SH3BP4

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SH3BP4	ENSG00000130147.15	0.00	0.00	0.00	ENCSR000AEF
HepG2	SH3BP4	ENSG00000130147.15	52.30	45.72	49.01	ENCSR985KAT
K562	SH3BP4	ENSG00000130147.15	0.01	0.00	0.01	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SH3BP4 is not avaliable on ENCORE database.

Proteins bound to RNA

SH3BP4 RNA is bound by 46 proteins.

eCLIP assay for SH3BP4 is not avaliable on ENCORE database.

46 proteins are bound to SH3BP4 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	235962566	235962627	+	3'-UTR	3.06356	4.14493	HepG2	UPF1
chr2	235943512	235943591	+	3'-UTR,intron-Proximal	3.29855	8.31208	HepG2	PPIG
chr2	235962462	235962512	+	3'-UTR	3.28338	4.40253	HepG2	UPF1
chr2	235964034	235964087	+	3'-UTR	4.23553	7.56798	HepG2	IGF2BP1
chr2	235943518	235943603	+	3'-UTR,intron-Proximal	4.11985	22.09141	HepG2	DDX3X
chr2	235964280	235964356	+	3'-UTR,polyA_site	4.61345	5.06031	HepG2	CSTF2
chr2	235963061	235963104	+	3'-UTR	4.33491	4.20997	HepG2	UPF1
chr2	235962572	235962603	+	3'-UTR	3.92792	3.35081	HepG2	G3BP1
chr2	235963281	235963319	+	3'-UTR	3.84172	3.35877	HepG2	UPF1
chr2	235963205	235963263	+	3'-UTR	5.72091	21.66238	HepG2	LIN28B
chr2	235962512	235962566	+	3'-UTR	3.67120	7.60345	HepG2	UPF1
chr2	235943528	235943615	+	3'-UTR,intron-Proximal	3.19746	7.95770	HepG2	GRWD1
chr2	235963140	235963257	+	3'-UTR	4.03711	7.31670	HepG2	UPF1
chr2	235962875	235962913	+	3'-UTR	4.24542	4.54659	HepG2	G3BP1
chr2	235903894	235903986	+	5'-UTR,intron-Distal,intron-Proximal	3.62475	3.67894	HepG2	AQR
chr2	235890300	235890439	+	5'-UTR,intron-Distal,intron-Proximal	3.31810	4.23271	HepG2	HNRNPM
chr2	235860713	235860764	+	5'-UTR	3.02708	5.00690	HepG2	EFTUD2
chr2	235860754	235860801	+	5'-UTR	3.67175	5.56074	HepG2	NCBP2
chr2	235903985	235904036	+	5'-UTR,intron-Distal,intron-Proximal	3.24471	6.49144	HepG2	SRSF1
chr2	235903954	235904046	+	5'-UTR,intron-Distal,intron-Proximal	3.62109	12.20588	HepG2	PPIG
chr2	235887524	235887574	+	5'-UTR,intron-Distal,intron-Proximal	4.27822	8.70378	HepG2	HNRNPM
chr2	235887381	235887440	+	5'-UTR,intron-Distal	3.42409	4.21158	HepG2	CSTF2T
chr2	235860681	235860813	+	5'-UTR	4.05595	50.44153	HepG2	DDX3X
chr2	235887622	235887687	+	5'-UTR,intron-Distal,intron-Proximal	4.99565	14.03469	HepG2	HNRNPM
chr2	235903992	235904055	+	5'-UTR,intron-Distal,intron-Proximal	3.49052	18.24834	HepG2	PRPF8
chr2	235860682	235860754	+	5'-UTR	3.20438	6.25617	HepG2	NCBP2
chr2	235887574	235887622	+	5'-UTR,intron-Distal,intron-Proximal	4.04220	8.93039	HepG2	HNRNPM
chr2	235943656	235943692	+	CDS	4.69023	3.32488	HepG2	DDX3X
chr2	235961364	235961443	+	CDS,intron-Proximal	4.34851	7.11475	HepG2	BUD13
chr2	235943702	235943751	+	CDS	3.23625	3.50786	HepG2	G3BP1
chr2	235951765	235951808	+	CDS	5.75299	10.97175	HepG2	RBM15
chr2	235962233	235962319	+	CDS,intron-Proximal	3.78786	8.03852	HepG2	G3BP1
chr2	235962276	235962341	+	CDS	3.46014	5.14253	HepG2	GRWD1
chr2	235961202	235961243	+	CDS,intron-Proximal	3.77298	4.86518	HepG2	BUD13
