NECAB3

General Information

Gene Name       : NECAB3
Gene ID             : ENSG00000125967.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NECAB3)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NECAB3ENSG00000125967.162.163.122.64ENCSR000AEF
HepG2NECAB3ENSG00000125967.1666.6325.9746.30ENCSR985KAT
K562NECAB3ENSG00000125967.1625.8825.3125.59ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NECAB3 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NECAB3 RNA is bound by 52 proteins.  







eCLIP assay for NECAB3 is not avaliable on ENCORE database.





52 proteins are bound to NECAB3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr203224804732248162-3'-UTR,CDS,intron-Distal,intron-Proximal3.4413614.37008HepG2GRWD1
chr203224807332248113-3'-UTR,CDS,intron-Distal5.6027239.61928HepG2PPIG
chr203224749132247532-3'-UTR,CDS,intron-Distal3.225963.65697HepG2PABPN1
chr203224800232248047-3'-UTR,intron-Distal,intron-Proximal3.483997.52043HepG2GRWD1
chr203224773032247817-3'-UTR,CDS,intron-Distal,intron-Proximal4.4578545.56330HepG2PPIG
chr203224581032245854-3'-UTR,CDS,intron-Distal,intron-Proximal3.040406.51098HepG2PRPF8
chr203224630532246401-3'-UTR,CDS,intron-Distal,intron-Proximal6.3140415.35700K562AQR
chr203224582132245839-3'-UTR,CDS,intron-Distal4.1370714.42334HepG2PPIG
chr203224533232245433-3'-UTR,intron-Distal,intron-Proximal4.3935925.19175HepG2DDX55
chr203224652732246533-3'-UTR,CDS,intron-Distal,intron-Proximal4.5818412.47570HepG2PPIG
chr203224818432248197-3'-UTR,CDS,intron-Distal3.622163.01533HepG2SRSF1
chr203224499932245060-3'-UTR,intron-Distal3.636256.55355HepG2RBFOX2
chr203224764732247698-3'-UTR,CDS,intron-Distal,intron-Proximal4.885414.13847K562AQR
chr203224805232248073-3'-UTR,CDS,intron-Distal,intron-Proximal5.2638134.05852HepG2PPIG
chr203224787832247908-3'-UTR,intron-Distal,intron-Proximal3.371718.18953HepG2RBFOX2
chr203224730132247315-3'-UTR,CDS,intron-Distal,intron-Proximal3.185873.65697HepG2PABPN1
chr203224583532245932-3'-UTR,CDS,intron-Distal,intron-Proximal4.1055822.87710HepG2SF3B4
chr203224662632246688-3'-UTR,CDS,intron-Distal,intron-Proximal5.6548319.41221K562SF3B4
chr203224774532247865-3'-UTR,CDS,intron-Distal,intron-Proximal3.9722317.06478K562DDX24
chr203224776932247851-3'-UTR,CDS,intron-Distal,intron-Proximal3.8179721.94451HepG2PRPF8
chr203224730532247351-3'-UTR,CDS,intron-Distal4.325903.48722HepG2PRPF4
chr203224648132246536-3'-UTR,CDS,intron-Distal,intron-Proximal3.041296.93022HepG2AQR
chr203224818532248200-3'-UTR,CDS,intron-Distal3.549009.71090HepG2PPIG
chr203224512932245192-3'-UTR,intron-Distal3.336283.72765HepG2UPF1
chr203224647632246540-3'-UTR,CDS,intron-Distal,intron-Proximal4.0441617.05532HepG2PRPF8
chr203224774832247820-3'-UTR,CDS,intron-Distal,intron-Proximal3.3996912.42123HepG2U2AF2
chr203224558432245620-3'-UTR,intron-Distal,intron-Proximal5.963536.59792K562PABPC4
chr203224782832247921-3'-UTR,CDS,intron-Distal,intron-Proximal4.431784.53890K562PCBP1
chr203224795732248031-3'-UTR,intron-Distal,intron-Proximal3.428865.60152HepG2HNRNPK
chr203224768932247720-3'-UTR,CDS,intron-Distal,intron-Proximal4.6240317.84022HepG2PPIG
chr203224561532245647-3'-UTR,CDS,intron-Distal3.276476.45347HepG2GRWD1
chr203224765132247692-3'-UTR,CDS,intron-Distal,intron-Proximal3.2310710.11149HepG2PRPF8
chr203224774532247821-3'-UTR,CDS,intron-Distal,intron-Proximal3.136929.97208HepG2GRWD1
chr203224791132247969-3'-UTR,intron-Distal,intron-Proximal3.851519.05128HepG2PRPF8
chr203224806032248194-3'-UTR,CDS,intron-Distal,intron-Proximal3.237083.52873K562SRSF1
chr203224500332245060-3'-UTR,intron-Distal4.147917.11331HepG2LSM11
chr203224624432246295-3'-UTR,CDS,intron-Distal,intron-Proximal4.3487817.81618HepG2PRPF8
chr203224534432245437-3'-UTR,intron-Distal,intron-Proximal3.513985.80574K562DDX6
chr203224532832245433-3'-UTR,intron-Distal,intron-Proximal4.325939.48994HepG2PABPN1
chr203224811332248157-3'-UTR,CDS,intron-Distal3.3255613.97363HepG2PPIG
chr203224628632246331-3'-UTR,CDS,intron-Distal,intron-Proximal4.246739.37945HepG2GRWD1
