FTSJ3

General Information

Gene Name       : FTSJ3
Gene ID             : ENSG00000108592.16
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: FTSJ3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FTSJ3ENSG00000108592.1631.8637.3934.62ENCSR000AEF
HepG2FTSJ3ENSG00000108592.1665.7258.3262.02ENCSR985KAT
K562FTSJ3ENSG00000108592.1638.0038.0938.05ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
FTSJ3A304-199A1BGKcLV40-61, Submitted, ENCORE2


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
FTSJ3K562CRISPRFTSJ3-BGKcLV40-61,FTSJ3-BGKcLV40-62NT-BGKcLV40-1,NT-BGKcLV40-2need discussion ,SubmittingENCORE2
FTSJ3HepG2CRISPRBGHcLV41-81,BGHcLV41-82BGHcLV41-1,BGHcLV41-2no band on the position,NotSatisfiedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
FTSJ3Product_ID: A304-199A
Lot_ID: 1
Source: Bethyl Labs
Target Name: FTSJ3-human		 FTSJ3-K562-CRISPR-A304-199A.png<br>Caption: Western blot following CRISPR against FTSJ3 in K562 whole cell lysate using FTSJ3 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against FTSJ3. FTSJ3 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.








RNA Targets

  • eCLIP assay for FTSJ3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • FTSJ3 RNA is bound by 16 proteins.  







eCLIP assay for FTSJ3 is not avaliable on ENCORE database.





16 proteins are bound to FTSJ3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr176190437561904427-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.568045.43815HepG2PRPF8
chr176189704261897096-3'-UTR,intron-Distal3.406383.68471HepG2BCLAF1
chr176190428161904345-3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.137223.56713HepG2SF3B4
chr176189893561899002-3'-UTR,CDS,intron-Distal,intron-Proximal3.261044.07132HepG2GRWD1
chr176189706761897160-3'-UTR,intron-Distal5.943218.38820K562PABPC4
chr176189705961897174-3'-UTR,CDS,intron-Distal5.336586.66767K562PUM1
chr176189712461897192-3'-UTR,CDS,intron-Distal3.057413.28855HepG2GRWD1
chr176189897761899000-3'-UTR,CDS,intron-Distal,intron-Proximal4.398694.67689HepG2PPIG
chr176189908961899186-3'-UTR,CDS,intron-Distal,intron-Proximal4.386949.48722K562UCHL5
chr176189697661897084-3'-UTR,intron-Distal4.253577.06029HepG2GRWD1
chr176190422061904289-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.437143.16816HepG2NCBP2
chr176189908261899186-3'-UTR,CDS,intron-Distal,intron-Proximal4.604005.41965HepG2G3BP1
chr176190432561904436-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.648105.56074HepG2NCBP2
chr176189908961899184-3'-UTR,CDS,intron-Distal,intron-Proximal3.431853.69997K562GRWD1
chr176189908561899194-3'-UTR,CDS,intron-Distal,intron-Proximal3.735824.91547HepG2GRWD1
chr176189711461897175-3'-UTR,CDS,intron-Distal3.982366.81811K562UCHL5
chr176190392361903991-5'-UTR,CDS,intron-Distal,intron-Proximal3.871479.24553HepG2PPIG
chr176189719461897262-CDS,intron-Distal4.875425.28590K562ZNF800
chr176190415561904210-CDS,intron-Distal,intron-Proximal5.300775.68502HepG2PRPF8
chr176189946261899544-CDS,intron-Distal,intron-Proximal3.651573.95921HepG2U2AF2
chr176189824761898297-CDS,intron-Distal,intron-Proximal4.507524.45558HepG2GRWD1
chr176190193861902013-CDS,intron-Distal,intron-Proximal4.2621111.41273HepG2PRPF8
chr176190124561901283-CDS,intron-Distal,intron-Proximal4.011083.12746HepG2GRWD1
chr176189840261898474-CDS,intron-Distal,intron-Proximal5.159456.96356K562UCHL5
chr176189839261898420-CDS,intron-Distal,intron-Proximal3.906353.12746HepG2GRWD1
chr176190114961901283-CDS,intron-Distal,intron-Proximal4.119903.15006K562RBM15
chr176189935561899441-CDS,intron-Distal,intron-Proximal4.130086.84754HepG2GRWD1
chr176189748261897529-CDS,intron-Distal,intron-Proximal4.346564.01763HepG2GRWD1
chr176190120861901286-CDS,intron-Distal,intron-Proximal3.012875.00751HepG2BCLAF1
chr176190119761901267-CDS,intron-Distal,intron-Proximal3.920635.96588K562ZNF622
chr176190127661901303-CDS,intron-Distal,intron-Proximal3.725084.49347K562UCHL5
chr176189821361898271-CDS,intron-Distal3.039303.41227K562UCHL5
chr176190120161901302-CDS,intron-Distal,intron-Proximal3.590723.69997K562GRWD1
chr176189844761898475-CDS,intron-Distal,intron-Proximal4.190923.43980K562ZNF622
chr176189718761897236-CDS,intron-Distal4.702325.86954K562UCHL5
chr176189843261898474-CDS,intron-Distal,intron-Proximal4.404304.01763HepG2GRWD1
chr176190118461901245-CDS,intron-Distal4.715045.59408HepG2GRWD1
chr176190144461901495-CDS,intron-Distal3.728777.26626HepG2PPIG
chr176189745461897529-CDS,intron-Distal,intron-Proximal3.752115.14848K562ZNF622
chr176190144261901491-CDS,intron-Distal,intron-Proximal3.725085.03335K562UCHL5
chr176190118561901313-CDS,intron-Distal,intron-Proximal3.914005.49349K562ZNF800
chr176190106461901179-CDS,intron-Distal,intron-Proximal4.600039.61639HepG2PRPF8
chr176190117861901231-CDS,intron-Distal4.209953.11282HepG2G3BP1
chr176189748061897534-CDS,intron-Distal,intron-Proximal3.368203.73413HepG2PPIG
chr176190144261901510-CDS,intron-Distal,intron-Proximal4.649095.41965HepG2G3BP1
chr176190230061902363-intron-Distal,intron-Proximal5.516147.24749HepG2EFTUD2
chr176190105461901122-intron-Distal,intron-Proximal3.442173.54718K562PRPF8
chr176189920661899287-intron-Distal,intron-Proximal3.065503.37120HepG2SF3B4
chr176190108761901144-intron-Distal,intron-Proximal4.972414.40230HepG2RBM22
chr176190230761902355-intron-Distal,intron-Proximal4.347575.95597K562EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FTSJ3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FTSJ3 is not available on ENCORE database.

