ERVK3-1

General Information

Gene Name       : ERVK3-1
Gene ID             : ENSG00000142396.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ERVK3-1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ERVK3-1ENSG00000142396.1066.0768.5567.31ENCSR000AEF
HepG2ERVK3-1ENSG00000142396.1038.0843.8640.97ENCSR985KAT
K562ERVK3-1ENSG00000142396.1098.42103.15100.78ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ERVK3-1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ERVK3-1 RNA is bound by 7 proteins.  







eCLIP assay for ERVK3-1 is not avaliable on ENCORE database.





7 proteins are bound to ERVK3-1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr195882500258825105+intron-Distal3.111783.65621HepG2HNRNPL
chr195882353658823625+3'-UTR,intron-Proximal3.598626.43326K562UCHL5
chr195882354058823630+3'-UTR,intron-Proximal3.668713.02267HepG2SRSF1
chr195882353558823613+3'-UTR,intron-Proximal3.945374.12025K562YBX3
chr195881752258817599+3'-UTR,intron-Proximal3.448116.92192K562UCHL5
chr195881675158816812+intron-Distal,intron-Proximal5.3862316.45884K562DDX3X
chr195882609558826165+3'-UTR,intron-Proximal3.444056.36450HepG2U2AF2
chr195882610758826213+3'-UTR,intron-Proximal3.848814.51739HepG2BCLAF1
chr195881745258817466+3'-UTR,intron-Proximal4.0108916.12600K562DDX3X
chr195881745158817522+3'-UTR,intron-Proximal3.818785.57819K562UCHL5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ERVK3-1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ERVK3-1 is not available on ENCORE database.

  • 127 RBPs can affect the levels of ERVK3-1.  








The Knockdown/knockout RNA-Seq assay for ERVK3-1 is not available on ENCORE database.





127 RBPs can affect the gene expression of ERVK3-1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ERVK3-1ENSG00000142396.61133.60180701.861400.691606.378705.01470HepG2ABCF1
ERVK3-1ENSG00000142396.6662.61110466.514800.506105.688904.87840HepG2ACO1
ERVK3-1ENSG00000142396.6940.36800401.211001.2288014.5861013.46330HepG2AKAP1
ERVK3-1ENSG00000142396.6615.53720468.707400.393103.336702.50380HepG2AKAP8L
ERVK3-1ENSG00000142396.6709.67830547.010600.375502.186601.35650HepG2BCCIP
ERVK3-1ENSG00000142396.61554.201601095.481000.504505.367404.56780HepG2BOP1
ERVK3-1ENSG00000142396.6788.75840599.257100.396303.058002.24980HepG2CALR
ERVK3-1ENSG00000142396.6620.56640315.388700.976409.913808.53010HepG2CIRBP
ERVK3-1ENSG00000142396.6669.34280466.414300.521006.203105.27930HepG2CKAP4
ERVK3-1ENSG00000142396.6776.837001005.72300-0.372502.515501.85430HepG2CPSF6
ERVK3-1ENSG00000142396.6485.27540337.961200.521803.694102.46630HepG2CSTF2
ERVK3-1ENSG00000142396.6938.67630622.175000.593208.633207.61860HepG2CELF1
ERVK3-1ENSG00000142396.6554.17670431.459800.361003.126902.24430HepG2DDX19B
ERVK3-1ENSG00000142396.6804.57220420.325400.9366012.1470010.84230HepG2DDX21
ERVK3-1ENSG00000142396.6600.21050411.431500.544704.468403.29640HepG2DDX24
ERVK3-1ENSG00000142396.6570.22470384.315600.569103.655202.94620HepG2DDX3X
ERVK3-1ENSG00000142396.6893.24910634.168700.494102.496501.53210HepG2DDX5
ERVK3-1ENSG00000142396.6685.01760446.328500.617907.276406.27420HepG2DKC1
ERVK3-1ENSG00000142396.6781.48760489.394300.675105.818004.52300HepG2EEF2
ERVK3-1ENSG00000142396.6611.42310408.004600.583504.359302.96540HepG2EFTUD2
