NSF

General Information

Gene Name       : NSF
Gene ID             : ENSG00000073969.18
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: NSF)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NSFENSG00000073969.1812.2711.6911.98ENCSR000AEF
HepG2NSFENSG00000073969.1826.8036.0831.44ENCSR985KAT
K562NSFENSG00000073969.1823.5024.8124.16ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NSF is not avaliable on ENCORE database.



Proteins bound to RNA
  • NSF RNA is bound by 6 proteins.  







eCLIP assay for NSF is not avaliable on ENCORE database.





6 proteins are bound to NSF RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr174483340844833524+3'-UTR3.514524.21448HepG2UPF1
chr174483399544834027+3'-UTR3.139464.44982K562UPF1
chr174483472344834782+3'-UTR5.259965.74792HepG2SUB1
chr174483349544833553+3'-UTR5.9341811.97438K562UPF1
chr174483393544833944+3'-UTR4.434184.07810K562UPF1
chr174483398144834031+3'-UTR3.349396.64080K562FAM120A
chr174483383944833906+3'-UTR4.2984610.56983K562FAM120A
chr174483458044834755+3'-UTR3.582704.36276HepG2LARP4
chr174483349144833568+3'-UTR3.341166.23843K562FAM120A
chr174483381944833908+3'-UTR4.6973716.89979K562UPF1
chr174483410844834148+3'-UTR3.919094.93550K562FAM120A
chr174483392444833977+3'-UTR4.5569112.15663K562FAM120A
chr174483393744834005+3'-UTR4.335194.29728HepG2FAM120A
chr174483374744833819+3'-UTR4.3382810.38393K562UPF1
chr174482888244828984+CDS,intron-Proximal3.031183.17744HepG2GRWD1
chr174478458544784721+intron-Distal4.051787.53395K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NSF is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NSF is not available on ENCORE database.

  • 104 RBPs can affect the levels of NSF.  








The Knockdown/knockout RNA-Seq assay for NSF is not available on ENCORE database.





