TIMM17A

General Information

Gene Name       : TIMM17A
Gene ID             : ENSG00000134375.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TIMM17A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TIMM17AENSG00000134375.1052.5048.7050.60ENCSR000AEF
HepG2TIMM17AENSG00000134375.1043.8561.6252.73ENCSR985KAT
K562TIMM17AENSG00000134375.10111.3397.95104.64ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TIMM17A is not avaliable on ENCORE database.



Proteins bound to RNA
  • TIMM17A RNA is bound by 17 proteins.  







eCLIP assay for TIMM17A is not avaliable on ENCORE database.





17 proteins are bound to TIMM17A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1201938649201938703+3'-UTR,CDS3.647835.73713K562IGF2BP1
chr1201939083201939167+3'-UTR3.077184.50206K562SND1
chr1201939213201939269+3'-UTR4.005575.38549K562PUM2
chr1201938691201938761+3'-UTR4.251584.00100K562TIA1
chr1201938721201938817+3'-UTR3.079493.70380HepG2LARP4
chr1201938743201938811+3'-UTR4.1727814.39260HepG2SUB1
chr1201938982201939032+3'-UTR3.098027.24994K562YBX3
chr1201938679201938767+3'-UTR4.173683.01017K562CPSF6
chr1201939105201939176+3'-UTR4.236706.99270K562IGF2BP1
chr1201932750201932853+CDS3.267033.36366K562LIN28B
chr1201932777201932869+CDS4.233247.23394K562RPS3
chr1201926372201926454+CDS,intron-Proximal3.543169.30654K562AQR
chr1201926406201926510+CDS,intron-Proximal3.942155.80295HepG2PPIG
chr1201934605201934665+CDS3.807689.36842K562LIN28B
chr1201932749201932838+CDS4.126373.67596K562GRWD1
chr1201932824201932872+CDS3.752894.41267HepG2PPIG
chr1201938596201938636+CDS,intron-Proximal3.853713.15159HepG2LARP4
chr1201926851201926891+intron-Distal4.347433.85435K562PRPF8
chr1201928896201928999+intron-Distal4.998814.81080K562QKI
chr1201926772201926834+intron-Distal,intron-Proximal3.232094.35027K562EFTUD2
chr1201932561201932702+intron-Distal,intron-Proximal3.0073612.36947K562KHSRP
chr1201934743201934800+intron-Distal,intron-Proximal3.169925.42536K562KHSRP
chr1201926777201926846+intron-Distal,intron-Proximal3.615606.70109K562PRPF8
chr1201924769201924846+intron-Distal,intron-Proximal3.542983.54718K562PRPF8
chr1201924710201924809+intron-Distal,intron-Proximal3.7389510.03905K562TIA1
chr1201924725201924761+intron-Proximal3.662635.75231K562AQR
chr1201934696201934743+intron-Proximal3.766805.98773K562KHSRP
chr1201924680201924725+intron-Proximal4.7629819.25239K562AQR
chr1201926309201926381+intron-Proximal3.507034.98593K562KHSRP
chr1201924681201924769+intron-Proximal4.288117.44508K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TIMM17A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TIMM17A is not available on ENCORE database.

  • 109 RBPs can affect the levels of TIMM17A.  








The Knockdown/knockout RNA-Seq assay for TIMM17A is not available on ENCORE database.





