FAM175A

General Information

Gene Name       : FAM175A
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FAM175A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FAM175A is not avaliable on ENCORE database.



Proteins bound to RNA
  • FAM175A RNA is bound by 7 proteins.  







eCLIP assay for FAM175A is not avaliable on ENCORE database.





7 proteins are bound to FAM175A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr48438260984382675-3'-UTR,intron-Distal4.368943.98716K562IGF2BP1
chr48438273784382814-3'-UTR,intron-Distal4.821235.29045K562IGF2BP1
chr48438347984383578-3'-UTR,intron-Distal5.168676.23813HepG2SUB1
chr48438327184383402-3'-UTR,intron-Distal4.747574.31786K562IGF2BP2
chr48438217184382228-3'-UTR,intron-Distal4.141534.72754K562YBX3
chr48438284984382974-3'-UTR,intron-Distal3.434485.08461K562IGF2BP1
chr48439141084391467-3'-UTR,CDS,intron-Distal,intron-Proximal3.026763.94288K562YBX3
chr48438268484382737-3'-UTR,intron-Distal4.232793.50232K562IGF2BP1
chr48439339084393435-3'-UTR,CDS,intron-Distal4.798544.03091K562TROVE2
chr48438237684382450-3'-UTR,intron-Distal3.079353.89211K562PUM2
chr48438238984382463-3'-UTR,intron-Distal4.4568018.70653K562YBX3
chr48440619084406227-5'-UTR,CDS,intron-Distal,intron-Proximal4.6860110.61341K562TROVE2
chr48440622784406245-5'-UTR,intron-Distal,intron-Proximal6.1487611.52680K562TROVE2
chr48440602784406109-intron-Distal5.691926.11439HepG2XRN2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FAM175A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FAM175A is not available on ENCORE database.

  • 104 RBPs can affect the levels of FAM175A.  








The Knockdown/knockout RNA-Seq assay for FAM175A is not available on ENCORE database.