chr203224787732248025-3'-UTR,intron-Distal,intron-Proximal3.710685.95375K562ZNF622
chr203224801232248064-3'-UTR,intron-Distal,intron-Proximal4.162636.01372K562AQR
chr203224742832247480-3'-UTR,CDS,intron-Distal,intron-Proximal4.817925.90542HepG2PRPF4
chr203224653332246614-3'-UTR,CDS,intron-Distal3.4881210.01784HepG2GRWD1
chr203224535432245436-3'-UTR,intron-Distal,intron-Proximal4.093419.03320K562DDX55
chr203224575732245800-3'-UTR,CDS,intron-Distal,intron-Proximal3.077979.90375HepG2PPIG
chr203224786832247906-3'-UTR,intron-Distal,intron-Proximal3.948906.85708HepG2SF3A3
chr203224509532245276-3'-UTR,intron-Distal,intron-Proximal3.460415.99038K562UPF1
chr203224532032245437-3'-UTR,intron-Distal,intron-Proximal3.612117.93263HepG2AKAP1
chr203224634532246359-3'-UTR,CDS,intron-Distal4.7310915.11472HepG2PPIG
chr203224554732245627-3'-UTR,intron-Distal,intron-Proximal3.1811317.99123HepG2PPIG
chr203224530332245371-3'-UTR,intron-Distal,intron-Proximal4.428499.06961HepG2UPF1
chr203224810732248158-3'-UTR,CDS,intron-Distal3.350384.74829HepG2UCHL5
chr203224803432248093-3'-UTR,CDS,intron-Distal,intron-Proximal3.6333016.24470HepG2PRPF8
chr203224653332246577-3'-UTR,CDS,intron-Distal3.7762415.19416HepG2PPIG
chr203224535132245439-3'-UTR,intron-Distal,intron-Proximal3.128139.97931HepG2LARP4
chr203224536532245440-3'-UTR,intron-Distal,intron-Proximal3.428299.70637HepG2ZC3H11A
chr203224632632246376-3'-UTR,CDS,intron-Distal,intron-Proximal3.024163.31614HepG2U2AF2
chr203224658232246629-3'-UTR,CDS,intron-Distal,intron-Proximal3.4229015.09999HepG2PPIG
chr203224536132245441-3'-UTR,intron-Distal,intron-Proximal3.7792410.11337K562UPF1
chr203224733732247356-3'-UTR,CDS,intron-Distal,intron-Proximal4.1229911.41042HepG2PPIG
chr203224777732247865-3'-UTR,CDS,intron-Distal,intron-Proximal3.3859816.98468HepG2EFTUD2
chr203224790832247977-3'-UTR,intron-Distal,intron-Proximal4.305124.80493K562RBFOX2
chr203224628132246345-3'-UTR,CDS,intron-Distal,intron-Proximal5.2811834.22145HepG2PPIG
chr203224630832246422-3'-UTR,CDS,intron-Distal,intron-Proximal3.373483.99122K562SMNDC1
chr203224657632246640-3'-UTR,CDS,intron-Distal,intron-Proximal3.634647.96522HepG2PABPN1
chr203224552232245591-3'-UTR,intron-Distal,intron-Proximal4.022013.85450K562SRSF1
chr203224728332247362-3'-UTR,CDS,intron-Distal,intron-Proximal4.614945.13052HepG2SRSF9
chr203224513732245193-3'-UTR,intron-Distal4.259096.89004HepG2PABPN1
chr203224535632245446-3'-UTR,intron-Distal,intron-Proximal4.6714612.87873K562PABPC4
chr203224559532245645-3'-UTR,CDS,intron-Distal,intron-Proximal4.082704.92682K562DDX55
chr203224751832247538-3'-UTR,CDS,intron-Distal4.6027818.48398HepG2PPIG
chr203224522332245270-3'-UTR,intron-Distal4.251776.62324HepG2PABPN1
chr203224634732246407-3'-UTR,CDS,intron-Distal,intron-Proximal3.1168913.99294HepG2EFTUD2
chr203224635632246465-3'-UTR,CDS,intron-Distal,intron-Proximal4.7955915.87685K562EFTUD2
chr203224801232248079-3'-UTR,CDS,intron-Distal,intron-Proximal4.990508.66757K562DDX24
chr203224819532248256-3'-UTR,CDS,intron-Distal,intron-Proximal4.345475.68247K562SF3B4
chr203224769232247745-3'-UTR,CDS,intron-Distal,intron-Proximal4.1764012.39122HepG2GRWD1
chr203224538432245419-3'-UTR,intron-Distal,intron-Proximal3.405173.54718K562PRPF8
chr203224790832247991-3'-UTR,intron-Distal,intron-Proximal3.9414920.60119HepG2RBFOX2
chr203224781532247875-3'-UTR,CDS,intron-Distal,intron-Proximal3.667957.05055K562PRPF8
chr203224745432247518-3'-UTR,CDS,intron-Distal,intron-Proximal3.4670224.07648HepG2PPIG
chr203224654632246631-3'-UTR,CDS,intron-Distal,intron-Proximal3.3846410.11887HepG2SRSF1
chr203224537132245436-3'-UTR,intron-Distal,intron-Proximal5.6056212.83360HepG2UPF1
chr203224555432245592-3'-UTR,intron-Distal,intron-Proximal3.116823.71578HepG2LSM11
chr203225436632254418-5'-UTR,intron-Distal5.4131310.76572K562NONO
chr203226213932262227-5'-UTR,CDS,intron-Distal,intron-Proximal4.1158312.85698HepG2NCBP2
chr203225849432258557-5'-UTR,CDS,intron-Distal3.2906120.25988HepG2PPIG
