IFI30

General Information

Gene Name       : IFI30
Gene ID             : ENSG00000216490.3
Essential Gene : No

Functions

Localization

Domains (AlphaFold: IFI30)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878IFI30ENSG00000216490.392.49174.72133.60ENCSR000AEF
HepG2IFI30ENSG00000216490.353.6830.7642.22ENCSR985KAT
K562IFI30ENSG00000216490.3107.1472.4489.79ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for IFI30 is not avaliable on ENCORE database.



Proteins bound to RNA
  • IFI30 RNA is bound by 6 proteins.  







eCLIP assay for IFI30 is not avaliable on ENCORE database.





6 proteins are bound to IFI30 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr191828870118288763+3'-UTR,CDS4.456933.72779HepG2LARP4
chr191828871718288796+3'-UTR,CDS3.745885.28014HepG2LIN28B
chr191828590518286013+3'-UTR,CDS3.194897.42778K562YBX3
chr191828468118284721+3'-UTR,CDS3.597715.01580HepG2DDX3X
chr191828794918287987+3'-UTR,CDS,intron-Proximal4.788396.35450HepG2SND1
chr191828477318284783+3'-UTR,CDS4.219594.95438K562YBX3
chr191828585618285904+3'-UTR,CDS4.181904.95361HepG2SND1
chr191828612118286176+3'-UTR,CDS3.671623.21814HepG2SND1
chr191828642318286439+3'-UTR,CDS3.467565.32768K562YBX3
chr191828798518287994+3'-UTR,CDS3.456554.74241K562YBX3
chr191828854018288575+3'-UTR,CDS,intron-Proximal3.430703.01032HepG2LARP4
chr191828641418286423+3'-UTR,CDS,intron-Proximal4.161294.72754K562YBX3
chr191828590918286031+3'-UTR,CDS4.236094.12588K562SND1
chr191828592518285985+3'-UTR,CDS4.871715.23222HepG2SND1
chr191828618218286195+3'-UTR,CDS3.140383.87559K562YBX3
chr191828865718288701+3'-UTR,CDS,intron-Proximal4.525693.43895HepG2LARP4
chr191828799418288027+3'-UTR,CDS4.675087.18289K562YBX3
chr191828852418288575+3'-UTR,CDS,intron-Proximal4.648344.67599HepG2SND1
chr191828794718287997+3'-UTR,CDS,intron-Proximal3.757443.34921K562SND1
chr191828466018284753+3'-UTR,CDS4.0590616.38988HepG2RPS3
chr191828588918285905+3'-UTR,CDS3.969206.19204K562YBX3
chr191828641418286449+3'-UTR,CDS,intron-Proximal4.735253.19000HepG2SND1
chr191828798718288049+3'-UTR,CDS6.449929.13109HepG2SND1
chr191828805718288099+3'-UTR,CDS5.318263.19000HepG2SND1
chr191828584918285856+3'-UTR,CDS,intron-Proximal4.312045.13745K562YBX3
chr191828585618285889+3'-UTR,CDS4.8703615.90034K562YBX3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for IFI30 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for IFI30 is not available on ENCORE database.

  • 119 RBPs can affect the levels of IFI30.  








The Knockdown/knockout RNA-Seq assay for IFI30 is not available on ENCORE database.





