PRG2

General Information

Gene Name       : PRG2
Gene ID             : ENSG00000186652.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PRG2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PRG2ENSG00000186652.90.000.070.04ENCSR000AEF
HepG2PRG2ENSG00000186652.90.000.000.00ENCSR985KAT
K562PRG2ENSG00000186652.916.8516.3816.62ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PRG2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PRG2 RNA is bound by 6 proteins.  







eCLIP assay for PRG2 is not avaliable on ENCORE database.





6 proteins are bound to PRG2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr115715491057154957-3'-UTR,CDS,intron-Distal,intron-Proximal5.2484615.28994K562PABPC4
chr115715486457154969-3'-UTR,CDS,intron-Distal,intron-Proximal5.6605914.80770K562PCBP1
chr115715485357154910-3'-UTR,intron-Distal,intron-Proximal5.074738.54578K562PABPC4
chr115715806757158076-5'-UTR,intron-Distal6.4777311.81471K562DDX3X
chr115715807657158121-5'-UTR,intron-Distal,intron-Proximal5.8042311.81272K562DDX3X
chr115715740257157431-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.254736.20524K562DDX3X
chr115715650057156567-CDS,intron-Distal,intron-Proximal3.9804810.93738K562SND1
chr115715735957157389-3'-UTR,CDS,intron-Distal,intron-Proximal3.165183.88816K562YBX3
chr115715613257156181-CDS,intron-Distal3.894616.16634K562SND1
chr115715656757156591-CDS,intron-Distal,intron-Proximal4.018944.06913K562SND1
chr115715604957156060-CDS,intron-Distal,intron-Proximal3.829204.05642K562SND1
chr115715522857155247-CDS,intron-Distal4.2709111.14938K562SND1
chr115715659157156607-CDS,intron-Distal,intron-Proximal4.022363.49912K562SND1
chr115715606057156072-CDS,intron-Distal3.419923.14815K562SND1
chr115715671157156777-3'-UTR,CDS,intron-Distal4.781466.97927K562DDX3X
chr115715532757155338-CDS,intron-Distal3.786243.95032K562SND1
chr115715529357155327-CDS,intron-Distal4.144698.77913K562SND1
chr115715663157156746-3'-UTR,CDS,intron-Distal3.6246211.01265K562DDX55
chr115715660757156652-3'-UTR,CDS,intron-Distal,intron-Proximal4.102504.63566K562SND1
chr115715524757155293-CDS,intron-Distal4.4355317.94409K562SND1
chr115715735857157395-3'-UTR,CDS,intron-Distal,intron-Proximal4.194134.24836K562DDX3X
chr115715677757156790-3'-UTR,CDS,intron-Distal4.057363.94428K562DDX3X
chr115715658757156721-3'-UTR,CDS,intron-Distal,intron-Proximal5.9137623.59120K562PABPC4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PRG2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PRG2 is not available on ENCORE database.

  • 122 RBPs can affect the levels of PRG2.  








The Knockdown/knockout RNA-Seq assay for PRG2 is not available on ENCORE database.