chr2	235951866	235951934	+	CDS,intron-Proximal	3.75978	15.47486	HepG2	PRPF8
chr2	235951368	235951483	+	CDS	3.10395	6.34055	HepG2	PPIG
chr2	235943745	235943806	+	CDS,intron-Proximal	3.20776	3.94654	HepG2	PRPF8
chr2	235961393	235961401	+	CDS,intron-Proximal	3.53635	16.15372	HepG2	PRPF8
chr2	235961390	235961432	+	CDS,intron-Proximal	5.60030	9.60578	HepG2	AQR
chr2	235961314	235961396	+	CDS,intron-Proximal	4.25086	8.83652	HepG2	G3BP1
chr2	235949534	235949568	+	CDS	3.25267	3.24162	HepG2	G3BP1
chr2	235951339	235951450	+	CDS	3.31402	5.31765	HepG2	DDX6
chr2	235951506	235951563	+	CDS	3.47099	4.71371	HepG2	GRWD1
chr2	235949784	235949851	+	CDS	3.40635	6.24463	HepG2	GRWD1
chr2	235962192	235962276	+	CDS,intron-Proximal	3.60501	6.36450	HepG2	U2AF2
chr2	235961175	235961223	+	CDS,intron-Proximal	3.37600	3.67894	HepG2	AQR
chr2	235905779	235905819	+	intron-Distal	3.84603	4.69054	HepG2	CSTF2T
chr2	235919585	235919629	+	intron-Distal	4.85481	16.18977	HepG2	PCBP2
chr2	235897857	235897951	+	intron-Distal	4.52141	9.98098	HepG2	HNRNPM
chr2	235919579	235919653	+	intron-Distal	5.00601	5.20569	HepG2	PCBP1
chr2	235860953	235861019	+	intron-Distal	3.37014	4.87202	HepG2	FAM120A
chr2	235878807	235878842	+	intron-Distal	5.82507	14.30856	HepG2	GTF2F1
chr2	235937884	235937941	+	intron-Distal	4.10679	3.56485	HepG2	GRSF1
chr2	235883813	235883881	+	intron-Distal	4.07217	4.36284	HepG2	FUS
chr2	235932933	235933061	+	intron-Distal	4.37542	11.27213	HepG2	RBFOX2
chr2	235901630	235901746	+	intron-Distal	3.89745	6.15196	HepG2	HNRNPM
chr2	235919829	235919905	+	intron-Distal	5.79564	36.30777	HepG2	PCBP2
chr2	235875682	235875757	+	intron-Distal	3.64107	5.26543	HepG2	RBFOX2
chr2	235911799	235911876	+	intron-Distal	4.40863	4.66899	HepG2	HNRNPM
chr2	235883755	235883817	+	intron-Distal	4.10136	3.80418	HepG2	AGGF1
chr2	235878707	235878807	+	intron-Distal	4.35653	23.49765	HepG2	AGGF1
chr2	235955975	235956028	+	intron-Distal	3.78124	3.29239	HepG2	CSTF2
chr2	235891330	235891432	+	intron-Distal	4.09556	8.40843	HepG2	PRPF4
chr2	235872666	235872728	+	intron-Distal	4.38976	4.02354	HepG2	STAU2
chr2	235916076	235916144	+	intron-Distal	4.24465	3.80014	HepG2	FUS
chr2	235918959	235918999	+	intron-Distal	5.07427	8.41240	HepG2	SUGP2
chr2	235953330	235953369	+	intron-Distal	3.24783	3.72734	HepG2	CSTF2T
chr2	235915795	235915855	+	intron-Distal	3.53578	4.46248	HepG2	FAM120A
chr2	235919576	235919649	+	intron-Distal	4.36464	11.41473	HepG2	MATR3
chr2	235861443	235861466	+	intron-Distal	4.33263	3.97018	HepG2	HNRNPM
chr2	235861147	235861194	+	intron-Distal	3.30464	5.39783	HepG2	NKRF
chr2	235919835	235919930	+	intron-Distal	4.72969	11.64729	HepG2	PTBP1
chr2	235861514	235861556	+	intron-Distal	4.90648	5.22378	HepG2	XRN2
chr2	235861281	235861332	+	intron-Distal,intron-Proximal	4.06856	4.42611	HepG2	SFPQ
chr2	235878333	235878370	+	intron-Distal	4.60862	10.23306	HepG2	HNRNPL
chr2	235918053	235918120	+	intron-Distal	3.54570	6.41195	HepG2	PTBP1
chr2	235877203	235877247	+	intron-Distal	5.12614	16.59560	HepG2	HNRNPM
chr2	235878731	235878757	+	intron-Distal	4.90104	37.08753	HepG2	HNRNPL
