EIF3J

General Information

Gene Name       : EIF3J
Gene ID             : ENSG00000104131.12
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: EIF3J)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878EIF3JENSG00000104131.12102.2385.5393.88ENCSR000AEF
HepG2EIF3JENSG00000104131.1276.67115.1195.89ENCSR985KAT
K562EIF3JENSG00000104131.12138.64144.44141.54ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
EIF3JA301-746A1BGHcLV41-31, Submitted, ENCORE2BGKcLV38-53, Submitted, ENCORE2


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
EIF3JK562CRISPREIF3J-BGKcLV38-53,EIF3J-BGKcLV38-54NT-BGKcLV38-1,NT-BGKcLV38-274.4,82.3SubmittingENCORE2
EIF3JHepG2CRISPREIF3J-BGHcLV41-31,EIF3J-BGHcLV41-32NT-BGHcLV41-1,NT-BGHcLV41-290.9,94.2SubmittingENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
EIF3JProduct_ID: A301-746A
Lot_ID: 1
Source: Bethyl Labs
Target Name: EIF3J-human		 EIF3J-HEPG2-CRISPR-A301-746A.png<br>Caption: Western blot following CRISPR against EIF3J in HepG2 whole cell lysate using EIF3J specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against EIF3J. EIF3J protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.
 EIF3J-K562-CRISPR-A301-746A.png<br>Caption: Western blot following CRISPR against EIF3J in K562 whole cell lysate using EIF3J specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against EIF3J. EIF3J protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.








RNA Targets

  • eCLIP assay for EIF3J is not avaliable on ENCORE database.



Proteins bound to RNA
  • EIF3J RNA is bound by 21 proteins.  







eCLIP assay for EIF3J is not avaliable on ENCORE database.





