ZDHHC9

General Information

Gene Name       : ZDHHC9
Gene ID             : ENSG00000188706.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZDHHC9)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZDHHC9ENSG00000188706.125.325.545.43ENCSR000AEF
HepG2ZDHHC9ENSG00000188706.1218.6224.7321.68ENCSR985KAT
K562ZDHHC9ENSG00000188706.1212.8315.0513.94ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZDHHC9 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZDHHC9 RNA is bound by 18 proteins.  







eCLIP assay for ZDHHC9 is not avaliable on ENCORE database.





18 proteins are bound to ZDHHC9 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX128939481128939529-3'-UTR,intron-Distal4.036813.65261HepG2TIA1
chrX128940006128940067-3'-UTR,intron-Distal6.5954422.61753HepG2UPF1
chrX128940184128940232-3'-UTR,intron-Distal4.249249.01045HepG2AKAP1
chrX128939921128939983-3'-UTR,intron-Distal3.190196.87018HepG2UPF1
chrX128939831128939896-3'-UTR,intron-Distal4.8474613.07630HepG2UPF1
chrX128939680128939779-3'-UTR,intron-Distal3.9017013.01471HepG2AKAP1
chrX128940067128940126-3'-UTR,intron-Distal6.4346321.10731HepG2UPF1
chrX128939620128939672-3'-UTR,intron-Distal4.6186717.77343HepG2UPF1
chrX128939621128939680-3'-UTR,intron-Distal4.0538214.75826HepG2AKAP1
chrX128939252128939281-3'-UTR,intron-Distal,intron-Proximal3.302723.72765HepG2UPF1
chrX128939655128939690-3'-UTR,intron-Distal4.8784617.94406K562UPF1
chrX128939188128939283-3'-UTR,intron-Distal,intron-Proximal3.679366.74707HepG2IGF2BP1
chrX128939425128939441-3'-UTR,intron-Distal4.087613.11728K562FAM120A
chrX128940182128940233-3'-UTR,intron-Distal4.2791210.12876K562UPF1
chrX128939777128939831-3'-UTR,intron-Distal5.6965212.58146HepG2UPF1
chrX128940177128940224-3'-UTR,intron-Distal3.307685.23161K562TIA1
chrX128939816128939852-3'-UTR,intron-Distal4.478545.45170HepG2AKAP1
chrX128940126128940163-3'-UTR,intron-Distal5.042777.94456HepG2UPF1
chrX128939595128939648-3'-UTR,intron-Distal4.8403722.61954K562UPF1
chrX128940015128940100-3'-UTR,intron-Distal4.6754413.03187HepG2AKAP1
chrX128939563128939620-3'-UTR,intron-Distal6.3732321.73270HepG2UPF1
chrX128937708128937813-3'-UTR,intron-Distal3.749457.77577HepG2PCBP2
chrX128940119128940174-3'-UTR,intron-Distal3.746813.43253K562YBX3
chrX128940101128940149-3'-UTR,intron-Distal3.198703.61668HepG2IGF2BP1
chrX128939185128939282-3'-UTR,intron-Distal,intron-Proximal4.684426.33394K562IGF2BP2
chrX128939081128939134-3'-UTR,intron-Distal3.863354.39727HepG2LIN28B
chrX128940283128940303-3'-UTR,intron-Distal3.967363.08342HepG2AKAP1
chrX128939649128939774-3'-UTR,intron-Distal3.0028215.10571HepG2PCBP2
chrX128939815128939875-3'-UTR,intron-Distal3.919188.62096K562UPF1
chrX128938999128939053-3'-UTR,intron-Distal3.166533.40766K562PUM2
chrX128939486128939533-3'-UTR,intron-Distal5.2874714.77591K562UPF1
