ZNF480

General Information

Gene Name       : ZNF480
Gene ID             : ENSG00000198464.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNF480)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNF480ENSG00000198464.1312.3310.2711.30ENCSR000AEF
HepG2ZNF480ENSG00000198464.137.498.988.23ENCSR985KAT
K562ZNF480ENSG00000198464.1322.1815.5618.87ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF480 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZNF480 RNA is bound by 5 proteins.  







eCLIP assay for ZNF480 is not avaliable on ENCORE database.





5 proteins are bound to ZNF480 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr195282482852824962+3'-UTR,CDS,intron-Proximal3.228555.12958K562UCHL5
chr195280364552803704+5'-UTR,CDS,intron-Proximal4.164225.07098K562DDX3X
chr195280043452800500+5'-UTR,intron-Proximal3.873723.66700HepG2SRSF1
chr195281742352817533+CDS,intron-Distal,intron-Proximal4.398434.77252K562ZNF622
chr195280333752803426+intron-Distal3.260513.73413HepG2RBFOX2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZNF480 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF480 is not available on ENCORE database.

  • 106 RBPs can affect the levels of ZNF480.  








The Knockdown/knockout RNA-Seq assay for ZNF480 is not available on ENCORE database.





106 RBPs can affect the gene expression of ZNF480 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF480ENSG00000198464.9346.21350260.678900.409302.513401.92900HepG2ACO1
ZNF480ENSG00000198464.9585.18740313.224400.901606.986406.18360HepG2AKAP1
ZNF480ENSG00000198464.9373.98780261.968200.513503.655902.78700HepG2AKAP8L
ZNF480ENSG00000198464.9457.23480604.91480-0.403802.007201.49030HepG2BOP1
ZNF480ENSG00000198464.9551.83030376.190700.552702.615701.86530HepG2CALR
ZNF480ENSG00000198464.9359.30800246.230500.545102.814302.03450HepG2CIRBP
ZNF480ENSG00000198464.9314.85980209.313800.588902.617601.31570HepG2CSTF2T
ZNF480ENSG00000198464.9351.88870220.668700.673104.505503.32900HepG2DDX24
ZNF480ENSG00000198464.9361.56210249.419100.535603.584502.83060HepG2DKC1
ZNF480ENSG00000198464.9220.25420290.84410-0.401102.240301.64100HepG2DNAJC2
ZNF480ENSG00000198464.9400.09610224.244700.835205.783604.51170HepG2EIF3D
ZNF480ENSG00000198464.9322.19830212.927800.597503.632702.41520HepG2EIF3G
ZNF480ENSG00000198464.9378.27630273.851800.465902.184201.61310HepG2EIF4A3
ZNF480ENSG00000198464.9576.86600451.402200.353702.567301.98460HepG2ETF1
ZNF480ENSG00000198464.9398.31930272.056700.549903.025302.09300HepG2G3BP2
ZNF480ENSG00000198464.9313.53160199.661000.651003.323502.33210HepG2GEMIN5
ZNF480ENSG00000198464.9456.72490629.59830-0.463101.861001.32900HepG2GPKOW
ZNF480ENSG00000198464.9292.81090600.83270-1.037009.195608.12210HepG2HNRNPLL
ZNF480ENSG00000198464.9208.29450327.30750-0.652004.931204.14160HepG2HNRNPU
ZNF480ENSG00000198464.9475.42200301.126900.658703.864202.40730HepG2HSPD1
ZNF480ENSG00000198464.9470.84640244.457100.945602.354301.45380HepG2IGF2BP3
ZNF480ENSG00000198464.9484.92120276.353800.811106.119805.15220HepG2MAGOH
ZNF480ENSG00000198464.9435.62290277.908200.648403.686902.96910HepG2MATR3
ZNF480ENSG00000198464.9512.80400344.891900.572204.459803.72390HepG2PUF60
ZNF480ENSG00000198464.9480.63180366.131300.392503.243002.61220HepG2PUM1
ZNF480ENSG00000198464.9641.69540321.258000.998106.199405.16900HepG2RAVER1
ZNF480ENSG00000198464.9978.07400377.286501.3742032.4966031.10800HepG2RBM22
ZNF480ENSG00000198464.9450.33440280.423500.683305.784905.04820HepG2NELFE
ZNF480ENSG00000198464.9344.24420261.164100.398402.072701.52930HepG2RECQL
