SOX12

General Information

Gene Name       : SOX12
Gene ID             : ENSG00000177732.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SOX12)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SOX12ENSG00000177732.80.932.211.57ENCSR000AEF
HepG2SOX12ENSG00000177732.829.5915.7022.64ENCSR985KAT
K562SOX12ENSG00000177732.85.324.524.92ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SOX12 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SOX12 RNA is bound by 24 proteins.  







eCLIP assay for SOX12 is not avaliable on ENCORE database.





24 proteins are bound to SOX12 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr20309183309233+3'-UTR3.672489.11908HepG2DDX55
chr20310164310238+3'-UTR3.907353.69311HepG2CSTF2
chr20308915308993+3'-UTR3.8022514.94443HepG2PCBP2
chr20309283309304+3'-UTR3.010246.09219HepG2UPF1
chr20307999308034+3'-UTR3.963624.82552K562UPF1
chr20308010308048+3'-UTR4.7298222.51457HepG2AKAP1
chr20309017309108+3'-UTR3.4172612.12867HepG2IGF2BP1
chr20308388308413+3'-UTR3.553914.24288K562UPF1
chr20307988308010+3'-UTR5.5583120.40376HepG2AKAP1
chr20307602307654+3'-UTR3.5888315.08627HepG2PCBP2
chr20307654307703+3'-UTR4.4610120.20792HepG2PCBP2
chr20309233309314+3'-UTR3.1518115.39360HepG2DDX55
chr20307584307668+3'-UTR3.179205.31600HepG2IGF2BP3
chr20307922307988+3'-UTR3.791829.54271HepG2AKAP1
chr20309386309447+3'-UTR4.051693.88068HepG2CSTF2
chr20307984308050+3'-UTR7.3903836.18746HepG2UPF1
chr20308971309001+3'-UTR3.802665.48330K562UPF1
chr20307871307884+3'-UTR3.9889013.00879HepG2PCBP2
chr20307992308049+3'-UTR3.377047.01627HepG2XRN2
chr20308084308168+3'-UTR3.277434.02206K562CSTF2T
chr20307703307770+3'-UTR5.3122954.77299HepG2PCBP2
chr20308950309008+3'-UTR3.022963.69321HepG2IGF2BP3
chr20307577307620+3'-UTR4.0768411.62292HepG2UPF1
chr20308071308111+3'-UTR4.400147.16241HepG2PCBP1
chr20308050308125+3'-UTR4.3562120.18077HepG2AKAP1
chr20307991308041+3'-UTR4.044653.79142K562AKAP1
chr20307709307793+3'-UTR4.9235045.41716HepG2DDX59
chr20307807307825+3'-UTR5.9094223.57293HepG2PCBP2
chr20308068308121+3'-UTR5.399906.86827K562AKAP1
chr20307843307871+3'-UTR4.5719716.91328HepG2PCBP2
chr20308705308770+3'-UTR5.171148.05720K562UPF1
chr20308500308545+3'-UTR4.9710913.56429HepG2UPF1
chr20309190309312+3'-UTR3.433056.64396HepG2PABPN1
chr20308159308202+3'-UTR4.491917.49447K562UPF1
chr20308931308998+3'-UTR4.2818920.43691HepG2DDX59
chr20308466308503+3'-UTR4.030925.99105K562UPF1
chr20307734307779+3'-UTR3.121446.58354HepG2UPF1
chr20308116308159+3'-UTR3.828898.04798K562UPF1
chr20307793307926+3'-UTR4.4511542.50994HepG2DDX59
chr20309258309336+3'-UTR4.045376.74636K562UPF1
chr20307821307862+3'-UTR4.3888520.32435HepG2UPF1