chrX128939942128939965-3'-UTR,intron-Distal3.452553.20150HepG2AKAP1
chrX128939098128939176-3'-UTR,intron-Distal3.298576.27237HepG2IGF2BP1
chrX128939486128939531-3'-UTR,intron-Distal3.013745.98838HepG2AKAP1
chrX128939481128939525-3'-UTR,intron-Distal3.448226.33560K562TIA1
chrX128940253128940312-3'-UTR,intron-Distal4.9316712.67045K562UPF1
chrX128939484128939526-3'-UTR,intron-Distal4.614645.38606K562FAM120A
chrX128940185128940236-3'-UTR,intron-Distal5.3430811.00768HepG2UPF1
chrX128939690128939777-3'-UTR,intron-Distal5.2428640.62989K562UPF1
chrX128940185128940233-3'-UTR,intron-Distal4.119093.61881HepG2TIAL1
chrX128939592128939617-3'-UTR,intron-Distal4.3548213.28429HepG2AKAP1
chrX128938976128939011-3'-UTR,intron-Distal4.282347.15603K562UPF1
chrX128939707128939777-3'-UTR,intron-Distal4.5000316.62201HepG2UPF1
chrX128939486128939532-3'-UTR,intron-Distal4.747847.37733HepG2TIAL1
chrX128977674128977758-5'-UTR,intron-Distal5.806118.00105K562DDX3X
chrX128977416128977490-5'-UTR,intron-Distal,intron-Proximal5.458407.24749HepG2EFTUD2
chrX128976050128976057-5'-UTR,intron-Distal,intron-Proximal5.312795.29846HepG2DDX3X
chrX128977234128977304-5'-UTR,intron-Distal,intron-Proximal3.714254.84938K562DDX3X
chrX128977758128977843-5'-UTR,intron-Distal4.145155.63105K562DDX3X
chrX128977235128977302-5'-UTR,intron-Distal5.8163032.71308HepG2DDX3X
chrX128977671128977754-5'-UTR,intron-Distal5.8902068.48370HepG2DDX3X
chrX128975931128976058-5'-UTR,intron-Distal,intron-Proximal3.139406.60215K562DDX3X
chrX128977757128977805-5'-UTR,intron-Distal6.4423628.10391HepG2DDX3X
chrX128975986128976033-5'-UTR,intron-Distal,intron-Proximal3.105274.61051HepG2DDX3X
chrX128977832128977838-5'-UTR,intron-Distal4.190234.84319HepG2DDX3X
chrX128940438128940462-CDS,intron-Distal3.452183.03966HepG2SND1
chrX128948719128948803-CDS,intron-Distal,intron-Proximal4.167365.63763K562AQR
chrX128945373128945431-CDS,intron-Distal,intron-Proximal4.292208.09084HepG2PPIG
chrX128948742128948826-CDS,intron-Distal,intron-Proximal3.048404.35358HepG2AQR
chrX128945379128945486-CDS,intron-Distal,intron-Proximal3.346076.02862HepG2GRWD1
chrX128962971128963059-CDS,intron-Distal4.086493.24875K562SND1
chrX128957596128957663-CDS,intron-Distal,intron-Proximal3.463793.96535HepG2AQR
chrX128949988128950278-intron-Distal3.675745.09850K562ILF3
chrX128957606128957655-intron-Distal,intron-Proximal4.234823.11721K562AQR
chrX128957506128957606-intron-Distal,intron-Proximal3.370154.41130K562AQR
chrX128957500128957578-intron-Distal,intron-Proximal4.393064.75425K562EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZDHHC9 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZDHHC9 is not available on ENCORE database.

  • 110 RBPs can affect the levels of ZDHHC9.  








The Knockdown/knockout RNA-Seq assay for ZDHHC9 is not available on ENCORE database.