21 proteins are bound to EIF3J RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr154485421844854234+3'-UTR,intron-Distal3.679175.55970K562YBX3
chr154485493644854992+3'-UTR,intron-Distal4.542359.89562K562PUM2
chr154485345744853502+3'-UTR3.383546.96561K562IGF2BP1
chr154485395344854015+3'-UTR,intron-Proximal4.611656.23194K562IGF2BP1
chr154485337244853492+3'-UTR3.151923.77680K562TIA1
chr154482934544829436+5'-UTR,CDS,intron-Proximal4.306114.66602K562DDX3X
chr154482938544829437+5'-UTR,CDS,intron-Proximal3.685223.40453HepG2SRSF1
chr154484968644849759+CDS,intron-Distal,intron-Proximal5.2173310.27220K562GRWD1
chr154484371544843721+CDS,intron-Distal,intron-Proximal4.6150514.73538K562ZNF622
chr154484682944846874+CDS,intron-Proximal5.302234.35676HepG2PRPF8
chr154484675044846770+CDS,intron-Proximal3.6722317.44194K562ZNF800
chr154482954344829640+CDS,intron-Proximal3.463519.65010K562SRSF1
chr154484363144843721+CDS,intron-Distal,intron-Proximal3.136766.60200K562SRSF7
chr154484675044846770+CDS,intron-Proximal4.4704417.48803K562ZNF622
chr154484675044846766+CDS,intron-Proximal3.7530918.63676K562UCHL5
chr154485320844853247+CDS,intron-Proximal4.182493.93614HepG2AQR
chr154482953144829651+CDS,intron-Proximal4.4179710.12343HepG2SRSF1
chr154484674844846799+CDS,intron-Proximal4.564638.44720HepG2TRA2A
chr154482958744829616+CDS4.1436237.60286HepG2PRPF8
chr154484676644846840+CDS3.4123824.74485K562UCHL5
chr154484370444843721+CDS,intron-Distal,intron-Proximal3.3305419.72173K562ZNF800
chr154484679344846817+CDS4.304528.50824K562ZNF622
chr154482952044829633+CDS,intron-Proximal5.065269.09608HepG2GRWD1
chr154484968444849765+CDS,intron-Distal,intron-Proximal3.366229.60317K562PUM1
chr154484685144846860+CDS4.480333.71570HepG2BCLAF1
chr154485321544853270+CDS,intron-Proximal3.185897.87286K562ZNF622
chr154484365044843702+CDS,intron-Distal4.791374.83264K562TRA2A
chr154484675044846795+CDS,intron-Proximal4.978476.18872K562TRA2A
chr154485321544853307+CDS,intron-Proximal4.1029218.88686K562UCHL5
chr154484674944846797+CDS,intron-Proximal3.7209811.34372HepG2BCLAF1
chr154484363844843687+CDS,intron-Distal4.187845.06180HepG2BCLAF1
chr154484364544843724+CDS,intron-Distal,intron-Proximal4.442789.17537HepG2TRA2A
chr154484370244843721+CDS,intron-Distal,intron-Proximal5.059847.27847K562TRA2A
chr154485330044853339+CDS3.715666.39464HepG2BCLAF1
chr154484969044849766+CDS,intron-Distal4.6741516.00085HepG2BCLAF1
chr154482961644829670+CDS,intron-Proximal5.0327757.74167HepG2PRPF8
chr154484674844846822+CDS,intron-Proximal3.007447.50940K562CPSF6
chr154482952144829550+CDS,intron-Proximal3.714254.84938K562DDX3X
chr154484370144843721+CDS,intron-Distal,intron-Proximal4.291079.80976HepG2BCLAF1
chr154484674844846761+CDS,intron-Proximal3.230165.85962HepG2AQR
chr154485321544853239+CDS,intron-Proximal3.669116.39464HepG2BCLAF1
chr154485246544852519+CDS4.5994112.53492HepG2BCLAF1
chr154484677044846793+CDS4.7781017.78166K562ZNF622
chr154484363644843715+CDS,intron-Distal4.2283319.20990K562ZNF622
chr154484370344843720+CDS,intron-Distal3.2550611.96981K562UCHL5
chr154484968744849747+CDS,intron-Distal3.4488512.76586K562ZNF622
chr154484307344843104+CDS,intron-Distal,intron-Proximal3.135986.35635K562UCHL5
chr154484306444843129+CDS,intron-Distal,intron-Proximal4.925216.23935HepG2AQR
chr154484674944846769+CDS,intron-Proximal3.063865.76993K562GRWD1
chr154484364244843703+CDS,intron-Distal3.111269.36923K562UCHL5
chr154482956944829625+CDS3.4381512.50248K562UCHL5
chr154482976744829829+intron-Distal4.878835.51215K562RBM15
chr154484314844843196+intron-Distal,intron-Proximal4.035845.26367K562AQR
chr154484789144847999+intron-Distal3.801676.89837K562KHSRP
chr154483075144830812+intron-Distal3.692385.86177HepG2U2AF2
chr154483782244837869+intron-Distal3.131913.31830K562KHSRP
chr154484935144849470+intron-Distal3.723515.83959K562KHSRP
chr154483075444830812+intron-Distal4.085813.58873K562U2AF1
chr154483748744837584+intron-Distal4.076118.64567K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for EIF3J is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for EIF3J is not available on ENCORE database.

  • 107 RBPs can affect the levels of EIF3J.  








The Knockdown/knockout RNA-Seq assay for EIF3J is not available on ENCORE database.