104 RBPs can affect the gene expression of FAM175A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FAM175AENSG00000163322.9562.33040865.92860-0.622802.477401.97130HepG2AKAP1
FAM175AENSG00000163322.9691.63070867.06640-0.326103.205202.47520HepG2AUH
FAM175AENSG00000163322.9197.10850327.65950-0.733203.475502.47220HepG2BCLAF1
FAM175AENSG00000163322.9140.80690454.85480-1.6917021.7280020.30160HepG2BOP1
FAM175AENSG00000163322.9251.54380420.15240-0.740107.842106.83100HepG2CKAP4
FAM175AENSG00000163322.9430.21910649.71980-0.594707.897406.74090HepG2DAZAP1
FAM175AENSG00000163322.9416.75410829.59770-0.993204.585103.79510HepG2DDX3X
FAM175AENSG00000163322.9324.50320712.39750-1.134405.695804.83700HepG2DDX6
FAM175AENSG00000163322.9315.75640422.08490-0.418702.328801.43080HepG2DHX30
FAM175AENSG00000163322.9255.73490433.74380-0.762208.813107.72730HepG2DNAJC2
FAM175AENSG00000163322.9264.29630479.17630-0.858405.496804.23450HepG2EEF2
FAM175AENSG00000163322.9289.53280399.52810-0.464602.342001.32430HepG2EFTUD2
FAM175AENSG00000163322.9318.36060685.08730-1.105605.162104.36640HepG2EIF2S1
FAM175AENSG00000163322.9260.71200389.02240-0.577402.306601.47430HepG2EIF3D
FAM175AENSG00000163322.9405.15530757.21910-0.902204.181303.40010HepG2EIF4A3
FAM175AENSG00000163322.9678.49860995.56210-0.553207.958207.02900HepG2ETF1
FAM175AENSG00000163322.9305.39260438.72070-0.522602.810002.01720HepG2FUBP3
FAM175AENSG00000163322.9294.44950708.58180-1.266906.735905.71770HepG2G3BP1
FAM175AENSG00000163322.9518.57840752.00680-0.536202.221701.42830HepG2G3BP2
FAM175AENSG00000163322.9357.15950520.34820-0.542903.057201.98380HepG2GNB2L1
FAM175AENSG00000163322.9215.55440491.43440-1.1889012.6208011.23530HepG2HNRNPC
FAM175AENSG00000163322.9315.34540461.90480-0.550704.768403.85920HepG2HNRNPF
FAM175AENSG00000163322.9504.00860717.06790-0.508702.142101.52260HepG2HNRNPK
FAM175AENSG00000163322.9277.58300454.84410-0.712506.353705.30080HepG2IGF2BP1
FAM175AENSG00000163322.9327.02450720.32430-1.139205.796804.85440HepG2IGF2BP2
FAM175AENSG00000163322.9718.07510498.666500.526006.836605.73590HepG2ILF2
FAM175AENSG00000163322.9554.45590772.86930-0.479202.677301.86060HepG2LARP4
FAM175AENSG00000163322.9353.61090763.91280-1.111205.957405.00650HepG2MAGOH
FAM175AENSG00000163322.9435.14050768.24600-0.820103.922603.18310HepG2MATR3
FAM175AENSG00000163322.9294.69160786.38940-1.416007.736806.70370HepG2NCBP2
FAM175AENSG00000163322.9274.96520410.20690-0.577102.353801.54720HepG2PABPC1
FAM175AENSG00000163322.9330.20110700.54640-1.085105.391704.39420HepG2PABPC4
FAM175AENSG00000163322.9410.43360730.92120-0.8326011.6026010.49700HepG2PCBP1
FAM175AENSG00000163322.9254.48220457.09700-0.844905.338403.92940HepG2PCBP2
FAM175AENSG00000163322.9329.91920443.04600-0.425303.043902.23760HepG2PRPF4
FAM175AENSG00000163322.9171.12760286.07340-0.741303.400802.51320HepG2PRPF8
FAM175AENSG00000163322.9498.40860743.70000-0.577406.670305.89400HepG2PTBP1
FAM175AENSG00000163322.9245.11790614.97520-1.3271019.6155018.22230HepG2PUF60
FAM175AENSG00000163322.9416.15190805.53000-0.9528015.0066013.71730HepG2QKI
FAM175AENSG00000163322.9201.85840441.12320-1.127806.714805.64220HepG2RAVER1
FAM175AENSG00000163322.91021.01510832.094500.295102.272701.79030HepG2RBM22
FAM175AENSG00000163322.9447.03830731.03830-0.709507.896906.80820HepG2RBM25
FAM175AENSG00000163322.9238.07570499.02260-1.067708.250806.43300HepG2RCC2
FAM175AENSG00000163322.9385.73310497.58870-0.367402.003701.41160HepG2RPLP0
FAM175AENSG00000163322.9215.43050378.50030-0.813105.296004.47690HepG2RPS19
FAM175AENSG00000163322.9412.76000566.80150-0.457502.212501.49280HepG2RPS2
FAM175AENSG00000163322.9329.21050450.50250-0.452502.024501.34080HepG2RPS3A
FAM175AENSG00000163322.9145.26670282.99760-0.962104.946203.92910HepG2RRP9
FAM175AENSG00000163322.9731.17360479.883500.607403.256401.59570HepG2RTF1
FAM175AENSG00000163322.9333.35380434.75420-0.383102.638202.00670HepG2SAFB2
FAM175AENSG00000163322.9177.67050450.44160-1.3421011.8569010.40160HepG2SF3A3
FAM175AENSG00000163322.9247.74180447.18430-0.852006.846105.77730HepG2SF3B1
FAM175AENSG00000163322.9386.32290774.35880-1.0032017.8210016.52070HepG2SF3B4
FAM175AENSG00000163322.9373.41760808.23390-1.1140022.3148021.24810HepG2SRSF1
FAM175AENSG00000163322.9421.39930607.16510-0.526905.483404.64560HepG2SRSF5
FAM175AENSG00000163322.9252.48560453.80720-0.845909.407708.25620HepG2SRSF7
FAM175AENSG00000163322.9541.65750657.51640-0.279602.225601.71900HepG2SRSF9
FAM175AENSG00000163322.9618.84950815.93440-0.398904.326403.71520HepG2SSB
FAM175AENSG00000163322.9514.73230667.54040-0.375002.785301.94690HepG2TIA1
FAM175AENSG00000163322.9156.99790474.38430-1.5953024.6511023.44060HepG2TIAL1
FAM175AENSG00000163322.9679.78070442.910400.618003.480101.84500HepG2TRA2A
FAM175AENSG00000163322.9288.02880478.60280-0.732608.264707.37260HepG2TRIM56
FAM175AENSG00000163322.9370.41740600.75930-0.697606.811305.34450HepG2TUFM
FAM175AENSG00000163322.9288.98040440.81860-0.609204.274303.50270HepG2U2AF1