110 RBPs can affect the gene expression of ZDHHC9 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZDHHC9ENSG00000188706.81055.826201401.10380-0.408203.708602.47530HepG2AATF
ZDHHC9ENSG00000188706.81877.397402958.39390-0.656108.149406.65060HepG2ABCF1
ZDHHC9ENSG00000188706.81715.726002013.07240-0.230602.906902.28630HepG2ACO1
ZDHHC9ENSG00000188706.81438.644903635.15790-1.3373025.3063023.88240HepG2AKAP1
ZDHHC9ENSG00000188706.82223.595903007.70990-0.435803.998203.06090HepG2ASCC1
ZDHHC9ENSG00000188706.82758.437602207.389600.321404.862903.99390HepG2AUH
ZDHHC9ENSG00000188706.81730.568601103.496500.649106.252304.96300HepG2BCLAF1
ZDHHC9ENSG00000188706.83750.788901717.952201.1264028.2254026.64760HepG2BOP1
ZDHHC9ENSG00000188706.82943.402802216.034200.409404.482402.93470HepG2BUD13
ZDHHC9ENSG00000188706.82606.683502103.961400.309003.371302.53040HepG2CALR
ZDHHC9ENSG00000188706.81708.264202779.12890-0.702106.707605.17290HepG2CCAR1
ZDHHC9ENSG00000188706.81405.379402012.59790-0.5181012.7908011.57160HepG2CKAP4
ZDHHC9ENSG00000188706.81340.452202192.04410-0.709604.668203.67110HepG2CNOT7
ZDHHC9ENSG00000188706.82417.883201577.158500.616308.056706.93470HepG2CPSF6
ZDHHC9ENSG00000188706.83237.636402435.721100.410504.645303.24080HepG2CPSF7
ZDHHC9ENSG00000188706.8595.41860784.40640-0.397702.907101.80680HepG2CSTF2
ZDHHC9ENSG00000188706.82358.362902045.163800.205502.237401.64850HepG2CELF1
ZDHHC9ENSG00000188706.82684.528802198.873300.287805.427804.43660HepG2DAZAP1
ZDHHC9ENSG00000188706.81407.668201861.78650-0.403405.739104.59700HepG2DDX19B
ZDHHC9ENSG00000188706.8859.979201168.31920-0.442103.078601.72570HepG2DDX27
ZDHHC9ENSG00000188706.84524.020603476.067600.380003.214601.82400HepG2DDX47
ZDHHC9ENSG00000188706.81160.578001444.63350-0.315902.706101.36670HepG2DDX52
ZDHHC9ENSG00000188706.83229.871002488.220200.376303.524402.38910HepG2DDX5
ZDHHC9ENSG00000188706.82160.594601549.212900.479805.628304.26110HepG2DHX30
ZDHHC9ENSG00000188706.81318.032001925.95520-0.5472011.139709.96900HepG2DKC1
ZDHHC9ENSG00000188706.82052.343601592.224400.366104.569003.76720HepG2DNAJC2
ZDHHC9ENSG00000188706.81128.702901723.55630-0.610706.652505.28430HepG2EEF2
ZDHHC9ENSG00000188706.81901.681701423.527800.417702.658701.57660HepG2AGO1
ZDHHC9ENSG00000188706.83587.907502875.446300.319302.355001.80530HepG2EIF2S1
ZDHHC9ENSG00000188706.81134.733001459.85770-0.363503.571402.36410HepG2EIF3G
ZDHHC9ENSG00000188706.81363.327801967.09850-0.528907.089005.75740HepG2EWSR1
ZDHHC9ENSG00000188706.81879.469203206.55440-0.7707011.106509.81150HepG2FXR1
ZDHHC9ENSG00000188706.82262.099702974.24790-0.394903.091402.38990HepG2G3BP1
ZDHHC9ENSG00000188706.82488.828003157.93940-0.343502.788001.89400HepG2G3BP2
ZDHHC9ENSG00000188706.8942.476301245.70940-0.402403.079902.13100HepG2GEMIN5
ZDHHC9ENSG00000188706.82313.052501921.885400.267203.543902.44760HepG2HDGF
ZDHHC9ENSG00000188706.81104.821201621.57040-0.553606.075505.16970HepG2HNRNPA1
ZDHHC9ENSG00000188706.82182.856801705.959900.355505.243804.29590HepG2HNRNPF
ZDHHC9ENSG00000188706.82107.877503012.39940-0.515106.138105.12760HepG2HNRNPK
ZDHHC9ENSG00000188706.83534.794101706.125101.0508021.1112019.62890HepG2HNRNPLL
ZDHHC9ENSG00000188706.81647.951702060.66680-0.322403.244302.22280HepG2HNRNPM
ZDHHC9ENSG00000188706.81369.454601791.84170-0.387803.675602.98680HepG2HNRNPU
ZDHHC9ENSG00000188706.82172.161201679.875900.370704.015703.15800HepG2IGF2BP1
