SLC44A5

General Information

Gene Name       : SLC44A5
Gene ID             : ENSG00000137968.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SLC44A5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC44A5ENSG00000137968.160.020.000.01ENCSR000AEF
HepG2SLC44A5ENSG00000137968.164.679.066.87ENCSR985KAT
K562SLC44A5ENSG00000137968.162.332.412.37ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC44A5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SLC44A5 RNA is bound by 16 proteins.  







eCLIP assay for SLC44A5 is not avaliable on ENCORE database.





16 proteins are bound to SLC44A5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr17567214175672248-3'-UTR,intron-Distal4.299446.89679HepG2KHSRP
chr17576629475766321-3'-UTR,CDS,intron-Distal,intron-Proximal3.120224.09741HepG2PPIG
chr17571689175716980-3'-UTR,CDS,intron-Distal,intron-Proximal4.350446.83823K562DDX24
chr17567215175672267-3'-UTR,intron-Distal4.4741910.93437K562KHSRP
chr17576629675766299-3'-UTR,CDS,intron-Distal,intron-Proximal3.144657.43909HepG2BCLAF1
chr17567138075671471-3'-UTR,intron-Distal3.366074.10408K562KHSRP
chr17570860775708658-3'-UTR,CDS,intron-Distal4.549088.41475HepG2BCLAF1
chr17567228675672433-3'-UTR,CDS,intron-Distal4.673814.43680K562ZNF622
chr17567147275671537-3'-UTR,intron-Distal6.0793713.56089HepG2U2AF2
chr17567158075671692-3'-UTR,intron-Distal3.562555.56048K562KHSRP
chr17570867375708696-3'-UTR,CDS,intron-Distal4.168165.65086HepG2BCLAF1
chr17566936975669476-3'-UTR,CDS,intron-Distal3.433504.48818HepG2GRWD1
chr17576629975766347-3'-UTR,CDS,intron-Distal3.377019.07205HepG2BCLAF1
chr17571689475716952-3'-UTR,CDS,intron-Distal,intron-Proximal4.7498414.51957HepG2BCLAF1
chr17580526675805298-5'-UTR,CDS,intron-Distal,intron-Proximal3.813177.28307HepG2BCLAF1
chr17580526675805311-5'-UTR,CDS,intron-Distal,intron-Proximal5.062486.46301HepG2PPIG
chr17570274575702755-CDS,intron-Distal5.346597.49561HepG2BCLAF1
chr17570426975704318-CDS,intron-Distal4.484027.82199HepG2BCLAF1
chr17567944975679478-CDS,intron-Distal3.613905.15500HepG2BCLAF1
chr17570267075702714-CDS,intron-Distal,intron-Proximal4.0389216.43154HepG2BCLAF1
chr17569974975699771-CDS,intron-Distal4.859829.30195HepG2BCLAF1
chr17567960375679637-CDS,intron-Distal,intron-Proximal4.321643.16051HepG2PPIG
chr17567934975679435-CDS,intron-Distal,intron-Proximal4.315227.79098HepG2PRPF8
chr17570419775704267-CDS,intron-Distal,intron-Proximal3.026863.23860HepG2PPIG
chr17568499475685028-CDS,intron-Distal3.223045.63425HepG2BCLAF1
chr17568804975688126-CDS,intron-Distal3.026887.10293HepG2BCLAF1
chr17570419675704261-CDS,intron-Distal,intron-Proximal4.8326017.34901HepG2BCLAF1
chr17568804575688095-CDS,intron-Distal,intron-Proximal4.442153.82843HepG2PPIG
chr17574068575740727-CDS,intron-Distal3.1654411.26610HepG2BCLAF1
chr17569977175699783-CDS,intron-Distal4.6028811.99763HepG2BCLAF1
chr17568548475685517-CDS,intron-Distal,intron-Proximal4.097846.22576HepG2BCLAF1
chr17566947375669540-CDS,intron-Distal3.121703.76090HepG2U2AF2
chr17570267175702756-CDS,intron-Distal,intron-Proximal3.622015.14149K562DDX24