ERVK3-1ENSG00000142396.6444.54050317.365700.486102.522601.95610HepG2EIF2S1
ERVK3-1ENSG00000142396.6841.86020532.599400.660407.980406.12020HepG2EIF2S2
ERVK3-1ENSG00000142396.6725.07250397.291900.867808.740807.22390HepG2EIF3D
ERVK3-1ENSG00000142396.6533.44740397.003300.426102.907101.80150HepG2EIF3G
ERVK3-1ENSG00000142396.6883.03740350.710301.3321017.8295016.22000HepG2EIF4A3
ERVK3-1ENSG00000142396.6530.25450341.496500.634703.365202.61010HepG2EIF4B
ERVK3-1ENSG00000142396.6814.43240608.141500.421303.275002.09100HepG2ESF1
ERVK3-1ENSG00000142396.61028.04640786.264600.386704.355403.63090HepG2ETF1
ERVK3-1ENSG00000142396.6702.46150455.869100.623706.202404.95220HepG2EWSR1
ERVK3-1ENSG00000142396.61103.27700708.760500.638305.502604.45190HepG2FIP1L1
ERVK3-1ENSG00000142396.6458.45990249.033100.880408.017906.71590HepG2FUBP3
ERVK3-1ENSG00000142396.6843.80430582.884600.533603.029601.86050HepG2FUS
ERVK3-1ENSG00000142396.6599.13170353.900800.759406.215405.20520HepG2FXR1
ERVK3-1ENSG00000142396.6663.42530328.269201.0150010.469709.21680HepG2G3BP1
ERVK3-1ENSG00000142396.6610.33260348.533400.808207.138005.69410HepG2G3BP2
ERVK3-1ENSG00000142396.6545.70080353.741000.625304.748203.57310HepG2GEMIN5
ERVK3-1ENSG00000142396.6605.86020424.298500.513803.375602.24530HepG2GNB2L1
ERVK3-1ENSG00000142396.6859.218801140.09750-0.408102.629002.00220HepG2GPKOW
ERVK3-1ENSG00000142396.6899.03040397.023901.1790015.1281013.81290HepG2HNRNPA1
ERVK3-1ENSG00000142396.6810.10390441.614900.8752010.254008.99370HepG2HNRNPC
ERVK3-1ENSG00000142396.6490.68980332.462200.561503.555502.76960HepG2HNRNPK
ERVK3-1ENSG00000142396.6721.99020489.149900.561605.515604.22040HepG2HNRNPM
ERVK3-1ENSG00000142396.6663.20310333.669400.9909010.442909.21900HepG2IGF2BP2
ERVK3-1ENSG00000142396.6759.89990313.171101.278806.293504.84150HepG2IGF2BP3
ERVK3-1ENSG00000142396.6542.22620448.112800.274901.993501.35900HepG2ILF2
ERVK3-1ENSG00000142396.6553.70040335.631400.722104.542103.22630HepG2KHSRP
ERVK3-1ENSG00000142396.61349.60760863.033200.645005.185404.03550HepG2LARP4
ERVK3-1ENSG00000142396.6838.44570354.024601.2438016.5665015.02860HepG2MAGOH
ERVK3-1ENSG00000142396.6743.18780355.998101.0618010.870309.68020HepG2MATR3
ERVK3-1ENSG00000142396.6694.30220415.810900.739504.231202.94260HepG2METAP2
ERVK3-1ENSG00000142396.61040.05010573.839700.8578013.0383011.41920HepG2MSI2
ERVK3-1ENSG00000142396.6803.99080364.377401.1416013.5103012.17680HepG2NCBP2
ERVK3-1ENSG00000142396.6770.99720964.70840-0.323402.023301.37890HepG2NSUN2
ERVK3-1ENSG00000142396.6519.01250324.472200.677604.835803.89270HepG2PABPC4
ERVK3-1ENSG00000142396.6641.44530434.234100.562806.107704.92670HepG2PARN
ERVK3-1ENSG00000142396.6490.61660336.695100.543104.663603.91010HepG2PCBP1
ERVK3-1ENSG00000142396.6460.64540328.548200.487503.468302.09050HepG2PKM
ERVK3-1ENSG00000142396.6894.21830580.091100.624203.737202.33070HepG2PRPF6
ERVK3-1ENSG00000142396.6635.50720415.018400.614604.878103.83880HepG2PRPF8
ERVK3-1ENSG00000142396.6610.38700342.577800.833205.985605.24350HepG2PTBP1
ERVK3-1ENSG00000142396.61144.32260672.190600.7675019.2673017.98890HepG2PUM1
ERVK3-1ENSG00000142396.6848.93750671.683500.337802.754702.08610HepG2PUM2
ERVK3-1ENSG00000142396.6729.77490475.175700.618908.575707.59220HepG2PUS1