chr20309118309152+3'-UTR3.714133.55864HepG2IGF2BP3
chr20307862307970+3'-UTR5.3819441.36508HepG2UPF1
chr20308651308690+3'-UTR3.305998.43538HepG2DDX59
chr20307770307807+3'-UTR5.0216838.22638HepG2PCBP2
chr20307734307795+3'-UTR3.942128.46839HepG2AKAP1
chr20308290308345+3'-UTR4.329734.62953HepG2IGF2BP3
chr20308943308990+3'-UTR3.9070113.26890HepG2UPF1
chr20308000308037+3'-UTR3.513756.04640HepG2RBM15
chr20307825307843+3'-UTR5.3105822.58306HepG2PCBP2
chr20307503307551+3'-UTR,CDS3.792237.07978HepG2RBM15
chr20309233309306+3'-UTR3.768833.21664HepG2UCHL5
chr20309222309342+3'-UTR4.3758014.80101K562PABPC4
chr20308149308214+3'-UTR3.4818914.90236HepG2DDX59
chr20308922308998+3'-UTR3.426133.32115K562AKAP1
chr20307631307676+3'-UTR4.2482513.34347HepG2DDX59
chr20307842307902+3'-UTR4.8385816.21468HepG2PCBP1
chr20308919308991+3'-UTR4.7240212.68573HepG2AKAP1
chr20308050308140+3'-UTR7.1096765.69236HepG2UPF1
chr20307742307797+3'-UTR4.331545.04359K562HNRNPK
chr20308160308215+3'-UTR4.4198914.04531HepG2UPF1
chr20307502307549+3'-UTR,CDS3.199993.20367K562RBM15
chr20308234308330+3'-UTR3.311518.77718K562UPF1
chr20308545308564+3'-UTR3.596256.40673HepG2DDX59
chr20307876307922+3'-UTR3.597739.59941HepG2AKAP1
chr20307884307944+3'-UTR3.207018.73563HepG2PCBP2
chr20306561306662+5'-UTR,CDS5.7938129.41466HepG2UPF1
chr20306423306481+5'-UTR,intron-Proximal3.2367817.55294HepG2DDX3X
chr20306559306627+5'-UTR,CDS3.311444.08283K562DDX3X
chr20306398306431+5'-UTR,intron-Proximal3.210775.59027HepG2UPF1
chr20306563306682+5'-UTR,CDS4.2188552.42143HepG2DDX3X
chr20306324306371+5'-UTR4.2869722.08153HepG2DDX3X
chr20306443306491+5'-UTR,intron-Proximal4.0748812.32151HepG2UPF1
chr20306511306563+5'-UTR4.4010818.20963HepG2DDX3X
chr20306238306305+5'-UTR4.995374.97000K562DDX3X
chr20306379306408+5'-UTR,intron-Proximal4.641794.60331HepG2FTO
chr20306211306280+5'-UTR3.054725.50895HepG2NCBP2
chr20306223306280+5'-UTR4.4511345.47426HepG2DDX3X
chr20307125307237+CDS3.8985211.93416HepG2FTO
chr20306974307048+CDS3.480836.53248HepG2FTO
chr20307329307388+CDS4.1558810.20505K562RBM15
chr20307164307238+CDS3.132704.38893K562ZNF800
chr20307026307081+CDS3.581587.67527HepG2SLTM
chr20306651306694+CDS3.423583.80897HepG2FXR2
chr20307060307185+CDS4.681927.33217K562PUM1
chr20307030307085+CDS3.816065.71420K562RBM15
chr20307144307215+CDS3.6502913.48932HepG2UPF1
chr20307026307080+CDS3.6062112.18450HepG2RBM15
chr20306578306643+CDS3.372966.82611HepG2FTO
chr20307322307398+CDS6.3743514.35102HepG2RBM15
chr20306647306699+CDS3.139663.22540HepG2G3BP1
chr20306864306962+CDS4.4009610.49350HepG2ZNF800
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SOX12 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SOX12 is not available on ENCORE database.

