HepG2FXR2
chr106496676164966855-CDS,intron-Distal4.808797.35095K562IGF2BP1
chr106497504464975098-CDS,intron-Distal,intron-Proximal5.1537612.44336HepG2BCLAF1
chr106497442464974506-CDS,intron-Distal3.858619.56042K562ZNF622
chr106497445464974467-CDS,intron-Distal4.492744.42734K562UCHL5
chr106497368264973718-CDS,intron-Distal4.797085.51215K562RBM15
chr106497364164973700-CDS,intron-Distal3.1443913.21046HepG2BCLAF1
chr106497465164974699-CDS,intron-Distal4.9384418.25084HepG2BCLAF1
chr106516575265165819-intron-Distal4.774566.07567K562KHSRP
chr106506121065061325-intron-Distal3.609103.02234K562KHSRP
chr106514658265146647-intron-Distal5.127197.14250K562HNRNPM
chr106514671765146758-intron-Distal3.960466.41051K562EXOSC5
chr106520266865202752-intron-Distal5.077696.45442HepG2HNRNPM
chr106497522364975272-intron-Distal,intron-Proximal4.798917.39218K562SF3B4
chr106513276165132778-intron-Distal7.0867524.48208K562DGCR8
chr106521607565216172-intron-Distal3.619365.20123K562KHSRP
chr106514638665146430-intron-Distal4.280733.04182K562HNRNPM
chr106506879365068907-intron-Distal5.4773811.13888HepG2HNRNPM
chr106521036965210422-intron-Distal3.213834.08064K562KHSRP
chr106495856364958646-intron-Distal,intron-Proximal3.612558.01059K562KHSRP
chr106511430665114365-intron-Distal3.568213.08967K562KHDRBS1
chr106514784365147894-intron-Distal3.961533.30687K562EXOSC5
chr106508564265085719-intron-Distal4.355035.25174K562KHSRP
chr106515056065150599-intron-Distal4.804824.48560K562EXOSC5
chr106522102065221092-intron-Distal4.223264.85626K562TARDBP
chr106513100565131060-intron-Distal4.019003.91018K562KHDRBS1
chr106506977165069859-intron-Distal3.557524.76004K562KHSRP
chr106500912565009180-intron-Distal3.934626.41317HepG2QKI
chr106522114665221174-intron-Distal4.5739810.69368K562KHSRP
chr106509694665097037-intron-Distal3.808793.37208HepG2ILF3
chr106513272665132785-intron-Distal6.6296825.19726HepG2DGCR8
chr106522255665222640-intron-Distal3.396564.72639K562KHSRP
chr106513216565132269-intron-Distal3.222003.62796K562KHDRBS1
chr106495864664958718-intron-Distal3.763025.78005K562KHSRP
chr106508574365085798-intron-Distal3.918507.99418K562KHSRP
chr106513277865132791-intron-Distal4.358843.10925K562DGCR8
chr106514633565146388-intron-Distal5.141878.36716K562EXOSC5
chr106501765465017724-intron-Distal3.163293.35585HepG2QKI
chr106520616165206240-intron-Distal4.171786.73852HepG2SUGP2
chr106503637265036510-intron-Distal3.163123.57155HepG2ILF3
chr106500648065006567-intron-Distal3.735235.72132HepG2HNRNPM
chr106499888064998949-intron-Distal4.993903.92866K562PTBP1
chr106518548765185543-intron-Distal3.167723.63132HepG2HNRNPC
chr106514603965146092-intron-Distal4.121903.79026K562HNRNPM
chr106518793565188004-intron-Distal4.350564.72162K562KHSRP
chr106502831965028374-intron-Distal3.208863.31456K562TIA1
chr106508486565084915-intron-Distal3.696293.24603K562KHSRP
chr106508579865085913-intron-Distal3.9989712.21830K562KHSRP
chr106495996864960040-intron-Distal3.827804.70224K562KHSRP
chr106496000764960070-intron-Distal4.267115.51743K562QKI
chr106500366165003722-intron-Distal4.120983.96879HepG2MATR3
chr106496011964960182-intron-Distal,intron-Proximal4.541264.26925HepG2KHSRP
chr106520596065206053-intron-Distal4.689236.26399K562MATR3
chr106500025065000294-intron-Distal4.356234.17759HepG2QKI
chr106520598665206073-intron-Distal3.855727.24444HepG2MATR3