  • 93 RBPs can affect the levels of FTSJ3.  








The Knockdown/knockout RNA-Seq assay for FTSJ3 is not available on ENCORE database.





93 RBPs can affect the gene expression of FTSJ3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FTSJ3ENSG00000108592.122029.795101411.597400.5239012.0135010.93750HepG2ACO1
FTSJ3ENSG00000108592.122573.469901579.742100.703907.470006.64020HepG2AKAP1
FTSJ3ENSG00000108592.121640.840701307.111800.328002.234201.52460HepG2ASCC1
FTSJ3ENSG00000108592.121857.336702314.80760-0.317704.679803.82790HepG2AUH
FTSJ3ENSG00000108592.121665.552502026.97600-0.283302.174801.63920HepG2BOP1
FTSJ3ENSG00000108592.121697.655501241.843700.451003.877102.97040HepG2CIRBP
FTSJ3ENSG00000108592.121162.72920836.234200.475402.369501.66520HepG2CNOT7
FTSJ3ENSG00000108592.121442.401001860.86610-0.367503.165502.43490HepG2CPSF6
FTSJ3ENSG00000108592.122642.328202001.721800.400505.651804.79540HepG2CELF1
FTSJ3ENSG00000108592.121675.043301324.135400.339002.856702.16880HepG2DDX21
FTSJ3ENSG00000108592.121464.095902113.15290-0.529402.672701.71390HepG2DDX59
FTSJ3ENSG00000108592.12988.901901299.90810-0.394502.413801.83300HepG2DDX6
FTSJ3ENSG00000108592.12906.168501185.62680-0.387804.395003.52440HepG2DNAJC21
FTSJ3ENSG00000108592.121483.273701163.674200.350002.476201.60140HepG2EEF2
FTSJ3ENSG00000108592.12869.872401219.44430-0.487303.197501.99770HepG2AGO1
FTSJ3ENSG00000108592.12915.788701249.67240-0.448503.352402.70410HepG2EIF2S1
FTSJ3ENSG00000108592.12819.158001338.05760-0.7079010.018607.98090HepG2EIF2S2
FTSJ3ENSG00000108592.121736.446401344.613600.368801.957901.37230HepG2EIF4B
FTSJ3ENSG00000108592.121330.374502033.95430-0.612505.371904.25810HepG2EIF4G2
FTSJ3ENSG00000108592.122047.282401393.368100.555005.612504.64920HepG2FXR1
FTSJ3ENSG00000108592.121085.166201347.62060-0.312503.717202.59710HepG2HDGF
FTSJ3ENSG00000108592.121502.934802475.65320-0.7200020.0028018.31800HepG2HNRNPF
FTSJ3ENSG00000108592.121836.789001308.787400.488904.965604.05050HepG2HNRNPK
FTSJ3ENSG00000108592.121263.850302013.05470-0.671608.211507.18930HepG2HNRNPLL
FTSJ3ENSG00000108592.121632.864602437.82170-0.578209.266608.01130HepG2IGF2BP1
FTSJ3ENSG00000108592.121623.443201313.893500.305102.029401.44200HepG2IGF2BP2
FTSJ3ENSG00000108592.121007.816001290.32490-0.356505.232103.83830HepG2KIF1C
FTSJ3ENSG00000108592.122424.572701401.664900.790509.496108.38600HepG2MATR3
FTSJ3ENSG00000108592.121369.810302053.10380-0.583803.973602.80200HepG2MTPAP
FTSJ3ENSG00000108592.12929.863101179.69310-0.343303.539802.71640HepG2PPIL4
FTSJ3ENSG00000108592.121022.483401352.69150-0.403805.567304.50980HepG2PRPF4
FTSJ3ENSG00000108592.121812.209701360.106000.413906.596305.82300HepG2PTBP1
FTSJ3ENSG00000108592.121478.905801852.18900-0.324703.413102.47000HepG2RBM15
