HS3ST3B1

General Information

Gene Name       : HS3ST3B1
Gene ID             : ENSG00000125430.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HS3ST3B1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HS3ST3B1ENSG00000125430.80.000.020.01ENCSR000AEF
HepG2HS3ST3B1ENSG00000125430.811.0612.2911.68ENCSR985KAT
K562HS3ST3B1ENSG00000125430.81.821.771.79ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HS3ST3B1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • HS3ST3B1 RNA is bound by 28 proteins.  







eCLIP assay for HS3ST3B1 is not avaliable on ENCORE database.





28 proteins are bound to HS3ST3B1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr171425007914250132+3'-UTR,intron-Distal3.753793.29371HepG2IGF2BP1
chr171424889514249006+3'-UTR,CDS3.603037.44807HepG2GRWD1
chr171420445014204506+5'-UTR5.8339265.76612HepG2DDX3X
chr171420469014204705+5'-UTR4.289889.94006HepG2DDX3X
chr171420440514204450+5'-UTR7.4514324.80780HepG2DDX3X
chr171420440114204447+5'-UTR4.424374.61711HepG2NCBP2
chr171420451814204578+5'-UTR4.5461844.42444HepG2DDX3X
chr171420474214204860+5'-UTR,CDS4.9957762.88998HepG2DDX3X
chr171420441414204616+5'-UTR4.674607.13477K562DDX3X
chr171420497714205032+CDS3.5809118.65072HepG2DDX3X
chr171420521814205260+CDS3.532014.66813HepG2RBM15
chr171420496914205039+CDS3.946305.17218HepG2UPF1
chr171420530014205344+CDS4.130085.76695HepG2RBM15
chr171420486014204924+CDS4.4614233.68615HepG2DDX3X
chr171421579614215871+intron-Distal3.588158.87481HepG2PTBP1
chr171420596914206073+intron-Distal3.4775416.79175HepG2CSTF2T
chr171420592214205969+intron-Distal3.156677.98197HepG2CSTF2T
chr171423691914237008+intron-Distal4.384245.20041HepG2PRPF4
chr171421279214212869+intron-Distal3.758255.89977HepG2EIF3D
chr171421234814212435+intron-Distal3.118856.78375HepG2SFPQ
chr171420907614209132+intron-Distal4.019293.30829HepG2CSTF2
chr171423692714237010+intron-Distal4.159083.57264HepG2GTF2F1
chr171421245814212510+intron-Distal3.043473.13224HepG2ZC3H11A
chr171420883314208894+intron-Distal3.976975.45107HepG2FUBP3
chr171420784714207893+intron-Distal3.321023.51824HepG2EIF3D
chr171420883414208912+intron-Distal3.427665.75194HepG2CSTF2
chr171421484114214906+intron-Distal4.227453.19026HepG2HNRNPL
chr171420668414206741+intron-Distal3.536107.81163HepG2PCBP2
chr171420590314205976+intron-Distal3.409465.60807HepG2RBM15
chr171420903614209187+intron-Distal3.144888.70770HepG2SFPQ
chr171420584514205899+intron-Distal3.392444.67847HepG2FUS
chr171421595814216053+intron-Distal4.6077114.32285HepG2PCBP2
chr171421982314219909+intron-Distal3.133265.26084HepG2HNRNPM
chr171420674914206808+intron-Distal3.096316.14590HepG2DDX3X
chr171421243214212525+intron-Distal4.090593.88645HepG2FUS
chr171421257014212628+intron-Distal3.722893.95205HepG2NKRF
chr171420590214205972+intron-Distal3.987375.39448HepG2AKAP1
chr171420597314206048+intron-Distal3.947738.05338HepG2UPF1
chr171421312314213163+intron-Distal3.435863.68481HepG2HNRNPM
chr171421278514212912+intron-Distal3.214168.36677HepG2SFPQ
chr171421244914212507+intron-Distal4.154684.00239HepG2KHSRP
chr171421596814216071+intron-Distal4.904808.12204HepG2HNRNPK
chr171423232614232408+intron-Distal4.005043.80418HepG2AGGF1
chr171421274014212839+intron-Distal3.128294.74839HepG2XRN2
chr171420546214205560+intron-Distal,intron-Proximal4.8743614.84455HepG2UPF1
chr171421243514212528+intron-Distal3.8703510.85334HepG2SFPQ
chr171423079714230906+intron-Distal3.351615.04671HepG2SFPQ
chr171420590414205973+intron-Distal4.508097.35773HepG2UPF1
chr171421255414212597+intron-Distal3.215864.53852HepG2SFPQ
chr171423064014230727+intron-Distal4.745033.50357HepG2QKI
chr171421252814212611+intron-Distal4.0464911.16670HepG2CSTF2T
chr171420674914206800+intron-Distal4.027884.01760HepG2TIAL1
chr171422030614220375+intron-Distal4.336054.17531HepG2RBFOX2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HS3ST3B1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HS3ST3B1 is not available on ENCORE database.