chr106514675865146806-intron-Distal5.175957.71312K562EXOSC5
chr106517636365176428-intron-Distal3.724583.45805K562KHSRP
chr106495985964959972-intron-Distal5.5284214.42007K562QKI
chr106511752165117616-intron-Distal3.805933.34609K562TARDBP
chr106522252565222577-intron-Distal3.512583.64140HepG2SFPQ
chr106495295964953083-intron-Distal,intron-Proximal4.0680210.80633K562KHSRP
chr106508156265081686-intron-Distal3.829953.22483K562SAFB2
chr106519169665191776-intron-Distal4.182004.51536HepG2HNRNPC
chr106495297664953039-intron-Distal,intron-Proximal4.179073.73609HepG2KHSRP
chr106513619865136256-intron-Distal3.807687.40091HepG2U2AF2
chr106522512365225181-intron-Distal3.366383.54602K562TIA1
chr106514827065148363-intron-Distal3.457253.14999K562EXOSC5
chr106522019565220285-intron-Distal3.516874.40834HepG2QKI
chr106520598065206127-intron-Distal5.0591323.67481HepG2QKI
chr106499907364999146-intron-Distal3.362693.19404HepG2PTBP1
chr106522129165221416-intron-Distal4.5191118.78344K562KHSRP
chr106509716265097212-intron-Distal5.446449.01334HepG2PCBP2
chr106513335165133409-intron-Distal4.345625.62258K562KHSRP
chr106509722365097265-intron-Distal4.657885.57752HepG2PTBP1
chr106514660365146671-intron-Distal5.175957.71312K562EXOSC5
chr106499970664999829-intron-Distal4.566225.96177K562KHDRBS1
chr106509722465097306-intron-Distal3.856153.84109HepG2PCBP2
chr106509715765097206-intron-Distal4.472104.78106HepG2PTBP1
chr106520204165202140-intron-Distal3.130237.22523K562KHSRP
chr106514650965146575-intron-Distal4.856985.84413K562HNRNPM
chr106506878565068867-intron-Distal4.762857.14250K562HNRNPM
chr106513272665132761-intron-Distal8.1514671.94328K562DGCR8
chr106500642465006480-intron-Distal4.962096.44072HepG2HNRNPM
chr106515157165151607-intron-Distal4.164773.59909K562EXOSC5
chr106513610265136202-intron-Distal3.212749.07887K562KHSRP
chr106508392765084034-intron-Distal4.029693.79026K562HNRNPM
chr106509726565097317-intron-Distal5.548017.91717K562PTBP1
chr106495858764958634-intron-Distal3.958523.47043HepG2KHSRP
chr106522188065221926-intron-Distal3.455413.91876HepG2U2AF2
chr106520620365206391-intron-Distal3.946515.60995K562MATR3
chr106509716065097210-intron-Distal5.144336.95895K562PTBP1
chr106521596565216032-intron-Distal3.088785.01170K562KHSRP
chr106500651065006566-intron-Distal4.196273.30687K562EXOSC5
chr106519914665199205-intron-Distal3.770075.56048K562KHSRP
chr106520620165206298-intron-Distal3.464554.32634HepG2PTBP1
chr106517692965177031-intron-Distal3.596133.90141HepG2SFPQ
chr106500648065006563-intron-Distal3.743864.32964K562HNRNPM
chr106513579465135852-intron-Distal3.529755.35459K562KHSRP
chr106504453665044638-intron-Distal4.728646.23114K562TARDBP
chr106514664765146684-intron-Distal4.343703.29197K562HNRNPM
chr106522107465221146-intron-Distal4.9552614.84917K562KHSRP
chr106518772765187813-intron-Distal3.958523.48768HepG2KHSRP
chr106496007564960195-intron-Distal,intron-Proximal3.197896.60947K562KHSRP
chr106501378065013866-intron-Distal3.659033.29239HepG2CSTF2
chr106518778565187935-intron-Distal4.0584416.03139K562KHSRP
chr106504457065044643-intron-Distal4.183447.84958K562EIF4G2
chr106521076965210907-intron-Distal4.5640510.93437K562KHSRP
chr106506986065069926-intron-Distal4.105964.07352K562KHSRP
chr106500986465009927-intron-Distal5.209526.79309HepG2ILF3