FTSJ3ENSG00000108592.122982.693202221.428800.425007.204106.45950HepG2RBM22
FTSJ3ENSG00000108592.12932.362101336.83780-0.519905.948304.99380HepG2RBM25
FTSJ3ENSG00000108592.121768.237701513.645200.224202.281901.78060HepG2NELFE
FTSJ3ENSG00000108592.121163.89170919.184000.340402.736502.12430HepG2RPS19
FTSJ3ENSG00000108592.122613.942801842.162200.504703.717202.93150HepG2SF3A3
FTSJ3ENSG00000108592.121471.420801992.51330-0.437404.382603.51230HepG2SF3B1
FTSJ3ENSG00000108592.121406.916501953.52660-0.473503.419302.65350HepG2SLBP
FTSJ3ENSG00000108592.121844.659901373.556700.425309.100908.04220HepG2SMN1
FTSJ3ENSG00000108592.122233.638902508.97740-0.167701.943001.50090HepG2SRFBP1
FTSJ3ENSG00000108592.121202.548001478.01490-0.297603.450902.93790HepG2SRSF1
FTSJ3ENSG00000108592.121296.407202432.21270-0.9078030.7807028.96090HepG2SRSF7
FTSJ3ENSG00000108592.122864.108802287.405200.324303.705903.00440HepG2SUCLG1
FTSJ3ENSG00000108592.12896.824601202.77940-0.423503.725402.64680HepG2SUPT6H
FTSJ3ENSG00000108592.121280.639101962.16530-0.615607.733206.59940HepG2TARDBP
FTSJ3ENSG00000108592.121071.964401296.69740-0.274602.963602.38420HepG2TRIM56
FTSJ3ENSG00000108592.122015.772101523.553400.403803.950403.20530HepG2U2AF1
FTSJ3ENSG00000108592.121086.442601633.71510-0.5885012.9053011.60230HepG2UPF1
FTSJ3ENSG00000108592.122600.166601577.289500.7211022.4491020.98750HepG2UTP3
FTSJ3ENSG00000108592.122129.661801796.775500.245103.750503.13910HepG2ZNF622
FTSJ3ENSG00000108592.122340.286503315.79550-0.502703.960002.47500K562ABCF1
FTSJ3ENSG00000108592.12845.32890994.32930-0.234201.801501.32350K562AGGF1
FTSJ3ENSG00000108592.121386.326101665.44020-0.264602.734401.43360K562BCCIP
FTSJ3ENSG00000108592.121175.842301609.46220-0.452907.815906.17360K562BCLAF1
FTSJ3ENSG00000108592.121074.793201540.03070-0.518904.951603.76990K562BOP1
FTSJ3ENSG00000108592.121018.827601637.46120-0.6846010.986809.40680K562CPSF6
FTSJ3ENSG00000108592.12927.562601221.01700-0.396603.922802.63380K562CSTF2
FTSJ3ENSG00000108592.121640.511402062.06990-0.329904.542602.97130K562DDX21
FTSJ3ENSG00000108592.123762.347502389.109800.6551019.1603017.59710K562DDX47
FTSJ3ENSG00000108592.121048.099401504.19450-0.521204.977203.73680K562EFTUD2
FTSJ3ENSG00000108592.121350.358202507.80350-0.8931027.1418025.28830K562EIF2S2
FTSJ3ENSG00000108592.121096.503101610.68900-0.554804.357703.02510K562EIF3D
FTSJ3ENSG00000108592.121601.69430935.529600.7756016.2019014.20640K562EIF3G
FTSJ3ENSG00000108592.121819.506202533.86800-0.477803.433901.58400K562ESF1
FTSJ3ENSG00000108592.121149.813201542.25260-0.423602.593601.36950K562EXOSC5
FTSJ3ENSG00000108592.12710.932301000.85490-0.493404.428502.36230K562FASTKD2
FTSJ3ENSG00000108592.121500.179502383.27670-0.667806.614405.26090K562FIP1L1
FTSJ3ENSG00000108592.121121.242401666.14240-0.571406.575105.23430K562FMR1