104 RBPs can affect the gene expression of NSF :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NSFENSG00000073969.141810.092301196.437500.5972014.2856013.13410HepG2ACO1
NSFENSG00000073969.14776.291401259.86210-0.698608.093206.49830HepG2ADAR
NSFENSG00000073969.143035.081901521.301800.9963014.3086013.19700HepG2AKAP1
NSFENSG00000073969.141016.846101202.11800-0.241502.224101.52850HepG2AKAP8L
NSFENSG00000073969.14779.744501258.74970-0.690907.202105.96530HepG2ASCC1
NSFENSG00000073969.141110.493001430.27700-0.365102.224401.38800HepG2BCCIP
NSFENSG00000073969.142271.046401701.001200.416903.277002.63210HepG2BOP1
NSFENSG00000073969.141836.180601423.943600.366703.967503.06750HepG2CALR
NSFENSG00000073969.14810.304501195.89880-0.561605.106404.07460HepG2CIRBP
NSFENSG00000073969.141467.873501196.248900.295104.007503.23510HepG2CKAP4
NSFENSG00000073969.141527.57540775.052400.978808.457107.13960HepG2CNOT7
NSFENSG00000073969.141181.115001561.62990-0.402903.360502.61080HepG2CPSF6
NSFENSG00000073969.14770.515301211.19720-0.652508.062406.27240HepG2CPSF7
NSFENSG00000073969.141144.87940883.441500.373902.792301.71150HepG2CSTF2
NSFENSG00000073969.141359.041101792.93490-0.399707.186506.07190HepG2DAZAP1
NSFENSG00000073969.141269.518301007.348900.333602.308601.68120HepG2DDX21
NSFENSG00000073969.14801.769701065.27810-0.410002.986001.53800HepG2DDX28
NSFENSG00000073969.143041.120501457.292301.0612018.6838017.20880HepG2DDX3X
NSFENSG00000073969.14423.07140814.36420-0.9448013.5613010.99570HepG2DDX52
NSFENSG00000073969.14584.120601406.27050-1.2675019.1196017.35060HepG2DDX55
NSFENSG00000073969.141168.243601773.33950-0.602103.161602.11670HepG2DDX59
NSFENSG00000073969.141005.492301268.67970-0.335403.590802.79590HepG2DNAJC21
NSFENSG00000073969.14777.958001257.34070-0.6926015.6859014.25920HepG2DNAJC2
NSFENSG00000073969.141260.88140971.702400.375702.721401.80700HepG2EEF2
NSFENSG00000073969.14548.63560788.84350-0.523903.913302.84720HepG2EIF3D
NSFENSG00000073969.14915.640201329.93000-0.538504.264303.47470HepG2EIF4A3
NSFENSG00000073969.142296.897401769.012600.376606.575305.38510HepG2EIF4G1
NSFENSG00000073969.141331.113901694.56990-0.348302.623701.82930HepG2EIF4G2
NSFENSG00000073969.14646.877101121.86900-0.794309.094707.21770HepG2GNB2L1
NSFENSG00000073969.141310.240301770.27900-0.434103.275802.58440HepG2GPKOW
NSFENSG00000073969.14806.051201647.85500-1.0316029.6730027.27450HepG2HNRNPA2B1
NSFENSG00000073969.14380.35550639.49660-0.749604.441302.65750HepG2HNRNPAB
NSFENSG00000073969.141244.242001784.91280-0.520609.682908.44230HepG2HNRNPF
NSFENSG00000073969.141297.232101633.16590-0.332204.947104.06570HepG2HNRNPL
NSFENSG00000073969.14992.351601689.40530-0.767609.928808.82030HepG2HNRNPLL
NSFENSG00000073969.141300.770201024.642800.344103.049702.05340HepG2HNRNPM
NSFENSG00000073969.141127.115601415.22860-0.328403.762003.06590HepG2HNRNPU
NSFENSG00000073969.141291.851701757.63350-0.444205.436104.45560HepG2IGF2BP1
NSFENSG00000073969.141624.498401265.267800.360502.631401.97060HepG2IGF2BP2
NSFENSG00000073969.14578.086701445.61690-1.3223041.2949038.94770HepG2ILF2
NSFENSG00000073969.14542.641801272.64290-1.2298015.2560012.80640HepG2KHSRP
NSFENSG00000073969.142236.439801349.824100.728308.063807.03360HepG2MATR3
NSFENSG00000073969.14813.415101201.95570-0.563306.198505.03280HepG2MSI2
NSFENSG00000073969.141240.166701722.86510-0.474302.502501.58450HepG2MTPAP
NSFENSG00000073969.142226.459801381.620100.688307.856006.81400HepG2NCBP2