chr203225850032258541-5'-UTR,CDS,intron-Distal3.682974.17442HepG2SRSF1
chr203225446332254499-5'-UTR,intron-Distal,intron-Proximal3.652155.60091K562NONO
chr203225722632257278-5'-UTR,CDS,intron-Distal,intron-Proximal5.1523028.84622HepG2PPIG
chr203225718032257225-5'-UTR,CDS,intron-Distal,intron-Proximal3.4758722.77526HepG2PPIG
chr203225857632258665-5'-UTR,CDS,intron-Distal,intron-Proximal3.506406.13643K562AQR
chr203225724232257325-5'-UTR,CDS,intron-Distal,intron-Proximal3.182496.72905K562BUD13
chr203225726232257357-5'-UTR,CDS,intron-Distal,intron-Proximal3.088679.88041HepG2PRPF4
chr203225436532254425-5'-UTR,intron-Distal3.388063.99385K562CSTF2T
chr203225717832257202-5'-UTR,CDS,intron-Distal,intron-Proximal4.266919.72320HepG2SRSF1
chr203226015832260247-CDS,intron-Distal,intron-Proximal3.300688.75034HepG2AQR
chr203224743432247454-CDS,intron-Distal,intron-Proximal3.041017.85100HepG2PPIG
chr203225859432258631-CDS,intron-Distal,intron-Proximal3.053929.61032HepG2BUD13
chr203225859432258690-CDS,intron-Distal,intron-Proximal4.4437915.51518HepG2AQR
chr203226205432262139-CDS,intron-Distal3.409885.99258HepG2NCBP2
chr203225570032255749-intron-Distal3.297605.36249HepG2CSTF2T
chr203225135132251386-intron-Distal4.755294.94096HepG2SFPQ
chr203225789032257972-intron-Distal,intron-Proximal3.105008.15455HepG2HNRNPK
chr203225461332254661-intron-Distal4.949127.17589HepG2SFPQ
chr203224664332246692-intron-Distal,intron-Proximal3.5641312.31819HepG2SF3B4
chr203224568732245713-intron-Distal,intron-Proximal3.163463.60305HepG2SF3B4
chr203225740032257462-intron-Distal,intron-Proximal3.332218.40081HepG2EFTUD2
chr203225636732256416-intron-Distal3.261573.74491K562CSTF2T
chr203224905832249114-intron-Distal5.021138.63014K562TARDBP
chr203225011032250158-intron-Distal,intron-Proximal4.339983.99137K562NONO
chr203224865132248718-intron-Distal3.467674.41411K562TARDBP
chr203224585032245882-intron-Distal,intron-Proximal4.090386.87873HepG2EFTUD2
chr203225460432254662-intron-Distal,intron-Proximal4.3624410.06641K562NONO
chr203225555332255600-intron-Distal3.632177.80345HepG2CSTF2T
chr203225148932251531-intron-Distal,intron-Proximal4.201303.45860K562TIA1
chr203225675232256839-intron-Distal3.334014.12745K562EWSR1
chr203225069432250745-intron-Distal3.598556.99195K562NONO
chr203225284432252940-intron-Distal3.666743.19850K562FUS
chr203225860632258664-intron-Distal,intron-Proximal3.0265510.93821HepG2PRPF8
chr203226007632260157-intron-Distal,intron-Proximal4.6146713.24177K562AQR
chr203224637432246467-intron-Distal,intron-Proximal4.375144.14518HepG2GTF2F1
chr203225224132252306-intron-Distal5.1680010.03902K562NONO
chr203224923332249302-intron-Distal3.031763.85467K562EWSR1
chr203225675832256825-intron-Distal3.940735.23268K562EIF4G2
chr203225825632258338-intron-Distal,intron-Proximal3.8737311.34101HepG2DDX59
chr203224926932249315-intron-Distal4.377935.34533K562NONO
chr203224905332249111-intron-Distal3.668264.51839K562EWSR1
chr203224584132245910-intron-Distal,intron-Proximal5.200716.47067K562SF3B4
chr203225745032257491-intron-Distal,intron-Proximal3.3851910.10185HepG2PRPF8
chr203225283432252895-intron-Distal4.606815.84224K562EWSR1
chr203225127532251330-intron-Distal4.116126.75450K562NONO
chr203224636832246483-intron-Distal,intron-Proximal4.0074312.98376HepG2PRPF4
chr203224854932248619-intron-Distal3.507634.47051K562EWSR1
chr203225549532255538-intron-Distal3.908638.40145HepG2HNRNPM
chr203225116732251209-intron-Distal3.799426.77154K562NONO
chr203225555932255606-intron-Distal4.226945.20772HepG2FKBP4
chr203224640132246456-intron-Distal,intron-Proximal3.475904.41130K562AQR
chr203224641932246490-intron-Distal,intron-Proximal3.8977015.61804HepG2RBFOX2
chr203225535232255400-intron-Distal3.947916.77154K562NONO
chr203224717032247257-intron-Distal,intron-Proximal4.2568019.91098HepG2EFTUD2
chr203225547032255536-intron-Distal3.138874.31709K562EWSR1
chr203224857832248626-intron-Distal3.801963.12825K562EIF4G2
chr203225228932252324-intron-Distal4.922713.11886K562DROSHA
chr203225452932254566-intron-Distal,intron-Proximal4.481885.86222K562NONO
