PLEKHH3

General Information

Gene Name : PLEKHH3
Gene ID : ENSG00000068137.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PLEKHH3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PLEKHH3	ENSG00000068137.14	0.93	2.67	1.80	ENCSR000AEF
HepG2	PLEKHH3	ENSG00000068137.14	8.30	1.92	5.11	ENCSR985KAT
K562	PLEKHH3	ENSG00000068137.14	14.02	3.39	8.71	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PLEKHH3 is not avaliable on ENCORE database.

Proteins bound to RNA

PLEKHH3 RNA is bound by 13 proteins.

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eCLIP assay for PLEKHH3 is not avaliable on ENCORE database.

13 proteins are bound to PLEKHH3 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	40826398	40826455	-	CDS,intron-Distal,intron-Proximal	5.41733	27.17649	K562	SF3B4
chr17	40821590	40821686	-	CDS,intron-Distal,intron-Proximal	4.13916	25.92691	K562	SF3B4
chr17	40821352	40821453	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.47385	24.55500	K562	AQR
chr17	40821337	40821437	-	intron-Distal,intron-Proximal	4.57828	21.68982	K562	SF3B4
chr17	40825118	40825189	-	intron-Distal,intron-Proximal	5.61241	20.71396	K562	AQR
chr17	40821587	40821658	-	CDS,intron-Distal,intron-Proximal	3.25824	19.04937	K562	BUD13
chr17	40826455	40826483	-	intron-Distal,intron-Proximal	5.82045	18.61357	K562	SF3B4
chr17	40823545	40823606	-	CDS,intron-Distal,intron-Proximal	4.52145	16.56975	K562	BUD13
chr17	40823041	40823145	-	CDS,intron-Distal	5.10773	15.45094	K562	DDX24
chr17	40822672	40822738	-	CDS,intron-Distal,intron-Proximal	3.94004	15.21263	K562	BUD13
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 73 entries

eCLIP assay for PLEKHH3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PLEKHH3 is not available on ENCORE database.
117 RBPs can affect the levels of PLEKHH3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PLEKHH3 is not available on ENCORE database.

117 RBPs can affect the gene expression of PLEKHH3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PLEKHH3	ENSG00000068137.10	3808.24120	1563.65250	1.28410	44.24550	42.01740	K562	AGGF1
PLEKHH3	ENSG00000068137.10	3563.10120	1718.41330	1.05200	26.51790	23.19890	K562	AKAP8
PLEKHH3	ENSG00000068137.10	3279.12790	1572.19520	1.06040	24.23740	22.40590	K562	RBM15
PLEKHH3	ENSG00000068137.10	313.79590	731.88940	-1.22180	23.14550	21.51290	K562	FXR1
PLEKHH3	ENSG00000068137.10	908.80580	438.49540	1.05130	21.05160	19.65630	HepG2	ETF1
PLEKHH3	ENSG00000068137.10	779.79010	303.59990	1.36080	21.86240	18.79780	K562	TRIM56
PLEKHH3	ENSG00000068137.10	967.67530	364.33630	1.40920	17.86460	16.07620	HepG2	SF3A3
PLEKHH3	ENSG00000068137.10	768.10990	329.98880	1.21880	18.72600	15.87690	K562	SRSF5
PLEKHH3	ENSG00000068137.10	700.29480	297.01620	1.23730	18.45320	15.69470	K562	PSIP1
PLEKHH3	ENSG00000068137.10	425.47520	176.30260	1.27090	14.64540	13.42090	HepG2	PUF60
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 133 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PLEKHH3 is not available on ENCORE database.

8 RBPs can affect the splicing of PLEKHH3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PLEKHH3	ENSG00000068137.10	chr17	-	40826758	40826893	40826371	40826427	40828419	40829010	-0.67200	0.00000	0.00004	excluded	K562	SRSF1
SE	PLEKHH3	ENSG00000068137.10	chr17	-	40826758	40826893	40826371	40826427	40828419	40829010	-0.39100	0.00003	0.00639	excluded	K562	XRCC6
SE	PLEKHH3	ENSG00000068137.10	chr17	-	40826758	40826893	40826371	40826427	40828419	40829010	-0.41300	0.00006	0.01660	excluded	K562	UPF1
SE	PLEKHH3	ENSG00000068137.10	chr17	-	40826758	40826893	40826371	40826427	40828419	40829010	-0.57200	0.00012	0.00749	excluded	K562	PTBP1
SE	PLEKHH3	ENSG00000068137.10	chr17	-	40826758	40826893	40826371	40826427	40828419	40829010	-0.33000	0.00019	0.04259	excluded	K562	MTPAP
SE	PLEKHH3	ENSG00000068137.10	chr17	-	40826758	40826893	40826371	40826427	40828419	40829010	-0.31600	0.00026	0.01336	excluded	K562	FXR1
SE	PLEKHH3	ENSG00000068137.10	chr17	-	40826758	40826893	40826371	40826427	40828419	40829010	-0.50000	0.00033	0.01592	excluded	K562	TARDBP
SE	PLEKHH3	ENSG00000068137.10	chr17	-	40826758	40826893	40826371	40826427	40828419	40829010	0.45400	0.00140	0.02731	included	HepG2	U2AF1

Showing 1 to 8 of 8 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PLEKHH3

General Information

Functions

Localization

Domains (AlphaFold: PLEKHH3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PLEKHH3 is not avaliable on ENCORE database.

13 proteins are bound to PLEKHH3 RNA:

eCLIP assay for PLEKHH3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PLEKHH3 is not available on ENCORE database.

117 RBPs can affect the gene expression of PLEKHH3 :

The Knockdown/knockout RNA-Seq assay for PLEKHH3 is not available on ENCORE database.

8 RBPs can affect the splicing of PLEKHH3 :

The Knockdown/knockout RNA-Seq assay for PLEKHH3 is not avaliable on ENCORE database.