CETN3

General Information

Gene Name       : CETN3
Gene ID             : ENSG00000153140.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CETN3)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CETN3ENSG00000153140.836.9137.2637.08ENCSR000AEF
HepG2CETN3ENSG00000153140.830.7167.2748.99ENCSR985KAT
K562CETN3ENSG00000153140.856.0358.7657.39ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CETN3 is not avaliable on ENCORE database.



Proteins bound to RNA

  • CETN3 RNA is bound by 12 proteins.  







eCLIP assay for CETN3 is not avaliable on ENCORE database.





12 proteins are bound to CETN3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr58968986589689939-3'-UTR,CDS,intron-Distal4.0617110.99840K562BUD13
chr58969516989695272-3'-UTR,CDS,intron-Distal,intron-Proximal4.5638913.05811K562ZNF622
chr58969529189695367-3'-UTR,CDS,intron-Distal,intron-Proximal4.9673113.49586K562UCHL5
chr58969518489695295-3'-UTR,CDS,intron-Distal,intron-Proximal4.8829511.54096HepG2BCLAF1
chr58968966389689746-3'-UTR,intron-Distal,intron-Proximal3.962284.13343HepG2FUBP3
chr58969517289695192-3'-UTR,CDS,intron-Distal,intron-Proximal3.220584.30396K562UCHL5
chr58969530989695367-3'-UTR,CDS,intron-Distal,intron-Proximal5.5490810.47286HepG2BCLAF1
chr58968985189689924-3'-UTR,CDS,intron-Distal3.508145.76104HepG2BCLAF1
chr58968964489689737-3'-UTR,intron-Distal,intron-Proximal5.239695.58762K562CPEB4
chr58969503489695171-3'-UTR,CDS,intron-Distal,intron-Proximal4.715915.82778K562PRPF8
chr58969532289695368-3'-UTR,CDS,intron-Distal,intron-Proximal3.130353.06626K562GRWD1
chr58969532089695367-3'-UTR,CDS,intron-Distal,intron-Proximal3.149355.75243K562ZNF622
chr58970546189705563-5'-UTR,CDS,intron-Distal,intron-Proximal4.1904515.90004K562DDX3X
chr58970150089701512-CDS,intron-Distal,intron-Proximal4.698864.78529HepG2BCLAF1
chr58970150189701551-CDS,intron-Distal,intron-Proximal3.105254.61701K562ZNF622
chr58970150189701552-CDS,intron-Distal,intron-Proximal3.925599.16086K562UCHL5
chr58970356689703617-CDS,intron-Distal3.566168.10543K562UCHL5
chr58970351789703572-CDS,intron-Distal5.223048.07539HepG2BCLAF1
chr58969013689690233-intron-Distal3.557524.72639K562KHSRP
chr58969265389692728-intron-Distal4.762775.51162HepG2U2AF2
chr58969435989694446-intron-Distal3.824833.80954K562HNRNPL
chr58969003889690116-intron-Distal4.114713.42844K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CETN3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CETN3 is not available on ENCORE database.

  • 126 RBPs can affect the levels of CETN3.  








The Knockdown/knockout RNA-Seq assay for CETN3 is not available on ENCORE database.