chr17567938775679410-CDS,intron-Distal,intron-Proximal5.190617.49561HepG2BCLAF1
chr17569350775693538-CDS,intron-Distal3.257164.34695HepG2BCLAF1
chr17567237475672442-CDS,intron-Distal3.606208.96569HepG2U2AF2
chr17568355075683577-CDS,intron-Distal,intron-Proximal4.105655.79432HepG2BCLAF1
chr17568152575681542-CDS,intron-Distal3.687843.27569HepG2BCLAF1
chr17569341375693458-CDS,intron-Distal4.520799.47159HepG2BCLAF1
chr17574069375740728-CDS,intron-Distal,intron-Proximal3.053984.87174HepG2PPIG
chr17570271475702745-CDS,intron-Distal4.358369.37631HepG2BCLAF1
chr17568417575684189-CDS,intron-Distal3.756604.51739HepG2BCLAF1
chr17607398276074077-intron-Distal3.780733.51804HepG2HNRNPL
chr17605948676059593-intron-Distal5.116737.97897HepG2QKI
chr17605382876053927-intron-Distal5.1177011.26688HepG2PCBP2
chr17604186876041963-intron-Distal3.711803.26015K562PTBP1
chr17604186876041954-intron-Distal4.401098.21761HepG2PTBP1
chr17599287575992968-intron-Distal4.324174.51355HepG2PTBP1
chr17595732875957418-intron-Distal3.762203.08314K562TARDBP
chr17603578476035918-intron-Distal3.097583.79703HepG2SUGP2
chr17567244275672497-intron-Distal5.8676213.12509HepG2U2AF2
chr17605382476053912-intron-Distal4.456685.74273K562ILF3
chr17583819575838298-intron-Distal4.399103.83958HepG2QKI
chr17605948976059578-intron-Distal4.350795.00478HepG2PCBP2
chr17605385076053922-intron-Distal3.792113.09122HepG2PTBP1
chr17607576476075843-intron-Distal3.122283.61097K562ILF3
chr17598617775986273-intron-Distal4.953593.91475K562PTBP1
chr17580713375807222-intron-Distal5.010167.11021HepG2PTBP1
chr17573107175731139-intron-Distal4.163293.50357HepG2QKI
chr17605845476058577-intron-Distal3.368963.68462HepG2MATR3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SLC44A5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC44A5 is not available on ENCORE database.

  • 112 RBPs can affect the levels of SLC44A5.  








The Knockdown/knockout RNA-Seq assay for SLC44A5 is not available on ENCORE database.





112 RBPs can affect the gene expression of SLC44A5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC44A5ENSG00000137968.12412.75180592.24210-0.520904.475303.73850HepG2ACO1
SLC44A5ENSG00000137968.12494.10950673.06440-0.445902.338101.84480HepG2AKAP1
SLC44A5ENSG00000137968.12926.31120595.043700.638409.833608.49520HepG2AKAP8L
SLC44A5ENSG00000137968.121299.94670954.293600.445806.140205.18160HepG2AUH
SLC44A5ENSG00000137968.121104.36600814.529000.439102.541601.61260HepG2CCAR1
SLC44A5ENSG00000137968.12717.76720592.136400.277502.314601.69750HepG2CKAP4
SLC44A5ENSG00000137968.12634.32060415.204100.611304.857803.96780HepG2CPSF6
SLC44A5ENSG00000137968.12683.14190367.922000.8927010.376308.51090HepG2CSTF2
SLC44A5ENSG00000137968.12665.32320937.51450-0.494806.095505.21170HepG2CELF1
SLC44A5ENSG00000137968.12746.53930524.874600.508104.457103.28680HepG2DDX24
SLC44A5ENSG00000137968.12649.14100483.623900.424503.083401.65710HepG2DDX52
SLC44A5ENSG00000137968.12663.12570544.899400.283201.910301.31450HepG2DNAJC21
SLC44A5ENSG00000137968.12384.44400532.43780-0.469802.677202.09420HepG2EIF2S1
SLC44A5ENSG00000137968.121139.15850572.885300.991604.780403.89160HepG2EIF4B