ZNF480ENSG00000198464.9367.09110218.200700.750405.460904.62950HepG2RPS19
ZNF480ENSG00000198464.9299.53490184.986800.695203.298702.42460HepG2RPS3A
ZNF480ENSG00000198464.9338.90240223.293200.601803.259702.41540HepG2RRP9
ZNF480ENSG00000198464.9323.67160218.997200.563502.985302.00660HepG2SERBP1
ZNF480ENSG00000198464.9692.12020492.810900.489902.571801.92150HepG2SF3A3
ZNF480ENSG00000198464.9434.50820339.894100.354202.454501.84320HepG2SMN1
ZNF480ENSG00000198464.9503.18330273.826800.877709.753308.98820HepG2SRSF1
ZNF480ENSG00000198464.9499.32550340.546500.552005.184304.36900HepG2SRSF5
ZNF480ENSG00000198464.9319.14130443.19360-0.473703.659102.87550HepG2SRSF7
ZNF480ENSG00000198464.9644.46790369.972400.8006011.6204010.71170HepG2SSB
ZNF480ENSG00000198464.9240.80100320.88680-0.414202.448701.91110HepG2TRIM56
ZNF480ENSG00000198464.9740.06810350.735301.077208.467207.36550HepG2U2AF1
ZNF480ENSG00000198464.9577.66560421.954000.453003.794003.10990HepG2UTP3
ZNF480ENSG00000198464.9588.93360353.222200.737404.696503.33180HepG2XRCC6
ZNF480ENSG00000198464.9615.21950480.669800.356003.191802.61790HepG2ZNF622
ZNF480ENSG00000198464.9837.38740386.218401.1164016.9148014.09320K562AARS
ZNF480ENSG00000198464.9198.07910403.72640-1.027304.814904.10090K562AGGF1
ZNF480ENSG00000198464.9248.31850443.54940-0.836903.838302.64040K562AKAP8
ZNF480ENSG00000198464.9231.55140420.07480-0.859303.616002.86570K562AKAP8L
ZNF480ENSG00000198464.91676.999301105.791900.600702.510001.33300K562APOBEC3C
ZNF480ENSG00000198464.9269.21970440.72000-0.711102.568601.69070K562ATP5C1
ZNF480ENSG00000198464.9667.23520904.02860-0.438203.100102.17540K562BOP1
ZNF480ENSG00000198464.9865.276001160.67710-0.423702.876001.40640K562CKAP4
ZNF480ENSG00000198464.9561.37590961.24530-0.7759010.855509.28660K562CPSF6
ZNF480ENSG00000198464.9282.15580404.22490-0.518703.085501.96340K562CSTF2
ZNF480ENSG00000198464.9550.15890709.75770-0.367503.182201.87630K562DDX21
ZNF480ENSG00000198464.9125.42140185.33410-0.563302.375401.41190K562DDX3X
ZNF480ENSG00000198464.91923.847701101.660000.804207.661606.65050K562DDX47
ZNF480ENSG00000198464.9441.82280294.318600.586002.813801.45690K562DNAJC21
ZNF480ENSG00000198464.9641.82280278.399801.204908.861407.02650K562EIF3A
ZNF480ENSG00000198464.9711.71730474.992800.583305.933604.78170K562EIF3G
ZNF480ENSG00000198464.9472.77690193.616101.2879015.6284013.56790K562EIF4A3
ZNF480ENSG00000198464.9407.52910541.43780-0.409902.709401.45890K562EXOSC5
ZNF480ENSG00000198464.9696.611301230.81490-0.821206.770805.39670K562FIP1L1
ZNF480ENSG00000198464.9745.43900978.03750-0.391802.872402.00100K562FMR1
ZNF480ENSG00000198464.9890.15680201.350402.1443063.3669060.73660K562FXR1
ZNF480ENSG00000198464.9218.84480368.21260-0.750605.705303.54950K562G3BP1
ZNF480ENSG00000198464.9693.57970917.75550-0.404003.099502.26160K562GPKOW
ZNF480ENSG00000198464.9948.218101304.52080-0.460202.091701.42830K562GRSF1
ZNF480ENSG00000198464.9245.39370468.13770-0.931804.961102.31490K562HLTF
ZNF480ENSG00000198464.9195.05240489.81510-1.328407.842705.39450K562HNRNPA2B1
ZNF480ENSG00000198464.9966.59700422.748901.1930021.1487019.57680K562HNRNPC
ZNF480ENSG00000198464.9418.59570578.05320-0.465603.840202.78610K562HNRNPU
ZNF480ENSG00000198464.91163.920201668.84230-0.519903.353502.48010K562HSPD1
ZNF480ENSG00000198464.9170.40360385.12930-1.176409.289206.99860K562IGF2BP2
ZNF480ENSG00000198464.9250.71510391.73160-0.643804.746803.09990K562IGF2BP3
ZNF480ENSG00000198464.9230.34310445.87760-0.952903.606102.64830K562KIF1C
