SF3A2

General Information

Gene Name       : SF3A2
Gene ID             : ENSG00000104897.9
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: SF3A2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SF3A2ENSG00000104897.91.5218.309.91ENCSR000AEF
HepG2SF3A2ENSG00000104897.935.429.0822.25ENCSR985KAT
K562SF3A2ENSG00000104897.986.2530.0158.13ENCSR000AEO

Assays

2 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
knockdown followed by RNA-seq SF3A2-BGKcLV21-K562ENCSR095TFWSF3A2K562ReleasedENCSR854OFV   CRISPRKD% = 55.6,66.3
knockdown followed by RNA-seq SF3A2-BGHcLV24-HepG2ENCSR402BZZSF3A2HepG2ReleasedENCSR671FDZ   CRISPRKD% = 55.0,52.0






  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
SF3A2ENCAB309KDWA304-821A1BGHcLV24-47, Released, ENCODE4BGKcLV21-41, NotSatisfied, ENCODE4


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
SF3A2K562CRISPRENCSR095TFWENCSR854OFVSF3A2-BGKcLV21-41,SF3A2-BGKcLV21-42NT-BGKcLV21-1,NT-BGKcLV21-255.6,66.3ReleasedENCODE4
SF3A2HepG2CRISPRBGHcLV22-51,BGHcLV22-52BGHcLV22-1,BGHcLV22-235.3,28.3NotSatisfiedENCODE4
SF3A2HepG2CRISPRENCSR402BZZENCSR671FDZSF3A2-BGHcLV24-47,SF3A2-BGHcLV24-48NT-BGHcLV24-1,NT-BGHcLV24-255.0,52.0ReleasedENCODE4


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
SF3A2Product_ID: A304-821A
Lot_ID: 1
Source: Bethyl Labs
Target Name: SF3A2-human		 SF3A2-HEPG2-CRISPR-A304-821A.png<br>Caption: Western blot following CRISPR against SF3A2 in HepG2 whole cell lysate using SF3A2 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against SF3A2. SF3A2 protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.
 SF3A2-K562-CRISPR-A304-821A.png<br>Caption: Western blot following CRISPR against SF3A2 in K562 whole cell lysate using SF3A2 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against SF3A2. SF3A2 protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.








RNA Targets

  • eCLIP assay for SF3A2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SF3A2 RNA is bound by 28 proteins.  







eCLIP assay for SF3A2 is not avaliable on ENCORE database.