FTSJ3ENSG00000108592.122042.17190761.153201.4237055.5928053.08550K562FXR1
FTSJ3ENSG00000108592.12422.63280711.86760-0.752204.009603.11950K562G3BP2
FTSJ3ENSG00000108592.121578.112001881.38390-0.253602.568401.47120K562GLRX3
FTSJ3ENSG00000108592.121147.400301563.34580-0.446304.421903.42490K562GPKOW
FTSJ3ENSG00000108592.12906.084101354.61170-0.580202.744102.14980K562HNRNPC
FTSJ3ENSG00000108592.122881.555602159.000100.416405.044403.57160K562HNRNPL
FTSJ3ENSG00000108592.121629.648801919.75250-0.236402.195901.40110K562HNRNPU
FTSJ3ENSG00000108592.121885.581303231.39370-0.777108.987007.56820K562HSPD1
FTSJ3ENSG00000108592.12979.651801334.97220-0.446502.712401.79030K562KRR1
FTSJ3ENSG00000108592.121310.436101041.151200.331802.850801.91350K562MATR3
FTSJ3ENSG00000108592.121171.702901526.01120-0.381203.454002.47090K562METAP2
FTSJ3ENSG00000108592.121626.634902197.88660-0.434206.884905.78090K562NSUN2
FTSJ3ENSG00000108592.121484.443601961.74300-0.402202.528201.73280K562PCBP3
FTSJ3ENSG00000108592.121435.896901899.64810-0.403803.178001.49950K562PKM
FTSJ3ENSG00000108592.121831.967302705.30890-0.562405.974404.69180K562PPIG
FTSJ3ENSG00000108592.121895.944201013.693300.9032019.2450017.56900K562PTBP1
FTSJ3ENSG00000108592.124145.327703322.597300.319103.285802.39750K562PUF60
FTSJ3ENSG00000108592.121229.57780971.781800.339402.578801.76890K562RBM22
FTSJ3ENSG00000108592.12674.898001107.54380-0.714603.924002.74270K562RCC2
FTSJ3ENSG00000108592.121345.987101022.698500.396203.139701.96790K562NELFE
FTSJ3ENSG00000108592.12987.03750740.283900.414904.080403.03540K562SF3B4
FTSJ3ENSG00000108592.12433.21730993.80450-1.1979022.7838020.74580K562SRSF1
FTSJ3ENSG00000108592.121306.346801840.23060-0.494308.553206.49060K562SRSF7
FTSJ3ENSG00000108592.12737.25510965.03080-0.388403.571502.08460K562SSB
FTSJ3ENSG00000108592.121927.705902860.34370-0.569305.706803.82670K562STAU1
FTSJ3ENSG00000108592.12940.113401417.42450-0.592405.266603.82520K562SUPV3L1
FTSJ3ENSG00000108592.122251.056801509.262000.576709.651008.11170K562SYNCRIP
FTSJ3ENSG00000108592.12875.475601240.47470-0.502802.316001.46230K562TRIM56
FTSJ3ENSG00000108592.121913.481802788.63950-0.543403.638501.99630K562TRIP6
FTSJ3ENSG00000108592.121932.987102605.81130-0.430905.873703.99240K562TROVE2
FTSJ3ENSG00000108592.12930.152401500.07040-0.689507.872806.08230K562UCHL5
FTSJ3ENSG00000108592.121856.989102330.45410-0.327604.738603.82410K562UPF1
FTSJ3ENSG00000108592.121356.120201994.11490-0.556305.958804.64790K562WDR3
FTSJ3ENSG00000108592.122166.854101060.527201.030707.422004.52410K562XRCC6
FTSJ3ENSG00000108592.121174.522401527.33510-0.378902.785901.57510K562XRN2
FTSJ3ENSG00000108592.121817.707902676.36860-0.558204.079902.99900K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FTSJ3 is not available on ENCORE database.