126 RBPs can affect the gene expression of CETN3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CETN3ENSG00000153140.4501.56060713.99790-0.509503.398602.35970HepG2ABCF1
CETN3ENSG00000153140.4417.82500610.22750-0.546406.122005.28970HepG2ACO1
CETN3ENSG00000153140.4344.20140613.09350-0.8329011.7998010.36100HepG2AKAP8L
CETN3ENSG00000153140.4633.18620884.38020-0.482003.429102.55580HepG2ASCC1
CETN3ENSG00000153140.4750.34310941.30640-0.327103.378402.63300HepG2AUH
CETN3ENSG00000153140.4349.52200510.40010-0.546202.752501.85560HepG2BCLAF1
CETN3ENSG00000153140.4264.98380480.95600-0.860007.569706.63970HepG2BOP1
CETN3ENSG00000153140.4388.64820534.88340-0.460803.114901.80930HepG2BUD13
CETN3ENSG00000153140.4456.17270610.09360-0.419504.091103.31190HepG2CKAP4
CETN3ENSG00000153140.4261.05510441.54720-0.758205.506104.56660HepG2CPSF6
CETN3ENSG00000153140.4443.62070587.91760-0.406302.711701.61720HepG2CPSF7
CETN3ENSG00000153140.4747.24950959.41690-0.360603.531902.82430HepG2CELF1
CETN3ENSG00000153140.4353.72430536.33670-0.600505.434203.86190HepG2DDX1
CETN3ENSG00000153140.4749.673901023.88140-0.449703.140402.47840HepG2DDX3X
CETN3ENSG00000153140.4391.34090577.42940-0.561202.763101.99050HepG2DDX55
CETN3ENSG00000153140.4403.20510567.54230-0.493203.284802.19140HepG2DDX5
CETN3ENSG00000153140.4412.55900879.49450-1.0921012.2616011.07090HepG2DDX6
CETN3ENSG00000153140.4362.68240507.23720-0.484003.252302.19240HepG2DHX30
CETN3ENSG00000153140.4401.38250583.82210-0.540605.137504.26670HepG2DKC1
CETN3ENSG00000153140.4423.16200525.91760-0.313602.023601.41240HepG2DNAJC21
CETN3ENSG00000153140.4296.56320521.23130-0.8136011.3430010.12280HepG2DNAJC2
CETN3ENSG00000153140.4402.30640538.82920-0.421502.146201.33380HepG2EEF2
CETN3ENSG00000153140.4419.60650845.51990-1.0108011.7999010.62860HepG2EIF2S1
CETN3ENSG00000153140.4410.33990541.57170-0.400302.653901.51230HepG2EIF2S2
CETN3ENSG00000153140.4309.82460437.42920-0.497602.422201.57140HepG2EIF3D
CETN3ENSG00000153140.4649.06380934.41850-0.525703.648102.91620HepG2EIF4A3
CETN3ENSG00000153140.4640.96110909.75010-0.505202.806302.11270HepG2EIF4B
CETN3ENSG00000153140.4768.996101017.74620-0.404304.676003.63080HepG2EIF4G1
CETN3ENSG00000153140.4811.632701080.73950-0.413104.724203.97700HepG2ETF1
CETN3ENSG00000153140.4561.23480720.95060-0.361302.007901.34650HepG2FIP1L1
CETN3ENSG00000153140.4719.77430942.72980-0.389302.551101.88570HepG2FXR1
CETN3ENSG00000153140.4522.14530874.55130-0.744106.846105.81930HepG2G3BP1
CETN3ENSG00000153140.4658.84100928.40760-0.494803.781202.73020HepG2G3BP2
CETN3ENSG00000153140.4286.23300389.48010-0.444402.323501.51020HepG2GEMIN5
CETN3ENSG00000153140.4430.94280624.62850-0.535503.057501.98390HepG2GNB2L1
CETN3ENSG00000153140.4369.74830500.53750-0.436902.164601.59470HepG2GPKOW
CETN3ENSG00000153140.4322.78900530.95550-0.718003.417502.70880HepG2HNRNPA1
CETN3ENSG00000153140.4779.85210948.08120-0.281802.327001.46160HepG2HNRNPA2B1
CETN3ENSG00000153140.4312.98660590.57580-0.916009.298908.08830HepG2HNRNPC
CETN3ENSG00000153140.4555.59840885.48960-0.672406.499105.45920HepG2HNRNPK
CETN3ENSG00000153140.4724.17030939.72550-0.375904.589703.73860HepG2HNRNPL
CETN3ENSG00000153140.4364.73810497.38100-0.447502.971501.98630HepG2HNRNPM
