STXBP1

General Information

Gene Name       : STXBP1
Gene ID             : ENSG00000136854.20
Essential Gene : No

Functions

Localization

Domains (AlphaFold: STXBP1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878STXBP1ENSG00000136854.200.950.060.51ENCSR000AEF
HepG2STXBP1ENSG00000136854.203.833.223.53ENCSR985KAT
K562STXBP1ENSG00000136854.2014.5915.9815.29ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for STXBP1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • STXBP1 RNA is bound by 16 proteins.  







eCLIP assay for STXBP1 is not avaliable on ENCORE database.





16 proteins are bound to STXBP1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr9130453214130453279+3'-UTR,intron-Distal3.436575.87323K562IGF2BP2
chr9130453665130453700+3'-UTR,intron-Distal5.139429.55253K562LIN28B
chr9130454817130454934+3'-UTR,intron-Distal6.153949.80245K562PABPC4
chr9130453150130453214+3'-UTR,intron-Distal4.620266.33394K562IGF2BP2
chr9130454116130454229+3'-UTR,intron-Distal4.864966.00568K562IGF2BP1
chr9130454914130454955+3'-UTR,intron-Distal4.159624.77486K562YBX3
chr9130454038130454091+3'-UTR,intron-Distal3.749846.44064K562LIN28B
chr9130453700130453747+3'-UTR,intron-Distal4.9956218.24297K562LIN28B
chr9130454112130454149+3'-UTR,intron-Distal3.945183.39506K562IGF2BP2
chr9130453440130453506+3'-UTR,intron-Distal5.8457618.80111K562PUM2
chr9130374562130374720+5'-UTR,CDS,intron-Proximal4.645155.47892K562DDX3X
chr9130444754130444819+CDS,intron-Proximal4.910749.12048K562YBX3
chr9130435427130435497+CDS,intron-Proximal4.618604.48002K562AQR
chr9130415993130416076+CDS,intron-Proximal3.437065.39086K562UCHL5
chr9130415994130416054+CDS3.351884.03389K562ZNF622
chr9130434329130434374+CDS,intron-Proximal3.745184.49887K562ZNF622
chr9130425552130425574+CDS3.467565.32768K562YBX3
chr9130375239130375289+intron-Distal4.946446.57498HepG2PCBP2
chr9130417118130417227+intron-Distal4.152834.79379K562KHSRP
chr9130416149130416211+intron-Distal,intron-Proximal4.346093.12827HepG2U2AF2
chr9130375024130375234+intron-Distal4.883617.98391HepG2HNRNPK
chr9130375145130375217+intron-Distal4.648635.36996HepG2PCBP2
chr9130375744130375838+intron-Distal4.486905.54639K562CSTF2T
chr9130375283130375355+intron-Distal5.229217.82308HepG2DDX59
chr9130374974130375047+intron-Distal3.740494.60998HepG2PCBP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for STXBP1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for STXBP1 is not available on ENCORE database.

  • 99 RBPs can affect the levels of STXBP1.  








The Knockdown/knockout RNA-Seq assay for STXBP1 is not available on ENCORE database.