ERVK3-1ENSG00000142396.6590.37470371.067100.669906.311205.42250HepG2QKI
ERVK3-1ENSG00000142396.6910.89550532.540300.774304.461603.57740HepG2RAVER1
ERVK3-1ENSG00000142396.61033.95670657.161800.653809.426108.59860HepG2RBM22
ERVK3-1ENSG00000142396.6478.83010336.749500.507703.323302.59000HepG2RBM25
ERVK3-1ENSG00000142396.6677.40460501.209900.434502.779301.78480HepG2RBM27
ERVK3-1ENSG00000142396.6640.50470407.004100.654104.534103.17290HepG2RCC2
ERVK3-1ENSG00000142396.6683.87980381.274500.8428011.1620010.21280HepG2NELFE
ERVK3-1ENSG00000142396.6524.34890355.072200.562304.843304.05740HepG2RECQL
ERVK3-1ENSG00000142396.61505.053601119.667200.426603.673502.90450HepG2RPLP0
ERVK3-1ENSG00000142396.6887.58510386.571601.1990020.5523019.11740HepG2RPS19
ERVK3-1ENSG00000142396.6717.45650462.257600.634105.392204.29670HepG2RPS2
ERVK3-1ENSG00000142396.6577.07420429.046300.427501.990001.31180HepG2RPS3A
ERVK3-1ENSG00000142396.6704.96870388.002200.861409.120107.43630HepG2SERBP1
ERVK3-1ENSG00000142396.61676.18210847.894300.9831010.142208.78730HepG2SF3A3
ERVK3-1ENSG00000142396.6633.49030356.707200.8285010.657809.61410HepG2SF3B4
ERVK3-1ENSG00000142396.6761.14230455.597300.7403012.4989011.28600HepG2SMN1
ERVK3-1ENSG00000142396.61109.58770742.222700.580009.362508.59070HepG2SRFBP1
ERVK3-1ENSG00000142396.6868.16000372.309001.2214025.6893024.56720HepG2SRSF1
ERVK3-1ENSG00000142396.6877.47860625.219100.488906.267205.37860HepG2SRSF5
ERVK3-1ENSG00000142396.6396.98620302.879300.390201.982601.50090HepG2SRSF9
ERVK3-1ENSG00000142396.61217.58530644.394600.9179022.5153021.36070HepG2SSB
ERVK3-1ENSG00000142396.6909.41640711.019700.355004.064803.33600HepG2SUCLG1
ERVK3-1ENSG00000142396.6729.51420535.412700.446202.869302.18180HepG2SUPV3L1
ERVK3-1ENSG00000142396.6537.19730334.601100.682906.599505.79800HepG2TAF15
ERVK3-1ENSG00000142396.6929.13810426.277201.1240017.8433016.77750HepG2TIAL1
ERVK3-1ENSG00000142396.6804.48000618.647300.378802.995102.08100HepG2TUFM
ERVK3-1ENSG00000142396.61168.72880606.421200.9464013.5890012.16030HepG2U2AF1
ERVK3-1ENSG00000142396.6759.74640490.389700.631504.128602.89190HepG2UPF2
ERVK3-1ENSG00000142396.61568.58250725.982601.1114036.0894034.29900HepG2UTP3
ERVK3-1ENSG00000142396.6704.12580527.053800.417802.826702.09470HepG2XRN2
ERVK3-1ENSG00000142396.6763.50920609.271200.325501.997601.41270HepG2ZC3H8
ERVK3-1ENSG00000142396.61212.02410827.004900.5514010.829809.92430HepG2ZNF622
ERVK3-1ENSG00000142396.61484.054701064.663300.479005.029403.37610K562AARS
ERVK3-1ENSG00000142396.61019.729701768.56280-0.7944020.6119019.17500K562AGGF1
ERVK3-1ENSG00000142396.61367.355701943.27290-0.507106.059504.46680K562AKAP8
ERVK3-1ENSG00000142396.61297.712501840.24260-0.503905.897504.91980K562AKAP8L
ERVK3-1ENSG00000142396.63794.326502018.146000.9107018.0997016.76490K562AQR
ERVK3-1ENSG00000142396.61408.531501930.80630-0.455006.935105.39700K562ATP5C1
ERVK3-1ENSG00000142396.61048.392201273.99770-0.281203.140002.12070K562BCLAF1
ERVK3-1ENSG00000142396.61736.360902113.61760-0.283602.887801.68030K562CCDC124
ERVK3-1ENSG00000142396.61550.428302178.20030-0.490506.664705.44110K562CPSF6
ERVK3-1ENSG00000142396.63816.053902605.185000.550608.540007.47600K562DDX47