chr203225774332257797-intron-Distal3.535616.54075HepG2HNRNPK
chr203225549232255547-intron-Distal4.088908.11002K562NONO
chr203224637832246459-intron-Distal,intron-Proximal4.311768.23899K562PRPF8
chr203225247732252533-intron-Distal4.812615.78468HepG2SFPQ
chr203225688232256919-intron-Distal,intron-Proximal4.317784.84226K562NONO
chr203225220432252238-intron-Distal4.320014.46290K562EWSR1
chr203225496632254996-intron-Distal4.026653.19904K562TIA1
chr203225222032252298-intron-Distal3.828264.46248HepG2FAM120A
chr203225164732251722-intron-Distal4.4010010.31744K562NONO
chr203225182732251866-intron-Distal4.652155.42636K562NONO
chr203225225032252315-intron-Distal3.731918.97207HepG2CSTF2T
chr203225109032251115-intron-Distal4.264913.87357K562EWSR1
chr203224638932246435-intron-Distal,intron-Proximal3.946775.20093K562DDX24
chr203225197132252052-intron-Distal4.475824.22598K562CSTF2T
chr203225164932251699-intron-Distal5.008776.63341HepG2SFPQ
chr203225571132255774-intron-Distal3.326864.04785HepG2XPO5
chr203226015732260204-intron-Distal,intron-Proximal6.3888916.44435K562AQR
chr203224684532246945-intron-Distal4.469038.23679HepG2CDC40
chr203224904732249107-intron-Distal3.981887.24988K562NONO
chr203225774332257804-intron-Distal3.063453.41981K562HNRNPK
chr203225651432256564-intron-Distal3.291023.84340K562CSTF2T
chr203225548532255555-intron-Distal3.303826.99328HepG2NKRF
chr203225745532257477-intron-Distal,intron-Proximal3.539793.96535HepG2AQR
chr203225667632256729-intron-Distal4.928007.73240K562NONO
chr203225146432251521-intron-Distal5.6238611.74831K562NONO
chr203225817132258256-intron-Distal,intron-Proximal4.7330615.52364HepG2DDX59
chr203224692032246966-intron-Distal3.1070211.75714HepG2EFTUD2
chr203225505432255130-intron-Distal3.483399.41394HepG2CSTF2T
chr203225479332254864-intron-Distal3.208864.11926K562TIA1
chr203224857932248622-intron-Distal4.538895.34533K562NONO
chr203225590332255990-intron-Distal3.648903.15856K562FUS
chr203224701432247069-intron-Distal3.203144.48980K562PRPF8
chr203225521132255261-intron-Distal3.702935.45902K562TIA1
chr203225625232256279-intron-Distal4.388674.96496K562NONO
chr203224702732247057-intron-Distal4.221603.70701HepG2PRPF4
chr203225026832250368-intron-Distal,intron-Proximal4.340393.34601K562HNRNPK
chr203224716432247208-intron-Distal,intron-Proximal3.683193.72699HepG2PRPF4
chr203225521832255268-intron-Distal4.133416.54942K562NONO
chr203224720832247257-intron-Distal,intron-Proximal3.714704.35063HepG2PRPF4
chr203225554732255604-intron-Distal4.345668.65415K562NONO
chr203225503432255101-intron-Distal3.980744.66021K562GEMIN5
chr203225541832255515-intron-Distal3.390726.25829K562SLTM
chr203225223832252310-intron-Distal5.073256.58779K562EWSR1
chr203225782432257953-intron-Distal,intron-Proximal3.785586.44564K562HNRNPK
chr203225272832252796-intron-Distal3.311474.40213K562EWSR1
chr203225752232257561-intron-Distal,intron-Proximal4.778979.22974HepG2SF3A3
chr203225218732252241-intron-Distal3.902476.56195HepG2NKRF
chr203225744032257488-intron-Distal,intron-Proximal4.739114.48002K562AQR
chr203225198732252065-intron-Distal4.419969.13964K562NONO
chr203224689832246961-intron-Distal4.315257.40437K562DDX24
chr203225843332258489-intron-Distal,intron-Proximal3.623633.52230K562AQR
chr203225107932251113-intron-Distal4.723706.16396K562NONO
chr203224726132247297-intron-Distal,intron-Proximal3.290067.98498HepG2PRPF8
chr203225225332252305-intron-Distal4.958645.49507HepG2FKBP4
chr203225135432251396-intron-Distal5.031658.33684K562NONO
chr203225505332255114-intron-Distal5.5301910.03902K562NONO
chr203225026332250375-intron-Distal,intron-Proximal3.536328.45186HepG2HNRNPK
chr203225188732251945-intron-Distal3.584556.99195K562NONO
chr203225224732252329-intron-Distal4.799156.51015K562CSTF2T
chr203225466232254699-intron-Distal3.913136.54942K562NONO
chr203226198132262029-intron-Distal5.243367.23718K562AQR
chr203225844632258490-intron-Distal,intron-Proximal3.6894510.63457HepG2PRPF8
chr203224640332246444-intron-Distal,intron-Proximal3.9490010.48915HepG2BUD13