NSFENSG00000073969.141142.858901777.88130-0.6375010.960309.47880HepG2NOL12
NSFENSG00000073969.14983.857001497.94480-0.606506.658605.52510HepG2NSUN2
NSFENSG00000073969.14457.81880708.21870-0.629402.365901.55670HepG2PABPC1
NSFENSG00000073969.14972.364501230.42340-0.339602.119601.47970HepG2PABPC4
NSFENSG00000073969.14946.171201231.56470-0.380304.865804.09640HepG2PCBP1
NSFENSG00000073969.14913.851201262.27870-0.466006.190905.12130HepG2PPIL4
NSFENSG00000073969.141380.009801170.541500.237402.288501.57720HepG2PRPF4
NSFENSG00000073969.141774.043101252.804000.501802.918901.66910HepG2PRPF6
NSFENSG00000073969.141793.034301253.153700.516709.944509.03370HepG2PTBP1
NSFENSG00000073969.142083.609101218.659600.7737024.3081022.81710HepG2PUS1
NSFENSG00000073969.142609.535701971.206900.404606.400605.69080HepG2RBM22
NSFENSG00000073969.14666.454901076.35720-0.691607.151805.45770HepG2RCC2
NSFENSG00000073969.141418.498401922.72940-0.438804.465503.62770HepG2RPLP0
NSFENSG00000073969.14681.977301260.35030-0.8860021.4628019.91000HepG2SAFB2
NSFENSG00000073969.141152.143301672.20630-0.537405.889404.89300HepG2SF3B1
NSFENSG00000073969.14929.686901304.71180-0.488907.411006.51940HepG2SF3B4
NSFENSG00000073969.141225.006101627.48200-0.409906.894005.86760HepG2SLBP
NSFENSG00000073969.142848.599501361.829701.0646046.0878044.66740HepG2SRSF1
NSFENSG00000073969.141991.545901675.814200.248903.205202.53960HepG2SRSF5
NSFENSG00000073969.141408.529501753.60420-0.316104.021403.20700HepG2SRSF7
NSFENSG00000073969.141216.873601932.94520-0.6676017.3964016.34260HepG2SSB
NSFENSG00000073969.14945.165101399.90400-0.566704.706603.86030HepG2SUPV3L1
NSFENSG00000073969.141205.714101646.51520-0.449504.273403.39850HepG2TARDBP
NSFENSG00000073969.141023.746101375.32850-0.425904.807604.18570HepG2TIAL1
NSFENSG00000073969.14745.983101387.44100-0.8952021.2294019.85070HepG2TRIM56
NSFENSG00000073969.141024.358401270.36900-0.310502.079901.52730HepG2U2AF1
NSFENSG00000073969.141386.149001755.24510-0.340602.048701.33440HepG2UBE2L3
NSFENSG00000073969.14365.29460826.95500-1.1787016.4421014.62370HepG2UCHL5
NSFENSG00000073969.141565.305101255.612900.318004.271403.43400HepG2UPF1
NSFENSG00000073969.141487.552601212.244500.295203.676803.00270HepG2UTP3
NSFENSG00000073969.141798.189801264.752500.507603.228302.08000HepG2XRCC6
NSFENSG00000073969.14720.788901378.05240-0.9350012.7383011.20260HepG2XRN2
NSFENSG00000073969.141757.077901380.933500.347406.076305.34820HepG2ZNF622
NSFENSG00000073969.14875.693601258.16460-0.522805.496403.76540K562AARS
NSFENSG00000073969.142298.633801973.317300.220102.446601.90760K562AGGF1
NSFENSG00000073969.141550.056702053.30580-0.405604.124003.32390K562AKAP8L
NSFENSG00000073969.141229.067501478.11560-0.266202.588901.33090K562BCCIP
NSFENSG00000073969.142168.650701388.567900.643107.958006.44580K562BOP1
NSFENSG00000073969.141194.961801852.87080-0.632808.333406.23670K562CIRBP
NSFENSG00000073969.141441.431202238.65100-0.6351014.0297011.61180K562CPEB4
NSFENSG00000073969.14800.259501280.22360-0.677905.005401.95520K562DDX52
NSFENSG00000073969.14957.356101343.66250-0.489003.442502.27850K562EIF3D
NSFENSG00000073969.14888.742201358.03290-0.611707.441506.10070K562EIF4A3
NSFENSG00000073969.141432.669402017.92580-0.494205.521604.29970K562FIP1L1
NSFENSG00000073969.141960.804201502.359900.384103.398602.44740K562FMR1
NSFENSG00000073969.141706.890501409.430400.276202.067001.37670K562GPKOW