chr106499873664998845-intron-Distal3.274533.99165HepG2PTBP1
chr106520617765206230-intron-Distal4.507735.01910HepG2MATR3
chr106507278565072866-intron-Distal3.605533.01412K562SAFB2
chr106517598365176097-intron-Distal3.351265.34873K562KHSRP
chr106495853464958563-intron-Distal,intron-Proximal3.040243.76473K562KHSRP
chr106521620165216283-intron-Distal4.766806.94732K562KHSRP
chr106514989065149937-intron-Distal4.430469.40005K562EXOSC5
chr106520513265205218-intron-Distal3.657257.75281HepG2SUGP2
chr106514650065146563-intron-Distal4.007029.08614K562EXOSC5
chr106519086165190944-intron-Distal3.638553.02234K562KHSRP
chr106499885464998946-intron-Distal5.345988.13723HepG2PTBP1
chr106513611365136272-intron-Distal3.161024.39362HepG2KHSRP
chr106500595065006046-intron-Distal3.936306.02877HepG2SUGP2
chr106520375365203837-intron-Distal3.109103.46531K562KHSRP
chr106499907164999141-intron-Distal3.660884.58716HepG2QKI
chr106520631865206371-intron-Distal4.622804.90095K562PTBP1
chr106508372565083777-intron-Distal5.378514.82195HepG2XPO5
chr106521726165217324-intron-Distal3.610985.14864K562KHSRP
chr106508022665080335-intron-Distal3.892463.65589K562SAFB2
chr106519594265196109-intron-Distal3.087657.09377K562KHSRP
chr106506708065067167-intron-Distal4.651657.00634K562KHSRP
chr106521728365217423-intron-Distal6.0735715.79267HepG2PTBP1
chr106506119865061263-intron-Distal4.617455.29390K562TARDBP
chr106500017465000228-intron-Distal5.085956.93116HepG2QKI
chr106515081165150864-intron-Distal3.529227.41097K562EXOSC5
chr106508403565084148-intron-Distal3.651343.39857HepG2HNRNPM
chr106506702765067080-intron-Distal3.287884.35650K562KHSRP
chr106500674965006784-intron-Distal4.272663.86368HepG2HNRNPM
chr106500571665005785-intron-Distal3.628484.53157HepG2MATR3
chr106519055965190666-intron-Distal4.347697.56199K562AGGF1
chr106514579965145830-intron-Distal3.651774.91094K562EXOSC5
chr106521732165217375-intron-Distal4.9410512.02468K562PTBP1
chr106500986765009927-intron-Distal3.961643.82619K562ILF3
chr106514970665149762-intron-Distal5.105227.38693K562EXOSC5
chr106516286265162951-intron-Distal4.576523.80778HepG2QKI
chr106514653865146640-intron-Distal4.615194.05245HepG2EXOSC5
chr106504464365044706-intron-Distal3.837509.42391K562EIF4G2
chr106521596065216035-intron-Distal4.119494.02395HepG2KHSRP
chr106520596365206040-intron-Distal3.228787.69812HepG2SUGP2
chr106519906865199146-intron-Distal3.751295.78005K562KHSRP
chr106513243465132544-intron-Distal5.531789.83600K562CPSF6
chr106516564965165752-intron-Distal4.153429.53244K562KHSRP
chr106500612065006186-intron-Distal3.163595.59320HepG2SUGP2
chr106509726565097324-intron-Distal4.6148011.56570HepG2PTBP1
chr106515177465151864-intron-Distal5.343558.36716K562EXOSC5
chr106522229165222394-intron-Distal3.380364.40834HepG2QKI
chr106515028465150358-intron-Distal4.386247.61413K562EXOSC5
chr106514633965146386-intron-Distal4.198203.04182K562HNRNPM
chr106504466565044717-intron-Distal3.985933.91772K562TARDBP
chr106499899564999048-intron-Distal3.913823.62418K562PTBP1
chr106520604365206195-intron-Distal3.325416.39847K562QKI
chr106520589465205963-intron-Distal3.387556.05394HepG2SUGP2
chr106514669365146751-intron-Distal4.650195.31505K562HNRNPM
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for JMJD1C is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for JMJD1C is not available on ENCORE database.