  • 110 RBPs can affect the levels of HS3ST3B1.  








The Knockdown/knockout RNA-Seq assay for HS3ST3B1 is not available on ENCORE database.





110 RBPs can affect the gene expression of HS3ST3B1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HS3ST3B1ENSG00000125430.4935.225201218.99420-0.382303.852803.15710HepG2ACO1
HS3ST3B1ENSG00000125430.4450.51680646.86190-0.521903.814302.66540HepG2ADAR
HS3ST3B1ENSG00000125430.41091.027301641.20860-0.589104.978404.29110HepG2AKAP1
HS3ST3B1ENSG00000125430.4759.847601062.78080-0.484103.560602.38620HepG2AKAP8
HS3ST3B1ENSG00000125430.4431.450201224.55830-1.5050041.6955039.30700HepG2AKAP8L
HS3ST3B1ENSG00000125430.41295.970301752.01450-0.435006.659705.66630HepG2AUH
HS3ST3B1ENSG00000125430.4427.62810769.42070-0.847407.586605.99630HepG2BCCIP
HS3ST3B1ENSG00000125430.4894.62390668.534700.420202.421701.58210HepG2BCLAF1
HS3ST3B1ENSG00000125430.41107.61930687.245600.688507.952807.00200HepG2BOP1
HS3ST3B1ENSG00000125430.4689.072101192.49610-0.791307.024205.46180HepG2CCAR1
HS3ST3B1ENSG00000125430.41055.259401218.53320-0.207502.025901.44440HepG2CKAP4
HS3ST3B1ENSG00000125430.4529.70400931.18940-0.813905.596404.50560HepG2CNOT7
HS3ST3B1ENSG00000125430.4903.58750630.908200.518103.548402.78000HepG2CPSF6
HS3ST3B1ENSG00000125430.4720.040601147.60510-0.6725011.6437010.50060HepG2CELF1
HS3ST3B1ENSG00000125430.41558.428901234.063100.336604.981704.02930HepG2DAZAP1
HS3ST3B1ENSG00000125430.4355.12960758.83710-1.0954015.5018014.04990HepG2DDX21
HS3ST3B1ENSG00000125430.4523.18770756.51690-0.532003.538802.67790HepG2DDX55
HS3ST3B1ENSG00000125430.41255.88580716.449500.809705.068503.75620HepG2DDX59
HS3ST3B1ENSG00000125430.41739.098601350.623100.364602.333401.76230HepG2DDX6
HS3ST3B1ENSG00000125430.4804.85380628.243200.357302.459301.53400HepG2DHX30
HS3ST3B1ENSG00000125430.4926.242001396.93960-0.592804.083703.25600HepG2EIF4B
HS3ST3B1ENSG00000125430.41764.546301217.387800.535409.593208.21610HepG2EIF4G1
HS3ST3B1ENSG00000125430.42142.048501166.196000.8771014.3655012.61680HepG2EIF4G2
HS3ST3B1ENSG00000125430.41468.657402011.49640-0.453807.789206.86780HepG2ETF1
HS3ST3B1ENSG00000125430.4722.746201191.00110-0.7206010.222108.65220HepG2EWSR1
HS3ST3B1ENSG00000125430.4652.900401197.21530-0.874707.872406.64650HepG2FIP1L1
HS3ST3B1ENSG00000125430.41064.70780741.750300.521405.191004.12520HepG2FUBP3
HS3ST3B1ENSG00000125430.4495.57610985.21570-0.991309.192307.29970HepG2FUS
HS3ST3B1ENSG00000125430.4682.040901342.82070-0.9773012.7780011.40190HepG2G3BP1
HS3ST3B1ENSG00000125430.41124.236201425.75000-0.342802.362101.54310HepG2G3BP2
HS3ST3B1ENSG00000125430.4320.98380469.42450-0.548403.265402.28200HepG2GEMIN5
HS3ST3B1ENSG00000125430.4589.60760928.30260-0.654804.079602.20140HepG2GTF2F1
HS3ST3B1ENSG00000125430.4957.754301134.08830-0.243802.135901.30390HepG2HNRNPA2B1
HS3ST3B1ENSG00000125430.41000.39760731.463500.451603.702502.91040HepG2HNRNPC
HS3ST3B1ENSG00000125430.4952.16280693.256600.457705.488604.52050HepG2HNRNPF
HS3ST3B1ENSG00000125430.4716.046201360.03800-0.9255013.6705012.23550HepG2HNRNPK
HS3ST3B1ENSG00000125430.4971.161701124.16920-0.211102.054301.46280HepG2HNRNPL
HS3ST3B1ENSG00000125430.41156.15880682.463700.760408.515307.47580HepG2HNRNPLL
