BPHL

General Information

Gene Name       : BPHL
Gene ID             : ENSG00000137274.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: BPHL)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878BPHLENSG00000137274.126.827.977.39ENCSR000AEF
HepG2BPHLENSG00000137274.1218.6622.5420.60ENCSR985KAT
K562BPHLENSG00000137274.125.954.465.21ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for BPHL is not avaliable on ENCORE database.



Proteins bound to RNA
  • BPHL RNA is bound by 21 proteins.  







eCLIP assay for BPHL is not avaliable on ENCORE database.





21 proteins are bound to BPHL RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr631375933137731+3'-UTR,CDS,intron-Proximal3.3167110.35084HepG2BCLAF1
chr631407353140800+3'-UTR,CDS,intron-Proximal4.752464.02817HepG2PRPF8
chr631376943137757+3'-UTR,CDS,intron-Distal,intron-Proximal4.795854.52669HepG2EFTUD2
chr631375913137687+3'-UTR,CDS,intron-Proximal4.267188.68543HepG2PPIG
chr631190463119122+5'-UTR,CDS,intron-Distal,intron-Proximal4.5624220.13125HepG2PRPF8
chr631292773129340+5'-UTR,CDS,intron-Proximal3.305064.68592HepG2PPIG
chr631294123129518+5'-UTR,CDS,intron-Proximal3.787886.22597HepG2EFTUD2
chr631239703124106+5'-UTR,CDS,intron-Distal,intron-Proximal4.067874.31512K562KHSRP
chr631293683129482+5'-UTR,CDS,intron-Proximal4.183717.38067HepG2PRPF8
chr631292783129426+5'-UTR,CDS,intron-Proximal4.316484.83675HepG2G3BP1
chr631189653119024+5'-UTR,CDS,intron-Distal3.040463.41568HepG2NCBP2
chr631190723119205+5'-UTR,CDS,intron-Distal,intron-Proximal3.912913.84437HepG2PRPF4
chr631394663139552+intron-Distal4.082494.02395HepG2KHSRP
chr631470883147152+intron-Distal3.090086.57490HepG2CSTF2T
chr631310943131199+intron-Distal4.776696.63948HepG2MATR3
chr631355553135610+intron-Distal4.894736.08205HepG2MATR3
chr631468543146926+intron-Distal4.949693.72755K562EIF4G2
chr631312603131348+intron-Distal4.4108121.47449HepG2SUGP2
chr631339173133977+intron-Distal3.007707.70954HepG2SUGP2
chr631313483131392+intron-Distal5.5985013.97739HepG2SUGP2
chr631318163131956+intron-Distal4.156648.08030HepG2QKI
chr631315433131586+intron-Distal5.431735.01910HepG2MATR3
chr631325503132657+intron-Distal3.6729814.73743HepG2SUGP2
chr631450463145152+intron-Distal3.639966.73713HepG2CSTF2T
chr631360003136031+intron-Distal3.386243.10961HepG2MATR3
chr631405063140602+intron-Distal,intron-Proximal3.299973.60305HepG2SF3B4
chr631318783131915+intron-Distal3.442788.63136HepG2SUGP2
chr631337343133864+intron-Distal3.296695.37989HepG2HNRNPK
chr631325513132638+intron-Distal4.110286.29905HepG2MATR3
chr631470983147159+intron-Distal4.919774.56734HepG2FAM120A
chr631311993131237+intron-Distal4.898935.01910HepG2MATR3
chr631470043147064+intron-Distal4.477545.36332HepG2CSTF2T
chr631320173132112+intron-Distal3.5267513.70899HepG2SUGP2
chr631319153131957+intron-Distal3.652478.63136HepG2SUGP2
chr631471113147181+intron-Distal3.230873.84340K562CSTF2T
chr631326573132727+intron-Distal4.3902712.76219HepG2SUGP2
chr631366503136702+intron-Distal3.7567110.18635HepG2SUGP2
chr631355993135663+intron-Distal3.505069.32175HepG2SUGP2
chr631198593119940+intron-Distal3.331745.61197HepG2HNRNPL
chr631331723133196+intron-Distal3.749706.02668HepG2SUGP2
chr631323573132414+intron-Distal5.042923.62238HepG2MATR3
chr631337293133828+intron-Distal5.036025.01910HepG2MATR3
chr631333063133359+intron-Distal4.0993916.68910HepG2SUGP2
chr631505733150639+intron-Distal4.469234.12150K562LSM11
chr631468253146922+intron-Distal4.436825.40707K562CSTF2T
chr631337453133770+intron-Distal3.275017.32436HepG2SUGP2
chr631363483136424+intron-Distal3.7011316.09653HepG2SUGP2
chr631356633135698+intron-Distal4.229678.56181HepG2SUGP2
chr631452043145259+intron-Distal5.266909.35257HepG2CSTF2T
chr631323593132438+intron-Distal3.3499620.26423HepG2SUGP2
chr631327723132808+intron-Distal4.755976.07481HepG2SUGP2
chr631358763135942+intron-Distal4.4410016.60038HepG2SUGP2
chr631190903119214+intron-Distal,intron-Proximal3.800538.01217HepG2EFTUD2
chr631315093131615+intron-Distal4.2726626.13653HepG2SUGP2
chr631361503136198+intron-Distal3.401033.68462HepG2MATR3
chr631312143131332+intron-Distal3.595843.71597K562MATR3
chr631312553131336+intron-Distal3.223353.99165HepG2PTBP1
chr631257523125834+intron-Distal4.271575.19823K562KHSRP
chr631258503125923+intron-Distal3.662935.86177HepG2U2AF2
chr631468073146916+intron-Distal4.087567.70912HepG2PRPF4
chr631361393136205+intron-Distal3.7389311.93689HepG2SUGP2
chr631333593133410+intron-Distal4.6962412.65415HepG2SUGP2
chr631312623131328+intron-Distal3.948836.98117HepG2MATR3
chr631318313131878+intron-Distal4.6473516.84385HepG2SUGP2
chr631468153146923+intron-Distal6.3608322.23094HepG2FAM120A
chr631314463131508+intron-Distal4.313025.07626HepG2PTBP1
chr631355013135530+intron-Distal3.800067.03905HepG2SUGP2
chr631358873135928+intron-Distal4.993155.01910HepG2MATR3
chr631317763131831+intron-Distal3.7610612.97294HepG2SUGP2
chr631362623136348+intron-Distal4.6736923.05585HepG2SUGP2
chr631359923136056+intron-Distal5.5259725.44651HepG2SUGP2
chr631362633136305+intron-Distal3.121673.93186HepG2MATR3
chr631357903135850+intron-Distal4.6874013.34139HepG2SUGP2
chr631311023131145+intron-Distal3.611278.99518HepG2SUGP2
chr631311453131223+intron-Distal3.1650411.75903HepG2SUGP2
chr631468343146920+intron-Distal3.347758.76879HepG2CSTF2T
chr631337703133818+intron-Distal3.6850510.87910HepG2SUGP2
chr631365933136644+intron-Distal4.0999113.14447HepG2SUGP2
chr631468243146921+intron-Distal3.743133.98726HepG2RBFOX2
chr631317233131776+intron-Distal3.5951411.41958HepG2SUGP2
chr631356103135699+intron-Distal3.549764.23155HepG2MATR3
chr631356983135749+intron-Distal4.5949710.04921HepG2SUGP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for BPHL is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for BPHL is not available on ENCORE database.