ZNF480ENSG00000198464.9618.52700404.762800.611704.028303.00870K562MAGOH
ZNF480ENSG00000198464.9190.57400426.75510-1.163104.402002.95440K562MAK16
ZNF480ENSG00000198464.9562.58270403.942800.477803.652502.57890K562MATR3
ZNF480ENSG00000198464.9308.25780499.48530-0.696302.898601.96260K562MBNL1
ZNF480ENSG00000198464.9601.24100895.83060-0.575305.731604.44310K562METAP2
ZNF480ENSG00000198464.9517.86440746.54920-0.527705.275204.18420K562MTPAP
ZNF480ENSG00000198464.9155.72980350.09660-1.168704.863403.58610K562NAA15
ZNF480ENSG00000198464.9604.77460829.54530-0.455906.018104.97670K562NSUN2
ZNF480ENSG00000198464.9171.62600428.50480-1.320007.193705.34110K562PABPN1
ZNF480ENSG00000198464.9245.16020395.65120-0.690505.528903.56050K562PCBP1
ZNF480ENSG00000198464.91020.03630688.709000.566604.597603.52740K562PCBP3
ZNF480ENSG00000198464.9895.96270528.286900.7620010.426608.91690K562POLR2G
ZNF480ENSG00000198464.9836.844001397.09640-0.739405.225404.04050K562PPIG
ZNF480ENSG00000198464.9214.52180509.49880-1.248006.616004.01540K562PPP1R8
ZNF480ENSG00000198464.9727.49370473.512900.619405.247104.21430K562PRPF8
ZNF480ENSG00000198464.9596.91540393.251900.602005.707004.78250K562PTBP1
ZNF480ENSG00000198464.93022.409001367.285901.144306.402005.16210K562PUF60
ZNF480ENSG00000198464.9133.42400416.74840-1.643208.071407.19080K562PUS1
ZNF480ENSG00000198464.9187.02390405.93460-1.118005.345104.54570K562RBM15
ZNF480ENSG00000198464.9139.46610241.54600-0.792404.413302.67560K562RBM25
ZNF480ENSG00000198464.9480.11900345.719500.473703.104402.04560K562RCC2
ZNF480ENSG00000198464.9741.87120396.821300.9026010.486108.30800K562NELFE
ZNF480ENSG00000198464.9657.41420482.401700.446502.705901.89940K562RPS19
ZNF480ENSG00000198464.9428.59830193.938401.143903.164802.08410K562RPS3
ZNF480ENSG00000198464.9778.71110470.642200.726408.031206.22590K562SAFB
ZNF480ENSG00000198464.9933.23470486.622500.9393012.552309.76800K562SDAD1
ZNF480ENSG00000198464.9153.92510391.91040-1.348305.612403.70570K562SF1
ZNF480ENSG00000198464.9368.22960264.775400.475703.075402.17240K562SF3B4
ZNF480ENSG00000198464.9255.26140511.79690-1.003606.073503.10570K562SMNDC1
ZNF480ENSG00000198464.9164.21860450.03560-1.454408.036505.54910K562SNRNP200
ZNF480ENSG00000198464.9245.20230364.09000-0.570303.452002.25810K562SRSF5
ZNF480ENSG00000198464.9480.95610633.43770-0.397303.526802.19350K562SRSF7
ZNF480ENSG00000198464.9845.92750601.346000.492205.066402.95480K562SRSF9
ZNF480ENSG00000198464.9254.49170538.34670-1.080905.384203.18690K562SUPT6H
ZNF480ENSG00000198464.91448.77560529.852901.4511021.5947019.42030K562SYNCRIP
ZNF480ENSG00000198464.9531.01980390.170300.444602.551601.87030K562TARDBP
ZNF480ENSG00000198464.9264.76850364.56500-0.461402.114601.30780K562TIAL1
ZNF480ENSG00000198464.9236.99110369.31980-0.640003.955202.61430K562TRA2A
ZNF480ENSG00000198464.9233.93430387.20530-0.727005.068003.69400K562TRIM56
ZNF480ENSG00000198464.9978.052801440.26700-0.558403.646002.00150K562TRIP6
ZNF480ENSG00000198464.9392.44350254.887600.622504.765103.71470K562U2AF2
ZNF480ENSG00000198464.9510.04970879.57950-0.7862010.497209.21300K562UPF1
ZNF480ENSG00000198464.9202.42700422.38820-1.061203.746802.16810K562UTP18
ZNF480ENSG00000198464.91052.94170782.599500.428005.569804.41290K562WDR43
ZNF480ENSG00000198464.91059.05780495.068301.097007.651204.68590K562XRCC6
ZNF480ENSG00000198464.9293.70840529.65750-0.850703.470101.62680K562YTHDC2
ZNF480ENSG00000198464.9826.79130563.467800.553105.760103.20020K562ZNF800
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF480 is not available on ENCORE database.