CETN3ENSG00000153140.4437.45310586.67230-0.423403.820603.11870HepG2HNRNPU
CETN3ENSG00000153140.4386.96790888.97340-1.1999016.6212015.13260HepG2IGF2BP2
CETN3ENSG00000153140.4434.84020599.26880-0.462705.076804.10890HepG2ILF2
CETN3ENSG00000153140.4443.11770890.61770-1.007107.839706.43080HepG2LARP4
CETN3ENSG00000153140.4419.97360611.81040-0.542803.808902.47400HepG2LARP7
CETN3ENSG00000153140.4689.69070943.05860-0.451403.057802.36860HepG2MAGOH
CETN3ENSG00000153140.4570.17890948.34650-0.734006.390005.46380HepG2MATR3
CETN3ENSG00000153140.4358.76380583.42050-0.701506.719905.51300HepG2MSI2
CETN3ENSG00000153140.4490.22420970.69320-0.9856011.4800010.23300HepG2NCBP2
CETN3ENSG00000153140.4772.130801022.94800-0.405802.304501.60850HepG2NOL12
CETN3ENSG00000153140.4242.57380372.43310-0.618602.398401.58300HepG2PABPC1
CETN3ENSG00000153140.4529.66410864.50160-0.706806.481905.38880HepG2PABPC4
CETN3ENSG00000153140.4392.95430580.72270-0.563505.795904.63510HepG2PARN
CETN3ENSG00000153140.4280.59190829.89760-1.5645040.8088038.97200HepG2PCBP1
CETN3ENSG00000153140.4410.37070644.60590-0.651503.560002.38980HepG2PCBP2
CETN3ENSG00000153140.4355.61910523.26730-0.557205.103004.13070HepG2PPIL4
CETN3ENSG00000153140.4308.06450445.61390-0.532602.512701.74120HepG2PRPF8
CETN3ENSG00000153140.4467.87170844.44620-0.8519014.3204013.26700HepG2PTBP1
CETN3ENSG00000153140.4479.77240976.49130-1.0253016.2724014.99110HepG2PUF60
CETN3ENSG00000153140.4467.807201036.58620-1.1479033.2635031.67060HepG2PUM1
CETN3ENSG00000153140.4650.457301035.83050-0.671308.399007.25880HepG2PUM2
CETN3ENSG00000153140.4467.84520621.55610-0.409903.843203.14070HepG2PUS1
CETN3ENSG00000153140.4692.04110914.56800-0.402203.701002.99450HepG2QKI
CETN3ENSG00000153140.4384.65450622.17490-0.693803.327302.55740HepG2RAVER1
CETN3ENSG00000153140.4624.46750903.29950-0.532606.211905.51110HepG2RBM22
CETN3ENSG00000153140.4472.00490939.79220-0.9935019.2345018.05850HepG2NELFE
CETN3ENSG00000153140.4660.63110875.28020-0.405904.223003.48290HepG2RECQL
CETN3ENSG00000153140.4282.14950449.85010-0.673005.286904.38330HepG2RPLP0
CETN3ENSG00000153140.4160.05400425.62010-1.4110017.1423015.80320HepG2RPS19
CETN3ENSG00000153140.4403.93570680.41600-0.752306.403805.21700HepG2RPS2
CETN3ENSG00000153140.4249.09890440.82140-0.823504.999403.97590HepG2RRP9
CETN3ENSG00000153140.4324.01410522.46590-0.689307.939006.93260HepG2SAFB2
CETN3ENSG00000153140.4137.71950427.20420-1.6332020.1036017.76230HepG2SERBP1
CETN3ENSG00000153140.4367.02570769.05250-1.067203.286001.77710HepG2SF1
CETN3ENSG00000153140.4398.92850629.07540-0.657104.175103.33740HepG2SF3A3
CETN3ENSG00000153140.4602.89070879.18750-0.544306.863505.99850HepG2SF3B4
CETN3ENSG00000153140.4705.77510936.29790-0.407805.042704.14080HepG2SLBP
CETN3ENSG00000153140.4359.35910609.29750-0.7617011.080709.92920HepG2SMN1
CETN3ENSG00000153140.4435.44240633.76420-0.541503.118502.09570HepG2SMNDC1
CETN3ENSG00000153140.4310.60510686.82260-1.144904.137702.46010HepG2SNRNP200
CETN3ENSG00000153140.4484.27360964.14000-0.9934021.0888019.57760HepG2SRSF5
CETN3ENSG00000153140.4282.10470410.24600-0.540304.470703.61850HepG2SRSF7
CETN3ENSG00000153140.4436.31840746.57580-0.7749012.6279011.60000HepG2SRSF9