  • 108 RBPs can affect the levels of BPHL.  








The Knockdown/knockout RNA-Seq assay for BPHL is not available on ENCORE database.





108 RBPs can affect the gene expression of BPHL :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
BPHLENSG00000137274.8370.95660526.96020-0.506403.407302.22560HepG2AATF
BPHLENSG00000137274.8971.73260626.497500.633204.755903.55040HepG2ABCF1
BPHLENSG00000137274.8502.86180604.88060-0.266501.902601.38100HepG2ACO1
BPHLENSG00000137274.8620.074801405.83930-1.1809011.9601010.93060HepG2AKAP1
BPHLENSG00000137274.8734.45790418.597600.811003.398101.54880HepG2APOBEC3C
BPHLENSG00000137274.8635.40400432.445700.555103.173402.16940HepG2BCCIP
BPHLENSG00000137274.8546.03950375.752600.539103.171002.20680HepG2BCLAF1
BPHLENSG00000137274.8243.97870341.37220-0.484602.485901.91550HepG2BOP1
BPHLENSG00000137274.8790.15300500.626100.658307.500706.31510HepG2CALR
BPHLENSG00000137274.8871.14180584.695600.575103.728802.58420HepG2CCAR1
BPHLENSG00000137274.81545.889701105.163700.484104.359503.40200HepG2CIRBP
BPHLENSG00000137274.8602.59210313.386600.943109.456208.25710HepG2CPSF6
BPHLENSG00000137274.8683.63250875.60250-0.357103.321002.62970HepG2CELF1
BPHLENSG00000137274.81300.53810941.482200.466008.234407.05900HepG2DAZAP1
BPHLENSG00000137274.8791.39000559.377400.500506.807905.58940HepG2DDX19B
BPHLENSG00000137274.8979.75700581.229900.753209.161608.00120HepG2DDX21
BPHLENSG00000137274.8866.69690568.916600.607206.561205.16120HepG2DDX24
BPHLENSG00000137274.8719.82560397.823400.855406.119904.28900HepG2DDX27
BPHLENSG00000137274.8479.27510322.084200.573303.623402.02560HepG2DDX28
BPHLENSG00000137274.81187.71320547.645501.1168010.291108.48900HepG2DDX5
BPHLENSG00000137274.8424.323901156.67760-1.4467015.0674013.78290HepG2DDX6
BPHLENSG00000137274.8727.94870391.127200.896105.149303.83860HepG2DHX30
BPHLENSG00000137274.81370.56120578.678401.2438038.1551036.40420HepG2DKC1
BPHLENSG00000137274.8549.94770401.904700.452304.471003.67790HepG2DNAJC2
BPHLENSG00000137274.8815.464901112.18440-0.447702.951702.33910HepG2EIF2S1
BPHLENSG00000137274.8704.87590548.970100.360502.596301.55010HepG2EIF3G
BPHLENSG00000137274.8690.227001196.58650-0.793806.419305.40350HepG2EIF4B
BPHLENSG00000137274.8982.05940542.548900.856009.768007.91070HepG2ESF1
BPHLENSG00000137274.81338.929101088.532500.298603.277002.63140HepG2ETF1
BPHLENSG00000137274.8748.10660590.978900.340002.321601.55720HepG2EWSR1
BPHLENSG00000137274.8779.85010553.964100.493304.300302.92090HepG2FASTKD2
BPHLENSG00000137274.8521.75810353.900400.559903.220701.85470HepG2FKBP4
BPHLENSG00000137274.8599.60590313.948100.933403.527902.37600HepG2FTO
BPHLENSG00000137274.8859.72100696.461200.303702.140501.44180HepG2FUBP3
BPHLENSG00000137274.8697.172601239.86860-0.830608.128306.98920HepG2FXR1
BPHLENSG00000137274.81768.326701220.996500.534205.315204.06890HepG2G3BP2
