VAMP2

General Information

Gene Name       : VAMP2
Gene ID             : ENSG00000220205.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: VAMP2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878VAMP2ENSG00000220205.825.7423.9724.85ENCSR000AEF
HepG2VAMP2ENSG00000220205.812.7614.9713.87ENCSR985KAT
K562VAMP2ENSG00000220205.820.2921.3920.84ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for VAMP2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • VAMP2 RNA is bound by 24 proteins.  







eCLIP assay for VAMP2 is not avaliable on ENCORE database.





24 proteins are bound to VAMP2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1780630368063112-3'-UTR,intron-Distal3.386213.34554K562NOLC1
chr1780649858065084-3'-UTR,CDS,intron-Distal3.116747.16368HepG2PPIG
chr1780630168063087-3'-UTR,intron-Distal4.799745.56405HepG2LSM11
chr1780637128063804-3'-UTR,intron-Distal,intron-Proximal3.864467.58507HepG2HNRNPK
chr1780625968062629-3'-UTR,intron-Distal3.772515.99425K562CSTF2T
chr1780632628063334-3'-UTR,intron-Distal3.7102610.59618K562CSTF2T
chr1780626748062737-3'-UTR,intron-Distal3.013796.36898K562LSM11
chr1780638038063839-3'-UTR,intron-Distal5.3507911.26688HepG2PCBP2
chr1780638518063933-3'-UTR,intron-Distal5.0338942.57787HepG2PCBP2
chr1780638428063911-3'-UTR,intron-Distal4.070799.19663HepG2PTBP1
chr1780641408064228-3'-UTR,CDS,intron-Distal3.175708.26020HepG2U2AF2
chr1780631328063183-3'-UTR,intron-Distal3.847894.57253K562HNRNPK
chr1780638398063928-3'-UTR,intron-Distal3.8855612.66324HepG2HNRNPK
chr1780626268062674-3'-UTR,intron-Distal3.372916.48120K562LSM11
chr1780638308063902-3'-UTR,intron-Distal3.9741016.06320K562ILF3
chr1780640118064073-3'-UTR,intron-Distal,intron-Proximal5.289848.61835K562TARDBP
chr1780647448064800-3'-UTR,CDS,intron-Distal,intron-Proximal3.568045.43815HepG2PRPF8
chr1780632908063335-3'-UTR,intron-Distal4.6454214.32541HepG2PCBP2
chr1780632818063326-3'-UTR,intron-Distal3.166083.72734HepG2CSTF2T
chr1780637298063803-3'-UTR,intron-Distal6.4720534.67995HepG2PCBP2
chr1780626298062663-3'-UTR,intron-Distal3.850096.22996K562CSTF2T
chr1780647418064843-3'-UTR,CDS,intron-Distal,intron-Proximal3.368078.56673HepG2PPIG
chr1780640108064075-3'-UTR,intron-Distal,intron-Proximal4.3415723.89204K562PUM2
chr1780628088062875-3'-UTR,intron-Distal3.709395.81997HepG2LSM11
chr1780636088063691-3'-UTR,intron-Distal,intron-Proximal5.9328321.87517K562PABPC4
chr1780626278062671-3'-UTR,intron-Distal4.605464.76744HepG2LSM11
chr1780637208063830-3'-UTR,intron-Distal,intron-Proximal4.2717013.09338K562ILF3
chr1780625898062654-3'-UTR,intron-Distal3.229453.64832HepG2ZC3H11A
chr1780634098063529-3'-UTR,intron-Distal3.228239.16858K562MATR3
chr1780626848062741-3'-UTR,intron-Distal3.917666.86123K562DDX6
chr1780632808063361-3'-UTR,intron-Distal3.248376.72401K562HNRNPK
chr1780638288063948-3'-UTR,intron-Distal4.3527836.89201K562PCBP1
chr1780626838062767-3'-UTR,intron-Distal3.282916.12973K562NOLC1
chr1780628108062868-3'-UTR,intron-Distal4.140293.51768K562NOLC1
chr1780626238062683-3'-UTR,intron-Distal4.680474.88343K562NOLC1
chr1780649648065081-3'-UTR,CDS,intron-Distal4.641404.35343K562SRSF1
chr1780646788064757-3'-UTR,intron-Distal,intron-Proximal3.070214.63797K562PRPF8
chr1780637308063827-3'-UTR,intron-Distal3.347105.70259K562HNRNPK