SLC44A5ENSG00000137968.12692.05510469.099600.560904.230302.90770HepG2ESF1
SLC44A5ENSG00000137968.121438.071001095.675200.392205.528004.72750HepG2ETF1
SLC44A5ENSG00000137968.12234.52960546.85520-1.2214011.9962010.55650HepG2FIP1L1
SLC44A5ENSG00000137968.12753.00990415.877500.856403.579702.41850HepG2FTO
SLC44A5ENSG00000137968.12616.18390319.894800.9457011.089109.56210HepG2FUBP3
SLC44A5ENSG00000137968.121151.79170550.719601.0644014.1525012.70760HepG2G3BP1
SLC44A5ENSG00000137968.12818.14980584.635300.484703.464802.46100HepG2G3BP2
SLC44A5ENSG00000137968.12381.21040550.11890-0.529203.645602.91820HepG2HNRNPA1
SLC44A5ENSG00000137968.12575.32960856.69940-0.574403.660001.90350HepG2HNRNPD
SLC44A5ENSG00000137968.12820.73450557.610300.557604.600703.71880HepG2HNRNPK
SLC44A5ENSG00000137968.12393.75240607.83850-0.626407.618406.64990HepG2HNRNPU
SLC44A5ENSG00000137968.12695.32370941.86930-0.437802.599401.45490HepG2KHDRBS1
SLC44A5ENSG00000137968.12894.93470563.051800.668404.833103.47420HepG2KHSRP
SLC44A5ENSG00000137968.12639.44920442.515600.531004.035003.06390HepG2MSI2
SLC44A5ENSG00000137968.12682.28080458.024500.574802.447201.53950HepG2MTPAP
SLC44A5ENSG00000137968.12378.08290611.26240-0.693105.166804.31320HepG2NCBP2
SLC44A5ENSG00000137968.12455.96460652.34650-0.516702.763001.33610HepG2NKRF
SLC44A5ENSG00000137968.12710.84010999.64020-0.491905.690304.60430HepG2NOL12
SLC44A5ENSG00000137968.12364.12010903.83800-1.3116011.583809.73670HepG2PABPC1
SLC44A5ENSG00000137968.12744.03250544.390300.450602.880702.14450HepG2PABPC4
SLC44A5ENSG00000137968.12571.05440886.85960-0.635103.499901.78820HepG2PNPT1
SLC44A5ENSG00000137968.12376.93680542.14750-0.524404.729203.79200HepG2PPIL4
SLC44A5ENSG00000137968.12657.54540451.799500.541303.952303.00760HepG2PRPF8
SLC44A5ENSG00000137968.12950.12310588.960900.6898011.3165010.35690HepG2PTBP1
SLC44A5ENSG00000137968.12762.92920954.22870-0.322801.831301.33290HepG2PUF60
SLC44A5ENSG00000137968.12854.046201012.93800-0.246202.619102.03870HepG2PUM1
SLC44A5ENSG00000137968.12893.06320603.240400.565908.436507.46050HepG2PUS1
SLC44A5ENSG00000137968.121250.08690637.836700.9707019.5241018.07790HepG2QKI
SLC44A5ENSG00000137968.121711.01020915.777900.9017021.6227020.45200HepG2RBM22
SLC44A5ENSG00000137968.12910.54630655.448200.474205.381804.66740HepG2NELFE
SLC44A5ENSG00000137968.12812.19660610.476800.411804.112803.38040HepG2RECQL
SLC44A5ENSG00000137968.12899.53930588.654500.611705.612904.69050HepG2RPLP0
SLC44A5ENSG00000137968.12953.41660772.730000.303002.004001.31490HepG2RPS2
SLC44A5ENSG00000137968.12672.81430446.934800.590004.232403.28240HepG2RRP9
SLC44A5ENSG00000137968.12441.65840541.32090-0.293602.052801.48470HepG2SAFB2
SLC44A5ENSG00000137968.12347.16450662.07220-0.931407.996906.80890HepG2SF3A3
SLC44A5ENSG00000137968.12198.04030444.65720-1.166906.723605.66500HepG2SF3B1
SLC44A5ENSG00000137968.12421.07680631.29480-0.584207.415006.44010HepG2SMN1
SLC44A5ENSG00000137968.12749.98110494.748700.600103.334902.47300HepG2SNRNP70
SLC44A5ENSG00000137968.12959.08080640.019700.583408.159707.44690HepG2SRSF1
SLC44A5ENSG00000137968.121207.01140898.032000.426505.978005.27900HepG2SSB