  • 98 RBPs can affect the levels of JMJD1C.  








The Knockdown/knockout RNA-Seq assay for JMJD1C is not available on ENCORE database.





98 RBPs can affect the gene expression of JMJD1C :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
JMJD1CENSG00000171988.132641.146402294.307700.203002.311901.60380HepG2AKAP8L
JMJD1CENSG00000171988.131063.707501526.37330-0.521003.425402.38370HepG2BCCIP
JMJD1CENSG00000171988.131707.065401326.433000.363902.909501.98630HepG2BCLAF1
JMJD1CENSG00000171988.133202.734002283.102200.4882014.4741013.20130HepG2CKAP4
JMJD1CENSG00000171988.132274.049503596.38870-0.661304.692503.69140HepG2CNOT7
JMJD1CENSG00000171988.133050.147302089.777400.545406.738805.70020HepG2CPSF6
JMJD1CENSG00000171988.131650.970402145.82250-0.378202.855401.82070HepG2YBX3
JMJD1CENSG00000171988.131271.649602020.49260-0.668009.849308.65330HepG2DDX21
JMJD1CENSG00000171988.132617.266401977.055700.404604.893703.66680HepG2DDX24
JMJD1CENSG00000171988.134443.273202373.103600.904706.459204.99260HepG2DDX59
JMJD1CENSG00000171988.132162.357102776.48080-0.360702.127801.57870HepG2DDX6
JMJD1CENSG00000171988.132564.029902184.705300.230902.851102.16410HepG2DKC1
JMJD1CENSG00000171988.131732.884502088.40340-0.269204.232603.45880HepG2DNAJC2
JMJD1CENSG00000171988.132580.731101761.550000.550806.040904.73960HepG2EIF3D
JMJD1CENSG00000171988.132225.349902950.68580-0.407002.072801.51720HepG2EIF4A3
JMJD1CENSG00000171988.133096.955102440.629400.343502.912402.07780HepG2EIF4G2
JMJD1CENSG00000171988.133202.658202517.310200.347303.338802.14490HepG2ESF1
JMJD1CENSG00000171988.131639.622201249.170600.392303.073301.73760HepG2FKBP4
JMJD1CENSG00000171988.132798.879101860.691300.588909.055707.67460HepG2FUBP3
JMJD1CENSG00000171988.133213.145802368.860700.439703.725102.99180HepG2GPKOW
JMJD1CENSG00000171988.131703.300802127.28250-0.320702.875202.21670HepG2HNRNPA1
JMJD1CENSG00000171988.132515.823002020.471600.316204.820403.90780HepG2HNRNPF
JMJD1CENSG00000171988.133338.990202260.653300.562606.742605.80880HepG2HNRNPLL
JMJD1CENSG00000171988.131571.244902024.63160-0.365803.691102.60480HepG2HNRNPM
JMJD1CENSG00000171988.131682.013202350.53800-0.4828010.518609.39910HepG2HNRNPU
JMJD1CENSG00000171988.132092.363302401.00170-0.198503.105702.33270HepG2ILF2
JMJD1CENSG00000171988.132452.160203426.02470-0.482503.739202.31840HepG2KHDRBS1
JMJD1CENSG00000171988.132737.933104358.43400-0.670706.641305.34050HepG2LARP4
JMJD1CENSG00000171988.132573.178002003.257400.361103.266201.41170HepG2LSM11
JMJD1CENSG00000171988.131904.129202994.03070-0.653004.277703.50990HepG2MATR3
JMJD1CENSG00000171988.133554.405102305.714200.624302.516301.59470HepG2MTPAP
JMJD1CENSG00000171988.132564.827901994.237400.362903.766302.34840HepG2NAA15
JMJD1CENSG00000171988.132393.872503064.68090-0.356401.996201.45410HepG2NCBP2
JMJD1CENSG00000171988.132408.747601805.078900.416104.612802.77590HepG2NIP7
JMJD1CENSG00000171988.133093.107802004.548500.625708.652907.38200HepG2NSUN2