HS3ST3B1ENSG00000125430.4399.45520825.78490-1.0477012.6529010.86980HepG2HNRNPM
HS3ST3B1ENSG00000125430.4442.90400726.62860-0.7142010.568909.44780HepG2HNRNPU
HS3ST3B1ENSG00000125430.4775.328701157.01480-0.577504.276302.74000HepG2HSPD1
HS3ST3B1ENSG00000125430.41167.32730682.656800.7739012.0682010.66290HepG2IGF2BP1
HS3ST3B1ENSG00000125430.4695.691101281.09080-0.880904.060102.87120HepG2IGF2BP3
HS3ST3B1ENSG00000125430.4575.61370907.81160-0.657304.330102.64870HepG2ILF3
HS3ST3B1ENSG00000125430.4619.04500887.32220-0.519403.372902.03160HepG2KHDRBS1
HS3ST3B1ENSG00000125430.4835.826201259.51070-0.591604.464403.39940HepG2LARP4
HS3ST3B1ENSG00000125430.4510.40500689.74940-0.434403.176201.87370HepG2LIN28B
HS3ST3B1ENSG00000125430.42096.785101448.206100.533805.172704.28260HepG2MAGOH
HS3ST3B1ENSG00000125430.4621.946401456.27050-1.2274018.3120016.80450HepG2MATR3
HS3ST3B1ENSG00000125430.4532.35050968.56300-0.8635010.838009.34760HepG2MSI2
HS3ST3B1ENSG00000125430.41004.33090696.148600.528702.921301.92220HepG2MTPAP
HS3ST3B1ENSG00000125430.4774.790401223.68880-0.6594010.487709.03630HepG2NOL12
HS3ST3B1ENSG00000125430.4996.71180605.175900.719707.589706.39110HepG2NSUN2
HS3ST3B1ENSG00000125430.4518.77990719.25610-0.471404.936403.84580HepG2PARN
HS3ST3B1ENSG00000125430.41844.930601345.608600.455208.129907.17960HepG2PCBP1
HS3ST3B1ENSG00000125430.41073.50660630.256600.768206.605204.11610HepG2PHF6
HS3ST3B1ENSG00000125430.4794.95950648.097200.294602.285501.60860HepG2PPIL4
HS3ST3B1ENSG00000125430.41207.025401025.868600.234502.101201.41920HepG2PRPF4
HS3ST3B1ENSG00000125430.4543.57500980.50320-0.851006.510904.71440HepG2PRPF6
HS3ST3B1ENSG00000125430.4272.22620583.50390-1.0999011.5053010.02180HepG2PRPF8
HS3ST3B1ENSG00000125430.4819.479701168.08860-0.511405.462704.66100HepG2PUF60
HS3ST3B1ENSG00000125430.4437.06150643.19100-0.557403.357101.44950HepG2RBM14
HS3ST3B1ENSG00000125430.4345.328401681.24940-2.28350100.4211098.20240HepG2RBM22
HS3ST3B1ENSG00000125430.42061.403601345.810000.615109.426608.23740HepG2RBM25
HS3ST3B1ENSG00000125430.4825.240601523.80280-0.8848021.7420020.50620HepG2NELFE
HS3ST3B1ENSG00000125430.4207.02940513.03640-1.3092017.3846016.03880HepG2RPS19
HS3ST3B1ENSG00000125430.4562.54910730.67910-0.377302.062901.36570HepG2RPS2
HS3ST3B1ENSG00000125430.4499.43900745.89600-0.578704.938303.48960HepG2RPS5
HS3ST3B1ENSG00000125430.4383.91990514.88180-0.423402.332801.46590HepG2SERBP1
HS3ST3B1ENSG00000125430.4733.166201469.86840-1.0035010.986109.58100HepG2SF3A3
HS3ST3B1ENSG00000125430.4959.73850675.471400.506604.301503.43940HepG2SF3B1
HS3ST3B1ENSG00000125430.41192.354401425.50310-0.257702.601102.02450HepG2SF3B4
HS3ST3B1ENSG00000125430.41433.540701119.944100.356105.143204.23420HepG2SLBP
HS3ST3B1ENSG00000125430.4474.67180754.64650-0.6689010.809809.67200HepG2SMN1
HS3ST3B1ENSG00000125430.4391.02400751.59220-0.942705.809904.66970HepG2SNRNP70
HS3ST3B1ENSG00000125430.41180.483901898.92800-0.6858017.7735016.79510HepG2SRFBP1
HS3ST3B1ENSG00000125430.4808.315101487.93430-0.8803022.6221021.55100HepG2SRSF1
HS3ST3B1ENSG00000125430.4476.34100726.90300-0.609803.878902.67170HepG2SRSF3
HS3ST3B1ENSG00000125430.4887.113201153.27610-0.378504.644403.86870HepG2SRSF5
HS3ST3B1ENSG00000125430.4833.46230681.112400.291102.337901.69400HepG2SRSF7