CETN3ENSG00000153140.4730.81500885.81900-0.277502.468001.97790HepG2SSB
CETN3ENSG00000153140.4338.57100481.48320-0.508002.879601.62160HepG2STAU1
CETN3ENSG00000153140.4691.384301096.49530-0.6653012.4408011.28500HepG2SUCLG1
CETN3ENSG00000153140.4324.06250486.76050-0.586904.433303.25610HepG2SUPT6H
CETN3ENSG00000153140.4547.97850824.83280-0.590007.185706.35530HepG2TAF15
CETN3ENSG00000153140.4228.23080465.55690-1.028509.677208.44040HepG2TARDBP
CETN3ENSG00000153140.4513.93680757.92100-0.560505.651704.46900HepG2TIA1
CETN3ENSG00000153140.4279.29340570.11430-1.0295013.7846012.81500HepG2TIAL1
CETN3ENSG00000153140.4250.74660575.15440-1.1977021.3268019.94590HepG2TRIM56
CETN3ENSG00000153140.4583.59970953.98660-0.709008.796107.08240HepG2TUFM
CETN3ENSG00000153140.4492.44040616.68670-0.324601.850201.32560HepG2U2AF1
CETN3ENSG00000153140.4310.16830799.57670-1.366204.996103.64320HepG2U2AF2
CETN3ENSG00000153140.4714.224601009.77720-0.499603.389302.46200HepG2UBE2L3
CETN3ENSG00000153140.4353.31020557.89320-0.659107.563306.50170HepG2UPF1
CETN3ENSG00000153140.4279.18520538.62470-0.9481012.5582011.42320HepG2UTP3
CETN3ENSG00000153140.4353.90600613.57640-0.7939012.2172011.27210HepG2ZNF622
CETN3ENSG00000153140.4947.220001686.53220-0.8323012.2474011.14010K562AQR
CETN3ENSG00000153140.4592.31920769.82860-0.378202.321501.52920K562BOP1
CETN3ENSG00000153140.4226.68640360.52750-0.669404.619403.18160K562CCAR1
CETN3ENSG00000153140.4501.58870818.55770-0.706608.232506.86650K562CPSF6
CETN3ENSG00000153140.4526.15760666.01860-0.340102.382601.41160K562CSTF2
CETN3ENSG00000153140.4824.008801324.62020-0.6848013.4128012.08900K562DDX47
CETN3ENSG00000153140.4663.74430831.25270-0.324702.617301.35950K562DDX6
CETN3ENSG00000153140.4282.48750403.57760-0.514703.021601.63340K562DHX30
CETN3ENSG00000153140.4414.17660660.54560-0.673405.435304.13000K562EFTUD2
CETN3ENSG00000153140.4714.31620943.24380-0.401104.123003.27070K562EIF2S2
CETN3ENSG00000153140.4461.27460707.30280-0.616704.245002.92620K562EIF3D
CETN3ENSG00000153140.4591.79760971.13700-0.714605.820604.68130K562EIF3G
CETN3ENSG00000153140.4457.87440856.58020-0.903608.002006.60520K562EIF4A3
CETN3ENSG00000153140.41528.247602054.91950-0.427204.231503.07790K562EIF4G2
CETN3ENSG00000153140.4517.62530747.71620-0.530604.921303.10200K562EWSR1
CETN3ENSG00000153140.4546.96380832.84550-0.606604.030702.99480K562FMR1
CETN3ENSG00000153140.4533.62900705.90400-0.403602.415801.56560K562FTO
CETN3ENSG00000153140.4617.87190890.80980-0.527806.250305.39530K562FXR1
CETN3ENSG00000153140.4538.61530781.52850-0.537004.650403.62560K562GPKOW
CETN3ENSG00000153140.4286.66670736.53070-1.361408.644607.64050K562HNRNPC
CETN3ENSG00000153140.4761.208301197.14630-0.653208.519806.59310K562HNRNPL
CETN3ENSG00000153140.41379.502401033.585400.416403.590602.68830K562HSPD1
CETN3ENSG00000153140.4949.968001357.07940-0.514603.887602.58630K562IGF2BP2
CETN3ENSG00000153140.4862.489701426.42420-0.7258011.115409.35400K562MAGOH
CETN3ENSG00000153140.41127.129701423.55880-0.336802.984002.02170K562MATR3
CETN3ENSG00000153140.4551.17640762.85590-0.468903.799102.76090K562METAP2
CETN3ENSG00000153140.4686.75320922.84810-0.426304.921303.86620K562MTPAP