  • 97 RBPs can affect the levels of SOX12.  








The Knockdown/knockout RNA-Seq assay for SOX12 is not available on ENCORE database.





97 RBPs can affect the gene expression of SOX12 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SOX12ENSG00000177732.61507.726402167.58420-0.5237012.4689011.37770HepG2ACO1
SOX12ENSG00000177732.61881.26480905.085401.055507.148005.63840HepG2ADAR
SOX12ENSG00000177732.61169.401102233.40340-0.933503.498402.90880HepG2AKAP1
SOX12ENSG00000177732.62256.045202584.77570-0.196202.060001.45110HepG2AUH
SOX12ENSG00000177732.61153.229802605.41160-1.1758028.0198026.44610HepG2BOP1
SOX12ENSG00000177732.6976.777601974.93300-1.0157010.165208.82590HepG2CALR
SOX12ENSG00000177732.62438.257201755.565000.473802.366701.64670HepG2CIRBP
SOX12ENSG00000177732.61899.123302167.17290-0.190502.369101.74580HepG2CKAP4
SOX12ENSG00000177732.61163.41330928.162900.325802.614901.62630HepG2YBX3
SOX12ENSG00000177732.6624.892601113.66720-0.833602.814201.44300HepG2CSTF2T
SOX12ENSG00000177732.61445.689901685.70280-0.221601.926401.37140HepG2CELF1
SOX12ENSG00000177732.62288.901002004.732300.191102.349301.57610HepG2DDX19B
SOX12ENSG00000177732.61558.808702716.14030-0.801105.508004.14350HepG2DDX59
SOX12ENSG00000177732.61321.70970911.361100.536204.542603.65880HepG2DNAJC21
SOX12ENSG00000177732.61367.62410903.350200.5982013.4376012.10930HepG2DNAJC2
SOX12ENSG00000177732.6609.026801103.90610-0.858003.305002.08500HepG2AGO1
SOX12ENSG00000177732.61365.049201788.16100-0.389504.313403.31230HepG2EIF4G1
SOX12ENSG00000177732.62227.472603200.73040-0.523004.990303.98410HepG2FIP1L1
SOX12ENSG00000177732.61408.506701808.09000-0.360303.629002.73570HepG2FUBP3
SOX12ENSG00000177732.61237.11680819.624700.593804.104602.41370HepG2HNRNPA0
SOX12ENSG00000177732.62070.61360920.092601.170108.519307.47630HepG2HNRNPA1
SOX12ENSG00000177732.61282.707901665.69180-0.376904.987403.79240HepG2HNRNPA2B1
SOX12ENSG00000177732.62231.211901694.401800.397006.406105.37700HepG2HNRNPF
SOX12ENSG00000177732.62004.281301650.843400.279804.676203.81690HepG2HNRNPL
SOX12ENSG00000177732.61361.673401016.677800.421406.446305.55290HepG2HNRNPU
SOX12ENSG00000177732.62322.104801668.493900.476806.573205.49950HepG2IGF2BP1
SOX12ENSG00000177732.61572.227001038.500600.5982015.1935013.63400HepG2ILF2
SOX12ENSG00000177732.61338.10180923.521600.534903.896002.43880HepG2KHDRBS1
SOX12ENSG00000177732.61889.659602589.74730-0.454706.125604.96430HepG2MSI2
SOX12ENSG00000177732.62222.668301046.548201.086604.663702.82390HepG2NOLC1
SOX12ENSG00000177732.62972.276902294.296800.373403.466502.62780HepG2NSUN2
SOX12ENSG00000177732.61283.60320933.269700.459702.581801.39640HepG2PKM
SOX12ENSG00000177732.61963.14100906.793201.1142035.3946033.03150HepG2PPIL4
SOX12ENSG00000177732.61344.546201940.52110-0.5293010.450109.08700HepG2PRPF4
SOX12ENSG00000177732.6560.88110918.05130-0.710902.222001.49550HepG2PRPF8
SOX12ENSG00000177732.61489.647401893.34990-0.346004.341503.68950HepG2PTBP1
SOX12ENSG00000177732.6375.863401135.13770-1.594603.244502.48410HepG2RAVER1
SOX12ENSG00000177732.63038.759003701.68130-0.284703.194702.28060HepG2RBM15
SOX12ENSG00000177732.61697.926902480.49370-0.5469010.841709.96370HepG2RBM22
SOX12ENSG00000177732.61770.457701270.239300.478903.737402.57520HepG2RBM27
SOX12ENSG00000177732.61601.992201031.495700.635005.514604.00690HepG2RCC2
SOX12ENSG00000177732.62618.932202107.017400.313704.251303.60650HepG2NELFE
SOX12ENSG00000177732.62436.068401962.580400.311703.023602.38270HepG2RECQL
SOX12ENSG00000177732.61483.75190973.183700.608404.539203.51640HepG2RPS3A
SOX12ENSG00000177732.6505.22440908.05810-0.845902.622501.85450HepG2RRP9
SOX12ENSG00000177732.61572.07330905.389300.7960022.4046020.82000HepG2SAFB2
SOX12ENSG00000177732.61330.30670916.407400.537603.861802.32170HepG2SART3
SOX12ENSG00000177732.61494.431301971.00750-0.399304.893204.14220HepG2SF3B4
SOX12ENSG00000177732.62184.601701645.098500.409106.901605.87460HepG2SLBP
SOX12ENSG00000177732.61443.139901055.824800.450708.480207.45250HepG2SMN1
SOX12ENSG00000177732.61853.481002849.44450-0.620404.416203.41910HepG2SNRNP70
SOX12ENSG00000177732.61995.914902801.58400-0.4892012.5453011.68320HepG2SRFBP1
SOX12ENSG00000177732.61728.251502057.39250-0.251502.709302.24010HepG2SRSF1