119 RBPs can affect the gene expression of IFI30 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
IFI30ENSG00000216490.3427.39640290.648900.556204.837304.07510HepG2ACO1
IFI30ENSG00000216490.343.6755012.426701.813304.252701.35470HepG2AGGF1
IFI30ENSG00000216490.3610.97490149.125002.0345020.8287019.51120HepG2AKAP1
IFI30ENSG00000216490.3156.7695061.131601.358604.462803.15040HepG2AKAP8
IFI30ENSG00000216490.3469.29200292.050700.684206.937105.78240HepG2AKAP8L
IFI30ENSG00000216490.3290.17400123.377701.233708.970207.60940HepG2ASCC1
IFI30ENSG00000216490.3330.37720540.88800-0.711205.943104.99850HepG2AUH
IFI30ENSG00000216490.3223.86000383.05670-0.775005.173403.98010HepG2BCLAF1
IFI30ENSG00000216490.3153.15340252.44210-0.721003.738203.05310HepG2BOP1
IFI30ENSG00000216490.3213.06810290.62930-0.447902.597801.94880HepG2CKAP4
IFI30ENSG00000216490.3152.1766075.597201.009203.503302.63600HepG2CNOT7
IFI30ENSG00000216490.3163.85650272.27860-0.732704.322603.01120HepG2CSTF2
IFI30ENSG00000216490.3708.80290440.719100.685408.990607.95570HepG2CELF1
IFI30ENSG00000216490.3177.91520256.61950-0.528402.619501.49390HepG2DDX1
IFI30ENSG00000216490.3372.92930227.232700.714604.864703.99180HepG2DDX21
IFI30ENSG00000216490.3416.87500142.827401.5452015.5818014.21930HepG2DDX3X
IFI30ENSG00000216490.313.6764056.14070-2.037405.454603.67830HepG2DDX47
IFI30ENSG00000216490.3606.77500433.498600.485002.286701.57790HepG2DDX55
IFI30ENSG00000216490.3458.55560122.746001.9013011.4307010.27610HepG2DDX6
IFI30ENSG00000216490.3180.01970251.62420-0.483102.388901.72960HepG2DNAJC21
IFI30ENSG00000216490.3167.90920249.43010-0.571003.564002.84120HepG2DNAJC2
IFI30ENSG00000216490.3327.25570186.334600.812404.501503.35270HepG2EEF2
IFI30ENSG00000216490.3280.61930117.944801.250408.791907.77410HepG2EIF2S1
IFI30ENSG00000216490.3266.03970151.228000.814804.091903.00670HepG2EIF3D
IFI30ENSG00000216490.3209.87380130.316800.687402.706202.07370HepG2EIF4A3
IFI30ENSG00000216490.3290.00160467.51200-0.688906.362805.18490HepG2EIF4G1
IFI30ENSG00000216490.3183.01160447.84540-1.2911013.3930011.69300HepG2EIF4G2
IFI30ENSG00000216490.375.84280209.71100-1.467304.817403.41740HepG2ESF1
IFI30ENSG00000216490.3305.97280620.95520-1.021109.584108.57520HepG2ETF1
IFI30ENSG00000216490.3202.73690135.227800.584102.548001.42790HepG2FAM120A
IFI30ENSG00000216490.3147.92060216.53030-0.549702.437401.36190HepG2FASTKD2
IFI30ENSG00000216490.3207.05240360.80000-0.801205.416703.68430HepG2FKBP4
IFI30ENSG00000216490.3719.84370443.342600.699205.458103.14010HepG2FMR1
IFI30ENSG00000216490.381.84550232.15270-1.504105.670104.22000HepG2FTO
IFI30ENSG00000216490.364.07680135.67550-1.082304.740203.72690HepG2FUBP3
IFI30ENSG00000216490.3337.73360154.485001.128305.374403.84990HepG2FUS
IFI30ENSG00000216490.3468.36270131.563101.8318022.8713021.09440HepG2FXR1
IFI30ENSG00000216490.3216.5254069.975201.6295010.228608.09420HepG2GRSF1
IFI30ENSG00000216490.3233.94750501.90560-1.1012016.2949014.74760HepG2HNRNPF
IFI30ENSG00000216490.3338.07950123.635601.4512011.7964010.45170HepG2HNRNPK
IFI30ENSG00000216490.3578.31440431.660500.421902.063201.47060HepG2HNRNPL
IFI30ENSG00000216490.3308.88990168.623200.873205.140403.88690HepG2HNRNPM
IFI30ENSG00000216490.3174.02990280.70740-0.689704.810104.02900HepG2HNRNPU
IFI30ENSG00000216490.3217.7668066.467701.712003.616602.21030HepG2HSPD1
IFI30ENSG00000216490.3353.27540123.998201.510402.778902.10240HepG2IGF2BP2
IFI30ENSG00000216490.3278.93180116.426401.260404.678403.40750HepG2IGF2BP3
