SHB

General Information

Gene Name       : SHB
Gene ID             : ENSG00000107338.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SHB)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SHBENSG00000107338.90.981.641.31ENCSR000AEF
HepG2SHBENSG00000107338.912.508.2810.39ENCSR985KAT
K562SHBENSG00000107338.96.946.456.70ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SHB is not avaliable on ENCORE database.



Proteins bound to RNA
  • SHB RNA is bound by 27 proteins.  







eCLIP assay for SHB is not avaliable on ENCORE database.





27 proteins are bound to SHB RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr93791979337919848-3'-UTR,CDS,intron-Distal3.104444.59907HepG2PPIG
chr93791924237919319-3'-UTR,intron-Distal4.253964.85626K562TARDBP
chr93806915438069189-5'-UTR,intron-Distal3.315295.35277HepG2DDX3X
chr93806880438068861-5'-UTR,intron-Distal3.067794.41677HepG2EIF3H
chr93806896538069071-5'-UTR,intron-Distal4.0152818.03090HepG2DDX3X
chr93806890838068937-5'-UTR,intron-Distal4.105274.82666HepG2DDX3X
chr93806908738069138-5'-UTR,intron-Distal3.655048.75653HepG2DDX3X
chr93806798538068074-CDS,intron-Distal3.390016.53290HepG2BUD13
chr93801603538016049-CDS,intron-Distal3.515933.05161HepG2PPIG
chr93797461637974678-5'-UTR,CDS,intron-Distal,intron-Proximal3.995964.21542HepG2SRSF1
chr93806789038067985-CDS,intron-Distal3.557228.76705HepG2BUD13
chr93797457037974632-5'-UTR,CDS,intron-Distal,intron-Proximal3.252466.18341HepG2PRPF8
chr93801601738016074-CDS,intron-Distal3.173845.00751HepG2BCLAF1
chr93806800538068083-CDS,intron-Distal3.375818.07998HepG2PPIG
chr93801449038014551-intron-Distal3.552384.61500HepG2HNRNPM
chr93800877438008947-intron-Distal3.828806.29348HepG2HNRNPK
chr93805863938058727-intron-Distal3.025876.33844HepG2HNRNPU
chr93792676937926852-intron-Distal3.341934.83226HepG2HNRNPM
chr93793035637930472-intron-Distal3.699813.59783HepG2HNRNPK
chr93801659738016645-intron-Distal4.030843.27946HepG2HNRNPM
chr93798176137981848-intron-Distal3.447614.43403HepG2CSTF2
chr93800512338005205-intron-Distal4.594055.31936HepG2HNRNPK
chr93806766438067760-intron-Distal3.203583.47356HepG2HNRNPK
chr93806737438067409-intron-Distal3.748563.17235HepG2HNRNPK
chr93803875138038916-intron-Distal3.937737.31862HepG2HNRNPK
chr93805258438052646-intron-Distal4.074123.29554HepG2GTF2F1
chr93804137638041436-intron-Distal4.395245.33511HepG2HNRNPK
chr93806125338061312-intron-Distal3.224153.40206HepG2HNRNPC
chr93792687737926941-intron-Distal4.774895.72853HepG2HNRNPM
chr93795605737956106-intron-Distal,intron-Proximal3.980333.25678HepG2SF3B4
chr93800253238002619-intron-Distal4.297605.02240HepG2PRPF4
chr93795313337953222-intron-Distal4.280834.07750HepG2HNRNPK
chr93803638738036486-intron-Distal3.277113.11000HepG2HNRNPM
chr93800327538003355-intron-Distal5.154458.29787HepG2PRPF4
chr93805741438057472-intron-Distal3.316516.60828HepG2QKI
chr93800195138002037-intron-Distal3.671514.34707HepG2HNRNPK
chr93791904237919115-intron-Distal,intron-Proximal4.679345.63362K562AGGF1
chr93792120037921258-intron-Distal3.760603.16310HepG2CSTF2T
chr93800994638010023-intron-Distal3.707583.59771HepG2QKI
chr93801478238014838-intron-Distal3.545574.99837HepG2XPO5
chr93804087238040922-intron-Distal3.425383.84715HepG2HNRNPK
chr93804146738041554-intron-Distal3.111373.23948HepG2HNRNPK
chr93795482437955016-intron-Distal4.055604.02963HepG2DDX59
chr93795099237951050-intron-Distal4.691766.36553HepG2RBFOX2
chr93800313838003238-intron-Distal3.426304.59945HepG2HNRNPK
chr93798493137984966-intron-Distal4.310164.66211HepG2XRN2
chr93800329738003409-intron-Distal3.081175.22763HepG2GTF2F1
chr93806590438065987-intron-Distal3.859453.48722HepG2PRPF4
chr93792507637925129-intron-Distal3.163673.46580HepG2CSTF2T
chr93792507237925146-intron-Distal4.121483.01994HepG2GTF2F1
chr93795880937958876-intron-Distal3.073323.37567HepG2HNRNPK
chr93805945538059539-intron-Distal3.926326.74598HepG2QKI
chr93802177938021852-intron-Distal4.105383.18711HepG2ILF3
chr93801591438015954-intron-Distal,intron-Proximal4.252195.47493HepG2BUD13
chr93797985837979920-intron-Distal4.299255.84425HepG2CSTF2
chr93800335538003405-intron-Distal4.080407.47076HepG2PRPF4
chr93794855537948621-intron-Distal,intron-Proximal3.833997.06478HepG2RBM22
chr93799190037991973-intron-Distal3.143634.35585HepG2RBFOX2
chr93795491037955026-intron-Distal4.088196.99640HepG2HNRNPK
chr93803259838032690-intron-Distal3.810923.27987HepG2TAF15
chr93806198938062097-intron-Distal3.748373.89405HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SHB is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SHB is not available on ENCORE database.