BPHLENSG00000137274.8897.36280355.216201.3369016.8894015.43550HepG2GPKOW
BPHLENSG00000137274.8752.05550409.420300.8772010.215809.09080HepG2HNRNPA1
BPHLENSG00000137274.8623.78120388.287600.683804.508702.57440HepG2HNRNPD
BPHLENSG00000137274.8646.698901164.39460-0.848408.417607.25230HepG2HNRNPK
BPHLENSG00000137274.8726.98360857.61650-0.238402.064101.47140HepG2HNRNPL
BPHLENSG00000137274.81087.95120338.992201.6822032.9134031.12090HepG2HNRNPLL
BPHLENSG00000137274.8589.97090436.299300.435202.759701.81060HepG2HNRNPM
BPHLENSG00000137274.8829.04930512.611900.693508.197007.01220HepG2IGF2BP1
BPHLENSG00000137274.8760.22310462.092300.7181012.5286011.09330HepG2ILF2
BPHLENSG00000137274.8728.62840436.979800.737504.935903.15020HepG2ILF3
BPHLENSG00000137274.8775.64060552.868400.488406.384304.86760HepG2KIF1C
BPHLENSG00000137274.8923.66550597.079600.629306.178104.39660HepG2LIN28B
BPHLENSG00000137274.8737.09560345.798001.091808.660406.92290HepG2MTPAP
BPHLENSG00000137274.8752.25890933.57210-0.311502.512901.78830HepG2NOL12
BPHLENSG00000137274.8698.75230300.604701.2168010.439009.06200HepG2NSUN2
BPHLENSG00000137274.8271.01890409.64060-0.596002.469001.64020HepG2PABPC1
BPHLENSG00000137274.81548.993401137.224100.445703.578402.76360HepG2PABPC4
BPHLENSG00000137274.8599.361601129.66200-0.9144021.0032019.58390HepG2PCBP1
BPHLENSG00000137274.8815.16210575.175400.503003.981601.91160HepG2PES1
BPHLENSG00000137274.8554.49350403.488200.458503.827902.97380HepG2PPIL4
BPHLENSG00000137274.8824.35120566.758800.540405.423604.37530HepG2PRPF4
BPHLENSG00000137274.8698.004101149.44250-0.7196013.3157012.29510HepG2PTBP1
BPHLENSG00000137274.8684.89260946.02630-0.466006.883406.03380HepG2PUM1
BPHLENSG00000137274.8993.84860616.094100.6898012.7185011.56130HepG2PUS1
BPHLENSG00000137274.8997.485801244.94030-0.319703.008402.36160HepG2QKI
BPHLENSG00000137274.8353.26620671.93280-0.927605.559604.58120HepG2RAVER1
BPHLENSG00000137274.8706.412501129.83850-0.677508.981207.81990HepG2RBM25
BPHLENSG00000137274.81029.07690660.038100.640604.045102.90700HepG2RPS10
BPHLENSG00000137274.8869.39130449.850300.950508.552107.17160HepG2RPS3A
BPHLENSG00000137274.8675.26170402.872700.745007.319006.34280HepG2SAFB2
BPHLENSG00000137274.8725.80740427.513900.763504.699302.72160HepG2SBDS
BPHLENSG00000137274.8503.65830763.91130-0.601003.720902.93490HepG2SF3A3
BPHLENSG00000137274.8538.10580335.516900.681405.399404.43770HepG2SF3B1
BPHLENSG00000137274.8928.722201196.77330-0.365804.326803.61180HepG2SF3B4
BPHLENSG00000137274.81039.26250854.504100.282302.995502.26850HepG2SLBP
BPHLENSG00000137274.8604.72050373.328000.695703.796502.87560HepG2SNRNP70
BPHLENSG00000137274.8823.768001027.60560-0.319003.227502.69980HepG2SRFBP1
BPHLENSG00000137274.8926.588301249.14960-0.430906.205305.56700HepG2SRSF1
BPHLENSG00000137274.8655.77830879.91030-0.424104.565603.79600HepG2SRSF5