28 proteins are bound to SF3A2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1922485242248597+3'-UTR,CDS3.003549.71278K562IGF2BP2
chr1922485592248618+3'-UTR3.387055.81842K562PTBP1
chr1922485382248625+3'-UTR,CDS5.3542440.07804K562HNRNPK
chr1922485372248597+3'-UTR,CDS4.259834.62831HepG2PCBP2
chr1922485412248594+3'-UTR,CDS5.6699518.88581HepG2DDX59
chr1922485432248599+3'-UTR4.658285.87141HepG2HNRNPK
chr1922485852248649+3'-UTR4.9187520.44705K562PABPC4
chr1922485332248586+3'-UTR,CDS4.8786728.84245K562PCBP1
chr1922485302248635+3'-UTR,CDS3.485235.79126HepG2LARP4
chr1922368462236901+5'-UTR,intron-Proximal3.141323.33365K562DDX3X
chr1922482222248294+CDS5.7869245.16242K562PCBP1
chr1922482252248333+CDS5.4069530.32828HepG2DDX59
chr1922446482244752+CDS,intron-Proximal3.9149312.31390HepG2EFTUD2
chr1922455532245557+CDS,intron-Proximal4.5567549.36336K562AQR
chr1922453712245457+CDS,intron-Proximal4.1541618.89880K562SF3B4
chr1922470092247061+CDS,intron-Proximal3.3796811.72614HepG2PRPF8
chr1922454712245492+CDS3.098418.41462K562YBX3
chr1922481492248235+CDS4.6024537.69506K562HNRNPK
chr1922455102245594+CDS,intron-Proximal3.791177.91657HepG2PPIG
chr1922447592244778+CDS4.7382718.70653K562YBX3
chr1922483042248352+CDS5.9286329.50790K562HNRNPK
chr1922445772244601+CDS3.577899.11396K562YBX3
chr1922483842248466+CDS4.0017010.41756K562PTBP1
chr1922483942248478+CDS4.9253233.19564K562HNRNPK
chr1922482942248365+CDS5.0765443.75855K562PCBP1
chr1922467822246793+CDS3.6638212.16908K562YBX3
chr1922483522248394+CDS5.5565621.80350K562HNRNPK
chr1922445502244575+CDS3.402904.58459K562GRWD1
chr1922447312244757+CDS,intron-Proximal3.208558.05533K562DDX24
chr1922470172247028+CDS,intron-Proximal3.6467415.97737K562AQR
chr1922476272247664+CDS,intron-Proximal4.034063.39325K562SRSF1
chr1922469152246930+CDS3.1985821.53282K562YBX3
chr1922479832248030+CDS4.7049230.31201K562PCBP1
chr1922445432244614+CDS3.7849017.98868K562DDX24
chr1922483512248456+CDS3.7067937.25438K562DROSHA
chr1922484612248524+CDS3.078835.75289K562IGF2BP2
chr1922467342246842+CDS,intron-Proximal3.9531614.09634HepG2PRPF8
chr1922484622248537+CDS4.132423.15612HepG2PCBP2
chr1922445462244577+CDS3.210859.81338K562YBX3
chr1922445432244604+CDS3.0108112.23368K562UCHL5
chr1922480672248165+CDS5.5776228.84548HepG2DDX59
chr1922480562248258+CDS4.9182032.53638HepG2HNRNPK
chr1922480352248163+CDS4.738925.76537HepG2PCBP2
chr1922469372247009+CDS3.138305.08732HepG2PPIG
chr1922446122244655+CDS,intron-Proximal5.016275.35117HepG2PRPF8
chr1922483772248448+CDS5.3046711.09144HepG2HNRNPK
chr1922468892247001+CDS3.8361612.63597K562METAP2
chr1922481572248222+CDS3.8537222.42415K562PCBP1
chr1922454442245460+CDS,intron-Proximal3.266284.65103K562METAP2
chr1922478982247983+CDS4.0422233.80178K562PCBP1
chr1922467682246798+CDS3.297837.55422K562METAP2
chr1922454882245582+CDS,intron-Proximal3.2348713.73753K562UCHL5
chr1922445592244599+CDS3.060626.24568K562PUM1
chr1922480562248208+CDS3.670025.56088HepG2PABPN1
chr1922480852248216+CDS3.0240823.83268K562DROSHA
chr1922454442245471+CDS,intron-Proximal4.0966513.91952K562YBX3
chr1922484782248538+CDS4.3529522.11899K562HNRNPK
chr1922479012247974+CDS4.9779618.20967HepG2DDX59
chr1922482582248359+CDS5.5386812.67208HepG2HNRNPK
chr1922447312244761+CDS,intron-Proximal3.153437.74926K562UCHL5
chr1922468822246915+CDS3.1307916.75900K562YBX3
chr1922481352248274+CDS3.2039112.81048K562IGF2BP2
chr1922479022247957+CDS3.373428.71634K562HNRNPK
chr1922467222246844+CDS,intron-Proximal3.3898424.68586K562AQR
chr1922480562248107+CDS6.0555134.34180K562HNRNPK
chr1922447352244759+CDS3.475618.98498K562YBX3
chr1922480302248153+CDS4.6361475.61982K562PCBP1
chr1922484772248530+CDS3.320364.48159HepG2LARP4
chr1922482422248351+CDS3.4318125.92187K562DROSHA
chr1922483932248446+CDS4.943946.66940HepG2LARP4
chr1922446012244608+CDS3.460247.79660K562YBX3
chr1922482352248304+CDS5.2277937.99559K562HNRNPK
chr1922467862246866+CDS,intron-Proximal3.2415421.58744K562PRPF8
chr1922455472245599+CDS,intron-Proximal3.6634613.82962HepG2PRPF8
chr1922478592247942+CDS3.161455.96568HepG2GRWD1
chr1922479912248032+CDS4.8869315.14946K562HNRNPK
chr1922484682248534+CDS4.7527420.74189HepG2DDX59
chr1922483742248455+CDS5.0087725.47237HepG2DDX59
chr1922481652248225+CDS5.0517818.98099HepG2DDX59
chr1922445582244595+CDS3.002815.48278K562MTPAP
chr1922481072248128+CDS5.2205127.46243K562HNRNPK
chr1922483652248504+CDS5.85522400.00000K562PCBP1
chr1922460292246072+intron-Distal3.405208.10543K562UCHL5
chr1922458462245898+intron-Distal3.465354.65362K562RBFOX2
chr1922462212246273+intron-Distal3.9874411.86893K562DDX24
chr1922369452237005+intron-Distal,intron-Proximal5.748777.41664HepG2EFTUD2
chr1922461602246218+intron-Distal3.795467.50303K562UCHL5
chr1922461742246210+intron-Distal3.161813.50009K562CSTF2T
chr1922461602246224+intron-Distal4.1191616.05612K562AQR
chr1922458642245883+intron-Distal3.927166.06009K562BUD13
chr1922460132246068+intron-Distal4.6339811.07360K562BUD13
chr1922461582246220+intron-Distal3.3010910.79412K562BUD13
chr1922416952241762+intron-Distal4.229263.53896K562NONO
chr1922462212246273+intron-Distal3.689815.84546K562RBFOX2
chr1922446792244730+intron-Proximal4.964486.39664HepG2SF3B4
chr1922468212246854+intron-Proximal3.180536.76881K562BUD13
chr1922466822246723+intron-Proximal3.453818.55260K562BUD13
chr1922455572245597+intron-Proximal6.2836559.35188K562AQR
chr1922466842246730+intron-Proximal4.659954.28193HepG2AQR
chr1922470262247049+intron-Proximal4.100915.28701K562PRPF8
chr1922470482247077+intron-Proximal5.8854123.92744K562AQR
chr1922446452244668+intron-Proximal3.635773.09782K562EFTUD2
chr1922435442243587+intron-Proximal4.473855.63763K562AQR
chr1922470282247048+intron-Proximal5.5770719.62251K562AQR
chr1922447932244820+intron-Proximal5.530168.43521K562AQR
chr1922456142245643+intron-Proximal3.202256.45164K562BUD13
chr1922455682245590+intron-Proximal5.124757.81134HepG2AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SF3A2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SF3A2 is not available on ENCORE database.