109 RBPs can affect the gene expression of TIMM17A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TIMM17AENSG00000134375.61148.67010878.635700.386505.166004.38650HepG2ACO1
TIMM17AENSG00000134375.62379.607301480.899300.684107.017906.21360HepG2AKAP1
TIMM17AENSG00000134375.6719.05260882.72610-0.295902.605601.85810HepG2AKAP8L
TIMM17AENSG00000134375.61720.056101225.351000.489204.375703.39620HepG2ASCC1
TIMM17AENSG00000134375.6924.07370638.073300.534203.504402.65100HepG2CALR
TIMM17AENSG00000134375.61106.33600878.399400.332704.136903.35510HepG2CKAP4
TIMM17AENSG00000134375.61070.20570724.509900.562703.066302.25810HepG2CNOT7
TIMM17AENSG00000134375.61741.852001418.124300.296503.687502.96620HepG2CELF1
TIMM17AENSG00000134375.6516.96720666.95310-0.367502.761201.60330HepG2DDX1
TIMM17AENSG00000134375.6436.74190736.27520-0.753508.165807.06480HepG2DDX21
TIMM17AENSG00000134375.6746.11100529.989500.493303.587602.31470HepG2EFTUD2
TIMM17AENSG00000134375.6867.124701171.52770-0.434103.150302.51920HepG2EIF2S1
TIMM17AENSG00000134375.6741.94150516.083900.523603.707002.66910HepG2EIF3D
TIMM17AENSG00000134375.6267.057501294.75140-2.2775050.4485047.79830HepG2EIF4A3
TIMM17AENSG00000134375.61557.893901857.13330-0.253502.553101.97170HepG2ETF1
TIMM17AENSG00000134375.61213.03660858.543800.498605.425204.25530HepG2EWSR1
TIMM17AENSG00000134375.61035.07360701.621000.560905.937404.36720HepG2FASTKD2
TIMM17AENSG00000134375.6337.15010459.50620-0.446702.526501.67500HepG2GEMIN5
TIMM17AENSG00000134375.6181.10190768.65410-2.0855035.1313033.15480HepG2GPKOW
TIMM17AENSG00000134375.6193.01970734.40610-1.9278035.9823033.81610HepG2HNRNPC
TIMM17AENSG00000134375.6851.321401288.07840-0.597406.939405.87190HepG2HNRNPF
TIMM17AENSG00000134375.61058.26210700.710600.594704.319302.77430HepG2HSPD1
TIMM17AENSG00000134375.6840.931401268.40010-0.592907.666006.51630HepG2IGF2BP1
TIMM17AENSG00000134375.61561.671601231.749200.342302.404701.77040HepG2IGF2BP2
TIMM17AENSG00000134375.61095.95350743.200800.560305.673503.38960HepG2CCAR2
TIMM17AENSG00000134375.6434.22700803.15500-0.8872018.0442015.73520HepG2KIF1C
TIMM17AENSG00000134375.61003.33730700.172000.518903.139301.80370HepG2KRR1
TIMM17AENSG00000134375.61172.93310825.263400.507104.056902.01190HepG2LSM11
TIMM17AENSG00000134375.6497.64950748.12840-0.588203.279102.21730HepG2MTPAP
TIMM17AENSG00000134375.6914.526401344.90670-0.556404.692403.88090HepG2NCBP2
TIMM17AENSG00000134375.61007.42850664.016000.601303.928602.22630HepG2NKRF
TIMM17AENSG00000134375.6630.747801006.78100-0.674602.662501.59100HepG2NONO
TIMM17AENSG00000134375.6840.118801197.86600-0.511804.093903.22660HepG2PABPC4
TIMM17AENSG00000134375.6499.14620722.13390-0.532806.098504.91940HepG2PARN
TIMM17AENSG00000134375.61618.657701136.675200.509909.241608.23790HepG2PCBP1
TIMM17AENSG00000134375.6469.72090650.70150-0.470204.398103.48820HepG2PPIL4
TIMM17AENSG00000134375.61098.284201530.98290-0.479205.799204.84120HepG2PUM2
TIMM17AENSG00000134375.61188.30580894.940800.408905.796104.96390HepG2PUS1
TIMM17AENSG00000134375.6945.700001252.63200-0.405504.351103.59330HepG2QKI
TIMM17AENSG00000134375.61127.88250776.000200.539402.591901.90870HepG2RAVER1
TIMM17AENSG00000134375.62113.460701552.219900.445207.104706.36480HepG2RBM22
TIMM17AENSG00000134375.6870.113501198.85560-0.462406.357305.47770HepG2RECQL
TIMM17AENSG00000134375.61111.188501387.41820-0.320302.126401.51790HepG2RPLP0