FAM175AENSG00000163322.9176.88730399.47400-1.1753015.2217013.83670HepG2UPF1
FAM175AENSG00000163322.9735.29590433.754700.761305.086903.35580HepG2XRCC5
FAM175AENSG00000163322.9264.32190437.24250-0.726107.637506.61160HepG2ZC3H8
FAM175AENSG00000163322.9243.41610439.34330-0.8519010.427209.53590HepG2ZNF622
FAM175AENSG00000163322.9960.759801310.52430-0.447903.266201.96920K562AARS
FAM175AENSG00000163322.92487.176902984.50900-0.263003.818803.17110K562AGGF1
FAM175AENSG00000163322.92310.556803105.48330-0.426604.911804.03150K562AKAP8L
FAM175AENSG00000163322.91166.796501489.41010-0.352202.641501.70560K562BCLAF1
FAM175AENSG00000163322.92772.281603566.76130-0.363504.859803.25760K562CCDC124
FAM175AENSG00000163322.91715.041302139.69040-0.319202.802601.69100K562CPEB4
FAM175AENSG00000163322.91600.018302213.63760-0.468306.546905.60440K562DDX47
FAM175AENSG00000163322.9794.462601206.54160-0.602804.377602.73190K562EEF2
FAM175AENSG00000163322.9479.202401165.77520-1.2826022.8496019.80180K562EFTUD2
FAM175AENSG00000163322.9472.587801248.22430-1.4012022.3922019.44530K562EIF3D
FAM175AENSG00000163322.9998.430401424.07770-0.512307.650006.33240K562EIF3G
FAM175AENSG00000163322.91014.098901291.77510-0.349203.188701.78190K562EWSR1
FAM175AENSG00000163322.91855.134701408.527200.397203.731402.73550K562FIP1L1
FAM175AENSG00000163322.91751.756001244.954100.492604.407402.92600K562FKBP4
FAM175AENSG00000163322.9801.390201538.98170-0.9414023.4594021.81650K562FXR1
FAM175AENSG00000163322.92769.333501560.537400.827408.911707.49690K562G3BP2
FAM175AENSG00000163322.92814.719801775.849900.6644012.0537010.05030K562HNRNPA1
FAM175AENSG00000163322.9572.681101433.97410-1.3242030.8384028.92340K562HNRNPC
FAM175AENSG00000163322.9994.907101280.54190-0.364103.075201.86560K562HNRNPF
FAM175AENSG00000163322.91360.960802000.63970-0.555807.636005.79180K562HNRNPL
FAM175AENSG00000163322.92380.033201966.508300.275203.041902.10740K562HNRNPU
FAM175AENSG00000163322.92999.654901909.631300.651409.295507.85330K562HSPD1
FAM175AENSG00000163322.9838.13670593.339500.498203.816302.05480K562ILF3
FAM175AENSG00000163322.9795.95040573.331800.473203.559001.87920K562KHDRBS1
FAM175AENSG00000163322.91595.906001025.457400.638005.204703.87070K562KRR1
FAM175AENSG00000163322.9958.074601388.62280-0.535405.925703.79130K562LARP7
FAM175AENSG00000163322.91460.251601847.28040-0.339203.303602.37800K562MAGOH
FAM175AENSG00000163322.93056.752203692.12520-0.272502.992902.03730K562MBNL1
FAM175AENSG00000163322.92135.527101748.194100.288605.252104.27120K562NSUN2
FAM175AENSG00000163322.91091.137401890.09950-0.792603.379802.25240K562PABPN1
FAM175AENSG00000163322.91437.439701805.60700-0.329003.234501.77290K562PCBP1
FAM175AENSG00000163322.9665.327501643.66240-1.3048030.2594027.11090K562PCBP2
FAM175AENSG00000163322.9444.705501134.43260-1.3510023.7254021.51490K562PRPF8
FAM175AENSG00000163322.9915.794801285.70840-0.489504.383903.20640K562PSIP1
FAM175AENSG00000163322.9738.113401794.73210-1.2819035.3212033.05420K562PTBP1
FAM175AENSG00000163322.91706.555003128.00610-0.8742018.0578015.90980K562PUF60
FAM175AENSG00000163322.92170.135803080.02810-0.505205.959405.20010K562PUS1
FAM175AENSG00000163322.92468.065303000.82380-0.282003.402502.75590K562RBM15
FAM175AENSG00000163322.92292.997001805.638200.344603.429801.63710K562RBM17
FAM175AENSG00000163322.91098.355601721.05440-0.647908.595406.99270K562RBM22
FAM175AENSG00000163322.91299.697101677.60730-0.368202.880201.46900K562RBM34
FAM175AENSG00000163322.9575.696201173.04380-1.0269018.6626016.12110K562RCC2
FAM175AENSG00000163322.9553.028901155.57070-1.0632013.3483011.53110K562RPS19
FAM175AENSG00000163322.9864.023401843.86210-1.0936018.6267015.93290K562RPS3
FAM175AENSG00000163322.91832.137201159.935600.659405.535003.65740K562RRP9
FAM175AENSG00000163322.91027.471401728.26780-0.750202.791401.57990K562SF1
FAM175AENSG00000163322.91043.872001622.89090-0.6366010.261308.56730K562SF3B4
FAM175AENSG00000163322.91219.204501985.23970-0.703402.692701.48530K562SNRNP200
FAM175AENSG00000163322.9493.239401759.41100-1.8347061.7778058.76110K562SRSF1
FAM175AENSG00000163322.92594.874801468.923200.8208017.9557014.90780K562SSB
FAM175AENSG00000163322.92320.372801848.042800.328302.672701.34200K562SSRP1
FAM175AENSG00000163322.9898.361301214.66950-0.435204.631203.56250K562SYNCRIP
FAM175AENSG00000163322.91446.817401780.69220-0.299602.122601.49780K562TARDBP
FAM175AENSG00000163322.91408.738801717.66460-0.286002.503601.72990K562TIA1
FAM175AENSG00000163322.91030.556201313.76780-0.350302.739601.80000K562TRIM56
FAM175AENSG00000163322.91679.318301162.519000.530505.366503.90440K562UCHL5
FAM175AENSG00000163322.92420.911901586.104100.610009.943008.24510K562WDR3
FAM175AENSG00000163322.93951.297002746.526900.524606.562304.56740K562WRN
FAM175AENSG00000163322.93604.513302610.002000.465705.829204.50320K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FAM175A is not available on ENCORE database.