ERVK3-1ENSG00000142396.61628.863801980.40280-0.281903.321002.35120K562DKC1
ERVK3-1ENSG00000142396.61443.32940888.237500.700304.568603.24680K562EIF3A
ERVK3-1ENSG00000142396.61631.232601185.759200.460103.515102.33680K562EIF3D
ERVK3-1ENSG00000142396.61614.754701014.826600.6700012.5444010.81740K562EIF3G
ERVK3-1ENSG00000142396.61033.28470668.237000.628706.845505.56510K562EIF4A3
ERVK3-1ENSG00000142396.63249.581002726.003000.253402.550301.64360K562EIF4G2
ERVK3-1ENSG00000142396.6836.561401085.68950-0.376103.012701.34110K562FASTKD2
ERVK3-1ENSG00000142396.61484.097401878.63900-0.340102.566801.68930K562FTO
ERVK3-1ENSG00000142396.61897.69410694.932601.4492055.0235052.53370K562FXR1
ERVK3-1ENSG00000142396.61624.011802079.59600-0.356703.310902.44440K562GPKOW
ERVK3-1ENSG00000142396.61568.729601164.858400.429304.506103.76270K562HNRNPC
ERVK3-1ENSG00000142396.61307.342601040.262800.329602.720501.58800K562HNRNPF
ERVK3-1ENSG00000142396.62734.716401935.287300.498704.562003.34280K562HNRNPM
ERVK3-1ENSG00000142396.61129.944501450.88700-0.360704.108603.01160K562HNRNPU
ERVK3-1ENSG00000142396.61405.884501953.05230-0.474305.750004.46050K562KIF1C
ERVK3-1ENSG00000142396.61339.971301775.84470-0.406302.472101.59360K562KRR1
ERVK3-1ENSG00000142396.61189.35600923.970500.364203.175002.27180K562MAGOH
ERVK3-1ENSG00000142396.61311.543801869.47460-0.511406.075304.25000K562MAK16
ERVK3-1ENSG00000142396.61144.59180922.085000.311802.464701.59800K562MATR3
ERVK3-1ENSG00000142396.61441.695302187.89870-0.601809.823607.90950K562MBNL1
ERVK3-1ENSG00000142396.62134.497801733.251400.300302.851802.03050K562MTPAP
ERVK3-1ENSG00000142396.61183.298001533.55020-0.374102.158101.40110K562NAA15
ERVK3-1ENSG00000142396.63675.635502981.513900.301803.173201.56470K562NOL12
ERVK3-1ENSG00000142396.61186.97830822.091700.529805.439504.05800K562PCBP2
ERVK3-1ENSG00000142396.61468.709801137.296300.368803.091301.57170K562PHF6
ERVK3-1ENSG00000142396.62029.213201703.152900.252602.331201.59640K562POLR2G
ERVK3-1ENSG00000142396.61890.692201077.604700.8110011.9891010.41900K562PRPF8
ERVK3-1ENSG00000142396.61453.03370897.700600.6947010.977409.71720K562PTBP1
ERVK3-1ENSG00000142396.64112.826602974.369700.467406.004104.80600K562PUF60
ERVK3-1ENSG00000142396.63784.385403163.037800.258603.360702.18040K562PUM1
ERVK3-1ENSG00000142396.61161.916201825.20970-0.651608.393707.49560K562PUS1
ERVK3-1ENSG00000142396.61120.225001778.23110-0.6667012.6022011.33990K562RBM15
ERVK3-1ENSG00000142396.61101.54990860.748000.355802.705301.87490K562RBM22
ERVK3-1ENSG00000142396.61670.159401097.728400.605405.718404.53920K562RPS19
ERVK3-1ENSG00000142396.61380.71170947.193200.543604.881603.50590K562RPS3
ERVK3-1ENSG00000142396.61937.482601517.632700.352303.354902.16140K562SAFB
ERVK3-1ENSG00000142396.61045.40300689.207500.600907.913306.42240K562SF3B4
ERVK3-1ENSG00000142396.61175.71020880.054100.417803.965503.12530K562SRSF1
ERVK3-1ENSG00000142396.62542.793101708.343000.573709.822108.26740K562SYNCRIP
ERVK3-1ENSG00000142396.6829.90250663.528700.322702.459701.70160K562U2AF2
ERVK3-1ENSG00000142396.62939.941101816.955300.694208.958707.52580K562WDR43
ERVK3-1ENSG00000142396.62167.942301252.803500.791104.643202.45610K562XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ERVK3-1 is not available on ENCORE database.