TIMM17AENSG00000134375.61116.94480836.950800.416202.870402.07100HepG2RRP9
TIMM17AENSG00000134375.6996.645701383.96430-0.473705.830204.87390HepG2SLBP
TIMM17AENSG00000134375.6946.43550757.661500.320903.588802.87240HepG2SMN1
TIMM17AENSG00000134375.61998.474701256.902800.6689016.4572015.50930HepG2SRSF1
TIMM17AENSG00000134375.6833.705101265.45810-0.6021010.158608.97140HepG2SRSF7
TIMM17AENSG00000134375.61393.769901620.64350-0.217602.266401.69330HepG2SUCLG1
TIMM17AENSG00000134375.61086.47910731.726300.570204.831603.56800HepG2TFIP11
TIMM17AENSG00000134375.6581.26620708.90530-0.286401.842301.41620HepG2TIAL1
TIMM17AENSG00000134375.6910.80280715.231300.348603.706603.07460HepG2TRIM56
TIMM17AENSG00000134375.6994.58740705.208500.495904.099103.34060HepG2U2AF1
TIMM17AENSG00000134375.6926.02500774.050200.258502.203501.65570HepG2UTP3
TIMM17AENSG00000134375.6331.58600881.76230-1.4110042.2118040.73510HepG2ZNF622
TIMM17AENSG00000134375.62838.616902131.005200.413603.552402.19760K562AARS
TIMM17AENSG00000134375.63006.055804067.34570-0.436204.865403.22160K562ABCF1
TIMM17AENSG00000134375.62872.496802398.741000.259903.727003.08630K562AGGF1
TIMM17AENSG00000134375.63468.213702496.022000.474506.233105.22420K562AKAP8L
TIMM17AENSG00000134375.64014.641405978.60840-0.574507.682006.78510K562AQR
TIMM17AENSG00000134375.62817.133903358.47520-0.253603.055501.66060K562BCCIP
TIMM17AENSG00000134375.62666.229203245.35220-0.283604.544303.29650K562BCLAF1
TIMM17AENSG00000134375.61379.826902054.27350-0.574104.500503.37730K562BOP1
TIMM17AENSG00000134375.62188.655802833.02280-0.372302.830501.39520K562BUD13
TIMM17AENSG00000134375.6707.590801154.07750-0.705805.555503.93120K562CCAR1
TIMM17AENSG00000134375.61339.775402184.37930-0.705206.500305.29650K562CPSF6
TIMM17AENSG00000134375.61881.548202462.08290-0.388005.657804.06750K562CSTF2
TIMM17AENSG00000134375.6784.928501215.89550-0.631403.807001.58050K562DDX1
TIMM17AENSG00000134375.61986.678202449.02210-0.301803.864001.71270K562DDX24
TIMM17AENSG00000134375.61914.996902311.31370-0.271402.383101.41840K562DDX3X
TIMM17AENSG00000134375.63419.257502685.752700.348305.668704.36100K562DKC1
TIMM17AENSG00000134375.62015.730702538.76530-0.332805.127603.45270K562EIF2S1
TIMM17AENSG00000134375.62696.909404060.95620-0.5905010.386009.12870K562EIF2S2
TIMM17AENSG00000134375.61276.715402414.74730-0.9194017.6563015.43300K562EIF4A3
TIMM17AENSG00000134375.61568.991002174.60620-0.470907.355405.33370K562EIF4B
TIMM17AENSG00000134375.65001.471105828.38920-0.220702.660901.73720K562EIF4G2
TIMM17AENSG00000134375.61440.198102007.67900-0.479302.847801.56210K562EXOSC5
TIMM17AENSG00000134375.62270.497902913.70130-0.359804.027002.08070K562FASTKD2
TIMM17AENSG00000134375.61479.818802222.36600-0.586705.350804.15530K562FMR1
TIMM17AENSG00000134375.61217.501801883.57390-0.629506.046404.63950K562FTO
TIMM17AENSG00000134375.63685.862202511.234700.553507.391506.46680K562FXR1
TIMM17AENSG00000134375.62015.399702638.33110-0.388605.734704.12530K562GLRX3
TIMM17AENSG00000134375.6554.679102085.62250-1.9108024.4613021.92790K562GPKOW
TIMM17AENSG00000134375.64600.511305411.97560-0.234402.047801.39140K562GRSF1
TIMM17AENSG00000134375.6504.919202332.53380-2.2078038.8153036.65590K562HNRNPC
TIMM17AENSG00000134375.61536.109802082.60930-0.439104.097902.67680K562HNRNPF
TIMM17AENSG00000134375.64312.971702404.686300.842707.791806.10490K562HNRNPM