  • 113 RBPs can affect the levels of SF3A2.  








The Knockdown/knockout RNA-Seq assay for SF3A2 is not available on ENCORE database.





113 RBPs can affect the gene expression of SF3A2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SF3A2ENSG00000104897.5698.59450826.35380-0.242301.988101.45660HepG2ACO1
SF3A2ENSG00000104897.5392.69580694.52720-0.822603.329802.49340HepG2CALR
SF3A2ENSG00000104897.51470.703601028.761700.515505.533704.00810HepG2CPSF7
SF3A2ENSG00000104897.5378.39830262.826500.525703.662902.49240HepG2YBX3
SF3A2ENSG00000104897.5167.04380358.74010-1.102703.089701.62680HepG2CSTF2T
SF3A2ENSG00000104897.5269.76450385.68780-0.515702.213901.60020HepG2DDX21
SF3A2ENSG00000104897.5212.66170377.92450-0.829503.734902.66330HepG2DDX24
SF3A2ENSG00000104897.5460.42240258.067000.835104.084103.24290HepG2DNAJC21
SF3A2ENSG00000104897.5569.27400255.801201.1540021.7572020.08540HepG2DNAJC2
SF3A2ENSG00000104897.5184.66290355.58330-0.945302.950401.80080HepG2AGO1
SF3A2ENSG00000104897.5674.01320426.352000.660602.556501.43540HepG2FAM120A
SF3A2ENSG00000104897.5975.98800542.219000.847901.941001.35010HepG2HNRNPK
SF3A2ENSG00000104897.5846.12710410.564901.043208.255407.14730HepG2HNRNPL
SF3A2ENSG00000104897.5655.78360287.890001.1876023.0399021.42200HepG2HNRNPU
SF3A2ENSG00000104897.5487.40430294.069400.728909.142007.88770HepG2ILF2
SF3A2ENSG00000104897.5667.33100383.858100.797702.983001.73730HepG2KHDRBS1
SF3A2ENSG00000104897.5454.50840295.848100.619403.841902.49870HepG2LARP7
SF3A2ENSG00000104897.5824.687601020.87410-0.307902.437401.67610HepG2MSI2
SF3A2ENSG00000104897.5872.30200446.933100.9647016.7655014.98190HepG2NOL12
SF3A2ENSG00000104897.5644.71470259.635901.312104.529602.71300HepG2NOLC1
SF3A2ENSG00000104897.5857.21720367.791301.2207010.069608.34240HepG2PABPC1
SF3A2ENSG00000104897.5864.48390543.406200.669706.696205.81470HepG2PCBP1
SF3A2ENSG00000104897.5671.29950256.774101.386408.415107.17930HepG2PPIL4
SF3A2ENSG00000104897.5480.49210735.51800-0.614204.721103.74000HepG2PRPF4
SF3A2ENSG00000104897.5694.74940426.642000.703407.264606.35720HepG2PUF60
SF3A2ENSG00000104897.5884.99550452.905400.9664012.0383010.98450HepG2PUM1
SF3A2ENSG00000104897.5919.60720452.570801.022802.504701.86610HepG2PUM2
SF3A2ENSG00000104897.5701.50570356.763300.975409.595407.72970HepG2RBM27
SF3A2ENSG00000104897.5593.61920289.709401.034808.750706.87250HepG2RCC2
SF3A2ENSG00000104897.5794.48520615.386100.368402.052101.57110HepG2NELFE
SF3A2ENSG00000104897.5759.90760573.262200.406501.985901.45140HepG2RECQL
SF3A2ENSG00000104897.5461.42910648.67830-0.491402.308301.67590HepG2RPLP0
SF3A2ENSG00000104897.5465.46470328.998000.500502.430601.67700HepG2RPS2
SF3A2ENSG00000104897.5547.12640335.870400.703904.854303.41930HepG2RPS5
SF3A2ENSG00000104897.5644.34870256.376201.3295015.2910013.95960HepG2SAFB2
SF3A2ENSG00000104897.5758.45140380.853800.993704.247202.63330HepG2SART3
SF3A2ENSG00000104897.5888.87930379.394601.228204.262302.50040HepG2SF1
SF3A2ENSG00000104897.51862.101301121.438100.731506.690305.61230HepG2SF3A3
SF3A2ENSG00000104897.5745.73020575.621200.373401.848201.34870HepG2SF3B4
SF3A2ENSG00000104897.5755.90960368.355501.037002.921501.42140HepG2SFPQ