122 RBPs can affect the gene expression of PRG2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PRG2ENSG00000186652.576.60250505.27190-2.7216047.3047043.42860K562AARS
PRG2ENSG00000186652.51439.06910879.776100.709804.071202.56270K562ABCF1
PRG2ENSG00000186652.51698.46000278.324702.6093021.9632017.90840K562ADAR
PRG2ENSG00000186652.5852.39610358.536101.2493028.9372025.05200K562AKAP1
PRG2ENSG00000186652.5415.26960166.064401.322205.850204.87810K562AKAP8L
PRG2ENSG00000186652.5927.03040411.873901.1703010.173009.15600K562AQR
PRG2ENSG00000186652.5503.44100174.217001.5308021.2357018.51970K562ATP5C1
PRG2ENSG00000186652.5326.544101007.91920-1.6260045.4349041.75860K562BCCIP
PRG2ENSG00000186652.51895.98510973.915800.9610031.3588028.34310K562BCLAF1
PRG2ENSG00000186652.5921.57320612.913200.588303.302301.71930K562BUD13
PRG2ENSG00000186652.5610.56500272.620401.163202.997501.89360K562CCAR1
PRG2ENSG00000186652.51530.118501019.602400.585503.555901.88880K562CKAP4
PRG2ENSG00000186652.51015.45230556.674300.867106.748205.51640K562CPSF6
PRG2ENSG00000186652.5869.60080297.677601.546503.623601.47990K562YBX3
PRG2ENSG00000186652.53172.856801754.316900.8548022.6287020.20080K562CELF1
PRG2ENSG00000186652.5131.85390273.75460-1.053904.607402.19820K562DAZAP1
PRG2ENSG00000186652.5318.90460854.10320-1.4213036.0048032.48490K562DDX27
PRG2ENSG00000186652.5365.05530859.05610-1.2346028.3635026.48830K562DDX47
PRG2ENSG00000186652.5594.72430368.324900.691108.000505.50640K562DDX6
PRG2ENSG00000186652.5481.61750178.778401.4296013.5651011.30740K562DKC1
PRG2ENSG00000186652.51168.75260293.118201.995309.809307.47240K562DNAJC21
PRG2ENSG00000186652.51614.90340310.686502.3778033.3068029.24560K562DNAJC2
PRG2ENSG00000186652.5484.62910719.17110-0.569504.640903.44330K562EFTUD2
PRG2ENSG00000186652.5514.47020399.037700.366502.660801.48130K562EIF2S1
PRG2ENSG00000186652.5416.79950753.73330-0.854704.452403.56740K562EIF2S2
PRG2ENSG00000186652.51415.384701989.27380-0.491004.394401.91230K562EIF3H
PRG2ENSG00000186652.5146.41910379.54490-1.3742015.3473013.31310K562EIF4A3
PRG2ENSG00000186652.56856.735101426.998702.2644081.2677077.32930K562EIF4G2
PRG2ENSG00000186652.51139.47990327.024101.800805.343403.54330K562EXOSC5
PRG2ENSG00000186652.5313.51430632.57280-1.012704.211703.14980K562FIP1L1
PRG2ENSG00000186652.5148.16750479.90830-1.6955020.9752017.81680K562FKBP4
PRG2ENSG00000186652.5967.90030480.276001.010904.561303.36000K562FTO
PRG2ENSG00000186652.585.55040394.71050-2.2059035.4408033.40870K562FXR1
PRG2ENSG00000186652.553.60120134.03040-1.322204.032001.45020K562FXR2
PRG2ENSG00000186652.51347.66080721.029400.9022011.631608.76580K562GEMIN5
PRG2ENSG00000186652.5858.80010523.119500.715105.355803.79700K562GLRX3
PRG2ENSG00000186652.51092.42590531.422901.039507.307506.01670K562GPKOW
PRG2ENSG00000186652.5570.855201004.23860-0.814904.293503.35590K562GRSF1
PRG2ENSG00000186652.587.80070236.60350-1.430207.674404.49760K562HLTF
PRG2ENSG00000186652.51284.39400471.842001.444606.262403.93700K562HNRNPAB
PRG2ENSG00000186652.598.60360552.99020-2.4875045.9764043.66480K562HNRNPC
PRG2ENSG00000186652.5238.32320493.76750-1.0509011.052708.75560K562HNRNPF
PRG2ENSG00000186652.5627.30290307.674301.0277010.930108.46610K562HNRNPK
