ITFG3

General Information

Gene Name       : ITFG3
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ITFG3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ITFG3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ITFG3 RNA is bound by 14 proteins.  







eCLIP assay for ITFG3 is not avaliable on ENCORE database.





14 proteins are bound to ITFG3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr16315935316023+3'-UTR,intron-Distal4.752899.43510K562UPF1
chr16304390304452+3'-UTR,5'-UTR,CDS4.271566.61245HepG2DDX3X
chr16315558315683+3'-UTR,intron-Distal4.3604016.22320K562UPF1
chr16299546299606+3'-UTR,5'-UTR,intron-Proximal4.1740211.11007HepG2DDX3X
chr16315318315417+3'-UTR,intron-Distal4.797128.65101K562DDX55
chr16315683315763+3'-UTR,intron-Distal4.7126714.74404K562UPF1
chr16315761315888+3'-UTR,intron-Distal5.7527727.78772HepG2UPF1
chr16315909316011+3'-UTR,intron-Distal3.103248.46943HepG2AKAP1
chr16315370315454+3'-UTR,intron-Distal4.0279912.73184K562UPF1
chr16315699315759+3'-UTR,intron-Distal4.568833.78860K562AKAP1
chr16315359315441+3'-UTR,intron-Distal5.7322713.43839HepG2AKAP1
chr16315603315714+3'-UTR,intron-Distal4.5001310.63403HepG2AKAP1
chr16315347315429+3'-UTR,intron-Distal3.7063716.76733HepG2PCBP2
chr16315232315291+3'-UTR,intron-Distal5.5048512.58146HepG2UPF1
chr16315889315936+3'-UTR,intron-Distal5.3197010.25977HepG2UPF1
chr16315074315277+3'-UTR,intron-Distal4.5068321.96972HepG2AKAP1
chr16315383315426+3'-UTR,intron-Distal5.763276.75862K562PCBP1
chr16315486315518+3'-UTR,intron-Distal4.732483.74891K562DDX55
chr16304397304469+3'-UTR,5'-UTR,CDS3.492725.23852K562DDX3X
chr16304390304501+3'-UTR,5'-UTR,CDS3.788593.43526K562GRWD1
chr16315365315456+3'-UTR,intron-Distal5.4576521.70604HepG2UPF1
chr16315162315232+3'-UTR,intron-Distal5.9730716.41729HepG2UPF1
chr16315784315880+3'-UTR,intron-Distal3.262767.09494HepG2DDX55
chr16315477315558+3'-UTR,intron-Distal4.5146718.47716K562UPF1
chr16315800315892+3'-UTR,intron-Distal3.459699.82186K562UPF1
chr16315714315909+3'-UTR,intron-Distal4.3697518.90079HepG2AKAP1
chr16315075315148+3'-UTR,intron-Distal4.8819415.35482HepG2UPF1
chr16315429315544+3'-UTR,intron-Distal4.8868831.63223HepG2PCBP2
chr16315441315558+3'-UTR,intron-Distal5.1271916.90273HepG2AKAP1
chr16315619315686+3'-UTR,intron-Distal6.1814420.22720HepG2UPF1
chr16315936315990+3'-UTR,intron-Distal3.5719310.17204HepG2UPF1
chr16315475315575+3'-UTR,intron-Distal5.6167125.41525HepG2UPF1
chr16284821284856+5'-UTR5.834988.23278HepG2DDX3X
chr16310135310160+CDS,intron-Proximal3.558203.79230K562SND1
chr16304505304568+CDS4.000333.65750K562YBX3
chr16313307313396+CDS4.334643.49905HepG2PPIG
chr16310145310205+CDS,intron-Proximal4.035514.45914HepG2PRPF8
chr16310144310213+CDS,intron-Proximal3.460435.58816K562PRPF8
chr16313400313451+CDS,intron-Proximal4.747594.13847K562AQR
chr16311382311420+CDS,intron-Proximal3.072483.41653K562SND1
chr16313239313307+CDS,intron-Proximal3.127123.05161HepG2PPIG
chr16318098318196+intron-Distal6.0777016.62195K562AGGF1
chr16313788313886+intron-Distal,intron-Proximal4.345365.20806K562TIA1
chr16316847316880+intron-Distal4.505384.30270K562AGGF1
chr16314189314212+intron-Distal,intron-Proximal3.464894.88100K562AQR
chr16313796313859+intron-Proximal4.234654.21433K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ITFG3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ITFG3 is not available on ENCORE database.