8 RBPs can affect the splicing of FTSJ3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEFTSJ3ENSG00000108592.12chr17-618993436189952861899082618992036190117661901312-0.313000.000000.00001excludedK562SRSF1
SEFTSJ3ENSG00000108592.12chr17-619016906190179661901443619015996190199661902097-0.052000.000240.00363excludedK562AQR
SEFTSJ3ENSG00000108592.12chr17-618983896189847561898157618982986189871361899003-0.193000.000000.00000excludedK562AQR
SEFTSJ3ENSG00000108592.12chr17-618993366189952861899082618992036190117661901312-0.092000.000310.03525excludedHepG2SRSF7
SEFTSJ3ENSG00000108592.12chr17-618993436189952861899082618992036190117661901312-0.134000.000000.00009excludedHepG2SRSF1
A3SSFTSJ3ENSG00000108592.12chr17-6190390661904105619039066190403261904195619043180.180000.000000.00000longerK562AQR
A3SSFTSJ3ENSG00000108592.12chr17-6190334761903531619033476190349561903617619036640.234000.000000.00000longerK562AQR
A3SSFTSJ3ENSG00000108592.12chr17-6189934361899574618993436189952861901176619013590.185000.000000.00000longerK562AQR
A3SSFTSJ3ENSG00000108592.12chr17-6189771261897843618977126189779861898198618984750.145000.000000.00000longerK562AQR
A3SSFTSJ3ENSG00000108592.12chr17-6190289561903042619028956190299561903415619034950.412000.000000.00000longerK562AQR
A3SSFTSJ3ENSG00000108592.12chr17-6190361761903792619036176190366461903926619041050.163000.000000.00000longerK562AQR
A3SSFTSJ3ENSG00000108592.12chr17-6189908261899264618990826189920361899343618995280.079000.000000.00000longerK562AQR
A3SSFTSJ3ENSG00000108592.12chr17-6190117661901359619011766190131261901443619015990.188000.000000.00000longerK562AQR
A3SSFTSJ3ENSG00000108592.12chr17-6190218461902326619021846190228961902407619025230.058000.000020.00022longerK562AQR
A3SSFTSJ3ENSG00000108592.12chr17-618981986189847561898198618982986189871361899003-0.242000.000000.00000shorterK562AQR
RIFTSJ3ENSG00000108592.12chr17-6190361761904032619036176190366461903926619040320.270000.002650.01789includedK562PUS1
RIFTSJ3ENSG00000108592.12chr17-6189819861898475618981986189829861898389618984750.077000.000170.00150includedK562PUS1
RIFTSJ3ENSG00000108592.12chr17-6190361761904032619036176190366461903926619040320.127000.007730.07020includedHepG2SF3A3
RIFTSJ3ENSG00000108592.12chr17-6190361761904032619036176190366461903926619040320.068000.005500.04773includedHepG2TAF15
RIFTSJ3ENSG00000108592.12chr17-6190361761904032619036176190366461903926619040320.057000.013630.08012includedHepG2SF3B4
RIFTSJ3ENSG00000108592.12chr17-6190361761904032619036176190366461903926619040320.190000.010450.09189includedK562UTP18
RIFTSJ3ENSG00000108592.12chr17-6189819861898475618981986189829861898389618984750.061000.000320.00549includedK562UTP18
RIFTSJ3ENSG00000108592.12chr17-6189827461898517618982746189829861898389618985170.151000.000000.00000includedK562AQR
RIFTSJ3ENSG00000108592.12chr17-6190361761904032619036176190366461903926619040320.206000.000000.00002includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for FTSJ3 is not avaliable on ENCORE database.