chr2	235919655	235919738	+	intron-Distal	3.19450	5.41116	HepG2	PTBP1
chr2	235878035	235878083	+	intron-Distal	3.38274	5.54222	HepG2	HNRNPM
chr2	235913637	235913677	+	intron-Distal	3.82644	5.37814	HepG2	HNRNPM
chr2	235873467	235873522	+	intron-Distal	4.12991	3.80014	HepG2	FUS
chr2	235860955	235861026	+	intron-Distal	3.94548	3.46348	HepG2	XRN2
chr2	235867378	235867418	+	intron-Distal	3.31319	3.58849	HepG2	HNRNPUL1
chr2	235907609	235907654	+	intron-Distal	3.21713	3.48399	HepG2	CSTF2T
chr2	235861257	235861330	+	intron-Distal,intron-Proximal	3.84130	4.60998	HepG2	PCBP2
chr2	235915791	235915844	+	intron-Distal	4.05962	3.16983	HepG2	FUS
chr2	235861053	235861105	+	intron-Distal	3.70564	4.45974	HepG2	GTF2F1
chr2	235919710	235919735	+	intron-Distal	4.70080	18.15930	HepG2	PCBP2
chr2	235878499	235878543	+	intron-Distal	4.99322	18.88187	HepG2	HNRNPL
chr2	235919579	235919655	+	intron-Distal	3.89721	13.24150	HepG2	PTBP1
chr2	235919629	235919710	+	intron-Distal	5.37582	43.54456	HepG2	PCBP2
chr2	235868693	235868871	+	intron-Distal	5.81708	26.92456	HepG2	SFPQ
chr2	235936690	235936753	+	intron-Distal	4.95865	6.08412	HepG2	HNRNPM
chr2	235861396	235861441	+	intron-Distal	3.63125	9.52427	HepG2	HNRNPM
chr2	235878341	235878396	+	intron-Distal	3.49180	9.84288	HepG2	AGGF1
chr2	235870537	235870617	+	intron-Distal	4.10563	6.90583	HepG2	GTF2F1
chr2	235861152	235861200	+	intron-Distal	3.33690	6.68106	HepG2	CSTF2T
chr2	235861222	235861324	+	intron-Distal,intron-Proximal	3.43570	15.83577	HepG2	CSTF2T
chr2	235870523	235870608	+	intron-Distal	3.49164	9.74367	HepG2	PRPF4
chr2	235878981	235879028	+	intron-Distal	3.04524	4.33755	HepG2	AGGF1
chr2	235860835	235860941	+	intron-Distal,intron-Proximal	3.78962	16.65529	HepG2	CSTF2T
chr2	235863776	235863793	+	intron-Distal	4.18109	3.72398	HepG2	SFPQ
chr2	235909069	235909127	+	intron-Distal	4.16608	4.36133	HepG2	CSTF2T
chr2	235861245	235861308	+	intron-Distal,intron-Proximal	3.98129	7.70912	HepG2	PRPF4
chr2	235956633	235956707	+	intron-Distal	4.33651	14.51547	HepG2	RBFOX2
chr2	235878772	235878787	+	intron-Distal	6.13125	51.94520	HepG2	HNRNPL
chr2	235941406	235941453	+	intron-Distal	4.50234	4.28089	HepG2	FAM120A
chr2	235924333	235924391	+	intron-Distal	3.79659	3.41108	HepG2	FUS
chr2	235920473	235920509	+	intron-Distal	4.32570	4.61447	HepG2	SUGP2
chr2	235937817	235937904	+	intron-Distal	3.93570	6.29610	HepG2	RBFOX2
chr2	235887028	235887089	+	intron-Distal	4.01993	3.98095	HepG2	HNRNPL
chr2	235861375	235861441	+	intron-Distal	3.63454	8.63077	HepG2	SFPQ
chr2	235941401	235941451	+	intron-Distal	3.11517	5.21772	HepG2	CSTF2T
chr2	235937904	235937979	+	intron-Distal	3.76518	6.03807	HepG2	RBFOX2
chr2	235867107	235867174	+	intron-Distal	3.23503	3.01154	HepG2	HNRNPU
chr2	235941501	235941537	+	intron-Distal	3.83279	3.16310	HepG2	CSTF2T
chr2	235897742	235897857	+	intron-Distal	3.28178	5.45871	HepG2	HNRNPM
chr2	235918269	235918319	+	intron-Distal	5.24592	6.79594	HepG2	MATR3
chr2	235919649	235919742	+	intron-Distal	3.52068	6.70437	HepG2	MATR3