IFI30ENSG00000216490.3132.8191072.002300.883203.211701.90600HepG2KHDRBS1
IFI30ENSG00000216490.3794.21670349.248701.1852012.5216010.76990HepG2LARP4
IFI30ENSG00000216490.3443.54020289.188700.617003.888902.53530HepG2LARP7
IFI30ENSG00000216490.3309.38360131.609401.233009.158207.97660HepG2MAGOH
IFI30ENSG00000216490.31031.75180132.333202.9627065.9164063.14730HepG2MATR3
IFI30ENSG00000216490.3297.00850197.753300.586702.166901.44620HepG2MSI2
IFI30ENSG00000216490.384.60230255.69320-1.595609.134407.34280HepG2MTPAP
IFI30ENSG00000216490.3446.05770135.439901.719509.478808.34680HepG2NCBP2
IFI30ENSG00000216490.363.00610222.30410-1.8190012.4022010.92880HepG2NSUN2
IFI30ENSG00000216490.3137.8301069.086100.996303.341802.36120HepG2PABPC1
IFI30ENSG00000216490.3198.73690120.570100.720903.044202.28920HepG2PABPC4
IFI30ENSG00000216490.3244.57510334.30810-0.450902.106101.39680HepG2PRPF8
IFI30ENSG00000216490.3290.74790104.883401.470909.251608.36820HepG2PTBP1
IFI30ENSG00000216490.3914.55820448.555701.027703.596302.92800HepG2PUF60
IFI30ENSG00000216490.31004.59950475.814801.0780016.2811014.73700HepG2PUM2
IFI30ENSG00000216490.331.35360113.60490-1.857305.141804.33000HepG2QKI
IFI30ENSG00000216490.31062.27800519.015501.0332010.452709.58890HepG2RBM22
IFI30ENSG00000216490.3176.07110103.098600.772003.324002.59050HepG2RBM25
IFI30ENSG00000216490.3347.23590116.730501.5726017.4704016.33530HepG2NELFE
IFI30ENSG00000216490.3180.79090108.709000.733801.833501.31710HepG2RECQL
IFI30ENSG00000216490.3250.78720540.71770-1.1084012.5127011.24580HepG2RPLP0
IFI30ENSG00000216490.3271.38640147.185400.882605.561504.72360HepG2RPS19
IFI30ENSG00000216490.3515.76740328.304600.651604.211902.87260HepG2RPS5
IFI30ENSG00000216490.3181.51860330.68990-0.865405.326604.26850HepG2RRP9
IFI30ENSG00000216490.345.77890248.15580-2.4385023.1142021.30660HepG2SF3B1
IFI30ENSG00000216490.3200.64380109.208600.877504.548903.81880HepG2SF3B4
IFI30ENSG00000216490.3612.72020291.506201.0716019.2749017.81060HepG2SMN1
IFI30ENSG00000216490.3291.84690586.22970-1.006307.881007.15520HepG2SRFBP1
IFI30ENSG00000216490.3402.34620113.985501.8195025.2677024.15130HepG2SRSF1
IFI30ENSG00000216490.3902.02190442.886301.0261021.9138020.38350HepG2SRSF5
IFI30ENSG00000216490.3229.14180493.11540-1.1057016.0763014.63860HepG2SRSF7
IFI30ENSG00000216490.3306.1309092.729201.7230022.1607020.87270HepG2SRSF9
IFI30ENSG00000216490.3147.9288066.330301.157103.138001.77440HepG2SSRP1
IFI30ENSG00000216490.3125.7147065.998000.929603.517902.26370HepG2STIP1
IFI30ENSG00000216490.3629.43760503.681300.321502.603701.99660HepG2SUCLG1
IFI30ENSG00000216490.3332.34860102.441701.697803.801703.16190HepG2TAF15
IFI30ENSG00000216490.3133.48890244.36600-0.872303.612602.79800HepG2TARDBP
IFI30ENSG00000216490.3489.82290272.725100.844705.295104.64910HepG2TIAL1
IFI30ENSG00000216490.3353.34140275.200200.360502.101801.59740HepG2TRIM56
IFI30ENSG00000216490.3406.61370254.887300.673704.262403.31980HepG2UCHL5
IFI30ENSG00000216490.3284.09870424.77700-0.580303.530602.71840HepG2XRN2
IFI30ENSG00000216490.3123.73320220.41730-0.833002.087001.49090HepG2ZC3H8
IFI30ENSG00000216490.3723.855401002.74820-0.470203.853302.38510K562ABCF1
IFI30ENSG00000216490.31058.02100572.175600.8867017.7472016.43090K562AGGF1
IFI30ENSG00000216490.31120.69270595.362800.912405.806404.83870K562AKAP8L
IFI30ENSG00000216490.3791.784201360.71810-0.781209.007008.04590K562AQR
IFI30ENSG00000216490.3896.81060624.656500.521605.846404.45820K562ATP5C1
IFI30ENSG00000216490.3285.21960571.22840-1.0020010.207808.48080K562BOP1