SLC44A5ENSG00000137968.12528.62110863.28190-0.707604.734203.25630HepG2STIP1
SLC44A5ENSG00000137968.12269.64360369.20000-0.453302.532901.63230HepG2SUPT6H
SLC44A5ENSG00000137968.12960.66600582.910800.720706.493105.52300HepG2SUPV3L1
SLC44A5ENSG00000137968.121383.86750575.296001.2662035.9201034.19500HepG2TAF15
SLC44A5ENSG00000137968.12789.87660528.596000.579406.039904.81070HepG2TIA1
SLC44A5ENSG00000137968.121229.89230590.716401.0579022.5288021.35890HepG2TIAL1
SLC44A5ENSG00000137968.12470.35580595.90290-0.341302.706102.14620HepG2TRIM56
SLC44A5ENSG00000137968.12261.06380467.75730-0.841406.679105.71520HepG2U2AF1
SLC44A5ENSG00000137968.12305.56660558.58810-0.870302.203801.33480HepG2U2AF2
SLC44A5ENSG00000137968.12738.89080986.71220-0.417302.547101.74440HepG2UBE2L3
SLC44A5ENSG00000137968.12234.52830344.36670-0.554202.795602.03150HepG2UCHL5
SLC44A5ENSG00000137968.12959.41290587.158800.7083012.9620011.65690HepG2UPF1
SLC44A5ENSG00000137968.12377.73150566.87570-0.585706.095905.26530HepG2UTP3
SLC44A5ENSG00000137968.12922.24940413.138301.1584029.5956027.84000HepG2ZC3H8
SLC44A5ENSG00000137968.12410.63800645.75940-0.653109.136508.28960HepG2ZNF622
SLC44A5ENSG00000137968.12309.20960581.80500-0.912008.383807.46940K562AGGF1
SLC44A5ENSG00000137968.12468.99830639.24730-0.446803.427302.30770K562AKAP8
SLC44A5ENSG00000137968.12436.38220605.37770-0.472203.535302.79340K562AKAP8L
SLC44A5ENSG00000137968.12382.93370535.84890-0.484702.713501.48400K562APOBEC3C
SLC44A5ENSG00000137968.12328.54870472.36090-0.523802.004801.48990K562AQR
SLC44A5ENSG00000137968.12438.94190635.15510-0.533105.441904.10920K562ATP5C1
SLC44A5ENSG00000137968.12277.87120180.940200.618802.960102.05660K562BOP1
SLC44A5ENSG00000137968.12468.30090319.598600.551102.326801.36870K562CNOT7
SLC44A5ENSG00000137968.12496.15960682.61530-0.460303.534501.87050K562DDX19B
SLC44A5ENSG00000137968.12358.91690651.53530-0.8602012.4577010.30310K562DKC1
SLC44A5ENSG00000137968.12133.04990222.02440-0.738803.393902.23950K562EIF3D
SLC44A5ENSG00000137968.12744.62210607.276800.294102.312401.44880K562EIF4G2
SLC44A5ENSG00000137968.12368.84960203.273300.859505.368203.03700K562ESF1
SLC44A5ENSG00000137968.1296.15750191.17340-0.991405.212804.02350K562FIP1L1
SLC44A5ENSG00000137968.12261.23060157.925100.726003.779002.43340K562FKBP4
SLC44A5ENSG00000137968.12321.42140195.775700.715203.800302.79330K562FMR1
SLC44A5ENSG00000137968.12330.18850165.957700.992405.641404.28400K562FTO
SLC44A5ENSG00000137968.12142.84770264.08080-0.886506.403505.53860K562FXR1
SLC44A5ENSG00000137968.12252.09770364.14230-0.530503.168801.61040K562G3BP1
SLC44A5ENSG00000137968.12272.75540183.644400.570602.740501.94960K562GPKOW
SLC44A5ENSG00000137968.12402.31900182.023601.1441011.1520010.02120K562HNRNPC
SLC44A5ENSG00000137968.12130.04860260.64760-1.003007.813606.31920K562HNRNPU
SLC44A5ENSG00000137968.12209.28740380.69600-0.863205.639603.95640K562IGF2BP2
SLC44A5ENSG00000137968.12176.71490106.577000.729403.049301.47630K562ILF3
SLC44A5ENSG00000137968.12506.86360642.51600-0.342102.519601.73550K562KIF1C
SLC44A5ENSG00000137968.12212.05450400.29820-0.916608.774507.23250K562MAGOH
