PRDX5

General Information

Gene Name : PRDX5
Gene ID : ENSG00000126432.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PRDX5)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PRDX5	ENSG00000126432.13	69.19	164.08	116.64	ENCSR000AEF
HepG2	PRDX5	ENSG00000126432.13	186.24	116.98	151.61	ENCSR985KAT
K562	PRDX5	ENSG00000126432.13	150.71	142.82	146.76	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PRDX5 is not avaliable on ENCORE database.

Proteins bound to RNA

PRDX5 RNA is bound by 16 proteins.

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eCLIP assay for PRDX5 is not avaliable on ENCORE database.

16 proteins are bound to PRDX5 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	64089228	64089266	+	3'-UTR	5.25601	86.53621	K562	PABPC4
chr11	64085623	64085731	+	5'-UTR,CDS	5.45663	48.49779	HepG2	DDX3X
chr11	64085619	64085730	+	5'-UTR,CDS	5.26268	35.94543	K562	DDX3X
chr11	64089152	64089237	+	3'-UTR,CDS	4.26893	34.96373	HepG2	LARP4
chr11	64085730	64085782	+	CDS	5.47576	29.50963	K562	DDX3X
chr11	64085789	64085854	+	CDS	3.59358	23.88429	K562	DDX3X
chr11	64085731	64085787	+	CDS	4.08614	18.42485	HepG2	DDX3X
chr11	64089177	64089233	+	3'-UTR	5.11640	16.67853	K562	PCBP1
chr11	64085804	64085817	+	CDS	5.34525	15.66634	K562	PABPC4
chr11	64085712	64085835	+	CDS	3.31852	15.52868	K562	DROSHA
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 34 entries

eCLIP assay for PRDX5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PRDX5 is not available on ENCORE database.
113 RBPs can affect the levels of PRDX5.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PRDX5 is not available on ENCORE database.

113 RBPs can affect the gene expression of PRDX5 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PRDX5	ENSG00000126432.9	1663.58430	3049.16000	-0.87410	32.36750	30.69050	HepG2	RECQL
PRDX5	ENSG00000126432.9	2348.37020	1280.62630	0.87470	30.29360	28.67080	HepG2	TRIM56
PRDX5	ENSG00000126432.9	1833.27690	3196.79970	-0.80220	29.84660	28.65930	HepG2	SRSF1
PRDX5	ENSG00000126432.9	1984.67160	1163.30060	0.77060	24.29890	22.65110	HepG2	SAFB2
PRDX5	ENSG00000126432.9	1460.34110	2891.45220	-0.98550	24.30020	22.41800	HepG2	RBM25
PRDX5	ENSG00000126432.9	3625.94540	1891.88040	0.93840	22.61100	21.12700	HepG2	PUF60
PRDX5	ENSG00000126432.9	2072.95150	3273.84840	-0.65930	19.20140	18.02700	HepG2	NELFE
PRDX5	ENSG00000126432.9	1675.21720	3185.93870	-0.92740	18.15440	16.74970	HepG2	QKI
PRDX5	ENSG00000126432.9	7494.71050	4075.15090	0.87890	17.09360	15.78590	K562	PUS1
PRDX5	ENSG00000126432.9	1922.08850	1170.98240	0.71490	16.10230	14.54230	HepG2	DNAJC21
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 124 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PRDX5 is not available on ENCORE database.

20 RBPs can affect the splicing of PRDX5 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PRDX5	ENSG00000126432.9	chr11	+	64088132	64088264			64087205	64087340	64088336	64088375	-0.09000	0.00000	0.00000	excluded	HepG2	U2AF1
SE	PRDX5	ENSG00000126432.9	chr11	+	64088132	64088264			64087205	64087340	64088336	64088375	-0.05200	0.00000	0.00018	excluded	K562	FXR1
MXE	PRDX5	ENSG00000126432.9	chr11	+	64087205	64087340	64088132	64088264	64085559	64085858	64088336	64088375	0.16700	0.00000	0.00000	1included	HepG2	DDX55
MXE	PRDX5	ENSG00000126432.9	chr11	+	64087205	64087340	64088132	64088264	64085559	64085858	64088336	64088375	0.14300	0.00000	0.00009	1included	HepG2	SUPV3L1
MXE	PRDX5	ENSG00000126432.9	chr11	+	64087205	64087259	64088132	64088264	64085559	64085858	64088336	64088375	0.20500	0.00000	0.00000	1included	K562	SUPV3L1
SE	PRDX5	ENSG00000126432.9	chr11	+	64087205	64087340			64085559	64085858	64088132	64088264	-0.05800	0.00001	0.00134	excluded	HepG2	PCBP1
SE	PRDX5	ENSG00000126432.9	chr11	+	64087205	64087340			64085559	64085858	64088336	64088375	-0.09000	0.00002	0.00068	excluded	K562	SRSF1
MXE	PRDX5	ENSG00000126432.9	chr11	+	64087205	64087340	64088132	64088264	64085559	64085858	64088336	64088375	0.12300	0.00002	0.00191	1included	HepG2	XRN2
SE	PRDX5	ENSG00000126432.9	chr11	+	64088132	64088264			64085559	64085858	64088336	64088375	-0.08900	0.00003	0.00237	excluded	K562	PRPF8
SE	PRDX5	ENSG00000126432.9	chr11	+	64088132	64088189			64087205	64087340	64088336	64088375	0.06300	0.00003	0.00877	included	K562	ZC3H8

Showing 1 to 10 of 26 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PRDX5

General Information

Functions

Localization

Domains (AlphaFold: PRDX5)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PRDX5 is not avaliable on ENCORE database.

16 proteins are bound to PRDX5 RNA:

eCLIP assay for PRDX5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PRDX5 is not available on ENCORE database.

113 RBPs can affect the gene expression of PRDX5 :

The Knockdown/knockout RNA-Seq assay for PRDX5 is not available on ENCORE database.

20 RBPs can affect the splicing of PRDX5 :

The Knockdown/knockout RNA-Seq assay for PRDX5 is not avaliable on ENCORE database.