JMJD1CENSG00000171988.133139.339802710.729200.211702.507401.92280HepG2PCBP1
JMJD1CENSG00000171988.133862.549202436.696200.664505.178603.78800HepG2PCBP2
JMJD1CENSG00000171988.131887.149901158.026300.704409.078207.70810HepG2PRPF8
JMJD1CENSG00000171988.133051.839802594.968900.233903.771403.10180HepG2PUM1
JMJD1CENSG00000171988.133274.359402593.120200.336403.046202.34170HepG2PUM2
JMJD1CENSG00000171988.133672.940202987.385400.298003.564102.86790HepG2QKI
JMJD1CENSG00000171988.134584.257102352.038600.962707.487106.35830HepG2RAVER1
JMJD1CENSG00000171988.134643.512603342.209500.474304.785803.69630HepG2RBM15
JMJD1CENSG00000171988.133917.898703197.096700.293204.000403.40730HepG2RBM22
JMJD1CENSG00000171988.132501.884703069.65750-0.295103.618803.01670HepG2NELFE
JMJD1CENSG00000171988.133160.969402309.377700.452802.578401.66460HepG2RPS10
JMJD1CENSG00000171988.131315.932301713.98500-0.381303.724403.02190HepG2RPS19
JMJD1CENSG00000171988.132485.710101145.564901.1175018.8982017.18910HepG2RRP9
JMJD1CENSG00000171988.131836.860602093.27500-0.188502.169001.58650HepG2SAFB2
JMJD1CENSG00000171988.133624.422402237.562800.6957011.165609.83600HepG2SF3B1
JMJD1CENSG00000171988.132976.160002343.829700.344507.129806.08670HepG2SLBP
JMJD1CENSG00000171988.131769.342302441.14120-0.4643012.6112011.39280HepG2SMN1
JMJD1CENSG00000171988.133961.544202489.694400.670005.211304.12850HepG2SNRNP70
JMJD1CENSG00000171988.136399.846403611.031200.8255043.8424042.47510HepG2SRFBP1
JMJD1CENSG00000171988.131969.983301429.441700.462604.352802.37850HepG2SRP68
JMJD1CENSG00000171988.133974.259902407.731700.722907.707505.96060HepG2SRSF3
JMJD1CENSG00000171988.132693.288801985.034000.440108.791707.66870HepG2SRSF7
JMJD1CENSG00000171988.133129.966802438.519600.360006.939206.13670HepG2SRSF9
JMJD1CENSG00000171988.132156.506703140.48860-0.542304.316202.90790HepG2STIP1
JMJD1CENSG00000171988.133032.115102197.881000.464102.635501.46640HepG2SUB1
JMJD1CENSG00000171988.132221.054701494.006000.572006.014805.07530HepG2SUPV3L1
JMJD1CENSG00000171988.133253.955202694.008900.272303.194102.59760HepG2TAF15
JMJD1CENSG00000171988.132655.534202203.608900.269002.054901.41790HepG2TARDBP
JMJD1CENSG00000171988.131578.188802284.09530-0.533408.540907.74990HepG2TIAL1
JMJD1CENSG00000171988.131697.780302304.39700-0.440708.867707.94780HepG2TRIM56
JMJD1CENSG00000171988.134574.973002510.151700.8659016.3323014.75820HepG2U2AF1
JMJD1CENSG00000171988.132521.289703072.57550-0.285304.786603.90960HepG2UPF1
JMJD1CENSG00000171988.131889.017402966.44470-0.6511019.2492017.88860HepG2UTP3
JMJD1CENSG00000171988.132340.567103233.91260-0.466403.110701.94050HepG2XPO5
JMJD1CENSG00000171988.133157.730402311.889600.449702.653401.42450HepG2XRCC5
JMJD1CENSG00000171988.13977.930701470.68170-0.588704.858803.90630HepG2XRN2
JMJD1CENSG00000171988.133740.387003379.239100.146402.050301.56110HepG2ZNF622
JMJD1CENSG00000171988.132044.464101648.391100.310602.699501.53390K562AARS