SF3A2ENSG00000104897.5733.58870409.095600.8424010.082608.87430HepG2SLBP
SF3A2ENSG00000104897.5437.04070298.973700.547604.932204.11320HepG2SMN1
SF3A2ENSG00000104897.5647.52670333.859400.955602.462601.56270HepG2SMNDC1
SF3A2ENSG00000104897.5660.55330339.259800.961202.938301.57880HepG2SNRNP200
SF3A2ENSG00000104897.5315.48200600.87910-0.929504.490103.92360HepG2SRSF1
SF3A2ENSG00000104897.5727.58230421.254100.7883012.0355010.85620HepG2SRSF5
SF3A2ENSG00000104897.5637.84420352.046900.857303.878602.55250HepG2STIP1
SF3A2ENSG00000104897.5825.69750479.075700.785307.333706.40220HepG2SUCLG1
SF3A2ENSG00000104897.51051.60780851.733100.304002.144901.31030HepG2SUPT6H
SF3A2ENSG00000104897.5204.20180540.24670-1.403606.380505.58910HepG2TAF15
SF3A2ENSG00000104897.5638.14960282.240601.1769022.1489020.74670HepG2TRIM56
SF3A2ENSG00000104897.5801.94200416.821100.944004.460103.31970HepG2TUFM
SF3A2ENSG00000104897.51477.434701079.180700.453103.725502.99970HepG2U2AF1
SF3A2ENSG00000104897.5772.97790394.380900.970702.842001.83930HepG2U2AF2
SF3A2ENSG00000104897.5922.34830441.205001.0638011.9178010.14030HepG2UBE2L3
SF3A2ENSG00000104897.5769.32290994.55010-0.370502.143801.51650HepG2UPF1
SF3A2ENSG00000104897.51234.18860960.190000.362101.979201.45520HepG2UTP3
SF3A2ENSG00000104897.56630.523904062.534300.7066027.9402026.23680K562AGGF1
SF3A2ENSG00000104897.52122.776901678.007200.339104.616902.62750K562AKAP1
SF3A2ENSG00000104897.55745.578304464.364500.363904.261502.98620K562AKAP8
SF3A2ENSG00000104897.55613.891504227.313500.409201.982601.42780K562AKAP8L
SF3A2ENSG00000104897.53505.421202500.482000.487305.273004.50790K562AQR
SF3A2ENSG00000104897.55527.356104435.587200.317403.221202.23080K562ATP5C1
SF3A2ENSG00000104897.51594.30390925.744800.784102.969001.60100K562BCCIP
SF3A2ENSG00000104897.51908.12650894.722401.0925025.3382022.58400K562BCLAF1
SF3A2ENSG00000104897.51614.602201268.160800.348302.624001.77560K562BOP1
SF3A2ENSG00000104897.53193.514201656.300000.947103.271902.10490K562CCAR1
SF3A2ENSG00000104897.51931.472101348.373300.518402.882502.08390K562CPSF6
SF3A2ENSG00000104897.51524.51400678.780601.1672018.7514015.76680K562CSTF2
SF3A2ENSG00000104897.53671.922903041.549500.271602.463901.32480K562DDX21
SF3A2ENSG00000104897.51319.31800784.317300.750206.503604.48500K562DDX27
SF3A2ENSG00000104897.52164.620601723.849900.328404.111402.42470K562DDX6
SF3A2ENSG00000104897.55443.469104548.501200.259003.926702.85990K562DKC1
SF3A2ENSG00000104897.52040.67840875.552401.220706.553905.10130K562EFTUD2
SF3A2ENSG00000104897.52538.972101756.680300.531306.027705.02730K562EIF2S2
SF3A2ENSG00000104897.52147.787301599.722000.424906.222004.36920K562EIF4B
SF3A2ENSG00000104897.52047.214901550.592000.400702.604601.35620K562EWSR1
SF3A2ENSG00000104897.53013.126601954.668200.624206.869904.83360K562EXOSC5
SF3A2ENSG00000104897.52206.688101708.527700.369003.094902.19480K562FIP1L1
SF3A2ENSG00000104897.51409.237201847.34770-0.390505.440604.63200K562FXR1
SF3A2ENSG00000104897.582.76530371.33370-2.165606.310105.14380K562G3BP2
SF3A2ENSG00000104897.51983.824001287.328300.623808.707607.29190K562GPKOW