chr2	235883461	235883552	+	intron-Distal	5.45325	8.91362	HepG2	SFPQ
chr2	235937854	235937906	+	intron-Distal	3.24244	3.48399	HepG2	CSTF2T
chr2	235878764	235878772	+	intron-Distal	5.18188	44.49960	HepG2	HNRNPL
chr2	235887892	235887947	+	intron-Distal	3.86780	3.41442	HepG2	HNRNPK
chr2	235918190	235918265	+	intron-Distal	3.62339	3.89405	HepG2	PTBP1
chr2	235919842	235919923	+	intron-Distal	4.70058	17.33398	HepG2	MATR3
chr2	235944963	235945052	+	intron-Distal	4.08880	3.55754	HepG2	U2AF2
chr2	235871975	235872104	+	intron-Distal	3.27686	7.75110	HepG2	SFPQ
chr2	235920226	235920320	+	intron-Distal	3.11198	4.03654	HepG2	SFPQ
chr2	235919632	235919692	+	intron-Distal	4.18118	4.50495	HepG2	ILF3
chr2	235919535	235919576	+	intron-Distal	3.47828	4.69218	HepG2	MATR3
chr2	235883778	235883872	+	intron-Distal	3.79698	5.13010	HepG2	HNRNPUL1
chr2	235891687	235891772	+	intron-Distal	3.07279	3.58507	HepG2	XPO5
chr2	235922797	235922862	+	intron-Distal	4.13986	3.72398	HepG2	SFPQ
chr2	235883751	235883829	+	intron-Distal	3.85974	7.63365	HepG2	HNRNPM
chr2	235875980	235876043	+	intron-Distal	4.52757	5.25929	HepG2	GTF2F1
chr2	235878861	235878905	+	intron-Distal	3.60085	9.56135	HepG2	AGGF1
chr2	235869767	235869816	+	intron-Distal	4.54024	3.75030	HepG2	XRCC6
chr2	235861066	235861097	+	intron-Distal	3.99981	3.00241	HepG2	SFPQ
chr2	235887225	235887267	+	intron-Distal	4.94118	7.51037	HepG2	HNRNPM
chr2	235916084	235916154	+	intron-Distal	3.53063	9.47641	HepG2	CSTF2T
chr2	235873267	235873340	+	intron-Distal	3.07216	6.44311	HepG2	CSTF2T
chr2	235917245	235917309	+	intron-Distal	4.49315	4.31720	HepG2	MATR3
chr2	235878807	235878861	+	intron-Distal	4.69203	25.44898	HepG2	AGGF1
chr2	235878465	235878489	+	intron-Distal	3.65234	7.72442	HepG2	AGGF1
chr2	235903853	235903945	+	intron-Distal,intron-Proximal	6.49630	25.03901	HepG2	SF3B4
chr2	235867556	235867633	+	intron-Distal	3.43223	4.19392	HepG2	GTF2F1
chr2	235924344	235924405	+	intron-Distal	3.34071	3.23984	HepG2	HNRNPUL1
chr2	235865871	235865889	+	intron-Distal	3.04431	3.21744	HepG2	HNRNPC
chr2	235877817	235877869	+	intron-Distal	3.55908	5.72132	HepG2	HNRNPM
chr2	235870692	235870746	+	intron-Distal	4.29229	3.27582	HepG2	SFPQ
chr2	235919528	235919579	+	intron-Distal	5.76008	5.16101	HepG2	PCBP1
chr2	235861049	235861109	+	intron-Distal	3.52544	5.32184	HepG2	PRPF4
chr2	235861505	235861566	+	intron-Distal	4.49565	8.19743	HepG2	HNRNPM
chr2	235878757	235878764	+	intron-Distal	5.00265	38.42833	HepG2	HNRNPL
chr2	235894089	235894166	+	intron-Distal	3.63437	5.35725	HepG2	HNRNPC
chr2	235940682	235940754	+	intron-Distal	3.32512	3.49516	HepG2	CSTF2T
chr2	235872311	235872370	+	intron-Distal	3.15387	4.50064	HepG2	SFPQ
chr2	235878787	235878824	+	intron-Distal	5.96119	52.14185	HepG2	HNRNPL
chr2	235872176	235872258	+	intron-Distal	5.06032	7.20145	HepG2	SFPQ
chr2	235861243	235861349	+	intron-Distal,intron-Proximal	3.90343	8.57849	HepG2	GTF2F1
chr2	235952491	235952644	+	intron-Distal	3.79530	6.08282	HepG2	CDC40
chr2	235935561	235935625	+	intron-Distal	4.15476	4.24431	HepG2	RBFOX2