chr203224637832246432-intron-Distal,intron-Proximal3.569205.47851K562SF3B4
chr203225677932256819-intron-Distal3.085453.89711K562NONO
chr203225682432256871-intron-Distal,intron-Proximal5.139719.55926K562NONO
chr203224571232245745-intron-Distal,intron-Proximal3.373848.18981HepG2PRPF8
chr203224640332246481-intron-Distal,intron-Proximal4.4623818.63046HepG2AQR
chr203226008932260172-intron-Distal,intron-Proximal3.131685.50952HepG2PRPF4
chr203225566832255744-intron-Distal5.188227.60866K562NONO
chr203225210532252130-intron-Distal4.547175.00384HepG2SFPQ
chr203224859132248645-intron-Distal4.429695.18738K562TARDBP
chr203225250532252579-intron-Distal3.503076.64311K562EWSR1
chr203225737932257450-intron-Distal,intron-Proximal3.136603.61689K562RBFOX2
chr203225497832255009-intron-Distal4.685296.40665K562NONO
chr203225463432254710-intron-Distal3.823264.23616K562TIA1
chr203225249332252552-intron-Distal4.296907.24988K562NONO
chr203225467632254703-intron-Distal3.202773.41462K562EWSR1
chr203224691532246979-intron-Distal3.793327.48417HepG2PRPF4
chr203225129932251347-intron-Distal3.824463.77743K562DDX52
chr203224688132246920-intron-Distal3.0419512.22282HepG2EFTUD2
chr203226183332261924-intron-Distal4.515844.40847HepG2PTBP1
chr203226122532261295-intron-Distal3.259093.47356HepG2HNRNPK
chr203225094232250981-intron-Distal3.675805.85006K562NONO
chr203225141432251472-intron-Distal3.882596.10049K562TIA1
chr203225146332251535-intron-Distal,intron-Proximal3.065625.07619HepG2CSTF2T
chr203225594132255967-intron-Distal3.872773.17740K562CSTF2T
chr203225592132255989-intron-Distal3.697937.90586K562NONO
chr203225141632251496-intron-Distal3.499815.67455HepG2SFPQ
chr203224690532246958-intron-Distal3.635775.32227K562EFTUD2
chr203224820132248254-intron-Distal,intron-Proximal4.349749.12858HepG2SF3B4
chr203225127932251358-intron-Distal5.405186.47693HepG2FKBP4
chr203225739432257444-intron-Distal,intron-Proximal3.688775.34167HepG2SF3B4
chr203225433132254357-intron-Distal3.762203.06140HepG2NKRF
chr203224640732246470-intron-Distal,intron-Proximal3.7423416.83860HepG2EFTUD2
chr203225636032256424-intron-Distal3.561203.93915K562EWSR1
chr203224715332247213-intron-Distal,intron-Proximal4.2904814.58642HepG2RBFOX2
chr203226007532260165-intron-Distal,intron-Proximal3.6216011.44093HepG2EFTUD2
chr203225224632252328-intron-Distal4.727615.22198HepG2RBM5
chr203224754432247593-intron-Distal,intron-Proximal3.232563.66703HepG2SF3B4
chr203225140732251450-intron-Distal4.785725.66217K562NONO
chr203225295232252971-intron-Distal3.876133.53896K562NONO
chr203225199332252045-intron-Distal3.163744.67846K562EWSR1
chr203225224532252318-intron-Distal3.210013.59114K562DHX30
chr203225589832255964-intron-Distal3.010947.92790HepG2CSTF2T
chr203226008432260158-intron-Distal,intron-Proximal4.021537.17852HepG2AQR
chr203225130132251346-intron-Distal3.700275.27813K562EWSR1
chr203225090332250948-intron-Distal3.043293.40404K562CSTF2T
chr203224640432246475-intron-Distal,intron-Proximal3.743088.66868K562BUD13
chr203225225832252309-intron-Distal3.940653.64994HepG2FUS
chr203225505432255131-intron-Distal3.069515.74509K562EWSR1
chr203225026932250321-intron-Distal,intron-Proximal3.163294.14131HepG2DDX59
chr203224688232247001-intron-Distal3.144586.65384K562UCHL5
chr203225225332252412-intron-Distal3.835327.46643K562FUS
chr203226139432261498-intron-Distal3.374764.39383HepG2HNRNPK
chr203225676132256820-intron-Distal4.566174.14527K562SLTM
chr203224755232247597-intron-Distal,intron-Proximal3.023583.60559HepG2AQR
chr203224640632246476-intron-Distal,intron-Proximal3.6325627.47667HepG2PRPF8
chr203225637632256411-intron-Distal4.704466.16396K562NONO
chr203225586332255894-intron-Distal4.801935.66217K562NONO
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NECAB3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NECAB3 is not available on ENCORE database.

  • 100 RBPs can affect the levels of NECAB3.  








The Knockdown/knockout RNA-Seq assay for NECAB3 is not available on ENCORE database.