  • 108 RBPs can affect the levels of ITFG3.  








The Knockdown/knockout RNA-Seq assay for ITFG3 is not available on ENCORE database.





108 RBPs can affect the gene expression of ITFG3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ITFG3ENSG00000167930.111699.729501424.881300.254401.837601.32390HepG2ACO1
ITFG3ENSG00000167930.112955.844702073.555400.511401.803301.36370HepG2AKAP1
ITFG3ENSG00000167930.111210.393001988.95240-0.716506.968005.95840HepG2AUH
ITFG3ENSG00000167930.11626.75050980.01650-0.644904.128503.21050HepG2CALR
ITFG3ENSG00000167930.111825.272801112.667000.7140015.7802014.49250HepG2CELF1
ITFG3ENSG00000167930.111761.244401196.501100.5577012.2010010.82240HepG2DAZAP1
ITFG3ENSG00000167930.113554.228201985.868100.839706.872605.92870HepG2DDX3X
ITFG3ENSG00000167930.111324.24600965.545600.455704.689402.97280HepG2DDX52
ITFG3ENSG00000167930.112902.279201706.940500.765705.060004.24750HepG2DDX6
ITFG3ENSG00000167930.11480.00160679.47060-0.501403.962902.80250HepG2DHX30
ITFG3ENSG00000167930.111260.00910704.484300.8387017.4316015.81470HepG2DNAJC21
ITFG3ENSG00000167930.111140.33050698.246300.7075016.0160014.57560HepG2DNAJC2
ITFG3ENSG00000167930.112751.844301639.892400.746704.412403.67290HepG2EIF2S1
ITFG3ENSG00000167930.11778.380001180.32620-0.600609.879608.48770HepG2EIF4G1
ITFG3ENSG00000167930.111480.144101130.694200.388403.062702.20740HepG2EIF4G2
ITFG3ENSG00000167930.111286.49550835.801900.622106.215604.42840HepG2FAM120A
ITFG3ENSG00000167930.111146.035201492.90530-0.381502.312401.58970HepG2FUBP3
ITFG3ENSG00000167930.111204.95490818.273700.558203.959802.73710HepG2GNB2L1
ITFG3ENSG00000167930.111282.09060997.919900.361402.224401.64690HepG2GPKOW
ITFG3ENSG00000167930.111011.67160711.233300.508202.956702.29070HepG2HNRNPA1
ITFG3ENSG00000167930.111303.285001090.156200.257502.928102.19180HepG2HNRNPF
ITFG3ENSG00000167930.111426.718701089.954600.388305.951704.99500HepG2HNRNPL
ITFG3ENSG00000167930.111216.34010952.340100.352902.337301.75330HepG2HNRNPLL
ITFG3ENSG00000167930.111118.08140785.879900.508507.912906.92760HepG2HNRNPU
ITFG3ENSG00000167930.11850.438401553.97200-0.869703.629102.21770HepG2HSPD1
ITFG3ENSG00000167930.11967.99990802.751300.270003.017502.25460HepG2ILF2
ITFG3ENSG00000167930.111685.331301302.314700.371903.299002.18740HepG2KIF1C
ITFG3ENSG00000167930.112297.339201752.577100.390402.427001.65230HepG2LARP4
ITFG3ENSG00000269881.17.735300.0000099999.999902.007801.30850HepG2LARP4
ITFG3ENSG00000167930.111204.79130801.933200.587104.635103.16470HepG2LARP7
ITFG3ENSG00000167930.111197.06900841.647400.508104.133502.65300HepG2LIN28B
ITFG3ENSG00000167930.111111.691901437.50090-0.370802.777501.96800HepG2MSI2
ITFG3ENSG00000167930.111754.421901186.442100.564308.764907.43370HepG2NOL12
ITFG3ENSG00000167930.111057.89450544.810800.957307.685505.28530HepG2NOLC1
ITFG3ENSG00000167930.111212.83520777.893700.640608.675007.31170HepG2PARN
ITFG3ENSG00000167930.111109.41500773.206500.520806.123604.33360HepG2PKM
ITFG3ENSG00000167930.111301.52000700.943100.892707.942506.74390HepG2PPIL4
ITFG3ENSG00000167930.11704.996801295.73680-0.8781020.8915019.11180HepG2PRPF4
ITFG3ENSG00000167930.111759.793101202.196700.5496013.2158012.12360HepG2PUM1