SF3A2ENSG00000104897.54479.128302786.487500.684703.403102.00410K562HNRNPA2B1
SF3A2ENSG00000104897.52055.324801473.344600.480201.945401.43370K562HNRNPC
SF3A2ENSG00000104897.54019.974502799.227600.522107.031705.60540K562HNRNPU
SF3A2ENSG00000104897.51865.06610728.821401.355503.389302.20980K562IGF2BP2
SF3A2ENSG00000104897.51276.42290741.068700.784303.961702.48040K562IGF2BP3
SF3A2ENSG00000104897.51581.00090765.365601.046507.626706.20580K562MAGOH
SF3A2ENSG00000104897.55477.568004294.400000.351004.457602.99860K562MAK16
SF3A2ENSG00000104897.51093.13160763.722100.517202.578801.69020K562MATR3
SF3A2ENSG00000104897.56182.216705025.503400.298803.590902.53440K562MBNL1
SF3A2ENSG00000104897.51996.496401256.591400.6679010.303708.54260K562METAP2
SF3A2ENSG00000104897.54687.627503564.289700.3951014.1746012.66970K562NSUN2
SF3A2ENSG00000104897.52404.854101451.849000.728002.954801.46630K562NUSAP1
SF3A2ENSG00000104897.54557.745602437.347500.902905.514103.98270K562PABPN1
SF3A2ENSG00000104897.51335.35220748.424300.8352010.786108.13280K562PCBP1
SF3A2ENSG00000104897.51091.61060680.876800.680903.273302.20770K562PCBP2
SF3A2ENSG00000104897.52639.080701939.757000.444102.703101.89380K562PPIG
SF3A2ENSG00000104897.54893.952502897.695700.756003.546101.82720K562PPP1R8
SF3A2ENSG00000104897.51578.84850852.033200.889802.241601.56270K562PRPF8
SF3A2ENSG00000104897.52075.487701321.225100.651502.751701.85030K562PSIP1
SF3A2ENSG00000104897.51289.33580743.645200.793804.878904.02090K562PTBP1
SF3A2ENSG00000104897.52498.330803947.45570-0.660006.349904.67840K562PUM1
SF3A2ENSG00000104897.56043.285604191.889600.527605.589904.84990K562PUS1
SF3A2ENSG00000104897.53243.886101767.565400.875903.897101.59360K562RBFOX2
SF3A2ENSG00000104897.55579.184304084.734000.449705.420404.61530K562RBM15
SF3A2ENSG00000104897.51077.08300712.740800.595603.766102.77290K562RBM22
SF3A2ENSG00000104897.51964.510601206.493500.703203.984402.79170K562RCC2
SF3A2ENSG00000104897.51679.060801314.594000.352902.266301.37060K562RPS3
SF3A2ENSG00000104897.53324.052802081.189900.675402.902001.34250K562SBDS
SF3A2ENSG00000104897.5723.52480385.589000.907902.913702.03520K562SF3B4
SF3A2ENSG00000104897.53185.212802138.840900.574503.989201.87730K562SMN1
SF3A2ENSG00000104897.5278.92250491.36350-0.816904.455002.31940K562SND1
SF3A2ENSG00000104897.52336.119601143.615101.030404.516003.11680K562SRFBP1
SF3A2ENSG00000104897.51364.74360729.087300.9044010.461109.10090K562SRSF1
SF3A2ENSG00000104897.52658.670101268.816001.0671026.6700022.97600K562SRSF4
SF3A2ENSG00000104897.51527.94160688.733901.149509.932107.79870K562SRSF5
SF3A2ENSG00000104897.51730.77790823.935301.070702.619801.63290K562SUPV3L1
SF3A2ENSG00000104897.51738.88180737.739401.236906.905605.73780K562TARDBP
SF3A2ENSG00000104897.51789.77310711.670901.3304016.8868014.72540K562TIA1
SF3A2ENSG00000104897.51596.71460698.702801.192305.222003.62610K562TRA2A
SF3A2ENSG00000104897.52564.102201351.091300.924202.906201.93310K562TRIM56
SF3A2ENSG00000104897.54369.317203779.296800.209203.040302.28810K562UPF1
SF3A2ENSG00000104897.51721.11480889.295300.952502.473101.35000K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SF3A2 is not available on ENCORE database.