BPHLENSG00000137274.8507.997101016.23030-1.0003024.0234022.69610HepG2SRSF9
BPHLENSG00000137274.82379.38910892.212101.4150071.9975070.28330HepG2SSB
BPHLENSG00000137274.8664.13270422.304100.653104.358802.83770HepG2STAU1
BPHLENSG00000137274.8672.51080426.943800.655406.274804.89690HepG2SUPT6H
BPHLENSG00000137274.8917.05130423.261601.1154012.5281011.26370HepG2SUPV3L1
BPHLENSG00000137274.8699.20000330.497301.0810013.4975012.08940HepG2TARDBP
BPHLENSG00000137274.81054.33750697.997400.594902.338901.35750HepG2TBRG4
BPHLENSG00000137274.8895.06110439.632301.0256018.0957017.02350HepG2TIAL1
BPHLENSG00000137274.8170.39330250.02890-0.553202.519301.79530HepG2UCHL5
BPHLENSG00000137274.8857.56080677.471900.340003.404302.64340HepG2UPF1
BPHLENSG00000137274.8753.32990387.559700.958807.399205.69960HepG2UPF2
BPHLENSG00000137274.8651.52040402.915100.693204.490703.08120HepG2XPO5
BPHLENSG00000137274.8455.36970660.74160-0.537002.756101.49370HepG2XRCC5
BPHLENSG00000137274.8512.71320738.94600-0.527302.889901.80850HepG2XRCC6
BPHLENSG00000137274.81116.00230416.654901.4213022.6889020.70470HepG2XRN2
BPHLENSG00000137274.8746.49460559.359300.416303.840603.07140HepG2ZC3H8
BPHLENSG00000137274.81207.53370745.090300.6965016.2721015.22110HepG2ZNF622
BPHLENSG00000137274.8104.66210167.87580-0.681702.875702.29790K562AGGF1
BPHLENSG00000137274.897.04990174.67790-0.847903.968803.18540K562AKAP8L
BPHLENSG00000137274.8124.25310202.36330-0.703702.588002.01600K562AQR
BPHLENSG00000137274.8128.89110187.99380-0.544502.447201.63020K562DKC1
BPHLENSG00000137274.859.59280107.86860-0.856102.795901.87800K562EFTUD2
BPHLENSG00000137274.858.86670115.49030-0.972203.295002.15930K562EIF3D
BPHLENSG00000137274.861.44080132.85440-1.112604.480203.73930K562HNRNPC
BPHLENSG00000137274.8244.09480157.905600.628303.298802.13360K562HNRNPL
BPHLENSG00000137274.869.27600128.68200-0.893403.373901.80440K562LARP7
BPHLENSG00000137274.894.63400149.84290-0.663002.682801.85540K562MAGOH
BPHLENSG00000137274.885.61200145.57030-0.765802.342901.54730K562NAA15
BPHLENSG00000137274.865.42780133.33520-1.027104.125202.92410K562PCBP2
BPHLENSG00000137274.8204.19890136.733800.578502.108601.38180K562PCBP3
BPHLENSG00000137274.852.23700104.96860-1.006802.989702.21040K562PRPF8
BPHLENSG00000137274.8162.09720274.57030-0.760303.607002.67860K562PUF60
BPHLENSG00000137274.8423.78390286.149400.566504.024402.86260K562PUM2
BPHLENSG00000137274.890.08690173.26440-0.943603.715703.09980K562PUS1
BPHLENSG00000137274.880.42120168.79360-1.069605.621204.80130K562RBM15
BPHLENSG00000137274.8251.31490146.926600.774304.529103.09490K562NELFE
BPHLENSG00000137274.878.52020142.70640-0.861903.430402.64880K562SRSF1
BPHLENSG00000137274.8239.48290170.043100.493902.436001.76080K562UPF1
BPHLENSG00000137274.8172.35840109.532800.653902.483201.35740K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for BPHL is not available on ENCORE database.





