SUCLA2

General Information

Gene Name       : SUCLA2
Gene ID             : ENSG00000136143.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SUCLA2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SUCLA2ENSG00000136143.1527.1325.0426.09ENCSR000AEF
HepG2SUCLA2ENSG00000136143.1526.3945.8636.12ENCSR985KAT
K562SUCLA2ENSG00000136143.1520.2721.8221.05ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SUCLA2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SUCLA2 RNA is bound by 9 proteins.  







eCLIP assay for SUCLA2 is not avaliable on ENCORE database.





9 proteins are bound to SUCLA2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr134851738548517433-3'-UTR,intron-Distal,intron-Proximal5.627447.71888HepG2SUB1
chr134856280648562839-5'-UTR,CDS,intron-Distal,intron-Proximal4.144984.93978HepG2BCLAF1
chr134856301448563065-5'-UTR,CDS,intron-Distal,intron-Proximal4.898695.52963HepG2PPIG
chr134856299948563060-5'-UTR,CDS,intron-Distal,intron-Proximal4.927655.68502HepG2PRPF8
chr134856301548563069-5'-UTR,CDS,intron-Distal,intron-Proximal5.0030813.83301HepG2BCLAF1
chr134857531548575400-5'-UTR,CDS,intron-Distal,intron-Proximal3.252663.95805K562DDX3X
chr134856281748562839-5'-UTR,CDS,intron-Distal,intron-Proximal3.497663.05460HepG2PPIG
chr134852308948523150-CDS,intron-Distal3.865923.11282HepG2G3BP1
chr134854279348542830-CDS,intron-Distal4.422593.45943HepG2BCLAF1
chr134854739648547433-CDS,intron-Distal,intron-Proximal3.565886.36847HepG2BCLAF1
chr134852834048528421-CDS,intron-Distal,intron-Proximal4.461597.53358HepG2BCLAF1
chr134852854448528658-CDS,intron-Distal,intron-Proximal4.055967.91821HepG2GRWD1
chr134852312848523163-CDS,intron-Distal4.261623.38968HepG2BCLAF1
chr134854739348547443-CDS,intron-Distal,intron-Proximal4.244183.82843HepG2PPIG
chr134853405648534169-intron-Distal3.648104.77135HepG2HNRNPL
chr134861075948610832-intron-Distal4.280734.24565HepG2HNRNPL
chr134853352848533637-intron-Distal6.5063520.08804HepG2PCBP2
chr134853205048532112-intron-Distal3.873846.08725HepG2HNRNPL
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SUCLA2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SUCLA2 is not available on ENCORE database.

  • 116 RBPs can affect the levels of SUCLA2.  








The Knockdown/knockout RNA-Seq assay for SUCLA2 is not available on ENCORE database.