chr1780625878062626-3'-UTR,intron-Distal5.200877.82098K562LSM11
chr1780644208064547-3'-UTR,intron-Distal,intron-Proximal3.526334.25147HepG2LSM11
chr1780650678065134-3'-UTR,CDS,intron-Distal,intron-Proximal3.193595.61685K562AQR
chr1780626688062746-3'-UTR,intron-Distal3.016414.06631HepG2ZC3H11A
chr1780632888063332-3'-UTR,intron-Distal5.169357.41017K562PTBP1
chr1780638458063896-3'-UTR,intron-Distal3.0388910.97629K562PTBP1
chr1780637378063785-3'-UTR,intron-Distal4.315003.72005K562MATR3
chr1780626608062753-3'-UTR,intron-Distal4.814768.42748K562ZC3H11A
chr1780638418063940-3'-UTR,intron-Distal6.247097.30415HepG2PCBP1
chr1780647438064780-3'-UTR,intron-Distal,intron-Proximal3.4444411.02376K562AQR
chr1780647808064790-3'-UTR,CDS,intron-Distal,intron-Proximal3.207606.52662K562AQR
chr1780648328064881-CDS,intron-Distal,intron-Proximal3.532206.71722K562SF3B4
chr1780649488065062-CDS,intron-Distal3.2451814.57201K562ZNF622
chr1780649278064985-CDS,intron-Distal,intron-Proximal3.833359.58474HepG2PPIG
chr1780656918065761-intron-Distal,intron-Proximal4.137223.56713HepG2SF3B4
chr1780654548065516-intron-Distal,intron-Proximal4.422715.36494K562DROSHA
chr1780654358065494-intron-Distal,intron-Proximal3.518454.06013K562PRPF8
chr1780654498065517-intron-Distal,intron-Proximal4.024573.69252K562EFTUD2
chr1780654668065536-intron-Distal,intron-Proximal4.939587.20266K562BUD13
chr1780654758065532-intron-Distal,intron-Proximal4.538676.99120K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for VAMP2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for VAMP2 is not available on ENCORE database.

  • 119 RBPs can affect the levels of VAMP2.  








The Knockdown/knockout RNA-Seq assay for VAMP2 is not available on ENCORE database.





119 RBPs can affect the gene expression of VAMP2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
VAMP2ENSG00000220205.4342.52580588.94170-0.7819010.951109.90910HepG2ACO1
VAMP2ENSG00000220205.4255.51220730.88080-1.5162018.9323017.67030HepG2AKAP1
VAMP2ENSG00000220205.4853.99690604.734700.497803.591802.69980HepG2ASCC1
VAMP2ENSG00000220205.4767.43330525.869400.545204.687903.93420HepG2BOP1
VAMP2ENSG00000220205.4500.19720711.47500-0.508304.450103.50080HepG2CALR
VAMP2ENSG00000220205.4878.38930482.792300.8634010.489309.23590HepG2CPSF6
VAMP2ENSG00000220205.4628.65150782.00430-0.314902.287501.69340HepG2CELF1
VAMP2ENSG00000220205.4676.11680517.885000.384502.490901.84430HepG2DDX21
VAMP2ENSG00000220205.4806.38970507.053600.669205.542204.18300HepG2DHX30
VAMP2ENSG00000220205.4406.20590556.10520-0.453102.508601.62780HepG2EEF2
VAMP2ENSG00000220205.41021.66900578.149200.821308.923807.89740HepG2EIF2S1
VAMP2ENSG00000220205.41020.81250810.934100.332002.988402.36740HepG2ETF1
VAMP2ENSG00000220205.4441.55220575.55580-0.382402.494601.70080HepG2EWSR1
VAMP2ENSG00000220205.41539.04470483.587501.670103.384902.25580HepG2FTO
VAMP2ENSG00000220205.4896.82100533.370500.749608.723907.37110HepG2FUBP3
VAMP2ENSG00000220205.41202.50320598.009301.0077012.9721011.58740HepG2G3BP1
VAMP2ENSG00000220205.4684.01090530.726900.365902.331101.73350HepG2HNRNPA1
VAMP2ENSG00000220205.41062.83230590.373200.8481011.243009.92450HepG2HNRNPC
VAMP2ENSG00000220205.4783.84310520.513100.590507.049905.97420HepG2HNRNPF
VAMP2ENSG00000220205.41019.14400765.831900.412205.924504.96990HepG2HNRNPL