ITFG3ENSG00000167930.111647.041401201.341000.455105.463404.53660HepG2PUM2
ITFG3ENSG00000167930.111727.174901451.285700.251001.838401.31440HepG2PUS1
ITFG3ENSG00000167930.11257.79380893.61020-1.793403.344602.57240HepG2RAVER1
ITFG3ENSG00000167930.111192.058501908.78290-0.679208.096807.31900HepG2RBM22
ITFG3ENSG00000167930.111137.02190785.290100.533902.292101.32870HepG2RCC2
ITFG3ENSG00000167930.111536.759301960.76610-0.351502.317901.81370HepG2NELFE
ITFG3ENSG00000167930.11816.966401174.18610-0.523303.499902.74600HepG2RPLP0
ITFG3ENSG00000167930.111240.36360891.793100.475903.301002.42640HepG2RPS2
ITFG3ENSG00000167930.11260.72720658.84930-1.337403.202502.36510HepG2RRP9
ITFG3ENSG00000167930.11977.32930699.864100.481706.833405.88830HepG2SAFB2
ITFG3ENSG00000167930.111385.267301834.14980-0.404903.020902.40610HepG2SF3B4
ITFG3ENSG00000167930.111824.890401085.847600.7489022.3744020.76240HepG2SLBP
ITFG3ENSG00000167930.111143.45320816.165500.486408.309907.29010HepG2SMN1
ITFG3ENSG00000167930.111680.26600914.569400.877403.739302.61260HepG2SMNDC1
ITFG3ENSG00000167930.111564.014502155.82380-0.463004.870304.25920HepG2SRFBP1
ITFG3ENSG00000167930.111187.578401914.57050-0.689005.934205.30660HepG2SRSF1
ITFG3ENSG00000167930.11590.638301014.34750-0.780206.562704.96810HepG2SRSF3
ITFG3ENSG00000167930.111898.028901118.167200.7633019.9317018.45920HepG2SRSF5
ITFG3ENSG00000167930.11662.949201557.70440-1.2325014.5703013.48390HepG2SRSF9
ITFG3ENSG00000167930.111459.575401871.63250-0.358703.272702.72600HepG2SSB
ITFG3ENSG00000167930.111935.752201271.701100.6060015.1408013.87670HepG2SUCLG1
ITFG3ENSG00000167930.111869.598601199.328500.640408.916107.30480HepG2SUPT6H
ITFG3ENSG00000167930.11741.658401721.21040-1.2146013.3280012.23580HepG2TAF15
ITFG3ENSG00000167930.111049.49780763.650500.458604.763304.14380HepG2TIAL1
ITFG3ENSG00000167930.111888.00710770.454101.2930053.8647051.79540HepG2TRIM56
ITFG3ENSG00000167930.111700.633101106.376900.620105.352704.09270HepG2TUFM
ITFG3ENSG00000167930.11583.460501519.67660-1.3811014.9953013.48560HepG2U2AF1
ITFG3ENSG00000167930.111715.802101258.393300.447208.139307.04620HepG2UPF1
ITFG3ENSG00000167930.111096.411401278.72880-0.221902.281001.66360HepG2ZC3H8
ITFG3ENSG00000167930.111887.358301383.991400.447409.987009.10990HepG2ZNF622
ITFG3ENSG00000167930.11999.94110755.934600.403502.979101.70260K562ABCF1
ITFG3ENSG00000167930.11743.985501135.91960-0.610504.789204.05510K562AQR
ITFG3ENSG00000167930.11904.91980602.865800.585906.316604.22460K562BCCIP
ITFG3ENSG00000167930.11880.92880582.651600.596305.073103.75600K562BCLAF1
ITFG3ENSG00000167930.112332.447201728.257600.432405.951704.18710K562CCDC124
ITFG3ENSG00000167930.11664.64590442.028300.588305.697804.10390K562CSTF2
ITFG3ENSG00000167930.111302.17650936.252600.475906.872704.92850K562DDX21
ITFG3ENSG00000167930.111374.99310845.268600.7018010.583508.40790K562DDX3X
ITFG3ENSG00000167930.111174.31130856.977400.454403.773202.18060K562DDX6
ITFG3ENSG00000167930.111303.257101619.25360-0.313203.335502.36340K562DKC1
ITFG3ENSG00000167930.111272.97210928.398200.455306.504904.61540K562EIF2S1
ITFG3ENSG00000167930.111235.94690763.944300.6940012.2960010.93640K562EIF2S2
ITFG3ENSG00000167930.111010.77450654.053700.627903.486202.34500K562EIF3A