TIMM17AENSG00000134375.61217.366801780.65760-0.548604.100102.94440K562KRR1
TIMM17AENSG00000134375.61393.744402035.76740-0.546604.530103.39080K562METAP2
TIMM17AENSG00000134375.62016.197702773.85280-0.4603010.513609.04210K562MTPAP
TIMM17AENSG00000134375.61669.789802411.27710-0.530108.333806.23990K562NCBP2
TIMM17AENSG00000134375.61912.601402553.22970-0.416803.396801.93670K562NONO
TIMM17AENSG00000134375.62191.821503082.04640-0.4918016.9919015.35180K562NSUN2
TIMM17AENSG00000134375.62428.630803325.07130-0.453202.461001.31460K562PABPC1
TIMM17AENSG00000134375.61621.100502553.77090-0.655704.369803.32470K562PCBP3
TIMM17AENSG00000134375.61695.903302277.01090-0.425103.700302.00970K562PHF6
TIMM17AENSG00000134375.61402.880201958.94430-0.481702.075001.38130K562POLR2G
TIMM17AENSG00000134375.63312.434502522.820000.392804.057903.14770K562PRPF8
TIMM17AENSG00000134375.61626.264502091.26460-0.362802.819401.90540K562PSIP1
TIMM17AENSG00000134375.65011.586106627.42850-0.403207.983406.32790K562PUM2
TIMM17AENSG00000134375.64196.189902475.202900.7614012.8879011.76250K562PUS1
TIMM17AENSG00000134375.63470.338502411.849900.524809.220808.16090K562RBM15
TIMM17AENSG00000134375.63658.080505131.64690-0.488307.005904.52780K562RBM17
TIMM17AENSG00000134375.61343.150901907.54370-0.506105.758204.31980K562RCC2
TIMM17AENSG00000134375.62168.663402858.33520-0.398404.258802.06560K562RECQL
TIMM17AENSG00000134375.62255.283703041.12350-0.431307.581606.28390K562SF3A3
TIMM17AENSG00000134375.61362.084701983.21780-0.542004.683103.39610K562SF3B1
TIMM17AENSG00000134375.6903.269101271.31540-0.493103.233701.85490K562SLBP
TIMM17AENSG00000134375.61119.677101808.34850-0.691608.358706.30450K562SRFBP1
TIMM17AENSG00000134375.61858.235502518.71590-0.438803.419701.57050K562SRP68
TIMM17AENSG00000134375.62654.972203115.69040-0.230903.709002.64390K562SRPK2
TIMM17AENSG00000134375.64788.634303360.670400.510808.449207.21960K562SRSF1
TIMM17AENSG00000134375.62492.568603173.67260-0.348503.222402.07190K562SRSF5
TIMM17AENSG00000134375.62222.656402809.30440-0.337905.122903.29060K562SSB
TIMM17AENSG00000134375.62646.532703508.65310-0.406803.705602.22140K562STAU1
TIMM17AENSG00000134375.64602.104305548.50510-0.269803.159001.55590K562SUCLG1
TIMM17AENSG00000134375.61716.392502443.30270-0.509503.495002.33810K562SUPV3L1
TIMM17AENSG00000134375.62434.642203401.41560-0.482405.310404.31270K562TARDBP
TIMM17AENSG00000134375.62380.352603280.99740-0.463006.623405.27690K562TIA1
TIMM17AENSG00000134375.61234.466502011.50300-0.704405.488104.12610K562TIAL1
TIMM17AENSG00000134375.61527.638702136.44380-0.483903.442402.36610K562TRIM56
TIMM17AENSG00000134375.62531.746103420.37280-0.434004.344902.49450K562TRIP6
TIMM17AENSG00000134375.61579.532202585.60100-0.711005.903404.35860K562UCHL5
TIMM17AENSG00000134375.62376.702803267.95540-0.4594010.915809.60570K562UPF1
TIMM17AENSG00000134375.62327.500202987.89100-0.360302.835501.62020K562UTP3
TIMM17AENSG00000134375.61693.278702796.29230-0.7237013.2612011.29400K562WDR3
TIMM17AENSG00000134375.64941.741707082.33780-0.519208.050605.90780K562WRN
TIMM17AENSG00000134375.63332.211702152.246100.630503.336501.55760K562XRCC6
TIMM17AENSG00000134375.61853.686402632.33750-0.505903.734402.25450K562XRN2
TIMM17AENSG00000134375.64665.310406735.69690-0.529906.517505.10340K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TIMM17A is not available on ENCORE database.





