SNX33

General Information

Gene Name       : SNX33
Gene ID             : ENSG00000173548.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SNX33)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SNX33ENSG00000173548.80.250.400.33ENCSR000AEF
HepG2SNX33ENSG00000173548.810.486.228.35ENCSR985KAT
K562SNX33ENSG00000173548.87.336.767.04ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SNX33 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SNX33 RNA is bound by 9 proteins.  







eCLIP assay for SNX33 is not avaliable on ENCORE database.





9 proteins are bound to SNX33 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr157594986975949908+3'-UTR3.765664.82552K562UPF1
chr157595077875950878+3'-UTR3.167936.48920K562UPF1
chr157595278875952874+3'-UTR4.5053621.34040HepG2HNRNPL
chr157595300875953131+3'-UTR3.807036.74745K562AGGF1
chr157595287275952984+3'-UTR4.3379410.03443K562HNRNPL
chr157595047375950524+3'-UTR3.922395.24353K562UPF1
chr157594987575949938+3'-UTR4.462544.20997HepG2UPF1
chr157595297875953030+3'-UTR4.5443621.88402HepG2HNRNPL
chr157595303075953070+3'-UTR3.9949513.36543HepG2HNRNPL
chr157595003775950100+3'-UTR5.355769.20661K562UPF1
chr157595087875950944+3'-UTR4.487288.85840K562UPF1
chr157595040175950458+3'-UTR3.589455.17218HepG2UPF1
chr157594971475949846+3'-UTR5.220977.98718HepG2UPF1
chr157595056275950592+3'-UTR4.802666.29854K562UPF1
chr157595041675950473+3'-UTR3.168736.06342K562UPF1
chr157595010075950167+3'-UTR5.308648.00788K562UPF1
chr157595336875953449+3'-UTR5.324047.42650HepG2XPO5
chr157595288875952966+3'-UTR3.043596.67258K562AGGF1
chr157595280575952857+3'-UTR3.727184.38327K562AGGF1
chr157594049375940564+5'-UTR3.938924.94100K562FTO
chr157594065975940728+5'-UTR4.5414811.03866HepG2DDX3X
chr157594928475949306+CDS,intron-Proximal3.217303.09962HepG2BUD13
chr157594282975942910+CDS,intron-Proximal3.234813.85127HepG2GRWD1
chr157594930675949335+CDS3.285064.40435HepG2BUD13
chr157594436275944409+intron-Distal4.343323.42734K562PTBP1
chr157594435975944408+intron-Distal3.905236.51598HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SNX33 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SNX33 is not available on ENCORE database.

  • 107 RBPs can affect the levels of SNX33.  








The Knockdown/knockout RNA-Seq assay for SNX33 is not available on ENCORE database.