CETN3ENSG00000153140.4759.655001025.28190-0.432606.218805.16060K562NSUN2
CETN3ENSG00000153140.4832.512401269.19840-0.608405.330303.96130K562PCBP2
CETN3ENSG00000153140.4602.74830795.15760-0.399702.390301.61880K562PCBP3
CETN3ENSG00000153140.41066.56030865.608000.301102.004601.31030K562PPIG
CETN3ENSG00000153140.4950.674001759.23180-0.887904.322702.34790K562PPP1R8
CETN3ENSG00000153140.4489.25360642.78550-0.393802.181201.51140K562PRPF8
CETN3ENSG00000153140.4740.346001385.84640-0.9045017.2612015.66880K562PTBP1
CETN3ENSG00000153140.41468.573602241.98700-0.610408.308506.89190K562PUF60
CETN3ENSG00000153140.41795.802502336.51400-0.379704.761103.48980K562PUM2
CETN3ENSG00000153140.4230.70560384.52700-0.737003.478601.30980K562RBFOX2
CETN3ENSG00000153140.4751.211601328.96340-0.8230012.1451010.20280K562RBM22
CETN3ENSG00000153140.4979.222501295.40760-0.403703.124401.62050K562RBM34
CETN3ENSG00000153140.4851.342201398.49750-0.716108.830406.81350K562NELFE
CETN3ENSG00000153140.4342.10390654.79180-0.936608.408606.96920K562RPS19
CETN3ENSG00000153140.4501.77170673.73440-0.425102.455001.51750K562RPS3
CETN3ENSG00000153140.4714.448501353.12360-0.921404.148102.59470K562SF1
CETN3ENSG00000153140.4681.524801011.81840-0.570107.789306.47680K562SF3A3
CETN3ENSG00000153140.4531.27770743.23480-0.484403.059502.03600K562SF3B1
CETN3ENSG00000153140.4899.443101650.19300-0.875504.345902.56290K562SFPQ
CETN3ENSG00000153140.4768.931201553.35680-1.014505.470403.55220K562SNRNP200
CETN3ENSG00000153140.4982.451701283.01560-0.385102.592101.58170K562SRSF5
CETN3ENSG00000153140.4533.58570708.21290-0.408503.923302.51110K562SRSF7
CETN3ENSG00000153140.41136.065001858.48420-0.710102.984201.48760K562SUPT6H
CETN3ENSG00000153140.4626.446701375.00730-1.1342019.9584017.71670K562TARDBP
CETN3ENSG00000153140.4950.567901326.33790-0.480605.465004.25590K562TIA1
CETN3ENSG00000153140.4455.87920674.46850-0.565102.823501.86610K562TRIM56
CETN3ENSG00000153140.4730.531701087.13490-0.573508.426207.25530K562UPF1
CETN3ENSG00000153140.4737.44100930.21590-0.335002.518101.68020K562WDR3
CETN3ENSG00000153140.4760.00240967.39230-0.348103.219002.31280K562WDR43
CETN3ENSG00000153140.41552.561801899.71200-0.291102.262701.49480K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CETN3 is not available on ENCORE database.





6 RBPs can affect the splicing of CETN3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECETN3ENSG00000153140.4chr5-8969230989692381896895268968992489695174896953660.093000.000040.01809includedHepG2ILF3
SECETN3ENSG00000153140.4chr5-8969230989692381896895268968992489695174896953660.055000.000210.02308includedHepG2QKI
SECETN3ENSG00000153140.4chr5-8969230989692381896895268968992489695174896953660.099000.000000.00000includedHepG2SF3B4
SECETN3ENSG00000153140.4chr5-8969230989692381896895268968992489695174896952880.065000.000000.00019includedK562U2AF2
SECETN3ENSG00000153140.4chr5-8969230989692381896895268968992489695174896952880.082000.000020.00212includedHepG2HNRNPU
SECETN3ENSG00000153140.4chr5-8969230989692381896895268968992489695174896953660.059000.000300.02455includedHepG2SRSF9

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CETN3 is not avaliable on ENCORE database.