JMJD1CENSG00000171988.132741.579103314.67530-0.273904.121903.45390K562AGGF1
JMJD1CENSG00000171988.132700.400603642.30360-0.431705.022403.60150K562AKAP8
JMJD1CENSG00000171988.132892.894303449.06410-0.253702.022601.46200K562AKAP8L
JMJD1CENSG00000171988.133691.094602915.784200.340103.084302.47160K562AQR
JMJD1CENSG00000171988.133024.631603618.88760-0.258803.046802.08890K562ATP5C1
JMJD1CENSG00000171988.131463.265501715.60010-0.229502.263101.39530K562BCLAF1
JMJD1CENSG00000171988.131504.021301908.10880-0.343304.106202.42220K562DDX6
JMJD1CENSG00000171988.133111.326603711.47640-0.254503.146302.20390K562DKC1
JMJD1CENSG00000171988.131439.385401107.742100.377703.020201.61470K562DNAJC21
JMJD1CENSG00000171988.131441.890601047.824900.460502.217501.32940K562EIF3A
JMJD1CENSG00000171988.132839.115601555.722300.8678010.555808.36220K562EIF3D
JMJD1CENSG00000171988.131361.568501770.76780-0.379104.608703.05060K562EIF4B
JMJD1CENSG00000171988.132633.585402047.460000.363102.993501.32960K562FASTKD2
JMJD1CENSG00000171988.131614.925202837.77980-0.8133014.5000012.38340K562FIP1L1
JMJD1CENSG00000171988.133492.954302177.659000.681606.437205.25810K562G3BP2
JMJD1CENSG00000171988.131715.759702906.62400-0.7605014.2052012.46630K562GRSF1
JMJD1CENSG00000171988.131395.119002334.03910-0.742409.079507.21100K562HNRNPM
JMJD1CENSG00000171988.132587.346103847.53250-0.572507.993706.65730K562HSPD1
JMJD1CENSG00000171988.132829.860903503.82900-0.308202.926601.81400K562MAK16
JMJD1CENSG00000171988.132189.835302497.47700-0.189602.215401.48820K562MTPAP
JMJD1CENSG00000171988.131693.362403221.33270-0.9278017.8197015.14870K562PPIG
JMJD1CENSG00000171988.132195.395801413.785000.634808.166806.87410K562PRPF8
JMJD1CENSG00000171988.131064.758601617.56880-0.603305.522404.18050K562PSIP1
JMJD1CENSG00000171988.132065.998602500.77820-0.275502.573501.92940K562PTBP1
JMJD1CENSG00000171988.132642.237803420.56690-0.372503.722703.10640K562PUS1
JMJD1CENSG00000171988.132975.237002077.688700.517902.898401.44350K562RAVER1
JMJD1CENSG00000171988.132506.160403332.79260-0.411306.488605.60650K562RBM15
JMJD1CENSG00000171988.131887.897801475.525300.355503.721102.57200K562RCC2
JMJD1CENSG00000171988.132551.115501960.570800.379804.457902.21140K562SLTM
JMJD1CENSG00000171988.132216.823301757.396400.335003.009301.35170K562SND1
JMJD1CENSG00000171988.133866.881102805.192800.463009.312907.70650K562SRPK2
JMJD1CENSG00000171988.132501.934201974.097000.341804.451602.77400K562SSB
JMJD1CENSG00000171988.131898.645601369.058700.471704.108302.85050K562SUPV3L1
JMJD1CENSG00000171988.132008.707202481.29020-0.304802.318401.66770K562TARDBP
JMJD1CENSG00000171988.132741.329401797.951300.608405.182102.71860K562TRNAU1AP
JMJD1CENSG00000171988.132904.717002179.838400.414105.676104.52550K562U2AF2
JMJD1CENSG00000171988.132995.815902618.070000.194302.510201.70210K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for JMJD1C is not available on ENCORE database.