VAMP2ENSG00000220205.4935.13720522.318600.840108.149107.13230HepG2HNRNPLL
VAMP2ENSG00000220205.4885.41070586.467200.594203.978903.26290HepG2HNRNPU
VAMP2ENSG00000220205.4725.33390512.549500.500903.566502.75250HepG2IGF2BP1
VAMP2ENSG00000220205.4980.51470611.416100.681305.065103.67130HepG2KHSRP
VAMP2ENSG00000220205.41018.81210805.026300.339702.239601.50870HepG2MSI2
VAMP2ENSG00000220205.4918.40980532.604100.786005.357803.98310HepG2MTPAP
VAMP2ENSG00000220205.41060.38140663.778700.675706.151305.22340HepG2NCBP2
VAMP2ENSG00000220205.4717.66220463.104500.631903.493402.65110HepG2NSUN2
VAMP2ENSG00000220205.4916.08710591.103100.632005.465404.46050HepG2PABPC4
VAMP2ENSG00000220205.4764.31000603.074000.341702.895102.33830HepG2PTBP1
VAMP2ENSG00000220205.4468.98350795.85910-0.763008.543207.57180HepG2PUF60
VAMP2ENSG00000220205.4696.81820844.87020-0.277902.473101.90530HepG2PUM1
VAMP2ENSG00000220205.4684.41610844.23400-0.302802.010901.43300HepG2PUM2
VAMP2ENSG00000220205.4743.88920599.884400.310302.734902.12190HepG2PUS1
VAMP2ENSG00000220205.41226.15820653.153200.9086017.1068015.74460HepG2QKI
VAMP2ENSG00000220205.4460.37730677.78440-0.558005.850905.16750HepG2RBM22
VAMP2ENSG00000220205.4888.48380592.775100.583806.060505.09830HepG2RBM25
VAMP2ENSG00000220205.4687.85720942.74810-0.454802.481301.84320HepG2SF3A3
VAMP2ENSG00000220205.4499.19460627.88560-0.330902.391701.83660HepG2SF3B4
VAMP2ENSG00000220205.41059.94690575.263100.881606.889005.64950HepG2SNRNP70
VAMP2ENSG00000220205.4650.73600765.52130-0.234401.834401.40120HepG2SRFBP1
VAMP2ENSG00000220205.4516.43400655.37350-0.343702.700402.23210HepG2SRSF1
VAMP2ENSG00000220205.4938.76010556.242100.754906.173004.62790HepG2SRSF3
VAMP2ENSG00000220205.4637.73460785.83170-0.301302.277901.70310HepG2SRSF5
VAMP2ENSG00000220205.4948.17340511.412000.8906016.7967015.33600HepG2SRSF7
VAMP2ENSG00000220205.4582.93050893.67560-0.616409.037608.02340HepG2SUCLG1
VAMP2ENSG00000220205.4630.94390431.088200.549403.040502.33560HepG2SUPV3L1
VAMP2ENSG00000220205.4852.92450589.066600.533906.048405.27280HepG2TAF15
VAMP2ENSG00000220205.41040.56450508.986201.0316011.3424010.02410HepG2TARDBP
VAMP2ENSG00000220205.4802.22420541.281100.567505.933304.71750HepG2TIA1
VAMP2ENSG00000220205.4401.17030574.96580-0.519302.236501.71880HepG2TRIM56
VAMP2ENSG00000220205.41033.51400427.592901.273104.605603.31230HepG2U2AF2
VAMP2ENSG00000220205.4543.91570254.645301.0948011.6217010.08380HepG2UCHL5
VAMP2ENSG00000220205.4587.38350394.699500.573402.709301.71450HepG2UPF2
VAMP2ENSG00000220205.4501.42510807.19670-0.686909.583808.57830HepG2UTP3
VAMP2ENSG00000220205.4657.35430424.359500.631304.299703.40170HepG2XRN2
VAMP2ENSG00000220205.41272.77350690.259400.8827023.3980021.78870HepG2ZC3H8
VAMP2ENSG00000220205.43508.541002260.796300.6339019.6207018.22740K562AGGF1
VAMP2ENSG00000220205.43122.979502484.334600.330003.247602.16200K562AKAP8
VAMP2ENSG00000220205.43571.829202352.476100.602405.351304.42620K562AKAP8L
VAMP2ENSG00000220205.41687.329901200.977500.490403.286702.65760K562AQR
VAMP2ENSG00000220205.42955.296202468.342200.259703.099102.12900K562ATP5C1
VAMP2ENSG00000220205.41862.774901250.150900.575306.275204.95030K562BOP1
VAMP2ENSG00000220205.4984.59790744.389900.403402.998301.89390K562CCAR1