SLC44A5ENSG00000137968.12358.32770614.99810-0.779305.646403.92410K562MAK16
SLC44A5ENSG00000137968.12320.92490719.77200-1.1653011.981209.87490K562MBNL1
SLC44A5ENSG00000137968.121093.18900647.295700.755908.986507.01790K562MSI2
SLC44A5ENSG00000137968.12359.71380236.508100.604904.358303.36350K562MTPAP
SLC44A5ENSG00000137968.12290.45790504.50290-0.796505.144903.81340K562NAA15
SLC44A5ENSG00000137968.12114.49580204.37530-0.835903.926202.32050K562NONO
SLC44A5ENSG00000137968.12351.61280262.798900.419902.544301.82520K562NSUN2
SLC44A5ENSG00000137968.12267.45670391.19520-0.548603.773402.18690K562PCBP1
SLC44A5ENSG00000137968.12133.52190356.20310-1.4156014.1234011.80520K562PCBP2
SLC44A5ENSG00000137968.12410.61100245.168500.743902.841101.99730K562PCBP3
SLC44A5ENSG00000137968.1278.93210201.80430-1.354307.911506.63580K562PRPF8
SLC44A5ENSG00000137968.12158.09390388.89970-1.2986015.7349014.21740K562PTBP1
SLC44A5ENSG00000137968.12490.35460662.58400-0.434302.516701.73840K562PUF60
SLC44A5ENSG00000137968.12320.36060600.48900-0.906407.329306.49190K562PUS1
SLC44A5ENSG00000137968.12474.60040270.862500.809104.161802.36020K562RAVER1
SLC44A5ENSG00000137968.12337.98690584.98620-0.791408.629107.60790K562RBM15
SLC44A5ENSG00000137968.12464.31610322.224600.526903.481901.67170K562RBM17
SLC44A5ENSG00000137968.12257.62640373.01860-0.534003.072602.18220K562RBM22
SLC44A5ENSG00000137968.12128.02870277.38920-1.115403.793202.31870K562SF1
SLC44A5ENSG00000137968.12137.67110295.18150-1.1004010.012508.33960K562SF3B4
SLC44A5ENSG00000137968.12163.64930381.22880-1.220008.919807.66020K562SRSF1
SLC44A5ENSG00000137968.12216.03800306.21330-0.503302.392201.42300K562SRSF4
SLC44A5ENSG00000137968.12388.34660250.828100.630503.876402.24660K562SSRP1
SLC44A5ENSG00000137968.12337.32340229.412500.556102.805901.54510K562STAU1
SLC44A5ENSG00000137968.12670.77000381.093700.815603.174301.61380K562SUPT6H
SLC44A5ENSG00000137968.12288.86790195.369500.564102.524401.55940K562SUPV3L1
SLC44A5ENSG00000137968.1284.39840188.61650-1.160207.109805.77780K562SYNCRIP
SLC44A5ENSG00000137968.12252.94820365.13250-0.529602.955101.81910K562TRA2A
SLC44A5ENSG00000137968.12400.93860223.620800.842204.035302.27900K562TRIP6
SLC44A5ENSG00000137968.12306.19930206.784900.566202.754301.73800K562UCHL5
SLC44A5ENSG00000137968.12386.49810608.71140-0.655303.084301.68920K562UTP18
SLC44A5ENSG00000137968.12404.29030238.434100.761706.330704.97320K562WDR3
SLC44A5ENSG00000137968.12405.80270247.928600.710806.915405.63120K562WDR43
SLC44A5ENSG00000137968.12951.70820531.998500.8390011.684909.76750K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC44A5 is not available on ENCORE database.





2 RBPs can affect the splicing of SLC44A5 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESLC44A5ENSG00000137968.12chr1-756802897568036375679603756796747568143875681542-0.123000.008170.07787excludedHepG2U2AF2
SESLC44A5ENSG00000137968.12chr1-7568028975680363756796037567967475681438756815420.101000.001050.09880includedHepG2HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SLC44A5 is not avaliable on ENCORE database.