27 RBPs can affect the splicing of ERVK3-1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEERVK3-1ENSG00000142396.6chr19+5882353158823828588174535881758258826113588270230.154000.000000.00000includedK562SRSF1
SEERVK3-1ENSG00000142396.6chr19+588235315882382858817400588175825882611358827023-0.123000.005950.08458excludedK562SF3B4
SEERVK3-1ENSG00000142396.6chr19+588235315882382858817453588175825882611358827023-0.111000.000130.06732excludedK562SMNDC1
SEERVK3-1ENSG00000142396.6chr19+5882353158823828588174535881758258826113588270230.120000.000010.00324includedK562MATR3
SEERVK3-1ENSG00000142396.6chr19+5882338658823427588174535881758258823531588237690.144000.000550.01231includedHepG2U2AF1
SEERVK3-1ENSG00000142396.6chr19+588235315882382858817453588175825882611358827023-0.351000.000000.00000excludedK562AKAP8L
SEERVK3-1ENSG00000142396.6chr19+5882363158823828588174005881758258826113588270230.052000.000230.06220includedK562PUM1
SEERVK3-1ENSG00000142396.6chr19+588235315882382858817453588175825882611358827023-0.273000.000010.00049excludedHepG2HNRNPK
SEERVK3-1ENSG00000142396.6chr19+5882353158823828588174005881758258826113588270230.128000.000000.00000includedK562FXR1
SEERVK3-1ENSG00000142396.6chr19+588235315882382858817453588175825882611358827023-0.496000.000000.00000excludedK562PUS1
SEERVK3-1ENSG00000142396.6chr19+588235315882382858817453588175825882611358827023-0.075000.000000.00244excludedK562NSUN2
SEERVK3-1ENSG00000142396.6chr19+588235315882376958817453588175825882611358826147-0.097000.000310.06484excludedK562GPKOW
SEERVK3-1ENSG00000142396.6chr19+588235315882356258817400588175825882611358827023-0.107000.000940.09822excludedK562LARP4
SEERVK3-1ENSG00000142396.6chr19+5882356258823828588174005881758258826113588265680.066000.000130.03488includedK562APOBEC3C
SEERVK3-1ENSG00000142396.6chr19+588235315882382858817400588175825882611358827023-0.255000.000000.00000excludedK562U2AF1
SEERVK3-1ENSG00000142396.6chr19+5882338658823427588174535881758258823531588237690.102000.000070.00790includedHepG2HNRNPL
SEERVK3-1ENSG00000142396.6chr19+588235315882382858817453588175825882611358827023-0.097000.000000.00003excludedK562HNRNPL
SEERVK3-1ENSG00000142396.6chr19+588235315882382858817400588175825882611358827023-0.105000.000000.00001excludedK562HNRNPUL1
SEERVK3-1ENSG00000142396.6chr19+588235315882382858817453588175825882611358827023-0.311000.000000.00001excludedK562UTP18
SEERVK3-1ENSG00000142396.6chr19+588235315882382858817453588175825882611358827023-0.173000.000000.00000excludedK562HNRNPU
SEERVK3-1ENSG00000142396.6chr19+588235315882382858817400588175825882611358827023-0.369000.000000.00000excludedK562RBM15
SEERVK3-1ENSG00000142396.6chr19+588235315882382858817400588175825882611358827023-0.426000.000000.00000excludedK562AGGF1
SEERVK3-1ENSG00000142396.6chr19+588235315882376958817453588175825882611358826147-0.245000.000090.04568excludedK562NCBP2
SEERVK3-1ENSG00000142396.6chr19+588235315882382858817453588175825882611358827023-0.467000.000000.00000excludedK562HNRNPK
SEERVK3-1ENSG00000142396.6chr19+5882353158823828588174535881758258826113588270230.067000.000000.00053includedK562EIF3G
SEERVK3-1ENSG00000142396.6chr19+588235315882382858817400588175825882611358827023-0.066000.000390.08333excludedK562SERBP1
SEERVK3-1ENSG00000142396.6chr19+5882353158823828588174005881758258826113588270230.153000.000000.00000includedK562PTBP1
SEERVK3-1ENSG00000142396.6chr19+588235315882382858817400588175825882611358827023-0.059000.000020.01006excludedK562NPM1
SEERVK3-1ENSG00000142396.6chr19+5882353158823828588174005881758258826113588270230.059000.000010.00025includedK562HNRNPC
A3SSERVK3-1ENSG00000142396.6chr19+5882353158823828588235625882382858817453588175820.102000.000620.02755longerHepG2U2AF1
MXEERVK3-1ENSG00000142396.6chr19+58823393588235625882363158823769588174535881758258826113588270230.350000.006440.096941includedK562SUPV3L1
MXEERVK3-1ENSG00000142396.6chr19+58823386588235625882363158823828588174535881758258826113588270230.060000.002690.051571includedK562SUPV3L1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ERVK3-1 is not avaliable on ENCORE database.