11 RBPs can affect the splicing of BPHL :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEBPHLENSG00000137274.8chr6+3119518311974631186093119081312389031239940.241000.000250.02764includedHepG2G3BP1
SEBPHLENSG00000137274.8chr6+3150256315037931382743140743315272131532800.069000.000190.02165includedHepG2QKI
SEBPHLENSG00000137274.8chr6+3150256315037931382743140743315272131532800.066000.000270.04743includedHepG2TIA1
SEBPHLENSG00000137274.8chr6+3119518311974631186093119081312389031239940.190000.002750.08917includedHepG2MATR3
SEBPHLENSG00000137274.8chr6+3150256315037931406193140743315272131532800.095000.000020.00349includedHepG2DDX6
SEBPHLENSG00000137274.8chr6+3150256315037931382743140743315272131532800.080000.000130.02949includedHepG2RBM15
SEBPHLENSG00000137274.8chr6+3150256315037931406193140743315272131532800.110000.000000.00047includedHepG2TAF15
SEBPHLENSG00000137274.8chr6+3119518311974631186093119081312389031239940.288000.000750.07321includedHepG2TAF15
SEBPHLENSG00000137274.8chr6+3150256315037931406193140743315272131532800.058000.000140.04056includedHepG2FUBP3
SEBPHLENSG00000137274.8chr6+3150256315037931382743140743315272131532800.233000.000000.00011includedHepG2HNRNPC
SEBPHLENSG00000137274.8chr6+3150256315037931406193140743315272131532800.080000.000410.03127includedHepG2SRSF9
SEBPHLENSG00000137274.8chr6+3150256315037931406193140743315272131532800.055000.000880.09004includedHepG2KHSRP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for BPHL is not avaliable on ENCORE database.