HS3ST3B1ENSG00000125430.41414.891201210.529100.225002.300701.78770HepG2SRSF9
HS3ST3B1ENSG00000125430.41047.141801648.75170-0.6549014.9566013.95500HepG2SSB
HS3ST3B1ENSG00000125430.4753.160001311.62800-0.8003020.3100018.87380HepG2SUCLG1
HS3ST3B1ENSG00000125430.41240.05080808.087100.617707.474105.98580HepG2SUPT6H
HS3ST3B1ENSG00000125430.4276.42740753.07540-1.4459018.9074017.41130HepG2SUPV3L1
HS3ST3B1ENSG00000125430.41112.767901337.46250-0.265302.380201.85360HepG2TAF15
HS3ST3B1ENSG00000125430.4884.40410665.341700.410502.889802.15070HepG2TARDBP
HS3ST3B1ENSG00000125430.4737.081401023.92070-0.474204.154603.39180HepG2U2AF1
HS3ST3B1ENSG00000125430.4745.622301207.81720-0.695906.494605.18050HepG2UBE2L3
HS3ST3B1ENSG00000125430.4843.345101303.55450-0.628307.184206.14640HepG2UPF1
HS3ST3B1ENSG00000125430.4809.313001258.52160-0.637006.940506.06540HepG2UTP3
HS3ST3B1ENSG00000125430.4468.09890989.83500-1.0804010.820508.88130HepG2XRCC6
HS3ST3B1ENSG00000125430.4702.966401433.65200-1.0282014.8217013.80480HepG2ZNF622
HS3ST3B1ENSG00000125430.4106.73940237.99240-1.156807.743105.71970K562ABCF1
HS3ST3B1ENSG00000125430.4153.37380236.06990-0.622203.025102.34130K562AKAP8L
HS3ST3B1ENSG00000125430.4113.08990249.31480-1.140505.978005.17190K562AQR
HS3ST3B1ENSG00000125430.4148.85010281.42640-0.918906.306504.84570K562CELF1
HS3ST3B1ENSG00000125430.4176.04770116.228600.598902.489001.50350K562DDX3X
HS3ST3B1ENSG00000125430.4318.93010221.001200.529103.343802.63770K562DDX47
HS3ST3B1ENSG00000125430.4402.37270171.277501.2321015.2716013.78880K562EIF2S2
HS3ST3B1ENSG00000125430.4183.93810121.426900.599002.441301.66970K562EIF4A3
HS3ST3B1ENSG00000125430.483.82100171.05220-1.029103.621902.64160K562FIP1L1
HS3ST3B1ENSG00000125430.4105.97880178.53840-0.752503.593102.29810K562GLRX3
HS3ST3B1ENSG00000125430.435.8153081.13310-1.179702.295001.74420K562HNRNPC
HS3ST3B1ENSG00000125430.4327.49480231.929500.497702.300101.56990K562HSPD1
HS3ST3B1ENSG00000125430.4148.51020250.54130-0.754504.324503.26210K562KIF1C
HS3ST3B1ENSG00000125430.4233.79170119.697900.965706.486305.17020K562MAGOH
HS3ST3B1ENSG00000125430.4100.79570196.72680-0.964803.991102.87540K562NAA15
HS3ST3B1ENSG00000125430.4113.30410208.54850-0.880205.381804.39180K562NSUN2
HS3ST3B1ENSG00000125430.470.39360137.57370-0.966702.461301.54120K562PABPN1
HS3ST3B1ENSG00000125430.474.89680150.38490-1.005704.134803.11580K562PCBP3
HS3ST3B1ENSG00000125430.453.88300115.35260-1.098104.060903.08680K562POLR2G
HS3ST3B1ENSG00000125430.4436.81270260.213800.747206.220404.76340K562PUM2
HS3ST3B1ENSG00000125430.497.38110234.14140-1.265707.703006.84390K562PUS1
HS3ST3B1ENSG00000125430.4125.89050228.11490-0.857605.055104.27560K562RBM15
HS3ST3B1ENSG00000125430.4134.56790205.81000-0.613003.048902.19490K562SF3A3
HS3ST3B1ENSG00000125430.447.61900111.54640-1.228004.439403.12700K562SUPV3L1
HS3ST3B1ENSG00000125430.4104.11600189.21160-0.861804.503603.37310K562WDR3
HS3ST3B1ENSG00000125430.4133.89500280.91740-1.069005.354304.08850K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HS3ST3B1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of HS3ST3B1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for HS3ST3B1 is not avaliable on ENCORE database.