116 RBPs can affect the gene expression of SUCLA2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SUCLA2ENSG00000136143.9649.98070932.50090-0.520707.570006.66520HepG2ACO1
SUCLA2ENSG00000136143.9511.62500672.09620-0.393602.448601.50940HepG2ADAR
SUCLA2ENSG00000136143.91140.215201644.11640-0.528004.080703.45230HepG2AKAP1
SUCLA2ENSG00000136143.9666.67520936.86900-0.490906.361605.24310HepG2AKAP8L
SUCLA2ENSG00000136143.9816.761201360.39200-0.736008.211306.90180HepG2ASCC1
SUCLA2ENSG00000136143.9582.15920846.04720-0.539303.555502.49490HepG2BCCIP
SUCLA2ENSG00000136143.9425.66100693.36380-0.703906.694605.81090HepG2BOP1
SUCLA2ENSG00000136143.9760.226901060.14970-0.479802.908901.90840HepG2CCAR1
SUCLA2ENSG00000136143.9754.80830932.28250-0.304703.208902.50250HepG2CKAP4
SUCLA2ENSG00000136143.9495.47520636.54250-0.361402.024901.42680HepG2CPSF6
SUCLA2ENSG00000136143.9463.53880695.80230-0.586004.974503.51930HepG2CPSF7
SUCLA2ENSG00000136143.9895.957601140.41870-0.348103.707802.98560HepG2CELF1
SUCLA2ENSG00000136143.9446.52900708.79130-0.666606.555105.56070HepG2DDX21
SUCLA2ENSG00000136143.91269.707001574.99000-0.310801.950101.41620HepG2DDX3X
SUCLA2ENSG00000136143.9500.92960831.84510-0.731705.972104.88920HepG2DDX55
SUCLA2ENSG00000136143.9683.532601352.82910-0.9849011.8880010.71470HepG2DDX6
SUCLA2ENSG00000136143.9471.48480652.74780-0.469303.521402.42250HepG2DHX30
SUCLA2ENSG00000136143.9540.87200676.78050-0.323402.444001.77850HepG2DNAJC21
SUCLA2ENSG00000136143.9475.12100670.77650-0.497506.012205.10490HepG2DNAJC2
SUCLA2ENSG00000136143.9745.466801300.62650-0.803009.259108.21380HepG2EIF2S1
SUCLA2ENSG00000136143.9393.31480556.13590-0.499802.602701.72250HepG2EIF3D
SUCLA2ENSG00000136143.91062.872101437.40270-0.435503.012402.34580HepG2EIF4A3
SUCLA2ENSG00000136143.9756.667601399.40330-0.887108.160307.00890HepG2EIF4B
SUCLA2ENSG00000136143.9362.04230497.03580-0.457203.275101.98970HepG2FAM120A
SUCLA2ENSG00000136143.9524.34940853.00020-0.702005.251504.21870HepG2FIP1L1
SUCLA2ENSG00000136143.9550.34430920.56670-0.742205.471603.93790HepG2FUS
SUCLA2ENSG00000136143.9952.953801450.10490-0.605706.028205.03340HepG2FXR1
SUCLA2ENSG00000136143.9720.164501345.27650-0.9015010.971309.68830HepG2G3BP1
SUCLA2ENSG00000136143.9984.463401428.06370-0.536704.982603.77830HepG2G3BP2
SUCLA2ENSG00000136143.9363.31380495.16900-0.446702.599801.73580HepG2GEMIN5
SUCLA2ENSG00000136143.9518.68910738.30430-0.509303.429102.29040HepG2GNB2L1
SUCLA2ENSG00000136143.9665.21430890.26190-0.420404.961303.69160HepG2HDGF
SUCLA2ENSG00000136143.9459.63720759.99560-0.725507.283206.20060HepG2HNRNPC
SUCLA2ENSG00000136143.91028.868701362.00040-0.404703.251502.49490HepG2HNRNPK
SUCLA2ENSG00000136143.9923.579101117.05600-0.274402.971902.27550HepG2HNRNPL
SUCLA2ENSG00000136143.9538.25360688.60020-0.355401.970001.43070HepG2HNRNPLL
SUCLA2ENSG00000136143.9382.58320588.62030-0.621605.235003.97200HepG2HNRNPM
SUCLA2ENSG00000136143.9280.263801367.47680-2.2867058.7802056.20140HepG2IGF2BP2
SUCLA2ENSG00000136143.9632.423201283.18660-1.020805.036903.72580HepG2IGF2BP3
SUCLA2ENSG00000136143.9618.33320771.18010-0.318703.051502.28450HepG2ILF2
SUCLA2ENSG00000136143.9966.808701375.38700-0.508503.357402.24080HepG2KHSRP
SUCLA2ENSG00000136143.9852.663601119.10970-0.392302.184101.45340HepG2LARP4
SUCLA2ENSG00000136143.9933.713901450.61030-0.635606.343305.35860HepG2MAGOH
SUCLA2ENSG00000136143.9892.872201458.75760-0.708206.897205.93300HepG2MATR3
SUCLA2ENSG00000136143.9367.13570582.05060-0.664803.109901.99230HepG2METAP2
SUCLA2ENSG00000136143.9463.37120690.50050-0.575504.794203.75010HepG2MSI2
SUCLA2ENSG00000136143.9854.420201493.14250-0.805309.263708.14550HepG2NCBP2
SUCLA2ENSG00000136143.9742.400501215.96910-0.7118011.7626010.23530HepG2NOL12
SUCLA2ENSG00000136143.9580.109601329.84660-1.1969018.8949017.05050HepG2PABPC4