ZDHHC9ENSG00000188706.81735.405102837.52850-0.709402.555901.61340HepG2IGF2BP3
ZDHHC9ENSG00000188706.82347.717001830.294100.359103.656102.82330HepG2ILF2
ZDHHC9ENSG00000188706.82258.847003207.67640-0.505905.005004.13150HepG2MAGOH
ZDHHC9ENSG00000188706.82138.472803225.53620-0.593005.992105.08920HepG2MATR3
ZDHHC9ENSG00000188706.83040.686102417.067300.331003.162502.30040HepG2MSI2
ZDHHC9ENSG00000188706.82325.472101740.116900.418202.323301.44090HepG2MTPAP
ZDHHC9ENSG00000188706.82580.527702029.748000.346303.213401.90140HepG2NAA15
ZDHHC9ENSG00000188706.82382.797303301.43980-0.470404.349703.56280HepG2NCBP2
ZDHHC9ENSG00000188706.81998.652801512.836400.401703.600202.74690HepG2NSUN2
ZDHHC9ENSG00000188706.82920.759102003.883500.543402.969802.04980HepG2PABPC1
ZDHHC9ENSG00000188706.81802.775903080.52180-0.7730026.4943024.93930HepG2PCBP1
ZDHHC9ENSG00000188706.81993.513301598.166500.318803.896303.03700HepG2PPIL4
ZDHHC9ENSG00000188706.81256.793901942.64970-0.628304.336602.83010HepG2PRPF6
ZDHHC9ENSG00000188706.81954.608003134.50470-0.6814020.7156019.48570HepG2PTBP1
ZDHHC9ENSG00000188706.81320.848002209.59870-0.7423026.0153024.57230HepG2PUM1
ZDHHC9ENSG00000188706.81852.183402207.94850-0.253502.204201.60310HepG2PUM2
ZDHHC9ENSG00000188706.82601.940103394.83420-0.383805.802604.94560HepG2QKI
ZDHHC9ENSG00000188706.81766.526602118.26300-0.262002.912802.38470HepG2RBM22
ZDHHC9ENSG00000188706.8785.406901698.90910-1.1131019.1198016.54850HepG2RBM27
ZDHHC9ENSG00000188706.81366.030103488.43720-1.3526072.3477070.51510HepG2NELFE
ZDHHC9ENSG00000188706.81696.400303248.94270-0.9375038.0084036.23490HepG2RECQL
ZDHHC9ENSG00000188706.81152.849201566.90360-0.442703.620502.70870HepG2RPS2
ZDHHC9ENSG00000188706.81715.856201366.341000.328502.488601.59540HepG2SERBP1
ZDHHC9ENSG00000188706.81841.477502870.75480-0.640605.332204.37860HepG2SF3A3
ZDHHC9ENSG00000188706.83010.367601688.702800.8339015.1746013.66510HepG2SF3B1
ZDHHC9ENSG00000188706.81164.813603263.49820-1.4863084.6725082.31110HepG2SF3B4
ZDHHC9ENSG00000188706.82596.882201995.896200.379608.704407.56930HepG2SLBP
ZDHHC9ENSG00000188706.81279.447601860.74570-0.540406.250205.34380HepG2SMN1
ZDHHC9ENSG00000188706.82799.240501359.538501.041803.810302.21190HepG2SNRNP200
ZDHHC9ENSG00000188706.82739.823301878.986600.544003.525502.63830HepG2SNRNP70
ZDHHC9ENSG00000188706.83435.639802392.505100.5220015.2697014.34220HepG2SRFBP1
ZDHHC9ENSG00000188706.81171.679203406.35530-1.5397098.2151096.35350HepG2SRSF1
ZDHHC9ENSG00000188706.82080.535101676.075400.311804.037203.22110HepG2SRSF7
ZDHHC9ENSG00000188706.81544.139602077.26970-0.427907.965407.18150HepG2SSB
ZDHHC9ENSG00000188706.83105.704501994.726800.638604.790403.20580HepG2STAU1
ZDHHC9ENSG00000188706.81268.148002337.25590-0.8821028.6846027.03360HepG2SUCLG1
ZDHHC9ENSG00000188706.82701.623502016.606600.421804.629403.43000HepG2SUPT6H
ZDHHC9ENSG00000188706.81800.374503061.68080-0.7660020.8223019.48140HepG2TAF15
ZDHHC9ENSG00000188706.82928.545001663.054200.8162014.1983012.76120HepG2TARDBP
ZDHHC9ENSG00000188706.81239.60260833.141500.573104.478103.25610HepG2TFIP11
ZDHHC9ENSG00000188706.81062.584701740.82600-0.712209.570608.73830HepG2TIAL1
ZDHHC9ENSG00000188706.82342.824001756.691600.415303.169602.57540HepG2TRIM56
ZDHHC9ENSG00000188706.81539.573002555.00570-0.7308011.209809.92270HepG2U2AF1
ZDHHC9ENSG00000188706.83126.443102545.919900.296205.098904.19600HepG2UPF1