100 RBPs can affect the gene expression of NECAB3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NECAB3ENSG00000125967.12665.92040974.56090-0.549406.500205.64860HepG2ACO1
NECAB3ENSG00000125967.12813.46740425.031400.9364011.8000010.67890HepG2BOP1
NECAB3ENSG00000125967.12279.05610542.10650-0.958007.727806.53000HepG2CALR
NECAB3ENSG00000125967.12748.68480974.17110-0.379803.582302.84210HepG2CKAP4
NECAB3ENSG00000125967.12527.17470297.380000.825904.768903.75850HepG2CNOT7
NECAB3ENSG00000125967.12588.17060387.912700.600406.000904.50180HepG2YBX3
NECAB3ENSG00000125967.12878.11450665.483700.399905.206204.23570HepG2DAZAP1
NECAB3ENSG00000125967.121097.58160932.344700.235301.996501.40680HepG2DKC1
NECAB3ENSG00000125967.12693.16570380.917800.8636012.7655011.34470HepG2DNAJC21
NECAB3ENSG00000125967.12625.80530377.530100.7290010.836909.64280HepG2DNAJC2
NECAB3ENSG00000125967.121127.860301318.66660-0.225502.300101.74310HepG2ETF1
NECAB3ENSG00000125967.12685.96660952.16210-0.473102.405301.62800HepG2EWSR1
NECAB3ENSG00000125967.12720.696001015.76360-0.495102.399001.67740HepG2FIP1L1
NECAB3ENSG00000125967.12713.30500904.70670-0.342902.425701.68850HepG2FUBP3
NECAB3ENSG00000125967.12777.65480442.278500.814106.064705.14350HepG2GPKOW
NECAB3ENSG00000125967.12453.70310251.856100.849003.118901.66770HepG2HNRNPA0
NECAB3ENSG00000125967.12600.87900384.566900.643702.300401.70660HepG2HNRNPA1
NECAB3ENSG00000125967.12885.07010550.755100.684308.268207.11340HepG2HNRNPF
NECAB3ENSG00000125967.12895.98450606.172300.563609.340608.17250HepG2HNRNPL
NECAB3ENSG00000125967.12916.58260424.924101.1090025.9160024.21830HepG2HNRNPU
NECAB3ENSG00000125967.12898.07680542.338400.727509.979308.68660HepG2IGF2BP1
NECAB3ENSG00000125967.12626.09280434.047300.528406.491705.41550HepG2ILF2
NECAB3ENSG00000125967.12539.77730283.754500.927606.233104.35190HepG2KHDRBS1
NECAB3ENSG00000125967.121317.94760917.983900.521703.307802.39780HepG2LARP4
NECAB3ENSG00000125967.12842.10810659.897900.351702.623601.88090HepG2NOL12
NECAB3ENSG00000125967.12462.52190276.898700.740104.049902.31340HepG2NOLC1
NECAB3ENSG00000125967.12548.79160420.612100.383702.942202.07180HepG2PARN
NECAB3ENSG00000125967.12789.15200974.10110-0.303802.899502.28200HepG2PCBP1
NECAB3ENSG00000125967.12632.35240378.999700.738409.283207.97520HepG2PPIL4
NECAB3ENSG00000125967.12428.02960649.16510-0.600906.946005.78410HepG2PRPF4
NECAB3ENSG00000125967.12224.69810406.13480-0.854002.478001.71170HepG2PRPF8
NECAB3ENSG00000125967.12792.52770629.959900.331102.391501.83130HepG2PUF60
NECAB3ENSG00000125967.12829.62320668.764900.310903.564602.90870HepG2PUM1
NECAB3ENSG00000125967.121024.85000668.254900.616804.278003.45530HepG2PUM2
NECAB3ENSG00000125967.121326.48590992.627400.418206.420005.55090HepG2PUS1
NECAB3ENSG00000125967.12215.53320513.03100-1.251102.219701.58300HepG2RAVER1
NECAB3ENSG00000125967.12808.046401021.29390-0.337902.634501.79570HepG2RBM15
NECAB3ENSG00000125967.12612.927401102.14950-0.8465015.6669014.63950HepG2RBM22
NECAB3ENSG00000125967.12448.28890287.345900.641502.944701.35060HepG2RBM47
NECAB3ENSG00000125967.12649.96410298.992201.1202010.315108.80920HepG2RPS3A
NECAB3ENSG00000125967.12721.71480378.418400.9313012.5912011.36660HepG2SAFB2
NECAB3ENSG00000125967.12567.098701071.26930-0.917608.419807.19170HepG2SF3A3
NECAB3ENSG00000125967.121216.141101031.949100.236802.063801.54180HepG2SF3B4
NECAB3ENSG00000125967.121122.92320604.104400.8943023.4576021.81560HepG2SLBP
NECAB3ENSG00000125967.12578.23140441.307800.389803.431802.72810HepG2SMN1
NECAB3ENSG00000125967.12298.46430464.83200-0.639203.027402.20940HepG2SNRNP70
NECAB3ENSG00000125967.12629.908901244.81650-0.9827026.1830025.05050HepG2SRFBP1
NECAB3ENSG00000125967.12637.523601077.13310-0.7566013.7572012.87550HepG2SRSF1
NECAB3ENSG00000125967.121002.52950622.035100.688505.420504.58710HepG2SRSF5
NECAB3ENSG00000125967.12795.77920541.092300.556407.172106.13380HepG2SRSF7
NECAB3ENSG00000125967.12695.28410876.30650-0.333803.366602.77010HepG2SRSF9
NECAB3ENSG00000125967.121387.565501080.759100.360404.749504.11330HepG2SSB
NECAB3ENSG00000125967.121326.65370707.389800.9071025.9432024.35860HepG2SUCLG1
NECAB3ENSG00000125967.12355.30120968.17370-1.4462035.5186033.80020HepG2TAF15
NECAB3ENSG00000125967.12560.30680411.480900.445302.714001.99550HepG2TARDBP
NECAB3ENSG00000125967.121084.13850412.923201.3925026.8959025.63300HepG2TIAL1