chr2	235914615	235914684	+	intron-Distal	4.09159	8.41758	HepG2	SUGP2
chr2	235914643	235914695	+	intron-Distal	3.51258	3.64140	HepG2	SFPQ
chr2	235883795	235883868	+	intron-Distal	3.13986	5.87019	HepG2	SFPQ
chr2	235919735	235919764	+	intron-Distal	5.28348	15.30086	HepG2	PCBP2
chr2	235907529	235907576	+	intron-Distal	4.58052	3.26261	HepG2	XRCC6
chr2	235861048	235861112	+	intron-Distal	3.12051	8.16818	HepG2	CSTF2T
chr2	235878664	235878728	+	intron-Distal	4.34409	27.12452	HepG2	HNRNPL
chr2	235878274	235878306	+	intron-Distal	3.06383	3.19398	HepG2	XPO5
chr2	235878728	235878793	+	intron-Distal	3.83691	12.22191	HepG2	XPO5
chr2	235878809	235878839	+	intron-Distal	4.31279	4.00049	HepG2	CDC40
chr2	235956250	235956314	+	intron-Distal	3.23756	7.46255	HepG2	CSTF2T
chr2	235955258	235955334	+	intron-Distal	4.45993	4.86595	HepG2	CSTF2
chr2	235883615	235883751	+	intron-Distal	3.65923	7.24726	HepG2	HNRNPM
chr2	235877918	235877967	+	intron-Distal	3.46209	6.18434	HepG2	HNRNPM
chr2	235903253	235903314	+	intron-Distal,intron-Proximal	4.49981	4.66110	HepG2	SFPQ
chr2	235860942	235861022	+	intron-Distal	3.96236	13.77966	HepG2	CSTF2T
chr2	235889107	235889203	+	intron-Distal	3.72765	6.33927	HepG2	SFPQ
chr2	235878396	235878465	+	intron-Distal	3.79809	17.92129	HepG2	AGGF1
chr2	235882531	235882628	+	intron-Distal	3.53211	4.71769	HepG2	ILF3
chr2	235918698	235918754	+	intron-Distal	4.16625	3.89149	HepG2	HNRNPK
chr2	235861140	235861201	+	intron-Distal	4.37935	4.35952	HepG2	PRPF4
chr2	235914035	235914122	+	intron-Distal	5.18580	8.83475	HepG2	HNRNPK
chr2	235878793	235878843	+	intron-Distal	4.60607	12.35528	HepG2	XPO5
chr2	235878735	235878807	+	intron-Distal	6.01018	11.03488	HepG2	GTF2F1
chr2	235920337	235920454	+	intron-Distal	3.10834	7.64902	HepG2	SUGP2
chr2	235883920	235883953	+	intron-Distal	4.25457	4.38558	HepG2	HNRNPM
chr2	235876883	235876903	+	intron-Distal	4.14870	3.34098	HepG2	HNRNPM
chr2	235935434	235935492	+	intron-Distal	3.18138	3.27165	HepG2	RBFOX2
chr2	235918292	235918352	+	intron-Distal	3.00583	6.05689	HepG2	SUGP2
chr2	235919533	235919585	+	intron-Distal	5.77512	20.20057	HepG2	PCBP2
chr2	235892372	235892472	+	intron-Distal	3.90163	3.50377	HepG2	TAF15
chr2	235863329	235863436	+	intron-Distal	3.42880	4.93160	HepG2	SFPQ
chr2	235878568	235878664	+	intron-Distal	4.55484	28.86366	HepG2	HNRNPL
chr2	235924327	235924401	+	intron-Distal	3.25391	3.69754	HepG2	TAF15
chr2	235918058	235918124	+	intron-Distal	4.44660	9.65529	HepG2	MATR3
chr2	235897832	235897917	+	intron-Distal	4.04233	5.75967	HepG2	SFPQ
chr2	235861624	235861729	+	intron-Distal	3.80167	6.93753	HepG2	SFPQ
chr2	235877282	235877355	+	intron-Distal	5.36577	19.23465	HepG2	HNRNPM
chr2	235949470	235949525	+	intron-Proximal	4.35304	9.38475	HepG2	SF3B4
chr2	235961401	235961441	+	intron-Proximal	3.80282	18.79035	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for SH3BP4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SH3BP4 is not available on ENCORE database.
96 RBPs can affect the levels of SH3BP4.