11 RBPs can affect the splicing of ZNF480 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZNF480ENSG00000198464.9chr19+528174055281753252803646528037375281908652819215-0.272000.000000.00000excludedK562SRSF1
SEZNF480ENSG00000198464.9chr19+528174055281753252803661528037375281908652819215-0.158000.001540.02977excludedK562SF3B4
SEZNF480ENSG00000198464.9chr19+528174055281753252803499528037375281908652819215-0.106000.001230.08923excludedK562XRCC6
SEZNF480ENSG00000198464.9chr19+528010425280120152800429528004765280364652803737-0.233000.000010.00053excludedK562FXR1
SEZNF480ENSG00000198464.9chr19+5280104252801201528004315280047652803646528037370.280000.000030.01182includedK562HNRNPA1
SEZNF480ENSG00000198464.9chr19+528174055281753252803646528037375281908652819215-0.161000.000050.00146excludedK562PUS1
SEZNF480ENSG00000198464.9chr19+5281740552817532528036465280373752819086528192150.195000.000950.05772includedHepG2FTO
SEZNF480ENSG00000198464.9chr19+5280104252801201528004315280047652803646528037370.262000.000000.00687includedK562ZRANB2
SEZNF480ENSG00000198464.9chr19+5280104252801201528004315280047652803646528037370.220000.002220.03802includedK562U2AF2
SEZNF480ENSG00000198464.9chr19+528010425280120152800431528004765280364652803737-0.153000.000020.00209excludedK562HNRNPK
SEZNF480ENSG00000198464.9chr19+528174055281753252803646528037375281908652819215-0.176000.000000.00008excludedK562HNRNPC
MXEZNF480ENSG00000198464.9chr19+52803646528037375281740552817532528004315280047652819086528192150.216000.002840.043331includedK562SRSF1
MXEZNF480ENSG00000198464.9chr19+52803646528038405281740552817532528004315280047652819086528192150.167000.002060.070851includedK562FXR1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZNF480 is not avaliable on ENCORE database.