NECAB3ENSG00000125967.12650.45830416.582200.642808.257607.36600HepG2TRIM56
NECAB3ENSG00000125967.121015.06870615.500700.721609.852308.00890HepG2TUFM
NECAB3ENSG00000125967.12333.75030868.69780-1.3801012.9508011.55740HepG2U2AF1
NECAB3ENSG00000125967.12543.27420309.762800.810403.482702.63530HepG2UCHL5
NECAB3ENSG00000125967.121024.32230479.977401.093502.455101.51280HepG2UPF2
NECAB3ENSG00000125967.12562.51270917.23710-0.7054011.4204010.33620HepG2UTP3
NECAB3ENSG00000125967.12430.85770267.829100.685802.860601.74200HepG2XPO5
NECAB3ENSG00000125967.12848.16190516.325700.716002.446401.76050HepG2XRN2
NECAB3ENSG00000125967.12517.98510640.63450-0.306602.433601.79760HepG2ZC3H8
NECAB3ENSG00000125967.12507.35020839.15400-0.726006.796405.94260K562AQR
NECAB3ENSG00000125967.12516.03800374.497800.462403.339701.86900K562BCCIP
NECAB3ENSG00000125967.12568.97000361.921100.652606.830305.29490K562BCLAF1
NECAB3ENSG00000125967.12351.46350248.606100.499402.441501.62690K562BOP1
NECAB3ENSG00000125967.12395.24100247.254800.676604.800803.11110K562CIRBP
NECAB3ENSG00000125967.12377.21480264.313400.513003.084402.25660K562CPSF6
NECAB3ENSG00000125967.12412.14840274.571200.585904.064602.75180K562CSTF2
NECAB3ENSG00000125967.12895.230201201.79860-0.424904.646303.37100K562CELF1
NECAB3ENSG00000125967.12797.21170615.061000.374103.302701.97570K562DDX21
NECAB3ENSG00000125967.12571.87620385.515400.568804.893003.45470K562DDX3X
NECAB3ENSG00000125967.12847.18450703.124400.268802.164001.57600K562DDX47
NECAB3ENSG00000125967.12725.10860576.629200.330502.660701.95220K562EIF2S2
NECAB3ENSG00000125967.12278.67390187.093000.574703.108402.26700K562EIF3G
NECAB3ENSG00000125967.12477.45090362.705200.396502.767701.61430K562EIF4B
NECAB3ENSG00000125967.12573.09200351.779100.704006.256604.94670K562FIP1L1
NECAB3ENSG00000125967.12323.77870228.009700.505802.426701.57450K562FTO
NECAB3ENSG00000125967.1235.50320118.30490-1.736507.159905.90910K562G3BP2
NECAB3ENSG00000125967.12405.58550252.333300.684602.919802.10420K562GPKOW
NECAB3ENSG00000125967.12424.61340289.360000.553203.085802.09830K562HNRNPM
NECAB3ENSG00000125967.12772.67900476.914400.696006.857705.61390K562HSPD1
NECAB3ENSG00000125967.12455.53050230.779600.980902.854701.80900K562IGF2BP2
NECAB3ENSG00000125967.12311.87700511.34850-0.713303.340301.75490K562ILF2
NECAB3ENSG00000125967.12572.34370758.40680-0.406102.821901.98730K562KIF1C
NECAB3ENSG00000125967.12346.81200241.953900.519303.245102.23810K562MATR3
NECAB3ENSG00000125967.12788.059701069.04380-0.439903.749601.99470K562NOL12
NECAB3ENSG00000125967.12816.06640686.436800.249502.129701.46650K562NSUN2
NECAB3ENSG00000125967.12680.03920399.362900.767806.671305.29960K562PPIG
NECAB3ENSG00000125967.12587.06490374.453500.648604.673603.45320K562PSIP1
NECAB3ENSG00000125967.12328.28690235.569500.478702.783002.11640K562PTBP1
NECAB3ENSG00000125967.12633.363901066.27160-0.751508.751407.28660K562PUF60
NECAB3ENSG00000125967.12899.122001134.29010-0.335203.084101.95630K562PUM1
NECAB3ENSG00000125967.12330.12810220.183500.584203.237901.69910K562RBM34
NECAB3ENSG00000125967.12354.22140237.669100.575603.411802.18090K562NELFE
NECAB3ENSG00000125967.12530.17660260.884801.023004.700003.63310K562RPS19
NECAB3ENSG00000125967.12219.61000122.899700.837405.088203.90910K562SF3B4
NECAB3ENSG00000125967.12867.79550503.968400.783903.646602.06380K562SFPQ
NECAB3ENSG00000125967.12259.06410474.38350-0.872702.684201.48100K562SNRNP200
NECAB3ENSG00000125967.12486.15750324.057800.585102.505501.54080K562SRFBP1
NECAB3ENSG00000125967.12391.90610244.394400.681204.453703.06640K562SRSF4
NECAB3ENSG00000125967.12362.72770218.133800.733604.080502.76200K562SRSF5
NECAB3ENSG00000125967.12453.54500247.863000.871602.591701.61110K562SUPV3L1
NECAB3ENSG00000125967.12393.12880233.712400.750205.530804.51350K562TARDBP
NECAB3ENSG00000125967.12368.28640225.447300.707905.317004.13020K562TIA1
NECAB3ENSG00000125967.12350.43570221.277800.663204.199302.80650K562TRA2A
NECAB3ENSG00000125967.1247.62670114.54480-1.266104.895703.35640K562U2AF1
NECAB3ENSG00000125967.1249.55040118.34270-1.256005.605504.46180K562U2AF2
NECAB3ENSG00000125967.12500.00330262.454700.929804.957303.55160K562UCHL5
NECAB3ENSG00000125967.12866.30180727.844300.251102.002801.38480K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NECAB3 is not available on ENCORE database.