99 RBPs can affect the gene expression of STXBP1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
STXBP1ENSG00000136854.13247.56470169.818400.543702.333801.34560HepG2AATF
STXBP1ENSG00000136854.13226.98620417.53180-0.879306.048904.71610HepG2ABCF1
STXBP1ENSG00000136854.13427.01380249.948100.772606.858105.98730HepG2ACO1
STXBP1ENSG00000136854.13334.77990186.207200.846206.033204.63440HepG2ADAR
STXBP1ENSG00000136854.13778.40760453.331500.779905.020904.33060HepG2AKAP1
STXBP1ENSG00000136854.13744.51970375.060200.9891010.745509.27190HepG2ASCC1
STXBP1ENSG00000136854.13533.14880376.643700.501202.978701.52190HepG2ATP5C1
STXBP1ENSG00000136854.13825.17200331.907201.3138029.9749028.14120HepG2AUH
STXBP1ENSG00000136854.13553.05470312.747400.822307.771905.81060HepG2BUD13
STXBP1ENSG00000136854.13965.63000448.776901.1054011.758809.79140HepG2CCAR1
STXBP1ENSG00000136854.13201.23610356.34380-0.824403.604102.73020HepG2CIRBP
STXBP1ENSG00000136854.13422.24330249.795600.757204.874604.03880HepG2CKAP4
STXBP1ENSG00000136854.13488.69080343.749800.507503.174201.98790HepG2CPSF7
STXBP1ENSG00000136854.13435.33440262.294200.730807.130806.18940HepG2CELF1
STXBP1ENSG00000136854.13284.11690187.513200.599403.055902.34510HepG2DDX21
STXBP1ENSG00000136854.13622.97810434.185100.520803.227202.55830HepG2DDX3X
STXBP1ENSG00000136854.13155.96080230.90720-0.566102.081801.40130HepG2DDX55
STXBP1ENSG00000136854.13559.11040373.143900.583303.434402.75400HepG2DDX6
STXBP1ENSG00000136854.13307.81760187.489100.715202.240701.60200HepG2DNAJC21
STXBP1ENSG00000136854.13383.51490172.565901.152008.744806.85400HepG2AGO1
STXBP1ENSG00000136854.13497.13730358.543700.471402.529801.96260HepG2EIF2S1
STXBP1ENSG00000136854.13485.60750381.075000.349602.244501.69370HepG2ETF1
STXBP1ENSG00000136854.13361.80650240.186700.591002.749101.63720HepG2FUS
STXBP1ENSG00000136854.13278.00220161.368000.784604.686203.51660HepG2GEMIN5
STXBP1ENSG00000136854.13837.08740520.580100.685205.720204.82260HepG2GPKOW
STXBP1ENSG00000136854.13134.00960230.40930-0.781902.903801.49020HepG2HLTF
STXBP1ENSG00000136854.13388.67330189.285601.037908.902607.83980HepG2HNRNPA1
STXBP1ENSG00000136854.13336.18180210.554700.674903.896603.08450HepG2HNRNPC
STXBP1ENSG00000136854.13429.96220256.889200.743007.896706.81180HepG2HNRNPL
STXBP1ENSG00000136854.13812.47790496.798400.709606.511405.59030HepG2HNRNPLL
STXBP1ENSG00000136854.13192.69270290.82080-0.593803.409602.36340HepG2HNRNPM
STXBP1ENSG00000136854.13997.18560526.946500.920108.817206.68200HepG2HSPD1
STXBP1ENSG00000136854.131311.23060376.944801.7984038.5426036.35900HepG2IGF2BP2
STXBP1ENSG00000136854.13788.20030526.569000.581803.565702.14200HepG2KRR1
STXBP1ENSG00000136854.131094.83790474.122001.2073014.5162012.64930HepG2LARP4
STXBP1ENSG00000136854.13401.94350189.680401.083304.396703.08980HepG2METAP2
STXBP1ENSG00000136854.13170.39180341.11590-1.001408.198606.87390HepG2MSI2
STXBP1ENSG00000136854.13466.36690286.457500.703005.692003.95770HepG2NAA15
STXBP1ENSG00000136854.13409.39790279.646200.549804.081103.15430HepG2NOL12
STXBP1ENSG00000136854.13392.52990212.046400.888303.968802.64140HepG2NONO
STXBP1ENSG00000136854.13527.61620366.522700.525503.149702.38130HepG2PABPC4
STXBP1ENSG00000136854.13833.68260405.856201.0384020.7001019.29030HepG2PCBP1
STXBP1ENSG00000136854.13540.98230412.959800.389502.805002.25410HepG2PTBP1
STXBP1ENSG00000136854.13409.77380266.951100.618204.329203.60300HepG2PUF60
STXBP1ENSG00000136854.13781.05470254.574001.6172043.6314041.77800HepG2PUS1
STXBP1ENSG00000136854.13667.28110318.507901.0669016.4845015.43490HepG2RBM22
STXBP1ENSG00000136854.13516.10470405.920000.346401.901601.33310HepG2RBM25
STXBP1ENSG00000136854.13576.97170279.765201.044203.085101.37380HepG2RBM39
STXBP1ENSG00000136854.13331.78490459.59630-0.470103.398002.81110HepG2NELFE
STXBP1ENSG00000136854.13322.59950428.03040-0.408002.662902.05670HepG2RECQL
STXBP1ENSG00000136854.13391.67030215.561900.861405.027703.77700HepG2RPS10
STXBP1ENSG00000136854.13375.69170176.353501.0910010.028708.94640HepG2RPS19
STXBP1ENSG00000136854.13106.70970186.26240-0.803604.346803.57090HepG2SAFB2
STXBP1ENSG00000136854.13326.54800255.975000.351201.948601.34130HepG2SLBP
STXBP1ENSG00000136854.13355.53230217.204000.710806.390805.47730HepG2SMN1
STXBP1ENSG00000136854.13835.82400547.142000.611203.388902.51940HepG2SNRNP70
STXBP1ENSG00000136854.13660.06260359.742600.8755012.9991012.12680HepG2SRFBP1
STXBP1ENSG00000136854.13337.15400448.78490-0.412602.736702.26560HepG2SRSF1
STXBP1ENSG00000136854.13461.33310263.581500.807509.076508.03060HepG2SRSF5