PRG2ENSG00000186652.53376.18830776.323602.1206020.6759017.81470K562HNRNPL
PRG2ENSG00000186652.5309.12640520.38730-0.751402.617401.71430K562HNRNPM
PRG2ENSG00000186652.5257.92610972.97310-1.9154022.4229020.02820K562HNRNPU
PRG2ENSG00000186652.5621.52630298.237401.059304.360401.65660K562HNRNPUL1
PRG2ENSG00000186652.52283.037601162.516700.973604.651602.30370K562IGF2BP1
PRG2ENSG00000186652.5114.16610313.43350-1.4570012.7152010.00680K562IGF2BP3
PRG2ENSG00000186652.52319.69690461.099002.330708.953506.41060K562ILF2
PRG2ENSG00000186652.51047.49680284.917001.8782015.7939012.67610K562ILF3
PRG2ENSG00000186652.5165.19460311.43980-0.914805.853303.14880K562KHSRP
PRG2ENSG00000186652.5374.84270176.281201.088302.417901.65390K562KIF1C
PRG2ENSG00000186652.5232.68210535.34070-1.2021015.0422012.00470K562LARP7
PRG2ENSG00000186652.5173.43670560.74430-1.6929024.3441020.58300K562LIN28B
PRG2ENSG00000186652.5117.55440323.78940-1.4617016.3445014.16250K562MAGOH
PRG2ENSG00000186652.5224.10700323.11490-0.527903.177802.18380K562MATR3
PRG2ENSG00000186652.51311.42850518.755101.3379024.9009022.26070K562METAP2
PRG2ENSG00000186652.5566.795901521.08490-1.4242031.2461028.10290K562MSI2
PRG2ENSG00000186652.5154.24210378.99940-1.2970014.2771011.64380K562NCBP2
PRG2ENSG00000186652.5960.13270247.251701.9572019.4885015.42490K562NFX1
PRG2ENSG00000186652.51825.38460708.907301.3644026.5811022.91390K562NONO
PRG2ENSG00000186652.52624.88140611.177502.1025043.0670040.72720K562NSUN2
PRG2ENSG00000186652.54792.81340483.990703.3077031.0485027.24410K562PABPC1
PRG2ENSG00000186652.5254.22640505.22250-0.990809.148605.99880K562PABPC4
PRG2ENSG00000186652.5745.93410273.430601.447805.143802.33970K562PARN
PRG2ENSG00000186652.582.00080316.55780-1.9488024.6523020.97800K562PCBP1
PRG2ENSG00000186652.5147.45310288.07130-0.966206.681505.14020K562PCBP2
PRG2ENSG00000186652.5933.25760415.972501.1657013.9502012.11070K562PCBP3
PRG2ENSG00000186652.51577.46620681.462401.2108020.3903016.62630K562PES1
PRG2ENSG00000186652.5589.13740962.74320-0.708503.079401.42680K562PKM
PRG2ENSG00000186652.5715.07010319.056101.164202.120101.41940K562POLR2G
PRG2ENSG00000186652.51230.49380718.220900.776607.059305.63510K562PPIG
PRG2ENSG00000186652.5453.13250265.595100.770603.590301.44950K562PRPF6
PRG2ENSG00000186652.5259.51930699.83930-1.4312020.5688018.52090K562PRPF8
PRG2ENSG00000186652.51074.14700495.798801.115304.886703.64110K562PSIP1
PRG2ENSG00000186652.556.25740314.59030-2.4834035.4519033.18160K562PTBP1
PRG2ENSG00000186652.5769.540501557.00060-1.0167010.487208.88550K562PUF60
PRG2ENSG00000186652.56581.363901655.849901.99070122.07590117.65540K562PUM1
PRG2ENSG00000186652.52593.574001622.675100.6765016.8291014.54740K562PUM2
PRG2ENSG00000186652.5637.18510164.782901.951004.922304.22460K562PUS1
PRG2ENSG00000186652.5214.51350455.93950-1.087806.838104.51440K562RAVER1
PRG2ENSG00000186652.5343.37870160.479401.097302.826702.22800K562RBM15
PRG2ENSG00000186652.5145.69420294.04240-1.013107.443904.95180K562RBM34
PRG2ENSG00000186652.51156.79700452.280501.354709.347407.50620K562RCC2
PRG2ENSG00000186652.5209.60880317.39140-0.598603.415202.18240K562NELFE
PRG2ENSG00000186652.5255.00970712.77920-1.4829019.3428017.19720K562RPS19
PRG2ENSG00000186652.5463.919801300.85150-1.4875015.8599013.37020K562RPS3