IFI30ENSG00000216490.3484.37630698.47820-0.528103.589401.92660K562BUD13
IFI30ENSG00000216490.3410.05860567.51090-0.468802.917101.83140K562CCAR1
IFI30ENSG00000216490.3531.275501048.97610-0.9814021.8667020.20530K562DDX47
IFI30ENSG00000216490.3953.33540640.727300.573204.663603.48030K562DKC1
IFI30ENSG00000216490.3453.04550747.97060-0.723307.244005.70760K562EFTUD2
IFI30ENSG00000216490.3611.106301107.65850-0.8580017.0653015.50150K562EIF2S2
IFI30ENSG00000216490.3585.23900800.66500-0.452202.916901.85280K562EIF3D
IFI30ENSG00000216490.3497.53160672.75500-0.435303.075002.21130K562EIF4A3
IFI30ENSG00000216490.31186.839201542.39000-0.378003.829802.72730K562EIF4G2
IFI30ENSG00000216490.3487.53330720.83670-0.564204.728003.59690K562FIP1L1
IFI30ENSG00000216490.3476.26890780.75280-0.713106.283904.46420K562FKBP4
IFI30ENSG00000216490.3432.17490618.00820-0.516003.779602.77600K562FMR1
IFI30ENSG00000216490.3153.83010380.97160-1.308305.923604.80230K562G3BP2
IFI30ENSG00000216490.3834.953801347.31430-0.6903010.266708.36800K562HNRNPA1
IFI30ENSG00000216490.3411.56130898.40570-1.1263018.4938017.02990K562HNRNPC
IFI30ENSG00000216490.3567.49510802.49780-0.499904.329602.86210K562HNRNPF
IFI30ENSG00000216490.31058.003501492.11310-0.496006.945505.52670K562HNRNPU
IFI30ENSG00000216490.3802.91330631.870300.345502.215501.48650K562KIF1C
IFI30ENSG00000216490.3696.74530890.31240-0.353703.463502.56220K562MTPAP
IFI30ENSG00000216490.3672.43200496.146900.438502.093801.34860K562NAA15
IFI30ENSG00000216490.3493.46350671.78730-0.445103.382402.01450K562NCBP2
IFI30ENSG00000216490.31183.87650737.447000.682806.471904.33870K562NONO
IFI30ENSG00000216490.3818.49320497.661000.717703.085102.02830K562PABPN1
IFI30ENSG00000216490.3339.69380572.01040-0.751802.729101.75570K562PCBP2
IFI30ENSG00000216490.31146.72220818.313400.486704.427103.35480K562PPIG
IFI30ENSG00000216490.3542.09780727.86620-0.425102.841302.08280K562PRPF8
IFI30ENSG00000216490.3955.62310624.779500.613004.309803.49830K562PTBP1
IFI30ENSG00000216490.31471.300601790.29090-0.283103.184302.03540K562PUM1
IFI30ENSG00000216490.31154.69820590.521300.967408.322607.42920K562PUS1
IFI30ENSG00000216490.31167.80920575.303801.0213021.0811019.39080K562RBM15
IFI30ENSG00000216490.31076.969801399.83800-0.378303.484001.67270K562RBM17
IFI30ENSG00000216490.31182.65460735.279100.685609.407107.56060K562RCC2
IFI30ENSG00000216490.3577.85930741.27950-0.359302.037501.34220K562RPS19
IFI30ENSG00000216490.3901.80320692.025000.381902.908901.79980K562SAFB
IFI30ENSG00000216490.3807.17500976.10080-0.274102.292701.54480K562SF3A3
IFI30ENSG00000216490.3316.28930551.52240-0.802206.117104.63920K562SF3B1
IFI30ENSG00000216490.3648.809501000.03530-0.6242010.794109.08890K562SRPK2
IFI30ENSG00000216490.31220.162001491.94890-0.290103.478102.04650K562TROVE2
IFI30ENSG00000216490.3235.83590381.06730-0.692303.296502.42140K562U2AF2
IFI30ENSG00000216490.3785.244501048.89570-0.417705.338304.37530K562UPF1
IFI30ENSG00000216490.3666.77710897.50790-0.428703.781502.75640K562WDR3
IFI30ENSG00000216490.3572.13070933.29700-0.7060012.9596011.28900K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for IFI30 is not available on ENCORE database.





1 RBPs can affect the splicing of IFI30 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
RIIFI30ENSG00000216490.3chr19+1828794918288574182879491828810218288520182885740.080000.004070.05054includedK562U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for IFI30 is not avaliable on ENCORE database.