STXBP1ENSG00000136854.13439.83380283.547700.633305.070504.17320HepG2SRSF7
STXBP1ENSG00000136854.13484.70130312.341000.633906.402005.68090HepG2SSB
STXBP1ENSG00000136854.13409.18030284.599400.523703.260502.24540HepG2SUPT6H
STXBP1ENSG00000136854.13572.28530229.860501.3159012.6245011.35640HepG2SUPV3L1
STXBP1ENSG00000136854.13449.72590203.204401.1460013.9649012.99120HepG2TIAL1
STXBP1ENSG00000136854.13665.11070205.059101.6975041.5639039.71120HepG2TRIM56
STXBP1ENSG00000136854.13378.65710260.808300.537803.336702.36990HepG2TUFM
STXBP1ENSG00000136854.13130.11900360.58950-1.4705014.2825012.81920HepG2U2AF1
STXBP1ENSG00000136854.13120.41740319.98100-1.409903.434402.33120HepG2U2AF2
STXBP1ENSG00000136854.13239.93140135.782900.821204.555103.57850HepG2UCHL5
STXBP1ENSG00000136854.13549.83770434.665500.339002.358501.38020HepG2UTP18
STXBP1ENSG00000136854.13366.68430287.574500.350501.995901.41120HepG2ZC3H8
STXBP1ENSG00000136854.13619.06150465.085600.412504.099303.46920HepG2ZNF622
STXBP1ENSG00000136854.13742.877501537.69610-1.0496018.4156015.58820K562ABCF1
STXBP1ENSG00000136854.131306.430101630.36220-0.319602.568401.62700K562AKAP8
STXBP1ENSG00000136854.131124.078301485.13210-0.401803.613002.17410K562APOBEC3C
STXBP1ENSG00000136854.13917.12230714.176000.360703.594702.49370K562BCLAF1
STXBP1ENSG00000136854.13992.54400695.307800.513402.849501.77540K562CCAR1
STXBP1ENSG00000136854.13527.49150899.95110-0.770709.140306.97960K562CIRBP
STXBP1ENSG00000136854.13719.57470541.809000.409303.249802.09390K562CSTF2
STXBP1ENSG00000136854.131427.578001677.78850-0.233002.438501.82100K562DDX47
STXBP1ENSG00000136854.13760.31620922.42880-0.278802.269301.60870K562EIF2S2
STXBP1ENSG00000136854.13632.06030935.99630-0.566405.659804.49040K562EIF4A3
STXBP1ENSG00000136854.131404.016101683.07490-0.261502.506401.60960K562EIF4G2
STXBP1ENSG00000136854.131537.365701077.590200.512606.269204.32700K562EXOSC5
STXBP1ENSG00000136854.13878.038201105.31210-0.332102.394101.60590K562FIP1L1
STXBP1ENSG00000136854.13470.18210684.13780-0.541103.207402.43740K562G3BP2
STXBP1ENSG00000136854.13849.040101069.01600-0.332402.724101.65950K562HNRNPA1
STXBP1ENSG00000136854.131132.04450938.704400.270101.803601.30900K562HNRNPC
STXBP1ENSG00000136854.13549.63640838.62550-0.609505.143403.41140K562HNRNPK
STXBP1ENSG00000136854.131191.672901498.59650-0.330602.579101.80880K562HSPD1
STXBP1ENSG00000136854.131813.225201386.822600.386707.641006.48560K562NSUN2
STXBP1ENSG00000136854.131095.32690862.673200.344402.957801.56040K562PCBP1
STXBP1ENSG00000136854.131869.549901370.686000.447703.702602.73840K562PCBP3
STXBP1ENSG00000136854.131357.323001051.318000.368503.474202.57050K562POLR2G
STXBP1ENSG00000136854.13509.28650679.79200-0.416602.594001.86790K562PRPF8
STXBP1ENSG00000136854.131483.121901953.16450-0.397204.500803.11210K562PUM1
STXBP1ENSG00000136854.13609.67680768.19150-0.333402.317801.41510K562RCC2
STXBP1ENSG00000136854.13315.92700581.66910-0.880606.071203.84210K562SERBP1
STXBP1ENSG00000136854.13550.99070711.20880-0.368202.963302.07750K562SF3B4
STXBP1ENSG00000136854.13605.300201401.89340-1.2117042.6205039.83170K562SRPK2
STXBP1ENSG00000136854.131269.06100840.546700.594307.627806.46120K562SRSF1
STXBP1ENSG00000136854.131562.998201106.558700.498107.906805.93360K562SRSF7
STXBP1ENSG00000136854.131111.910101450.26890-0.383303.093701.64560K562SSRP1
STXBP1ENSG00000136854.132080.642101602.265500.376804.729702.81800K562SUCLG1
STXBP1ENSG00000136854.13872.671301054.56140-0.273102.035301.33090K562SYNCRIP
STXBP1ENSG00000136854.131072.44210809.543100.405602.756701.82210K562TIAL1
STXBP1ENSG00000136854.131159.37650860.314300.430303.064902.05890K562TRIM56
STXBP1ENSG00000136854.13351.06120662.95600-0.917208.731806.61260K562U2AF1
STXBP1ENSG00000136854.13314.25130684.75330-1.1237017.9350015.83200K562U2AF2
STXBP1ENSG00000136854.13977.25740696.563600.488403.856002.63600K562UCHL5
STXBP1ENSG00000136854.131690.380701470.472500.201001.916901.31090K562UPF1
STXBP1ENSG00000136854.13677.792801134.70960-0.7434010.899107.99800K562UPF2
STXBP1ENSG00000136854.131644.554301258.244900.386203.904602.85810K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for STXBP1 is not available on ENCORE database.





1 RBPs can affect the splicing of STXBP1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSSTXBP1ENSG00000136854.13chr9+1304321551304322371304321761304322371304303581304304660.072000.010240.05394longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for STXBP1 is not avaliable on ENCORE database.