SUCLA2ENSG00000136143.9381.75910747.30430-0.9690017.1362015.35620HepG2PARN
SUCLA2ENSG00000136143.9791.886201311.86940-0.7283015.5304014.28040HepG2PCBP1
SUCLA2ENSG00000136143.9554.73370871.45650-0.651604.171502.91320HepG2PCBP2
SUCLA2ENSG00000136143.9292.93090459.90950-0.650805.451403.74130HepG2PKM
SUCLA2ENSG00000136143.9461.16240673.37600-0.546105.772104.74030HepG2PPIL4
SUCLA2ENSG00000136143.9679.89900486.815100.481804.889303.89170HepG2PRPF4
SUCLA2ENSG00000136143.9821.726701334.84460-0.6999013.6064012.57470HepG2PTBP1
SUCLA2ENSG00000136143.9862.544801232.15850-0.514509.783608.81330HepG2PUM1
SUCLA2ENSG00000136143.9915.119301231.26750-0.428104.606603.75200HepG2PUM2
SUCLA2ENSG00000136143.9981.945801445.73700-0.558108.221107.23210HepG2QKI
SUCLA2ENSG00000136143.9725.78040922.94250-0.346702.692801.84460HepG2RBM15
SUCLA2ENSG00000136143.91044.609201306.84210-0.323102.823602.30150HepG2RBM22
SUCLA2ENSG00000136143.9909.212201312.07380-0.529206.242405.26630HepG2RBM25
SUCLA2ENSG00000136143.9911.770801485.58010-0.7043014.6645013.60490HepG2NELFE
SUCLA2ENSG00000136143.9993.737001383.56840-0.477507.445006.50670HepG2RECQL
SUCLA2ENSG00000136143.9293.45410541.14120-0.882909.329808.28020HepG2RPS19
SUCLA2ENSG00000136143.9368.64030672.34110-0.8670014.1719012.88210HepG2SAFB2
SUCLA2ENSG00000136143.9317.07560543.12510-0.776506.537505.10710HepG2SERBP1
SUCLA2ENSG00000136143.9527.223901022.81680-0.956102.836401.46330HepG2SF1
SUCLA2ENSG00000136143.91006.620001389.80220-0.465407.082906.20650HepG2SF3B4
SUCLA2ENSG00000136143.9430.25470991.85620-1.204903.838302.07120HepG2SFPQ
SUCLA2ENSG00000136143.9517.67680784.07250-0.598909.001307.94670HepG2SMN1
SUCLA2ENSG00000136143.9481.45850913.32070-0.923702.942601.58230HepG2SNRNP200
SUCLA2ENSG00000136143.9516.93500758.37130-0.552902.810102.02370HepG2SNRNP70
SUCLA2ENSG00000136143.9769.287101146.04080-0.575109.378708.31840HepG2SRSF5
SUCLA2ENSG00000136143.9760.527101180.14440-0.6339012.2000011.18690HepG2SRSF9
SUCLA2ENSG00000136143.9357.64600569.87370-0.672104.516502.97110HepG2STAU1
SUCLA2ENSG00000136143.9428.95000590.72770-0.461702.469001.43850HepG2STIP1
SUCLA2ENSG00000136143.9986.863401303.37900-0.401305.960705.11070HepG2SUCLG1
SUCLA2ENSG00000136143.9329.84200576.10490-0.804608.331206.76180HepG2SUPT6H
SUCLA2ENSG00000136143.91016.938701303.81810-0.358504.049903.39170HepG2TAF15
SUCLA2ENSG00000136143.9495.97070671.19590-0.436502.907302.16660HepG2TARDBP
SUCLA2ENSG00000136143.9898.343101198.09930-0.415404.225103.20080HepG2TIA1
SUCLA2ENSG00000136143.9559.32030733.63070-0.391403.164402.63550HepG2TIAL1
SUCLA2ENSG00000136143.9377.38260740.15160-0.9718017.9807016.70650HepG2TRIM56
SUCLA2ENSG00000136143.9925.684701133.96660-0.292802.178801.40930HepG2TUFM
SUCLA2ENSG00000136143.9447.187201063.43520-1.249804.457603.19230HepG2U2AF2
SUCLA2ENSG00000136143.9630.297201200.27020-0.9293010.385008.72660HepG2UBE2L3
SUCLA2ENSG00000136143.9642.99250815.89600-0.343603.070901.97360HepG2UTP18
SUCLA2ENSG00000136143.9580.05800766.35970-0.401804.009703.30800HepG2UTP3
SUCLA2ENSG00000136143.9599.44520815.15580-0.443402.868502.13030HepG2XRN2
SUCLA2ENSG00000136143.9594.84440480.440500.308102.295001.67620HepG2ZC3H8
SUCLA2ENSG00000136143.9303.46540873.00150-1.5245047.3407045.79880HepG2ZNF622
SUCLA2ENSG00000136143.9710.38280940.15120-0.404302.854001.60670K562ABCF1
SUCLA2ENSG00000136143.9599.093601263.60490-1.0767017.0242015.73080K562AQR
SUCLA2ENSG00000136143.9261.90640500.82730-0.935308.336806.78220K562BOP1
SUCLA2ENSG00000136143.9156.08680223.71890-0.519302.314301.36770K562CCAR1
SUCLA2ENSG00000136143.9502.31970805.96690-0.682103.617802.37380K562CNOT7
SUCLA2ENSG00000136143.9686.32580858.19230-0.322402.548201.48690K562CPEB4
SUCLA2ENSG00000136143.9339.37950532.53330-0.650005.713304.59430K562CPSF6