VAMP2ENSG00000220205.41372.180301088.041500.334603.151601.53300K562CEBPZ
VAMP2ENSG00000220205.42075.022801318.134300.654503.998302.67980K562CNOT7
VAMP2ENSG00000220205.41750.125301329.233400.396804.351903.36950K562CPSF6
VAMP2ENSG00000220205.42436.436401818.484400.421904.971203.65690K562CELF1
VAMP2ENSG00000220205.41553.375901250.580000.312703.450802.09640K562DDX21
VAMP2ENSG00000220205.41008.73520803.211900.328602.625701.61340K562DDX3X
VAMP2ENSG00000220205.41206.678101443.36160-0.258402.758202.10810K562DDX47
VAMP2ENSG00000220205.41075.72980814.368700.401504.519802.70750K562DDX6
VAMP2ENSG00000220205.4769.13920594.888800.370502.301301.46790K562EFTUD2
VAMP2ENSG00000220205.41066.02290882.336600.272702.619401.45060K562EIF2S1
VAMP2ENSG00000220205.4625.52040839.18720-0.423903.203502.32390K562EIF4A3
VAMP2ENSG00000220205.42010.262701478.656700.443006.232704.83920K562EIF4G2
VAMP2ENSG00000220205.41048.80150732.543200.517706.220604.12540K562EWSR1
VAMP2ENSG00000220205.41242.92170991.269900.326302.430301.63590K562FIP1L1
VAMP2ENSG00000220205.42033.423401352.532400.588107.044105.65340K562FMR1
VAMP2ENSG00000220205.41801.552801146.423200.652007.203705.65390K562FTO
VAMP2ENSG00000220205.41045.61120791.701200.401204.273902.03140K562FUBP3
VAMP2ENSG00000220205.4724.08050558.722100.373902.959701.56710K562FUS
VAMP2ENSG00000220205.4472.46890872.72430-0.8853014.9686013.67390K562FXR1
VAMP2ENSG00000220205.41066.59240765.099400.479204.764402.83680K562G3BP1
VAMP2ENSG00000220205.41283.18450908.685500.497806.754005.01770K562GLRX3
VAMP2ENSG00000220205.4920.91760673.574800.451103.787601.37960K562GRWD1
VAMP2ENSG00000220205.41121.53510880.222000.349403.017601.89330K562HNRNPA1
VAMP2ENSG00000220205.42760.066401355.774301.025506.315804.20950K562HNRNPA2B1
VAMP2ENSG00000220205.41805.640401233.919800.549203.264901.53640K562HNRNPAB
VAMP2ENSG00000220205.41511.98710774.836600.9644018.1234016.68080K562HNRNPC
VAMP2ENSG00000220205.41191.86820692.022000.7842011.159308.84710K562HNRNPF
VAMP2ENSG00000220205.41590.003101304.343000.285602.323301.36450K562HNRNPL
VAMP2ENSG00000220205.41241.21220974.760800.348503.539002.52770K562HNRNPU
VAMP2ENSG00000220205.41145.11190800.336900.516703.816502.53870K562IGF2BP2
VAMP2ENSG00000220205.41049.30520814.018200.366202.891401.66850K562IGF2BP3
VAMP2ENSG00000220205.43743.873502496.512300.5845010.174908.31480K562KIF1C
VAMP2ENSG00000220205.41590.816701083.695600.553704.128402.96750K562KRR1
VAMP2ENSG00000220205.41090.77590750.603200.539105.464003.41600K562LARP7
VAMP2ENSG00000220205.41141.14130786.056100.537704.797002.75390K562LIN28B
VAMP2ENSG00000220205.4945.82560691.121200.452504.008302.07900K562LSM11
VAMP2ENSG00000220205.4544.96810841.04150-0.626007.160105.77880K562MAGOH
VAMP2ENSG00000220205.43343.104002389.819400.484203.135801.97240K562MAK16
VAMP2ENSG00000220205.41604.127701238.758500.372803.579302.57590K562METAP2
VAMP2ENSG00000220205.42391.606901576.041500.601607.263605.47410K562MSI2
VAMP2ENSG00000220205.41733.86520955.367000.8598012.0181010.46750K562MTPAP
VAMP2ENSG00000220205.43157.927101960.311100.687806.746805.14680K562NAA15
VAMP2ENSG00000220205.41149.18940837.939200.455604.990303.33390K562NCBP2
VAMP2ENSG00000220205.41803.393601061.483600.7645025.8281023.91140K562NSUN2
VAMP2ENSG00000220205.41386.08870763.042000.8611011.793308.38450K562NUSAP1