ZDHHC9ENSG00000188706.81660.567302457.98670-0.5658013.8886012.70250HepG2UTP3
ZDHHC9ENSG00000188706.81285.972101753.79750-0.447602.558201.35170HepG2XRCC5
ZDHHC9ENSG00000188706.81433.059001961.20300-0.452602.710601.66620HepG2XRCC6
ZDHHC9ENSG00000188706.8892.199101223.64110-0.455703.699602.86980HepG2XRN2
ZDHHC9ENSG00000188706.84068.838802800.025500.5391020.6617019.50850HepG2ZNF622
ZDHHC9ENSG00000188706.81911.448001464.123000.384505.988105.20400K562AGGF1
ZDHHC9ENSG00000188706.81992.565401608.818000.308502.549201.61240K562AKAP8
ZDHHC9ENSG00000188706.81900.339801523.478500.318802.659402.01810K562AKAP8L
ZDHHC9ENSG00000188706.8945.652901266.46770-0.421403.897402.38820K562APOBEC3C
ZDHHC9ENSG00000188706.81498.662701059.665300.500003.102702.17740K562BOP1
ZDHHC9ENSG00000188706.81826.175301336.454200.450303.502401.84690K562CKAP4
ZDHHC9ENSG00000188706.81346.766401126.727900.257301.991901.31800K562CPSF6
ZDHHC9ENSG00000188706.8899.34040724.615700.311602.287601.34370K562DDX3X
ZDHHC9ENSG00000188706.82044.678601639.421200.318603.985102.90830K562DKC1
ZDHHC9ENSG00000188706.8599.95530757.05510-0.335502.156601.42760K562EIF4A3
ZDHHC9ENSG00000188706.8837.62540681.779400.296902.403001.34880K562EIF4B
ZDHHC9ENSG00000188706.8850.56350660.838700.364002.953501.60980K562EWSR1
ZDHHC9ENSG00000188706.8645.44880787.30730-0.286602.112201.57070K562FXR1
ZDHHC9ENSG00000188706.81480.97060918.555000.689005.799404.38980K562KRR1
ZDHHC9ENSG00000188706.81065.92300749.788200.507404.889502.96460K562LARP7
ZDHHC9ENSG00000188706.81965.077701547.671300.344402.775001.69730K562MAK16
ZDHHC9ENSG00000188706.81702.340501269.546900.423102.617701.76300K562NAA15
ZDHHC9ENSG00000188706.81277.130901059.227600.269803.284302.47700K562NSUN2
ZDHHC9ENSG00000188706.8987.102001297.67700-0.394702.762701.93250K562PCBP3
ZDHHC9ENSG00000188706.8662.70910995.30410-0.586804.075703.09970K562POLR2G
ZDHHC9ENSG00000188706.8410.32150590.32230-0.524703.575802.72170K562PRPF8
ZDHHC9ENSG00000188706.82591.841901510.928800.778408.871607.94710K562PUS1
ZDHHC9ENSG00000188706.81883.451001472.126000.355404.242003.52380K562RBM15
ZDHHC9ENSG00000188706.8584.40560743.42890-0.347202.262201.50680K562RBM22
ZDHHC9ENSG00000188706.81270.944901045.122200.282102.630301.83490K562SF3A3
ZDHHC9ENSG00000188706.81773.366001046.643300.760603.223701.86020K562SNRNP200
ZDHHC9ENSG00000188706.81116.72160709.370300.654607.565705.82430K562TRIM56
ZDHHC9ENSG00000188706.8802.45340647.039500.310502.200301.48430K562U2AF2
ZDHHC9ENSG00000188706.81313.853001123.118000.226202.012201.39340K562UPF1
ZDHHC9ENSG00000188706.81169.81700961.022300.283502.084001.32630K562WDR3
ZDHHC9ENSG00000188706.81499.163001213.781500.304502.474701.66630K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZDHHC9 is not available on ENCORE database.





3 RBPs can affect the splicing of ZDHHC9 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZDHHC9ENSG00000188706.8chrX-1289772341289773021289757541289760561289776711289778600.233000.000410.06120includedK562DROSHA
SEZDHHC9ENSG00000188706.8chrX-1289772341289773021289757541289760561289776711289778600.213000.000150.01832includedK562HNRNPUL1
SEZDHHC9ENSG00000188706.8chrX-1289772341289773021289757541289760561289776711289778600.227000.000730.09688includedK562NPM1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZDHHC9 is not avaliable on ENCORE database.