ITFG3ENSG00000167930.11510.55750375.718400.442303.248302.38900K562EIF3G
ITFG3ENSG00000167930.111092.16450795.237700.457605.396103.70520K562EIF4B
ITFG3ENSG00000167930.111905.280801379.262800.466003.879502.76990K562EIF4G2
ITFG3ENSG00000167930.111228.18110820.641800.581607.307605.21420K562EXOSC5
ITFG3ENSG00000167930.11446.22480677.44950-0.602302.417901.37610K562FKBP4
ITFG3ENSG00000167930.11563.96540918.35820-0.7035010.663709.56190K562FXR1
ITFG3ENSG00000167930.11114.61850266.67830-1.218307.930106.60670K562G3BP2
ITFG3ENSG00000167930.11958.31780696.197300.460903.967402.57150K562HNRNPF
ITFG3ENSG00000167930.111201.60400863.381600.476804.868402.40660K562HNRNPH1
ITFG3ENSG00000167930.11303.34540602.17970-0.989209.947307.55250K562HNRNPK
ITFG3ENSG00000167930.111064.23210603.086500.819302.722601.70690K562IGF2BP2
ITFG3ENSG00000167930.11973.21480613.368600.665907.793205.66510K562IGF2BP3
ITFG3ENSG00000167930.11459.71950755.40610-0.716505.268703.26680K562LARP7
ITFG3ENSG00000167930.11853.78130632.386500.433003.823202.72330K562MATR3
ITFG3ENSG00000167930.11979.57890461.740601.085006.359904.24210K562NONO
ITFG3ENSG00000167930.111546.514301093.752900.4996011.020409.66780K562NSUN2
ITFG3ENSG00000167930.11353.98940563.80510-0.671505.567504.17060K562PCBP2
ITFG3ENSG00000167930.111897.175601417.271500.420602.915401.43720K562PNPT1
ITFG3ENSG00000167930.11960.12820616.925800.638006.612305.24840K562PPIG
ITFG3ENSG00000167930.11921.026901504.79580-0.708304.983003.89100K562PUF60
ITFG3ENSG00000167930.11134.27150254.43150-0.922103.798002.10290K562RAVER1
ITFG3ENSG00000167930.11893.15060637.913800.485404.417003.16160K562RCC2
ITFG3ENSG00000167930.11935.41500708.140500.401503.083001.74450K562SLBP
ITFG3ENSG00000167930.11538.18340944.52050-0.811503.667502.18180K562SNRNP200
ITFG3ENSG00000167930.11879.16520604.692300.539804.703503.26310K562SRFBP1
ITFG3ENSG00000167930.11826.94120454.876900.862203.632501.72630K562SRP68
ITFG3ENSG00000167930.11870.55590603.586800.528305.094604.13870K562SRSF1
ITFG3ENSG00000167930.11978.18680617.634500.663303.163602.02110K562SRSF4
ITFG3ENSG00000167930.11973.58690570.078000.772109.464107.39740K562SRSF5
ITFG3ENSG00000167930.11763.30460440.289600.793702.288901.36980K562SUPV3L1
ITFG3ENSG00000167930.11654.72620803.10610-0.294702.078101.36600K562SYNCRIP
ITFG3ENSG00000167930.11845.04490610.838100.468102.382201.72360K562TARDBP
ITFG3ENSG00000167930.11691.33860401.621600.783503.147901.34920K562TFIP11
ITFG3ENSG00000167930.111193.30390589.230501.0180019.1861016.89430K562TIA1
ITFG3ENSG00000167930.11946.55730578.284000.710807.927505.82640K562TRA2A
ITFG3ENSG00000167930.111029.87530714.398900.527602.426201.55050K562TRIM56
ITFG3ENSG00000167930.11152.48610258.43750-0.761102.900001.77730K562U2AF1
ITFG3ENSG00000167930.11147.59580266.92950-0.854805.983304.80620K562U2AF2
ITFG3ENSG00000167930.11769.56700466.214200.723002.347901.41860K562UCHL5
ITFG3ENSG00000167930.111747.318001159.732500.5913012.8294011.42040K562UPF1
ITFG3ENSG00000167930.111210.92510992.341400.287102.227901.44330K562WDR3
ITFG3ENSG00000167930.111020.51030475.086401.102906.127104.08710K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ITFG3 is not available on ENCORE database.