SUCLA2ENSG00000136143.9672.50750873.80450-0.377803.610102.80650K562EIF2S2
SUCLA2ENSG00000136143.9408.56310575.92740-0.495303.604502.67080K562EIF4A3
SUCLA2ENSG00000136143.9345.47670518.65110-0.586205.511203.79440K562EIF4B
SUCLA2ENSG00000136143.9400.93200541.82030-0.434502.607301.77810K562FMR1
SUCLA2ENSG00000136143.9295.24660459.23300-0.637304.248603.09460K562FTO
SUCLA2ENSG00000136143.9337.45490508.44640-0.591404.297703.31370K562GPKOW
SUCLA2ENSG00000136143.9886.550701164.45080-0.393403.226102.41230K562GRSF1
SUCLA2ENSG00000136143.9271.73930511.12470-0.911508.942607.92030K562HNRNPC
SUCLA2ENSG00000136143.9262.00470715.53220-1.4494017.1633014.22480K562IGF2BP2
SUCLA2ENSG00000136143.9524.32550727.96690-0.473402.442601.34370K562IGF2BP3
SUCLA2ENSG00000136143.9266.03270434.12850-0.706503.861902.74540K562KRR1
SUCLA2ENSG00000136143.9367.07890518.30720-0.497702.966901.45530K562LIN28B
SUCLA2ENSG00000136143.9532.75870750.96490-0.495303.162402.17250K562MATR3
SUCLA2ENSG00000136143.9316.61200496.29700-0.648505.295804.05930K562METAP2
SUCLA2ENSG00000136143.9464.63810643.36640-0.469504.457503.45210K562MTPAP
SUCLA2ENSG00000136143.9539.30060714.81780-0.406504.262803.35830K562NSUN2
SUCLA2ENSG00000136143.9336.12690503.18640-0.582103.351301.72010K562NUSAP1
SUCLA2ENSG00000136143.9338.99290498.98400-0.557703.771802.06680K562PHF6
SUCLA2ENSG00000136143.9260.47210458.26510-0.815106.422604.95250K562PSIP1
SUCLA2ENSG00000136143.91241.873901603.35630-0.368604.588503.34310K562PUM2
SUCLA2ENSG00000136143.9863.15800654.957300.398102.595602.06610K562PUS1
SUCLA2ENSG00000136143.9289.00780418.05100-0.532603.532502.41410K562RCC2
SUCLA2ENSG00000136143.9552.92230705.37260-0.351302.945202.10650K562SF3A3
SUCLA2ENSG00000136143.9315.12830483.52090-0.617603.739002.59920K562SF3B1
SUCLA2ENSG00000136143.9430.55460705.17570-0.711802.748101.45510K562SFPQ
SUCLA2ENSG00000136143.9230.74940396.30710-0.780305.500403.91070K562SRFBP1
SUCLA2ENSG00000136143.9373.66390530.94730-0.506802.625101.63680K562SUPV3L1
SUCLA2ENSG00000136143.9452.71740725.32190-0.680003.646302.83030K562TARDBP
SUCLA2ENSG00000136143.9280.90390440.78130-0.650004.114102.95400K562TIAL1
SUCLA2ENSG00000136143.9267.99270468.21000-0.805006.563304.96110K562TRIM56
SUCLA2ENSG00000136143.91311.259501734.71170-0.403704.364202.60120K562UBE2L3
SUCLA2ENSG00000136143.9610.27720757.93800-0.312602.691701.98220K562UPF1
SUCLA2ENSG00000136143.9511.47990648.54100-0.342502.264401.47260K562WDR3
SUCLA2ENSG00000136143.9378.48210571.98110-0.595703.700602.23040K562XRN2
SUCLA2ENSG00000136143.91127.720801423.58120-0.336102.800601.93100K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SUCLA2 is not available on ENCORE database.





5 RBPs can affect the splicing of SUCLA2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESUCLA2ENSG00000136143.9chr13-4853097448531013485285874852869248542729485428680.056000.000120.01662includedHepG2G3BP1
SESUCLA2ENSG00000136143.9chr13-485709774857115848563016485631164857531548575424-0.101000.004630.06972excludedK562SF3B4
SESUCLA2ENSG00000136143.9chr13-485709774857115848563016485631164857531548575424-0.128000.001630.07307excludedK562EFTUD2
SESUCLA2ENSG00000136143.9chr13-4853971248539775485285874852869248542729485428680.074000.000170.00977includedK562PTBP1
A3SSSUCLA2ENSG00000136143.9chr13-4854272948542883485427294854286848547398485475270.111000.000000.00001longerK562AQR
A3SSSUCLA2ENSG00000136143.9chr13-4852361748523787485236174852373848528274485284170.055000.000820.00580longerK562AQR
A3SSSUCLA2ENSG00000136143.9chr13-4854739848547555485473984854752748562675485628380.080000.000120.00103longerK562AQR
A3SSSUCLA2ENSG00000136143.9chr13-4852858748528802485285874852869248542729485428830.131000.000000.00000longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SUCLA2 is not avaliable on ENCORE database.