The Knockdown/knockout RNA-Seq assay for SH3BP4 is not available on ENCORE database.

96 RBPs can affect the gene expression of SH3BP4 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SH3BP4	ENSG00000130147.11	3547.44340	4429.60560	-0.32040	2.63990	1.71950	HepG2	ABCF1
SH3BP4	ENSG00000130147.11	2693.21770	5704.77230	-1.08280	18.28280	17.04180	HepG2	AKAP1
SH3BP4	ENSG00000130147.11	3133.12500	4824.53910	-0.62280	7.01250	5.40540	HepG2	AKAP8
SH3BP4	ENSG00000130147.11	2477.59860	3317.06550	-0.42100	8.72590	7.46110	HepG2	AKAP8L
SH3BP4	ENSG00000130147.11	2879.41970	4720.07130	-0.71300	10.09380	8.65630	HepG2	ASCC1
SH3BP4	ENSG00000130147.11	2388.41020	3960.00440	-0.72950	7.15730	6.24770	HepG2	BOP1
SH3BP4	ENSG00000130147.11	4619.94780	3743.15970	0.30350	3.61460	2.74870	HepG2	CALR
SH3BP4	ENSG00000130147.11	2886.92670	4484.44080	-0.63540	8.60520	7.30200	HepG2	CIRBP
SH3BP4	ENSG00000130147.11	3681.55110	3300.78990	0.15740	2.13870	1.54300	HepG2	CKAP4
SH3BP4	ENSG00000130147.11	1981.67610	3716.20030	-0.90710	8.19170	6.89160	HepG2	CNOT7
SH3BP4	ENSG00000130147.11	2444.82070	3635.60720	-0.57250	3.87990	3.07820	HepG2	CPSF6
SH3BP4	ENSG00000130147.11	5310.37280	3758.70280	0.49850	12.24890	11.08440	HepG2	CELF1
SH3BP4	ENSG00000130147.11	2130.46310	3331.04910	-0.64480	10.35560	9.13630	HepG2	DDX21
SH3BP4	ENSG00000130147.11	2327.84140	3260.26480	-0.48600	7.24320	5.77240	HepG2	DDX24
SH3BP4	ENSG00000130147.11	1970.02140	5464.42090	-1.47190	37.40010	35.37880	HepG2	DDX3X
SH3BP4	ENSG00000130147.11	3313.23530	4694.80280	-0.50280	4.57750	3.79980	HepG2	DDX6
SH3BP4	ENSG00000130147.11	1877.24900	2686.85260	-0.51730	6.66190	5.19210	HepG2	DHX30
SH3BP4	ENSG00000130147.11	2771.63410	3158.83600	-0.18870	2.18960	1.57580	HepG2	DKC1
SH3BP4	ENSG00000130147.11	2149.71690	2785.76130	-0.37390	5.74750	4.76610	HepG2	DNAJC21
SH3BP4	ENSG00000130147.11	2040.85790	3067.89510	-0.58810	5.07690	3.57430	HepG2	AGO1
SH3BP4	ENSG00000130147.11	2330.97370	3146.02290	-0.43260	5.86960	4.38360	HepG2	EIF3G
SH3BP4	ENSG00000130147.11	3148.60760	4986.46110	-0.66330	7.43820	6.38940	HepG2	EIF4A3
SH3BP4	ENSG00000130147.11	2965.47030	3987.20170	-0.42710	9.24700	7.88870	HepG2	EIF4G1
SH3BP4	ENSG00000130147.11	7510.84590	4472.63960	0.74770	9.91750	8.57860	HepG2	FIP1L1
SH3BP4	ENSG00000130147.11	1719.43420	2179.59450	-0.34210	2.76980	1.49930	HepG2	FKBP4
SH3BP4	ENSG00000130147.11	1738.23360	3641.61530	-1.06700	6.20870	4.68790	HepG2	FTO
SH3BP4	ENSG00000130147.11	2989.56990	3586.03210	-0.26250	2.46230	1.72040	HepG2	FUBP3
SH3BP4	ENSG00000130147.11	2341.66540	4667.54990	-0.99510	16.78780	15.21710	HepG2	G3BP1
SH3BP4	ENSG00000130147.11	3786.14970	4955.95370	-0.38840	3.63110	2.60350	HepG2	G3BP2
SH3BP4	ENSG00000130147.11	2700.06530	3152.08820	-0.22330	2.92660	1.92630	HepG2	HDGF
SH3BP4	ENSG00000130147.11	2970.88640	4727.65930	-0.67020	10.65890	9.36880	HepG2	HNRNPK
SH3BP4	ENSG00000130147.11	2649.10070	3107.63120	-0.23030	3.04630	2.41290	HepG2	HNRNPU
SH3BP4	ENSG00000130147.11	3548.59070	4744.25800	-0.41890	3.97300	3.17840	HepG2	IGF2BP2
SH3BP4	ENSG00000130147.11	3548.27510	3174.34530	0.16060	2.47490	1.77770	HepG2	ILF2
SH3BP4	ENSG00000130147.11	2487.36380	3623.20750	-0.54260	3.80770	2.22750	HepG2	ILF3