12 RBPs can affect the splicing of FAM175A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEFAM175AENSG00000163322.9chr4-8440514484405319844033068440339784406138844062560.383000.005610.08298includedHepG2U2AF1
SEFAM175AENSG00000163322.9chr4-843933748439344184391355843915498439779584397832-0.166000.001030.01442excludedHepG2U2AF2
SEFAM175AENSG00000163322.9chr4-8440514484405319844033068440339784406138844062560.114000.003050.03102includedK562AQR
SEFAM175AENSG00000163322.9chr4-8440514484405319844033068440339784406138844062560.173000.000020.00321includedK562SUPV3L1
SEFAM175AENSG00000163322.9chr4-843933748439344184391355843915498439779584397832-0.286000.000500.01758excludedHepG2SF3A3
SEFAM175AENSG00000163322.9chr4-8440514484405319844033068440339784406138844062560.126000.000260.01308includedK562TARDBP
SEFAM175AENSG00000163322.9chr4-8440514484405319844033068440339784406138844062560.240000.000000.00000includedK562HNRNPU
SEFAM175AENSG00000163322.9chr4-8440514484405319844033068440339784406138844062560.209000.000110.04613includedHepG2XRN2
SEFAM175AENSG00000163322.9chr4-844051448440531984403306844033978440613884406256-0.087000.000360.02102excludedK562HNRNPK
SEFAM175AENSG00000163322.9chr4-8440514484405319844033068440339784406138844062560.241000.000300.01716includedHepG2HNRNPU
SEFAM175AENSG00000163322.9chr4-843933748439344184391355843915498439779584397832-0.134000.001390.02537excludedK562HNRNPC
MXEFAM175AENSG00000163322.9chr4-84393374843934418439779584397832843913558439154984403306844033970.313000.003070.078261includedHepG2SF3A3
MXEFAM175AENSG00000163322.9chr4-84388606843886918439018484390304843846468438476184391355843915490.195000.000400.029881includedHepG2AKAP1
MXEFAM175AENSG00000163322.9chr4-84390184843903048439135584391549843886068438869184393374843934410.130000.005270.085611includedK562FXR2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for FAM175A is not avaliable on ENCORE database.