12 RBPs can affect the splicing of JMJD1C :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEJMJD1CENSG00000171988.13chr10-649753126497545664975022649752156497696664977091-0.213000.000000.00000excludedHepG2U2AF1
SEJMJD1CENSG00000171988.13chr10-6497531264975456649750226497521564976966649770910.075000.000710.05709includedHepG2TBRG4
SEJMJD1CENSG00000171988.13chr10-649753126497545664975022649752156497696664977091-0.251000.000000.00000excludedHepG2U2AF2
SEJMJD1CENSG00000171988.13chr10-649432066494332964937476649376166494436764944498-0.098000.000220.00341excludedK562AQR
SEJMJD1CENSG00000171988.13chr10-649796376497974364976966649770916502441065024524-0.216000.003740.04972excludedK562PUS1
SEJMJD1CENSG00000171988.13chr10-649753126497545664975022649752156497696664977091-0.256000.000000.00000excludedK562PUS1
SEJMJD1CENSG00000171988.13chr10-6497963764979743649769666497709165024410650245240.272000.000700.03481includedHepG2SFPQ
SEJMJD1CENSG00000171988.13chr10-649753126497545664975022649752156497696664977091-0.323000.000060.00205excludedK562U2AF1
SEJMJD1CENSG00000171988.13chr10-649753126497545664975022649752156497696664977091-0.077000.000590.08306excludedHepG2RBM15
SEJMJD1CENSG00000171988.13chr10-649753126497545664975022649752156497696664977091-0.107000.000510.04168excludedK562HNRNPUL1
SEJMJD1CENSG00000171988.13chr10-649753126497545664975022649752156497696664977091-0.155000.000090.00534excludedK562UTP18
SEJMJD1CENSG00000171988.13chr10-649753126497545664975022649752156497696664977091-0.558000.000000.00000excludedK562U2AF2
SEJMJD1CENSG00000171988.13chr10-649796376497974364976966649770916502441065024524-0.371000.000020.00142excludedK562HNRNPU
SEJMJD1CENSG00000171988.13chr10-649753126497545664975022649752156497696664977091-0.216000.000000.00005excludedK562RBM15
SEJMJD1CENSG00000171988.13chr10-6497963764979743649769666497709165024410650245240.358000.000480.07723includedK562EIF3G
A3SSJMJD1CENSG00000171988.13chr10-649753126497545664975312649753776497696664977091-0.172000.000010.02369shorterHepG2RBM5
A3SSJMJD1CENSG00000171988.13chr10-6495404564954234649540456495413564957170649573850.072000.000040.00037longerK562AQR
A3SSJMJD1CENSG00000171988.13chr10-6493747664937686649374766493761664943206649434130.058000.000010.00007longerK562AQR
A3SSJMJD1CENSG00000171988.13chr10-6494436764944544649443676494449864945322649454540.120000.000000.00000longerK562AQR
A3SSJMJD1CENSG00000171988.13chr10-6493605664936257649360566493623364937476649376750.070000.000190.00158longerK562AQR
A3SSJMJD1CENSG00000171988.13chr10-6497696664977120649769666497709165024410650245450.213000.020870.09883longerK562AQR
A3SSJMJD1CENSG00000171988.13chr10-6502441065024545650244106502452465028422650288260.872000.000010.00008longerK562AQR
A3SSJMJD1CENSG00000171988.13chr10-6495269864952947649526986495291164953104649532690.075000.000110.00094longerK562AQR
A3SSJMJD1CENSG00000171988.13chr10-6496023564960473649602356496043764966354649685610.075000.005770.03277longerK562AQR
MXEJMJD1CENSG00000171988.13chr10-64943206649433296494436764944521649374766493761664945322649454130.143000.000000.000001includedK562AQR
MXEJMJD1CENSG00000171988.13chr10-64943206649433296494436764944518649374766493761664945322649454130.095000.000020.000291includedK562AQR
MXEJMJD1CENSG00000171988.13chr10-64943206649433296494436764944544649374766493761664945322649454130.103000.000010.000101includedK562AQR
MXEJMJD1CENSG00000171988.13chr10-6494436764944498649453226494541364936559649376166494597464946143-0.068000.002070.017122includedK562AQR
MXEJMJD1CENSG00000171988.13chr10-6494436764944521649453226494541364937476649376166494597464946143-0.076000.000500.005012includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for JMJD1C is not avaliable on ENCORE database.