SH3BP4	ENSG00000130147.11	2177.20150	3542.85390	-0.70240	7.20780	5.19880	HepG2	KHDRBS1
SH3BP4	ENSG00000130147.11	2856.75240	4772.29530	-0.74030	7.83980	6.06650	HepG2	KHSRP
SH3BP4	ENSG00000130147.11	3537.85310	3018.07040	0.22910	3.93670	2.72500	HepG2	KIF1C
SH3BP4	ENSG00000130147.11	2974.70000	5249.28210	-0.81940	8.64650	6.48430	HepG2	KRR1
SH3BP4	ENSG00000130147.11	7280.05810	5547.98260	0.39190	2.66840	1.85290	HepG2	LARP4
SH3BP4	ENSG00000130147.11	2648.80120	5033.98480	-0.92640	15.76830	14.26430	HepG2	MAGOH
SH3BP4	ENSG00000130147.11	2509.38620	5061.98160	-1.01240	16.73890	15.28710	HepG2	MATR3
SH3BP4	ENSG00000130147.11	2896.79440	3618.98610	-0.32110	3.77030	2.82960	HepG2	MSI2
SH3BP4	ENSG00000130147.11	3837.06480	3039.08550	0.33630	3.27570	1.94940	HepG2	NAA15
SH3BP4	ENSG00000130147.11	2171.44470	5181.07510	-1.25460	26.68350	24.86300	HepG2	NCBP2
SH3BP4	ENSG00000130147.11	3452.24610	4978.29710	-0.52810	3.83850	2.16230	HepG2	NKRF
SH3BP4	ENSG00000130147.11	4942.17990	4007.46520	0.30240	4.04550	3.12340	HepG2	NOL12
SH3BP4	ENSG00000130147.11	3970.37020	3076.04430	0.36810	7.16810	5.90640	HepG2	PARN
SH3BP4	ENSG00000130147.11	2975.59000	4775.48720	-0.68250	24.29620	22.79670	HepG2	PCBP1
SH3BP4	ENSG00000130147.11	2456.00010	3565.12870	-0.53760	3.59450	2.41890	HepG2	PCBP2
SH3BP4	ENSG00000130147.11	2971.36670	3592.49650	-0.27390	1.96550	1.30550	HepG2	PRPF4
SH3BP4	ENSG00000130147.11	3356.54320	4859.32400	-0.53380	14.47960	13.42010	HepG2	PTBP1
SH3BP4	ENSG00000130147.11	2669.27630	3825.50740	-0.51920	7.57390	6.65140	HepG2	PUF60
SH3BP4	ENSG00000130147.11	4659.05760	4060.98150	0.19810	3.75630	3.08820	HepG2	PUM1
SH3BP4	ENSG00000130147.11	3124.97350	4057.99260	-0.37690	5.25780	4.34740	HepG2	PUM2
SH3BP4	ENSG00000130147.11	2564.29140	3363.03440	-0.39120	7.66070	6.71970	HepG2	PUS1
SH3BP4	ENSG00000130147.11	3557.61060	5262.58200	-0.56490	12.61500	11.42270	HepG2	QKI
SH3BP4	ENSG00000130147.11	4797.30200	3439.76210	0.47980	2.46080	1.79420	HepG2	RAVER1
SH3BP4	ENSG00000130147.11	3880.85410	4776.20160	-0.29950	3.17620	2.45890	HepG2	RBM25
SH3BP4	ENSG00000130147.11	2491.11550	3589.81360	-0.52710	3.75360	1.97520	HepG2	RBM47
SH3BP4	ENSG00000130147.11	3717.54010	5407.88860	-0.54070	15.85930	14.76520	HepG2	NELFE
SH3BP4	ENSG00000130147.11	3667.59540	5036.84470	-0.45770	11.87820	10.73550	HepG2	RECQL
SH3BP4	ENSG00000130147.11	6201.87550	4821.01660	0.36330	4.20020	3.38570	HepG2	RPLP0
SH3BP4	ENSG00000130147.11	3720.72610	2525.56600	0.55890	8.92490	7.89620	HepG2	RPS19
SH3BP4	ENSG00000130147.11	2690.46330	3733.39410	-0.47260	3.29100	2.41910	HepG2	RPS3A
SH3BP4	ENSG00000130147.11	2769.72290	1997.54530	0.47140	3.52870	2.65440	HepG2	RRP9
SH3BP4	ENSG00000130147.11	3190.47250	2767.49310	0.20510	2.96650	2.30490	HepG2	SAFB2
SH3BP4	ENSG00000130147.11	1704.99230	3893.29400	-1.19120	13.75650	12.30820	HepG2	SF3B1
SH3BP4	ENSG00000130147.11	3265.94000	5059.02710	-0.63140	21.26000	19.87590	HepG2	SF3B4
SH3BP4	ENSG00000130147.11	5047.28620	3668.14020	0.46040	15.91090	14.48220	HepG2	SLBP
SH3BP4	ENSG00000130147.11	4461.26720	3227.38160	0.46700	16.98660	15.59820	HepG2	SMN1
SH3BP4	ENSG00000130147.11	2788.98480	4331.91130	-0.63530	3.75840	2.84180	HepG2	SNRNP70
SH3BP4	ENSG00000130147.11	3094.79630	5280.59290	-0.77090	34.05850	32.80380	HepG2	SRSF1