  • 95 RBPs can affect the levels of SHB.  








The Knockdown/knockout RNA-Seq assay for SHB is not available on ENCORE database.





95 RBPs can affect the gene expression of SHB :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SHBENSG00000107338.8586.497601316.84050-1.1669017.7688015.76500HepG2ABCF1
SHBENSG00000107338.81366.98740871.125600.6499014.1328012.98590HepG2ACO1
SHBENSG00000107338.8301.61060511.95890-0.763306.376304.94380HepG2ADAR
SHBENSG00000107338.81209.75700878.717000.461102.102101.63150HepG2AKAP1
SHBENSG00000107338.81508.33340919.018400.714703.595702.83020HepG2AUH
SHBENSG00000107338.81750.25250757.061001.2090025.8991024.37500HepG2BOP1
SHBENSG00000107338.8298.33080690.71120-1.211204.840303.83300HepG2CIRBP
SHBENSG00000107338.8706.81570870.76630-0.301002.610101.95990HepG2CKAP4
SHBENSG00000107338.81668.312501084.159100.621708.081806.28830HepG2CPSF7
SHBENSG00000107338.81281.79810658.498200.9608023.1198021.63410HepG2CELF1
SHBENSG00000107338.81039.62230708.009500.554109.850908.59060HepG2DAZAP1
SHBENSG00000107338.8526.74110805.58820-0.612907.462906.20550HepG2DDX19B
SHBENSG00000107338.8243.31980499.29250-1.0370011.125109.87190HepG2DDX21
SHBENSG00000107338.8225.26560488.71650-1.1174013.0315011.11040HepG2DDX24
SHBENSG00000107338.81478.76220841.572800.813106.513705.59490HepG2DDX3X
SHBENSG00000107338.8631.60510355.931500.827302.184701.48990HepG2DDX55
SHBENSG00000107338.81388.35240789.243400.814703.777902.64200HepG2DDX59
SHBENSG00000107338.82502.33660723.332601.7904039.8326037.90160HepG2DDX6
SHBENSG00000107338.8253.02860833.38720-1.7197031.0908029.45690HepG2DKC1
SHBENSG00000107338.8879.21750515.489600.770205.857504.86800HepG2DNAJC21
SHBENSG00000107338.8723.82120511.002200.502206.517905.57580HepG2DNAJC2
SHBENSG00000107338.8350.92110574.49410-0.711103.408102.39330HepG2EEF2
SHBENSG00000107338.8986.57240694.956000.505402.392301.83930HepG2EIF2S1
SHBENSG00000107338.8822.55940466.284500.818808.032306.56720HepG2EIF3D
SHBENSG00000107338.8229.41590471.58150-1.0395011.679109.77880HepG2EIF3G
SHBENSG00000107338.81202.61260669.138700.8457011.568309.97580HepG2EIF4G2
SHBENSG00000107338.8437.795101140.53290-1.3814027.5127024.81030HepG2ESF1
SHBENSG00000107338.8905.498301055.17530-0.220702.014701.48370HepG2ETF1
SHBENSG00000107338.8615.14720475.871200.370302.377901.31470HepG2FASTKD2
SHBENSG00000107338.8357.30910763.58310-1.095604.253203.13870HepG2G3BP2
SHBENSG00000107338.8623.58170427.043000.546103.192102.09520HepG2GNB2L1
SHBENSG00000107338.8743.22770501.682800.566903.035301.37910HepG2GTF2F1
SHBENSG00000107338.81011.07970831.572500.281902.722201.75110HepG2HDGF