107 RBPs can affect the gene expression of SNX33 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SNX33ENSG00000173548.81090.007301655.70300-0.603102.473201.58170HepG2ABCF1
SNX33ENSG00000173548.81330.435301763.01680-0.406102.377601.80690HepG2ACO1
SNX33ENSG00000173548.8870.294002980.74240-1.7761040.6667038.96870HepG2AKAP1
SNX33ENSG00000173548.81326.892401770.94250-0.416502.553101.81340HepG2AKAP8L
SNX33ENSG00000173548.81583.779402466.20000-0.638907.533306.26670HepG2ASCC1
SNX33ENSG00000173548.82805.086201553.476900.8524029.6616027.83380HepG2AUH
SNX33ENSG00000173548.81296.11130792.602400.709406.680305.34980HepG2BCLAF1
SNX33ENSG00000173548.81068.54170742.649200.524803.337102.68660HepG2BOP1
SNX33ENSG00000173548.81313.04320953.838400.461005.322604.29620HepG2CALR
SNX33ENSG00000173548.81365.183102343.09670-0.7793011.093009.64380HepG2CIRBP
SNX33ENSG00000173548.81280.598601762.20380-0.460603.338702.62020HepG2CKAP4
SNX33ENSG00000173548.81268.29530681.756900.895508.418607.27400HepG2CPSF6
SNX33ENSG00000173548.8394.68630563.40680-0.513503.651702.42930HepG2CSTF2
SNX33ENSG00000173548.82580.006701415.027100.8664036.8017034.71510HepG2DAZAP1
SNX33ENSG00000173548.81155.046001630.34030-0.497203.629702.69250HepG2DDX19B
SNX33ENSG00000173548.81574.603602855.08090-0.8585012.6725011.42400HepG2DDX3X
SNX33ENSG00000173548.81313.85410774.196800.762903.253702.19600HepG2DDX59
SNX33ENSG00000173548.81766.062601419.623100.314902.389001.44640HepG2DDX5
SNX33ENSG00000173548.81582.47520856.172400.8861015.2045013.20260HepG2DHX30
SNX33ENSG00000173548.81279.09280887.685500.526907.778106.64780HepG2DNAJC21
SNX33ENSG00000173548.8708.783801051.56680-0.569104.922403.72410HepG2EEF2
SNX33ENSG00000173548.8925.844601255.50260-0.439403.411302.10880HepG2EIF2S2
SNX33ENSG00000173548.8635.31700996.52270-0.649407.970306.31580HepG2EIF3G
SNX33ENSG00000173548.81145.053802537.11400-1.1478014.7306013.21810HepG2EIF4B
SNX33ENSG00000173548.82475.437801337.280100.888305.893104.72420HepG2EIF4G2
SNX33ENSG00000173548.81366.231901783.53780-0.384505.655104.84570HepG2ETF1
SNX33ENSG00000173548.81247.766301722.40080-0.465102.530801.73170HepG2EWSR1
SNX33ENSG00000173548.81400.608301856.93070-0.406904.319103.34870HepG2FUBP3
SNX33ENSG00000173548.8707.299901143.26570-0.692805.072503.58650HepG2FUS
SNX33ENSG00000173548.81523.232102629.43510-0.7876011.182809.88530HepG2FXR1
SNX33ENSG00000173548.81729.203802438.74600-0.496004.459903.62330HepG2G3BP1
SNX33ENSG00000173548.81950.190902589.61720-0.409103.670302.63620HepG2G3BP2
SNX33ENSG00000173548.8534.42550760.04520-0.508103.917502.83850HepG2GEMIN5
SNX33ENSG00000173548.81357.06460772.727000.812408.882107.77830HepG2GPKOW
SNX33ENSG00000173548.81509.65740931.584600.6964014.6434013.16480HepG2HNRNPF
SNX33ENSG00000173548.81356.016602470.47990-0.8654014.8342013.34100HepG2HNRNPK
SNX33ENSG00000173548.82010.62290737.436501.4470023.0927021.55690HepG2HNRNPLL
SNX33ENSG00000173548.8646.101901153.04330-0.835606.360704.99910HepG2HNRNPM
SNX33ENSG00000173548.8654.89700990.25540-0.596509.369308.30360HepG2HNRNPU
SNX33ENSG00000173548.81550.53000917.338300.7571012.7970011.35700HepG2IGF2BP1
SNX33ENSG00000173548.83629.139902478.775300.549906.111005.14480HepG2IGF2BP2