12 RBPs can affect the splicing of ITFG3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEITFG3ENSG00000167930.11chr16+2982422983962848422848562995472996530.109000.000120.00336includedHepG2U2AF1
SEITFG3ENSG00000167930.11chr16+2982422983962848422848562995472996530.081000.000130.00493includedHepG2HNRNPK
SEITFG3ENSG00000167930.11chr16+2982422983962848422848562995472996530.068000.000000.00035includedHepG2TBRG4
SEITFG3ENSG00000167930.11chr16+2982422983962848422848562995472996530.212000.000060.05056includedHepG2HLTF
SEITFG3ENSG00000167930.11chr16+2982422983962848422848562995472996530.188000.000000.00000includedHepG2SRSF1
SEITFG3ENSG00000167930.11chr16+2982422983962848422848562995472996530.085000.000470.05622includedHepG2SSB
SEITFG3ENSG00000167930.11chr16+3038313039282995472996533043793046800.090000.000010.00137includedHepG2IGF2BP3
SEITFG3ENSG00000167930.11chr16+298346298396284544284856299547299653-0.073000.000080.04537excludedHepG2SMNDC1
SEITFG3ENSG00000167930.11chr16+298242298396284842284856299547299653-0.077000.001790.06654excludedHepG2HNRNPU
SEITFG3ENSG00000167930.11chr16+3038313039282995472996533043793046800.053000.001120.02117includedK562HNRNPC
SEITFG3ENSG00000167930.11chr16+314014314170313698313774314612314715-0.078000.003410.05157excludedK562HNRNPC
A3SSITFG3ENSG00000167930.11chr16+309967310159309994310159309481309598-0.152000.000360.05882shorterK562RBM22
A3SSITFG3ENSG00000167930.11chr16+304379304680304386304680299547299653-0.154000.000740.04185shorterK562SF3B4
MXEITFG3ENSG00000167930.11chr16+3113823114503114503115133099673101593120913122240.176000.003970.074121includedHepG2HNRNPK

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ITFG3 is not avaliable on ENCORE database.