107 RBPs can affect the gene expression of EIF3J :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
EIF3JENSG00000104131.81761.168301548.700800.185401.933801.40850HepG2ACO1
EIF3JENSG00000104131.82575.691901931.875500.414903.019002.46590HepG2AKAP1
EIF3JENSG00000104131.81317.961801555.97750-0.239502.165401.47640HepG2AKAP8L
EIF3JENSG00000104131.82310.056902646.40520-0.196102.336901.69660HepG2AUH
EIF3JENSG00000104131.82219.811201696.481800.387803.187802.36560HepG2CALR
EIF3JENSG00000104131.81289.903602538.37550-0.976603.146502.10250HepG2CCAR1
EIF3JENSG00000104131.8943.395901518.66950-0.686907.752206.50790HepG2CIRBP
EIF3JENSG00000104131.8993.502201503.65110-0.597903.593002.71570HepG2CNOT7
EIF3JENSG00000104131.81518.860601993.96070-0.392603.479502.71640HepG2CPSF6
EIF3JENSG00000104131.81787.850301427.374400.324803.766602.57390HepG2YBX3
EIF3JENSG00000104131.81799.829802206.50480-0.293905.227904.25470HepG2DAZAP1
EIF3JENSG00000104131.81395.852401121.319700.315802.560601.68440HepG2DDX24
EIF3JENSG00000104131.81191.202401850.65180-0.635606.726405.79220HepG2DDX3X
EIF3JENSG00000104131.8986.706601401.62730-0.506405.195604.26100HepG2DNAJC21
EIF3JENSG00000104131.8970.422401389.17400-0.5175010.475009.30450HepG2DNAJC2
EIF3JENSG00000104131.81527.996701055.242100.534003.834202.51830HepG2AGO1
EIF3JENSG00000104131.81011.374501528.26800-0.595605.759604.92230HepG2EIF2S1
EIF3JENSG00000104131.81795.043101423.489700.334503.514402.19790HepG2EIF2S2
EIF3JENSG00000104131.81415.597901082.289000.387203.750402.51740HepG2EIF3G
EIF3JENSG00000104131.81256.305901688.98500-0.427002.932702.27410HepG2EIF4A3
EIF3JENSG00000104131.83393.923002176.727400.6407018.0457016.29770HepG2EIF4G1
EIF3JENSG00000104131.81510.049302085.18800-0.465604.895603.83040HepG2EIF4G2
EIF3JENSG00000104131.82550.986903038.46990-0.252303.175902.53920HepG2ETF1
EIF3JENSG00000104131.81399.091601092.275400.357103.003901.81540HepG2FASTKD2
EIF3JENSG00000104131.8952.786301291.19650-0.438502.995901.93470HepG2GNB2L1
EIF3JENSG00000104131.81753.539202260.35250-0.366302.578901.95800HepG2GPKOW
EIF3JENSG00000104131.8899.672601415.05440-0.653408.585807.54050HepG2HNRNPA1
EIF3JENSG00000104131.8998.966701573.96110-0.655908.539507.37400HepG2HNRNPC
EIF3JENSG00000104131.81442.597302194.21580-0.605009.270808.05640HepG2HNRNPF
EIF3JENSG00000104131.81981.881801600.377700.308402.355001.70820HepG2HNRNPK
EIF3JENSG00000104131.8926.636002010.00110-1.1171050.5475048.13030HepG2HNRNPL
EIF3JENSG00000104131.81341.890302157.09210-0.684808.651107.60310HepG2HNRNPLL
EIF3JENSG00000104131.81746.091901307.358600.417404.923603.69470HepG2HNRNPM
EIF3JENSG00000104131.81121.466701563.55680-0.479408.322507.31100HepG2HNRNPU
EIF3JENSG00000104131.81327.184902160.70160-0.7031010.647709.31680HepG2IGF2BP1
EIF3JENSG00000104131.81197.804301533.68790-0.356602.470801.70450HepG2MSI2
EIF3JENSG00000104131.81540.494002199.86030-0.514003.230002.17870HepG2MTPAP
EIF3JENSG00000104131.81047.246401754.47720-0.744408.413407.33840HepG2NCBP2
EIF3JENSG00000104131.81805.553302187.95790-0.277102.989302.19730HepG2NOL12
EIF3JENSG00000104131.81495.257301912.64370-0.355202.997102.21910HepG2NSUN2
EIF3JENSG00000104131.81921.625101673.388100.199502.061501.52510HepG2PCBP1
EIF3JENSG00000104131.81107.332801394.57220-0.332703.415002.60350HepG2PPIL4
EIF3JENSG00000104131.8755.329101175.04040-0.637505.638204.52860HepG2PRPF8
EIF3JENSG00000104131.81529.496602088.55690-0.449405.311404.51880HepG2PUF60
EIF3JENSG00000104131.82595.509502217.048100.227302.247701.70150HepG2PUM1
EIF3JENSG00000104131.81273.885701577.45230-0.308404.196303.46480HepG2PUS1
EIF3JENSG00000104131.82876.320401336.557901.1056010.108408.82440HepG2RAVER1
EIF3JENSG00000104131.83201.976402539.589700.334304.783004.14850HepG2RBM22