VAMP2ENSG00000220205.41996.611901266.350200.656803.344101.96640K562PABPC1
VAMP2ENSG00000220205.41194.73730820.983300.541204.347202.03860K562PABPC4
VAMP2ENSG00000220205.43810.205001185.433201.6844015.0336012.14250K562PABPN1
VAMP2ENSG00000220205.41481.20490756.551800.9692017.5525014.18970K562PHF6
VAMP2ENSG00000220205.41582.31340964.530500.714008.184405.43410K562PKM
VAMP2ENSG00000220205.43119.915201408.871301.146906.979404.28320K562PPP1R8
VAMP2ENSG00000220205.41277.22480694.747800.8784013.5838011.27250K562PSIP1
VAMP2ENSG00000220205.41119.648001613.27810-0.526905.963204.77030K562PUF60
VAMP2ENSG00000220205.45890.436502332.903301.3361020.7299019.27500K562PUS1
VAMP2ENSG00000220205.41097.14860741.573100.565003.069601.56640K562RAVER1
VAMP2ENSG00000220205.44195.193602273.151900.8839028.6593026.67140K562RBM15
VAMP2ENSG00000220205.41154.81680736.692100.648404.369002.63960K562RBM25
VAMP2ENSG00000220205.42839.683801458.341700.961303.374301.63540K562RBM39
VAMP2ENSG00000220205.41010.80980633.990500.672908.762706.99610K562RCC2
VAMP2ENSG00000220205.41209.991101746.95330-0.529805.031703.62750K562RPS3
VAMP2ENSG00000220205.41760.056801200.857800.551502.975401.40040K562SBDS
VAMP2ENSG00000220205.41455.041901047.435600.474104.453603.43760K562SF3A3
VAMP2ENSG00000220205.43627.666201245.146601.5426012.245209.18230K562SNRNP200
VAMP2ENSG00000220205.4993.09190600.993300.724508.410106.34930K562SRFBP1
VAMP2ENSG00000220205.41342.931801073.122400.323504.283603.14620K562SRPK2
VAMP2ENSG00000220205.41129.17740756.572300.577606.027204.37720K562SRSF5
VAMP2ENSG00000220205.41501.226201116.041700.427705.815004.10140K562SRSF7
VAMP2ENSG00000220205.4852.25160651.888000.386603.755502.23420K562SSB
VAMP2ENSG00000220205.41720.784601189.444600.532705.207203.40900K562STAU1
VAMP2ENSG00000220205.43100.679401526.786801.022004.294101.80770K562SUGP2
VAMP2ENSG00000220205.43392.978601489.091401.188006.363903.95130K562SUPT6H
VAMP2ENSG00000220205.4782.22530560.410300.481003.118102.03900K562SUPV3L1
VAMP2ENSG00000220205.4668.244701050.54200-0.652708.748707.28850K562SYNCRIP
VAMP2ENSG00000220205.4744.03210510.902800.542203.992401.98670K562TFIP11
VAMP2ENSG00000220205.41021.82050782.031300.385703.423502.49820K562TIA1
VAMP2ENSG00000220205.41361.97550668.216201.0272014.9936012.69910K562TIAL1
VAMP2ENSG00000220205.41067.10140767.451700.475404.164702.77920K562TRA2A
VAMP2ENSG00000220205.41334.51860710.030800.9103014.1825011.64290K562TRIM56
VAMP2ENSG00000220205.41492.457001159.271300.364402.884101.46230K562TRIP6
VAMP2ENSG00000220205.41087.84600752.835400.531004.024302.65620K562U2AF1
VAMP2ENSG00000220205.42549.444501819.219100.486805.713603.74530K562UBE2L3
VAMP2ENSG00000220205.4902.59680593.168900.605505.353203.89420K562UCHL5
VAMP2ENSG00000220205.41663.500301125.514800.5635011.6892010.33990K562UPF1
VAMP2ENSG00000220205.41236.22000934.315300.403903.884901.88500K562UPF2
VAMP2ENSG00000220205.41732.88050963.065500.8474010.215708.49460K562WDR3
VAMP2ENSG00000220205.41353.655801001.489600.434607.090005.79420K562WDR43
VAMP2ENSG00000220205.42012.818201352.598100.573404.896903.69710K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for VAMP2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of VAMP2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for VAMP2 is not avaliable on ENCORE database.