SNX33ENSG00000173548.81298.984802326.85490-0.841003.241502.17480HepG2IGF2BP3
SNX33ENSG00000173548.81545.229502493.51750-0.690406.468604.86700HepG2KHSRP
SNX33ENSG00000173548.8755.453101030.36250-0.447703.974602.60850HepG2LARP7
SNX33ENSG00000173548.8830.673201081.77120-0.381002.980101.71890HepG2LIN28B
SNX33ENSG00000173548.8565.65990872.40720-0.625105.767503.49900HepG2MARK2
SNX33ENSG00000173548.8859.791702644.94240-1.6212035.2276033.17970HepG2MATR3
SNX33ENSG00000173548.8641.41320893.39570-0.478002.367601.39140HepG2METAP2
SNX33ENSG00000173548.8996.192801352.38850-0.441003.456702.55330HepG2MSI2
SNX33ENSG00000173548.81110.53680752.302400.561803.241102.18620HepG2MTPAP
SNX33ENSG00000173548.81197.712402707.13480-1.1765021.3609019.70510HepG2NCBP2
SNX33ENSG00000173548.81208.18380653.949200.885509.722008.38230HepG2NSUN2
SNX33ENSG00000173548.8426.01220638.14060-0.583002.982601.33610HepG2PA2G4
SNX33ENSG00000173548.8715.99060980.18260-0.453102.743801.89920HepG2PARN
SNX33ENSG00000173548.81987.323302389.86460-0.266103.550802.88190HepG2PCBP1
SNX33ENSG00000173548.8710.668501082.18860-0.606703.833002.61650HepG2PCBP2
SNX33ENSG00000173548.8508.68790705.93240-0.472704.158802.64100HepG2PKM
SNX33ENSG00000173548.8812.526101137.57390-0.485502.589701.40500HepG2PRPF6
SNX33ENSG00000173548.8454.55640691.77930-0.605904.679003.65860HepG2PRPF8
SNX33ENSG00000173548.8731.266601175.57350-0.684903.498101.50400HepG2PSIP1
SNX33ENSG00000173548.81547.607802431.81110-0.6520017.0858015.94850HepG2PTBP1
SNX33ENSG00000173548.81700.299001339.413500.344102.330501.77700HepG2PUF60
SNX33ENSG00000173548.81224.589101421.84200-0.215502.386501.82770HepG2PUM1
SNX33ENSG00000173548.81181.823501420.80620-0.265702.194201.59420HepG2PUM2
SNX33ENSG00000173548.81835.901302633.63790-0.520608.996007.96660HepG2QKI
SNX33ENSG00000173548.82431.413902055.103000.242502.246201.46320HepG2RBM15
SNX33ENSG00000173548.8878.837901242.46240-0.499504.509503.22460HepG2RBM27
SNX33ENSG00000173548.81161.387302706.34360-1.2205053.2069051.54000HepG2NELFE
SNX33ENSG00000173548.81088.970202520.64330-1.2108052.4231050.44770HepG2RECQL
SNX33ENSG00000173548.81430.512201003.643500.511204.993904.11200HepG2RPLP0
SNX33ENSG00000173548.8502.61730830.63060-0.724708.539207.53000HepG2RPS19
SNX33ENSG00000173548.8797.596901145.85800-0.522704.851903.81030HepG2RPS2
SNX33ENSG00000173548.8867.561901169.69560-0.431103.579802.35070HepG2RPS5
SNX33ENSG00000173548.81301.83230881.865900.5618010.773309.63140HepG2SAFB2
SNX33ENSG00000173548.81118.778302399.21940-1.1006014.0873012.49900HepG2SF3A3
SNX33ENSG00000173548.81594.013802531.76730-0.6675017.8847016.58260HepG2SF3B4
SNX33ENSG00000173548.81683.471601284.279400.390406.906205.87890HepG2SLBP
SNX33ENSG00000173548.8772.754001028.40410-0.412305.796304.91980HepG2SMN1
SNX33ENSG00000173548.81996.982301683.736600.246103.150302.62770HepG2SRFBP1
SNX33ENSG00000173548.8976.340602642.64220-1.4365076.0401074.34190HepG2SRSF1
SNX33ENSG00000173548.81526.02440915.273900.7374016.4774015.02590HepG2SRSF7
SNX33ENSG00000173548.82349.647101461.921600.6845020.0377018.93220HepG2SSB
SNX33ENSG00000173548.81994.128202609.86880-0.388202.898901.58560HepG2SSRP1