SOX12ENSG00000177732.61287.927701673.87370-0.378105.021804.31900HepG2SRSF9
SOX12ENSG00000177732.62918.163202432.364200.262603.804503.22450HepG2SSB
SOX12ENSG00000177732.61362.24800846.742400.685905.860304.20520HepG2STIP1
SOX12ENSG00000177732.61251.273001849.50720-0.563705.443704.70220HepG2TAF15
SOX12ENSG00000177732.61387.238301699.18780-0.292602.510601.71150HepG2TIA1
SOX12ENSG00000177732.61304.15930987.846600.400704.160603.57460HepG2TIAL1
SOX12ENSG00000177732.61394.81930996.726400.484708.033007.15060HepG2TRIM56
SOX12ENSG00000177732.62350.623701676.146000.487804.911303.71360HepG2TUFM
SOX12ENSG00000177732.61764.254202737.60980-0.633908.640807.52480HepG2U2AF1
SOX12ENSG00000177732.63591.794902929.461100.294004.184803.47230HepG2UTP3
SOX12ENSG00000177732.61337.41600871.712300.617404.549003.12920HepG2XPO5
SOX12ENSG00000177732.62284.605701167.071700.969006.324105.24330HepG2XRN2
SOX12ENSG00000177732.62017.655803337.10890-0.7259032.4836031.14090HepG2ZNF622
SOX12ENSG00000177732.6948.24720728.794300.379702.813101.56460K562APOBEC3C
SOX12ENSG00000177732.6418.08800315.195200.407502.551701.63270K562BCLAF1
SOX12ENSG00000177732.6682.71500397.564600.780008.202506.12490K562CCAR1
SOX12ENSG00000177732.61084.36260871.643300.314902.811101.69670K562CPEB4
SOX12ENSG00000177732.6908.69200724.592400.326502.641101.46120K562DDX21
SOX12ENSG00000177732.61469.97930902.142700.7043014.9655013.56630K562DDX47
SOX12ENSG00000177732.6649.69070445.121100.545503.305301.83980K562DHX30
SOX12ENSG00000177732.6862.25020657.071800.392003.886003.05610K562EIF2S2
SOX12ENSG00000177732.6687.22680404.372500.765002.250201.35450K562EIF3A
SOX12ENSG00000177732.6291.82110182.447800.677504.421903.42580K562EIF3G
SOX12ENSG00000177732.61220.65730825.951100.563407.690206.13740K562EIF4G2
SOX12ENSG00000177732.6806.17960584.370100.464103.571602.59850K562FIP1L1
SOX12ENSG00000177732.6500.34400334.682600.580005.108704.32130K562FXR1
SOX12ENSG00000177732.664.06060136.51620-1.091604.329503.40160K562G3BP2
SOX12ENSG00000177732.61188.64180875.658800.440804.213103.28360K562GRSF1
SOX12ENSG00000177732.6633.77100480.625200.398902.122001.31320K562HNRNPM
SOX12ENSG00000177732.6787.11720586.930300.423303.497502.49460K562HNRNPU
SOX12ENSG00000177732.6363.85640238.226700.610904.228802.68630K562IGF2BP3
SOX12ENSG00000177732.6529.03950713.18130-0.430902.718901.90190K562KIF1C
SOX12ENSG00000177732.6414.02140246.121300.750206.390105.08820K562MAGOH
SOX12ENSG00000177732.6384.98140245.614700.648304.920403.64820K562MATR3
SOX12ENSG00000177732.6291.06370529.85570-0.864303.693202.50300K562PABPN1
SOX12ENSG00000177732.6855.85090663.335900.367502.381501.62240K562PPIG
SOX12ENSG00000177732.6379.66310239.125800.666805.202504.31560K562PTBP1
SOX12ENSG00000177732.6295.15260666.47710-1.1751013.6355012.47560K562PUS1
SOX12ENSG00000177732.6490.65530649.35470-0.404303.124702.50030K562RBM15
SOX12ENSG00000177732.6308.43800229.267100.427902.069701.34790K562RBM22
SOX12ENSG00000177732.6335.07020241.273000.473702.453301.43490K562NELFE
SOX12ENSG00000177732.6390.71770249.500500.647003.498402.36100K562RPS3
SOX12ENSG00000177732.6678.55950458.381900.565803.067401.92680K562SAFB
SOX12ENSG00000177732.6281.69000484.71650-0.783002.525701.39750K562SF1
SOX12ENSG00000177732.6326.36550556.43410-0.769702.897601.62980K562SNRNP200
SOX12ENSG00000177732.6436.74330299.402600.544603.410602.24300K562SRFBP1
SOX12ENSG00000177732.6426.54940234.428400.863503.659302.85230K562SRSF1
SOX12ENSG00000177732.6406.47100240.842300.755005.364103.80880K562SRSF4
SOX12ENSG00000177732.6648.83970515.956200.330502.187101.45650K562SYNCRIP
SOX12ENSG00000177732.6394.63310237.245300.734005.325304.32590K562TARDBP
SOX12ENSG00000177732.6383.04950228.852900.743005.797204.54620K562TIA1
SOX12ENSG00000177732.6330.35020224.600000.556503.060501.90340K562TRA2A
SOX12ENSG00000177732.6526.08170353.723300.572604.331603.08650K562TRIM56
SOX12ENSG00000177732.6975.55860813.441800.262102.443301.64540K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SOX12 is not available on ENCORE database.






No RBPs affect the alternative splcing events of SOX12 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for SOX12 is not avaliable on ENCORE database.