11 RBPs can affect the splicing of SF3A2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
RISF3A2ENSG00000104897.5chr19+2245444224583722454442245554224576222458370.064000.013700.07375includedK562PUS1
RISF3A2ENSG00000104897.5chr19+2246751224702122467512246801224688022470210.110000.000040.00097includedHepG2SF3A3
RISF3A2ENSG00000104897.5chr19+2246751224702122467512246801224688022470210.155000.000130.00575includedHepG2UCHL5
RISF3A2ENSG00000104897.5chr19+2246751224702122467512246801224688022470210.059000.009700.09272includedK562PRPF8
RISF3A2ENSG00000104897.5chr19+2246751224702122467512246801224688022470210.156000.000180.00731includedHepG2FTO
RISF3A2ENSG00000104897.5chr19+2246751224702122467512246801224688022470210.073000.000360.00459includedK562AKAP8L
RISF3A2ENSG00000104897.5chr19+224675122470212246751224680122468802247021-0.054000.000230.06629excludedK562PUM2
RISF3A2ENSG00000104897.5chr19+2246751224702122467512246801224688022470210.060000.007980.07220includedHepG2NCBP2
RISF3A2ENSG00000104897.5chr19+2246751224702122467512246801224688022470210.072000.005880.09502includedHepG2PTBP1
RISF3A2ENSG00000104897.5chr19+2246751224702122467512246801224688022470210.058000.008150.06862includedK562EFTUD2
RISF3A2ENSG00000104897.5chr19+2246751224702122467512246801224688022470210.128000.000000.00000includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SF3A2 is not avaliable on ENCORE database.