SNX33ENSG00000173548.81154.073701504.01770-0.382106.071005.21470HepG2SUCLG1
SNX33ENSG00000173548.81958.184602641.66640-0.431902.938101.56960HepG2SUGP2
SNX33ENSG00000173548.81746.518101128.317300.630206.397305.00430HepG2SUPT6H
SNX33ENSG00000173548.81189.177602375.38000-0.9982030.3930028.80200HepG2TAF15
SNX33ENSG00000173548.81016.39640719.030700.499203.281402.49910HepG2TARDBP
SNX33ENSG00000173548.81427.481502563.45720-0.844604.776403.40440HepG2TBRG4
SNX33ENSG00000173548.81300.23790970.819800.421403.061502.47530HepG2TRIM56
SNX33ENSG00000173548.81100.243901429.71320-0.377902.558101.95180HepG2U2AF1
SNX33ENSG00000173548.81471.277802186.99890-0.5719012.0557010.07350HepG2UTP18
SNX33ENSG00000173548.81423.819202054.24830-0.5288011.4256010.34070HepG2UTP3
SNX33ENSG00000173548.8667.442401148.46470-0.783006.308704.75570HepG2XRCC6
SNX33ENSG00000173548.81650.085802340.10660-0.5040013.9318012.93980HepG2ZNF622
SNX33ENSG00000173548.81180.31500931.044700.342103.606402.97380K562AGGF1
SNX33ENSG00000173548.8797.50150535.130000.575504.692003.54490K562BOP1
SNX33ENSG00000173548.81340.537001097.092200.289002.917601.77780K562CPEB4
SNX33ENSG00000173548.8801.70680568.980200.494604.473803.47760K562CPSF6
SNX33ENSG00000173548.81252.11490867.740500.528907.720406.60820K562EIF2S2
SNX33ENSG00000173548.8434.46130623.88360-0.522003.439402.16430K562FKBP4
SNX33ENSG00000173548.8997.87700578.955800.785309.221907.61080K562FMR1
SNX33ENSG00000173548.8666.46810490.731100.441502.792801.87400K562FTO
SNX33ENSG00000173548.8575.19840808.30130-0.490805.283204.48450K562FXR1
SNX33ENSG00000173548.8214.07040469.96100-1.134509.523208.05810K562G3BP2
SNX33ENSG00000173548.8803.04960543.222900.563805.119704.04550K562GPKOW
SNX33ENSG00000173548.8467.02280676.65990-0.534903.867902.37880K562HNRNPK
SNX33ENSG00000173548.8436.11080604.61810-0.471302.175801.35440K562HNRNPM
SNX33ENSG00000173548.8966.930501177.48540-0.284202.495101.64600K562HNRNPU
SNX33ENSG00000173548.8912.73340678.033700.428702.579801.59950K562IGF2BP2
SNX33ENSG00000173548.8657.27130463.879200.502602.676101.76190K562KRR1
SNX33ENSG00000173548.8793.39800530.251800.581305.361504.11640K562METAP2
SNX33ENSG00000173548.81361.929001064.353600.355605.489404.49240K562NSUN2
SNX33ENSG00000173548.8910.066001174.05650-0.367502.380701.61050K562PCBP3
SNX33ENSG00000173548.8699.67930900.53550-0.364102.962502.13290K562POLR2G
SNX33ENSG00000173548.8384.40650677.76900-0.818206.259805.13130K562PRPF8
SNX33ENSG00000173548.81204.060601646.29580-0.451304.518403.48080K562PUF60
SNX33ENSG00000173548.8534.49540690.21450-0.368902.046301.34950K562RPS19
SNX33ENSG00000173548.8389.65760579.82900-0.573403.058801.40440K562SERBP1
SNX33ENSG00000173548.81554.970801050.192200.566109.407507.97090K562SF3A3
SNX33ENSG00000173548.8605.35690903.26870-0.577406.550405.27850K562SYNCRIP
SNX33ENSG00000173548.8354.80940470.40860-0.406902.636901.85180K562U2AF2
SNX33ENSG00000173548.81535.813101128.553800.444407.113306.02270K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SNX33 is not available on ENCORE database.






No RBPs affect the alternative splcing events of SNX33 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for SNX33 is not avaliable on ENCORE database.