SHBENSG00000107338.8283.47250520.42880-0.876507.975806.96190HepG2HNRNPA1
SHBENSG00000107338.81059.24230644.931000.7157015.1671013.70210HepG2HNRNPL
SHBENSG00000107338.8661.87090917.22320-0.470704.566503.37810HepG2HNRNPM
SHBENSG00000107338.8463.40310575.07330-0.311502.284901.72860HepG2HNRNPU
SHBENSG00000107338.8786.83080587.414700.421603.336902.53790HepG2ILF2
SHBENSG00000107338.8581.43850418.509000.474302.808101.66610HepG2LARP7
SHBENSG00000107338.8868.383601075.85360-0.309102.428601.66850HepG2MSI2
SHBENSG00000107338.81162.81380903.461500.364002.766801.55130HepG2NAA15
SHBENSG00000107338.81051.71600702.062800.583007.807506.54310HepG2NOL12
SHBENSG00000107338.8482.38230666.66980-0.466803.006802.22760HepG2NSUN2
SHBENSG00000107338.81555.58860761.263501.030908.416006.82660HepG2PABPC1
SHBENSG00000107338.8572.25210770.98500-0.430104.333503.38950HepG2PRPF4
SHBENSG00000107338.8299.68860529.56600-0.821305.118603.49970HepG2PRPF6
SHBENSG00000107338.8929.01220711.449400.384804.962504.21570HepG2PUM1
SHBENSG00000107338.8481.46900887.27300-0.881909.464008.43880HepG2PUS1
SHBENSG00000107338.81291.66960486.070201.4099013.6272012.17460HepG2RAVER1
SHBENSG00000107338.81954.928601377.914600.504507.312106.00910HepG2RBM15
SHBENSG00000107338.8590.56990901.76250-0.610607.952607.11950HepG2NELFE
SHBENSG00000107338.8415.42060839.93750-1.0157018.9083017.53670HepG2RECQL
SHBENSG00000107338.81448.593701119.292700.372002.920402.22110HepG2RPLP0
SHBENSG00000107338.8266.53450477.62330-0.841605.144703.87980HepG2RPS10
SHBENSG00000107338.8425.82870836.81820-0.974604.225803.23700HepG2RPS3A
SHBENSG00000107338.8700.37350512.115600.451603.802903.06870HepG2SAFB2
SHBENSG00000107338.8666.14240455.329700.548803.918502.80040HepG2SERBP1
SHBENSG00000107338.81360.84660976.168100.479203.151502.43230HepG2SF3A3
SHBENSG00000107338.8521.68480744.16440-0.512403.885803.06170HepG2SF3B1
SHBENSG00000107338.8850.35130597.192000.509807.251606.28660HepG2SMN1
SHBENSG00000107338.81219.78250496.060801.2979016.5363014.15090HepG2SMNDC1
SHBENSG00000107338.81088.71310586.137200.893202.832701.50290HepG2SNRNP200
SHBENSG00000107338.8610.81330828.01800-0.438902.004101.34440HepG2SNRNP70
SHBENSG00000107338.81259.56210996.097300.338503.997503.42740HepG2SRFBP1
SHBENSG00000107338.8497.43850880.52590-0.8238013.5677012.69100HepG2SRSF1
SHBENSG00000107338.81075.87610716.383300.5866010.207509.26360HepG2SRSF9
SHBENSG00000107338.8247.13910864.83590-1.8071054.0417052.48030HepG2SSB
SHBENSG00000107338.81096.204401458.38260-0.411902.759701.47890HepG2SSRP1
SHBENSG00000107338.8782.57460454.267300.784605.219103.56950HepG2SUB1