6 RBPs can affect the splicing of TIMM17A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETIMM17AENSG00000134375.6chr1+2019266382019267022019246182019246802019345602019346710.123000.009320.07674includedK562AQR
SETIMM17AENSG00000134375.6chr1+201926408201926508201924633201924680201926638201926702-0.075000.000000.00000excludedK562AQR
SETIMM17AENSG00000134375.6chr1+2019279662019280362019266382019267022019327432019328720.052000.000000.00000includedK562EIF3G
A3SSTIMM17AENSG00000134375.6chr1+2019326962019328722019327432019328722019266382019267020.056000.000000.00000longerK562AQR
A5SSTIMM17AENSG00000134375.6chr1+2019246182019248002019246182019246802019264082019265080.054000.000000.00000longerK562AQR
MXETIMM17AENSG00000134375.6chr1+2019266382019267022019345602019348052019246182019246802019385962019397890.102000.001940.016231includedK562AQR
MXETIMM17AENSG00000134375.6chr1+2019266382019267022019345602019346712019246182019246802019385962019397890.090000.000000.000001includedK562AQR
MXETIMM17AENSG00000134375.6chr1+2019327122019328722019345112019346712019266382019267022019385962019394790.058000.000000.000001includedK562AQR
MXETIMM17AENSG00000134375.6chr1+2019327122019328722019345602019346712019266382019267022019385962019388450.058000.000000.000001includedK562AQR
MXETIMM17AENSG00000134375.6chr1+2019326962019328722019345112019346712019266382019267022019385962019394790.060000.000000.000001includedK562AQR
MXETIMM17AENSG00000134375.6chr1+2019326962019328722019345602019346712019266382019267022019385962019388450.059000.000000.000001includedK562AQR
MXETIMM17AENSG00000134375.6chr1+201926638201926702201934560201934671201926408201926508201938596201938845-0.081000.001850.015572includedK562AQR
MXETIMM17AENSG00000134375.6chr1+201932743201932872201934560201934671201926638201926702201938596201938845-0.150000.000020.003062includedHepG2BCCIP
MXETIMM17AENSG00000134375.6chr1+201932743201932872201934560201934671201926638201926702201938596201938845-0.141000.000110.006652includedHepG2XRN2
MXETIMM17AENSG00000134375.6chr1+201932743201932872201934560201934671201926638201926702201938596201938845-0.129000.000250.008662includedHepG2DDX55
MXETIMM17AENSG00000134375.6chr1+2019266382019267022019327432019328722019246332019246802019345602019346710.080000.000000.000001includedK562SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TIMM17A is not avaliable on ENCORE database.