PRG2ENSG00000186652.52200.86950410.843302.421308.305105.30970K562SAFB2
PRG2ENSG00000186652.5442.98050284.314800.639704.698003.28110K562SAFB
PRG2ENSG00000186652.51149.84840459.086101.324504.866002.73740K562SBDS
PRG2ENSG00000186652.51249.60180602.914801.051308.700307.31030K562SF3A3
PRG2ENSG00000186652.5253.46530496.98580-0.9714010.297108.59940K562SF3B4
PRG2ENSG00000186652.51183.33530270.433302.1294020.7585016.97660K562SFPQ
PRG2ENSG00000186652.51025.12990300.081801.7723013.1179010.63480K562SLBP
PRG2ENSG00000186652.5441.86670254.503300.795802.864701.60980K562SNRNP200
PRG2ENSG00000186652.5291.61750428.75730-0.556103.333102.18170K562SRFBP1
PRG2ENSG00000186652.51485.07120698.950901.0872012.546808.87420K562SRP68
PRG2ENSG00000186652.52043.334401037.145100.978204.118102.66800K562SRSF7
PRG2ENSG00000186652.5517.20220363.152500.510103.298901.63570K562SRSF9
PRG2ENSG00000186652.5749.86610330.493001.181909.133406.73180K562SSB
PRG2ENSG00000186652.52000.58320758.920401.398305.467103.62500K562STAU1
PRG2ENSG00000186652.5834.417201358.51740-0.7032010.809408.17620K562SUCLG1
PRG2ENSG00000186652.5149.11670320.03400-1.101809.973008.40690K562SYNCRIP
PRG2ENSG00000186652.51067.86910469.062301.186802.995501.45230K562TAF15
PRG2ENSG00000186652.5159.15990312.10950-0.971607.408906.18900K562TARDBP
PRG2ENSG00000186652.51030.70400498.185301.0488016.4022013.22100K562TBRG4
PRG2ENSG00000186652.51061.15820617.625200.780708.302105.54930K562TFIP11
PRG2ENSG00000186652.5119.68780301.07220-1.3308012.3170010.47710K562TIA1
PRG2ENSG00000186652.5786.92290476.884200.722504.080902.92710K562TIAL1
PRG2ENSG00000186652.5160.22880295.50770-0.883106.058904.29710K562TRA2A
PRG2ENSG00000186652.51223.85890506.547901.272602.871301.90450K562TRIM56
PRG2ENSG00000186652.5328.716101014.38030-1.6257024.4775020.98440K562TUFM
PRG2ENSG00000186652.5206.75580463.31380-1.1641010.913308.53880K562U2AF1
PRG2ENSG00000186652.55292.667501755.261501.5922014.2212011.48530K562UBE2L3
PRG2ENSG00000186652.5120.62030717.06590-2.5716054.4481050.67420K562UCHL5
PRG2ENSG00000186652.51190.45160648.035800.8773011.6001010.25570K562UPF1
PRG2ENSG00000186652.51026.76000243.446702.0763035.9228032.52440K562UTP3
PRG2ENSG00000186652.5276.72050576.53790-1.059003.770402.79280K562WDR43
PRG2ENSG00000186652.582.42920259.53350-1.654705.840503.26980K562XPO5
PRG2ENSG00000186652.576.69670250.16940-1.7057010.266806.90360K562XRCC6
PRG2ENSG00000186652.51377.24410730.294800.9151012.708409.78830K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PRG2 is not available on ENCORE database.





4 RBPs can affect the splicing of PRG2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
RIPRG2ENSG00000186652.5chr11-5715604957156790571560495715618157156482571567900.081000.000000.00031includedK562HNRNPC
RIPRG2ENSG00000186652.5chr11-5715604957156790571560495715618157156482571567900.087000.000590.01630includedK562SRSF1
RIPRG2ENSG00000186652.5chr11-5715604957156790571560495715618157156482571567900.075000.000510.05089includedK562UCHL5
RIPRG2ENSG00000186652.5chr11-5715604957156790571560495715618157156482571567900.130000.000000.00003includedK562U2AF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PRG2 is not avaliable on ENCORE database.