SHBENSG00000107338.8926.89710752.557300.300502.986902.34510HepG2SUCLG1
SHBENSG00000107338.81297.18250897.605200.531106.037904.67850HepG2SUPT6H
SHBENSG00000107338.8353.42660791.54310-1.1633021.3644020.01260HepG2TAF15
SHBENSG00000107338.8714.958201432.46740-1.002605.954904.44940HepG2TBRG4
SHBENSG00000107338.8425.90650237.360100.843402.618601.64600HepG2TFIP11
SHBENSG00000107338.8369.40200558.71070-0.596905.331104.68350HepG2TIAL1
SHBENSG00000107338.81120.83630563.791600.9912025.1599023.67150HepG2TRIM56
SHBENSG00000107338.8518.11250654.76800-0.337702.068101.32290HepG2TUFM
SHBENSG00000107338.81102.10350693.074700.669105.687304.46050HepG2UBE2L3
SHBENSG00000107338.81110.93380865.712700.359704.315903.47570HepG2UPF1
SHBENSG00000107338.8590.73720889.82590-0.591006.558005.01900HepG2UTP18
SHBENSG00000107338.81596.30460835.810400.9334027.3044025.72600HepG2UTP3
SHBENSG00000107338.82061.39410952.117101.1143052.7511051.14290HepG2ZNF622
SHBENSG00000107338.8471.02260307.370300.615705.411504.66000K562AGGF1
SHBENSG00000107338.8489.65130319.829600.614403.278102.56530K562AKAP8L
SHBENSG00000107338.8365.91900266.743200.456002.496801.74980K562CPSF6
SHBENSG00000107338.8295.32450193.624800.608903.730702.49880K562DDX3X
SHBENSG00000107338.8529.17120394.984200.421803.266702.56780K562DDX47
SHBENSG00000107338.8450.37000344.179400.387902.532101.69860K562DKC1
SHBENSG00000107338.8335.83170171.133300.972504.226602.91160K562EIF3D
SHBENSG00000107338.8163.36280102.542400.671802.759501.96350K562EIF3G
SHBENSG00000107338.8397.64040271.443400.550703.186502.26330K562FMR1
SHBENSG00000107338.860.96980121.55610-0.995503.495902.68250K562G3BP2
SHBENSG00000107338.8340.65200254.658200.419601.989601.31300K562GPKOW
SHBENSG00000107338.8525.41490381.464600.461801.945901.30600K562GRSF1
SHBENSG00000107338.8450.26290339.430200.407602.339101.58960K562KIF1C
SHBENSG00000107338.8238.98870172.513100.470102.184201.43260K562MAGOH
SHBENSG00000107338.8582.08940380.246000.614205.061603.75650K562MBNL1
SHBENSG00000107338.8369.76800248.581600.572803.463802.47870K562METAP2
SHBENSG00000107338.8386.95480266.523900.537802.362101.56190K562NAA15
SHBENSG00000107338.8247.74240167.612000.563602.995402.30710K562PTBP1
SHBENSG00000107338.8537.24620309.050500.797604.535303.79460K562RBM15
SHBENSG00000107338.8291.09930419.20020-0.526103.050301.61380K562SSRP1
SHBENSG00000107338.8477.79680387.929600.300502.052301.31620K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SHB is not available on ENCORE database.






No RBPs affect the alternative splcing events of SHB on ENCORE database.





The Knockdown/knockout RNA-Seq assay for SHB is not avaliable on ENCORE database.