NSFENSG00000073969.141967.935302463.80310-0.324203.118402.31810K562GRSF1
NSFENSG00000073969.14957.161801229.44680-0.361202.900101.73050K562HNRNPF
NSFENSG00000073969.141342.529301726.75990-0.363102.747201.51770K562HNRNPK
NSFENSG00000073969.141428.098001847.91460-0.371804.611703.45320K562HNRNPU
NSFENSG00000073969.142270.312702735.92440-0.269102.079601.38660K562HSPD1
NSFENSG00000073969.141051.338501748.25300-0.733708.161805.16940K562KHSRP
NSFENSG00000073969.141749.264601203.731400.539103.944802.81430K562KRR1
NSFENSG00000073969.141040.932001396.28300-0.423703.351401.70250K562LIN28B
NSFENSG00000073969.141334.527201816.89510-0.445104.964803.83080K562MAGOH
NSFENSG00000073969.141116.409601375.80220-0.301402.161701.38730K562METAP2
NSFENSG00000073969.142014.365201778.169100.179802.349201.65710K562NSUN2
NSFENSG00000073969.14952.619601355.52230-0.508904.502502.48780K562NUSAP1
NSFENSG00000073969.142875.224602127.838000.434202.442001.30110K562PABPC1
NSFENSG00000073969.141349.914401775.81730-0.395604.395902.65770K562PCBP1
NSFENSG00000073969.142253.463401487.020900.599606.276605.01990K562PCBP3
NSFENSG00000073969.141024.023401344.16410-0.392503.155701.61570K562PHF6
NSFENSG00000073969.141699.439401140.614700.575108.491307.11590K562POLR2G
NSFENSG00000073969.141774.014602290.69830-0.368803.352102.43400K562PPIG
NSFENSG00000073969.14853.915801234.45420-0.531704.931303.67790K562PSIP1
NSFENSG00000073969.142177.250901765.196900.302602.941002.25910K562PTBP1
NSFENSG00000073969.143477.059702036.461000.7717012.7391011.62090K562PUS1
NSFENSG00000073969.141361.175801692.83580-0.314602.470901.67970K562RBM22
NSFENSG00000073969.14534.800801126.19400-1.0744019.7706017.15660K562RCC2
NSFENSG00000073969.141464.541501754.59400-0.260702.608401.81630K562SF3A3
NSFENSG00000073969.141066.613501531.00040-0.521407.152905.73640K562SF3B4
NSFENSG00000073969.141044.736501797.61900-0.7829023.5078021.22350K562SRPK2
NSFENSG00000073969.142754.039201730.435700.6703012.3880010.88980K562SRSF1
NSFENSG00000073969.141004.455701238.76530-0.302502.269101.33350K562SRSF4
NSFENSG00000073969.141394.119701144.040100.285102.423701.65550K562SYNCRIP
NSFENSG00000073969.141408.617701751.41240-0.314202.284401.63800K562TARDBP
NSFENSG00000073969.141376.217401689.40920-0.295802.618301.82370K562TIA1
NSFENSG00000073969.141308.546201657.57940-0.341102.786401.69020K562TRA2A
NSFENSG00000073969.141770.532201473.901200.264402.369301.62580K562U2AF2
NSFENSG00000073969.14864.933501251.40460-0.532904.817403.43440K562UCHL5
NSFENSG00000073969.141306.850201613.30340-0.303902.646601.78780K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NSF is not available on ENCORE database.





5 RBPs can affect the splicing of NSF :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENSFENSG00000073969.14chr17+4483286444832963448326794483273544833167448332030.146000.000000.00008includedHepG2U2AF2
SENSFENSG00000073969.14chr17+4483286444832963448326794483273544833167448332030.066000.000570.04284includedK562HNRNPL
SENSFENSG00000073969.14chr17+448328644483296344832679448327354483316744833203-0.056000.005270.09165excludedHepG2SRSF1
SENSFENSG00000073969.14chr17+447077764470781644703978447040784471474144714908-0.533000.001420.03649excludedK562AGGF1
A3SSNSFENSG00000073969.14chr17+4478831044788485447883284478848544782124447822200.058000.000030.00032longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NSF is not avaliable on ENCORE database.