SH3BP4	ENSG00000130147.11	6631.13860	4188.71460	0.66260	7.05430	5.40220	HepG2	SRSF3
SH3BP4	ENSG00000130147.11	4263.46760	3777.17510	0.17460	2.16460	1.60340	HepG2	SRSF5
SH3BP4	ENSG00000130147.11	3643.51740	4397.29240	-0.27130	3.54670	2.77260	HepG2	SRSF7
SH3BP4	ENSG00000130147.11	2932.20790	4296.09850	-0.55100	17.16540	16.00170	HepG2	SRSF9
SH3BP4	ENSG00000130147.11	2326.29890	4527.70010	-0.96070	25.24150	24.04040	HepG2	SSB
SH3BP4	ENSG00000130147.11	2249.49170	3248.24700	-0.53010	4.15350	2.78010	HepG2	STIP1
SH3BP4	ENSG00000130147.11	2679.83680	4746.57990	-0.82470	27.04730	25.53070	HepG2	TAF15
SH3BP4	ENSG00000130147.11	2750.42700	3832.90430	-0.47880	3.26770	2.48660	HepG2	TARDBP
SH3BP4	ENSG00000130147.11	3075.45300	5140.85040	-0.74120	3.82440	2.58030	HepG2	TBRG4
SH3BP4	ENSG00000130147.11	3060.58490	4361.27230	-0.51090	8.50400	7.04780	HepG2	TIA1
SH3BP4	ENSG00000130147.11	1829.72480	3019.70860	-0.72280	16.09230	15.06530	HepG2	TIAL1
SH3BP4	ENSG00000130147.11	5128.67300	3956.03760	0.37440	3.24590	2.33960	HepG2	UBE2L3
SH3BP4	ENSG00000130147.11	2310.25360	3793.79540	-0.71560	23.18640	21.55310	HepG2	UPF1
SH3BP4	ENSG00000130147.11	1620.02800	2386.39510	-0.55880	4.67400	3.34950	HepG2	UPF2
SH3BP4	ENSG00000130147.11	3268.48060	3662.75520	-0.16430	1.81950	1.31150	HepG2	UTP3
SH3BP4	ENSG00000130147.11	2479.12820	3344.10850	-0.43180	2.65030	1.58220	HepG2	XPO5
SH3BP4	ENSG00000130147.11	1942.04550	2566.07830	-0.40200	4.12490	3.24780	HepG2	XRN2
SH3BP4	ENSG00000130147.11	2975.65940	3545.15580	-0.25260	2.50540	1.86090	HepG2	ZC3H8
SH3BP4	ENSG00000130147.11	5107.16170	4172.44390	0.29150	7.37950	6.59760	HepG2	ZNF622
SH3BP4	ENSG00000130147.11	2.72390	19.01260	-2.80320	2.95040	2.18410	K562	NSUN2
SH3BP4	ENSG00000130147.11	1.38000	18.76160	-3.76510	3.99350	3.02250	K562	SF3A3
SH3BP4	ENSG00000130147.11	0.00000	20.15950	-99999.99999	6.64450	5.58530	K562	UPF1
SH3BP4	ENSG00000130147.11	1.00420	17.24970	-4.10250	3.92690	2.87830	K562	WDR3
SH3BP4	ENSG00000130147.11	0.48140	17.93830	-5.21970	4.96950	3.86510	K562	WDR43
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SH3BP4 is not available on ENCORE database.

2 RBPs can affect the splicing of SH3BP4 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	SH3BP4	ENSG00000130147.11	chr2	+	235949531	235951891			235943514	235943764	235961205	235961394	-0.08900	0.00000	0.00096	excluded	HepG2	DDX6
SE	SH3BP4	ENSG00000130147.11	chr2	+	235949531	235951891			235943514	235943764	235961205	235961394	-0.05300	0.00257	0.09376	excluded	HepG2	SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SH3BP4

General Information

Functions

Localization

Domains (AlphaFold: SH3BP4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SH3BP4 is not avaliable on ENCORE database.

46 proteins are bound to SH3BP4 RNA:

eCLIP assay for SH3BP4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SH3BP4 is not available on ENCORE database.

96 RBPs can affect the gene expression of SH3BP4 :

The Knockdown/knockout RNA-Seq assay for SH3BP4 is not available on ENCORE database.

2 RBPs can affect the splicing of SH3BP4 :

The Knockdown/knockout RNA-Seq assay for SH3BP4 is not avaliable on ENCORE database.