21 RBPs can affect the splicing of NECAB3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENECAB3ENSG00000125967.12chr20-322473023224735632246527322466403224745832247538-0.240000.000020.00090excludedHepG2SRSF1
SENECAB3ENSG00000125967.12chr20-322473023224735632246527322466403224745832247538-0.119000.001740.09524excludedHepG2IGF2BP3
A3SSNECAB3ENSG00000125967.12chr20-3224652732246729322465273224664032247302322473560.213000.000290.02720longerHepG2SF3A3
A3SSNECAB3ENSG00000125967.12chr20-3224652732246729322465273224664032247302322473560.147000.000010.00350longerHepG2MATR3
A3SSNECAB3ENSG00000125967.12chr20-3224652732246729322465273224664032247302322473560.156000.000200.02336longerHepG2SRSF1
A3SSNECAB3ENSG00000125967.12chr20-3225848932258710322584893225859832260203322602280.118000.000010.00175longerHepG2SRSF1
A3SSNECAB3ENSG00000125967.12chr20-3224652732246729322465273224664032247302322473560.109000.000130.03691longerHepG2NCBP2
A3SSNECAB3ENSG00000125967.12chr20-3224652732246729322465273224664032247302322473560.112000.000160.08421longerHepG2KHSRP
A3SSNECAB3ENSG00000125967.12chr20-3224652732246729322465273224664032247302322473560.154000.000070.01049longerHepG2RBM22
A3SSNECAB3ENSG00000125967.12chr20-3224628232246396322462823224636032246527322466640.094000.000960.07837longerHepG2RBM22
A3SSNECAB3ENSG00000125967.12chr20-3224652732246729322465273224664032247302322473560.112000.004910.02840longerK562AQR
A3SSNECAB3ENSG00000125967.12chr20-3225848932258706322584893225859832260203322602280.201000.010310.05426longerK562AQR
A3SSNECAB3ENSG00000125967.12chr20-3224574732245854322457473224583932246282322463600.063000.007190.03974longerK562AQR
A3SSNECAB3ENSG00000125967.12chr20-3224652732246729322465273224664032247302322473560.204000.000000.00053longerHepG2PCBP1
A3SSNECAB3ENSG00000125967.12chr20-3224652732246729322465273224664032247302322473560.212000.000000.00001longerHepG2SF3B4
A5SSNECAB3ENSG00000125967.12chr20-322473023224753832247458322475383224652732246640-0.313000.000130.01101shorterHepG2SRSF1
RINECAB3ENSG00000125967.12chr20-322473023224753832247302322473563224745832247538-0.417000.002340.09257excludedK562DROSHA
RINECAB3ENSG00000125967.12chr20-3225718032257518322571803225727832257492322575180.111000.005280.07722includedHepG2PCBP2
RINECAB3ENSG00000125967.12chr20-3225718032257518322571803225727832257492322575180.132000.000220.00399includedHepG2SF3A3
RINECAB3ENSG00000125967.12chr20-3225718032257518322571803225727832257492322575180.154000.004420.04959includedHepG2PRPF8
RINECAB3ENSG00000125967.12chr20-322476903224820132247690322478093224806432248201-0.457000.000200.00677excludedK562SRSF1
RINECAB3ENSG00000125967.12chr20-322476903224820132247690322478093224806432248201-0.247000.000020.00036excludedK562AGGF1
RINECAB3ENSG00000125967.12chr20-3225718032257518322571803225727832257492322575180.129000.006650.09356includedHepG2IGF2BP3
RINECAB3ENSG00000125967.12chr20-3225718032257518322571803225727832257492322575180.164000.000160.00789includedHepG2MATR3
RINECAB3ENSG00000125967.12chr20-3225718032257518322571803225727832257492322575180.138000.000040.00106includedHepG2PCBP1
RINECAB3ENSG00000125967.12chr20-3224769032248201322476903224780932248064322482010.221000.003210.06298includedHepG2SRSF1
RINECAB3ENSG00000125967.12chr20-3225718032257518322571803225727832257492322575180.134000.000050.00101includedHepG2TAF15
RINECAB3ENSG00000125967.12chr20-3224769032248201322476903224780932248064322482010.473000.000010.00033includedHepG2TAF15
RINECAB3ENSG00000125967.12chr20-3224730232247538322473023224735632247458322475380.769000.000000.00005includedHepG2U2AF1
RINECAB3ENSG00000125967.12chr20-3225718032257518322571803225727832257492322575180.108000.000380.00965includedHepG2G3BP1
RINECAB3ENSG00000125967.12chr20-3224769032248201322476903224780932248064322482010.304000.000090.00314includedHepG2G3BP1
RINECAB3ENSG00000125967.12chr20-3224489232245663322448923224495232245595322456630.196000.001300.02515includedHepG2TIAL1
RINECAB3ENSG00000125967.12chr20-3225718032257518322571803225727832257492322575180.127000.000250.00680includedHepG2TIAL1
RINECAB3ENSG00000125967.12chr20-3225718032257518322571803225727832257492322575180.064000.014200.08305includedHepG2SF3B4
RINECAB3ENSG00000125967.12chr20-3224769032248201322476903224784032248064322482010.104000.010430.06413includedHepG2SF3B4
RINECAB3ENSG00000125967.12chr20-3224769032248201322476903224780932248064322482010.418000.000000.00000includedHepG2FUBP3
RINECAB3ENSG00000125967.12chr20-3224730232247538322473023224735632247458322475380.219000.009380.07273includedHepG2RBM22
RINECAB3ENSG00000125967.12chr20-3225718032257518322571803225727832257492322575180.082000.007920.09163includedHepG2SRSF9
RINECAB3ENSG00000125967.12chr20-3225718032257518322571803225727832257492322575180.130000.000080.00152includedHepG2HNRNPK
RINECAB3ENSG00000125967.12chr20-3224769032248201322476903224780932248064322482010.295000.000220.00384includedHepG2HNRNPK
RINECAB3ENSG00000125967.12chr20-322448923224566332244892322449523224559532245663-0.115000.011410.06059excludedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NECAB3 is not avaliable on ENCORE database.