EIF3JENSG00000104131.81979.819701525.306300.376203.173702.10720HepG2RBM27
EIF3JENSG00000104131.81810.333002363.32700-0.384603.421202.67390HepG2RPLP0
EIF3JENSG00000104131.81488.178301162.382700.356402.482001.73400HepG2RRP9
EIF3JENSG00000104131.82094.362601453.863600.526503.177301.54290HepG2RTF1
EIF3JENSG00000104131.82601.437701878.520500.469602.887502.19870HepG2SF3A3
EIF3JENSG00000104131.82384.229401772.753500.427407.875606.95920HepG2SF3B4
EIF3JENSG00000104131.81607.762002002.50350-0.316805.412804.48670HepG2SLBP
EIF3JENSG00000104131.82282.245302868.35740-0.329805.889905.23500HepG2SRFBP1
EIF3JENSG00000104131.81542.979802062.08910-0.418405.294004.46880HepG2SRSF5
EIF3JENSG00000104131.81577.851802155.65650-0.450205.881304.92860HepG2SRSF7
EIF3JENSG00000104131.81596.906602490.38590-0.6411018.0647016.99770HepG2SSB
EIF3JENSG00000104131.81836.773601249.018800.556303.198201.89950HepG2SUB1
EIF3JENSG00000104131.81418.922602102.38380-0.567206.817605.74690HepG2TARDBP
EIF3JENSG00000104131.8864.333601519.38280-0.8138015.9936014.96970HepG2TIAL1
EIF3JENSG00000104131.81248.734101532.86280-0.295802.362801.83320HepG2TRIM56
EIF3JENSG00000104131.82219.752001620.809600.453604.768103.95640HepG2U2AF1
EIF3JENSG00000104131.81409.464301665.96570-0.241202.679401.98990HepG2UPF1
EIF3JENSG00000104131.82235.322101469.765400.604804.455603.12510HepG2XRCC6
EIF3JENSG00000104131.81041.204101492.42350-0.519404.171503.28840HepG2XRN2
EIF3JENSG00000104131.81139.207301580.71530-0.472509.200608.09530HepG2ZC3H8
EIF3JENSG00000104131.81364.204001832.23600-0.425507.131306.35840HepG2ZNF622
EIF3JENSG00000104131.82036.984401335.161300.609304.803703.04810HepG2ZRANB2
EIF3JENSG00000104131.83536.220002688.766700.395204.534402.97990K562AARS
EIF3JENSG00000104131.84092.608704553.45710-0.153901.870401.38580K562AGGF1
EIF3JENSG00000104131.83803.154104738.01560-0.317103.184702.48300K562AKAP8L
EIF3JENSG00000104131.85021.388306651.78960-0.405705.067604.31620K562AQR
EIF3JENSG00000104131.82928.048703639.98890-0.314005.905604.48480K562BCLAF1
EIF3JENSG00000104131.83170.728104504.00730-0.506404.122503.05380K562BOP1
EIF3JENSG00000104131.8954.870101522.11950-0.672704.236302.87230K562CCAR1
EIF3JENSG00000104131.82815.621303836.50290-0.446305.201203.46220K562CIRBP
EIF3JENSG00000104131.84154.858506441.45340-0.632604.103602.76840K562CNOT7
EIF3JENSG00000104131.84553.531806258.58110-0.4588010.332108.20840K562CPEB4
EIF3JENSG00000104131.83030.993604789.12890-0.6600013.6524011.89080K562CPSF6
EIF3JENSG00000104131.82150.116002761.47420-0.361005.034503.54480K562CSTF2
EIF3JENSG00000104131.81702.404602505.90100-0.557808.497006.58410K562DDX3X
EIF3JENSG00000104131.810137.706106476.416500.6464024.8354023.07340K562DDX47
EIF3JENSG00000104131.82146.125502540.61070-0.243402.632101.36770K562DDX6
EIF3JENSG00000104131.82079.662302987.27450-0.522503.082102.11580K562EFTUD2
EIF3JENSG00000104131.82345.202402752.33800-0.230902.894301.65350K562EIF2S1
EIF3JENSG00000104131.84446.294305407.93690-0.282502.539801.84540K562EIF2S2
EIF3JENSG00000104131.82271.706901548.327900.553003.055001.99220K562EIF3A
EIF3JENSG00000104131.84442.893803204.073600.471503.335302.46630K562EIF3G
EIF3JENSG00000104131.82105.489602617.98160-0.314302.097701.37790K562EIF4A3
EIF3JENSG00000104131.81748.203202285.18910-0.386403.334501.88640K562EWSR1
EIF3JENSG00000104131.82431.098103112.50070-0.356504.071102.49680K562EXOSC5
EIF3JENSG00000104131.84454.066705355.92270-0.266002.262601.49570K562FIP1L1
EIF3JENSG00000104131.83092.539104872.67620-0.6559010.164508.47360K562FMR1
EIF3JENSG00000104131.83086.698004129.96800-0.420104.008202.89310K562FTO
EIF3JENSG00000104131.84177.978902722.579300.6177016.4808015.11200K562FXR1
EIF3JENSG00000104131.84542.199502922.003000.636305.884104.76630K562G3BP2
EIF3JENSG00000104131.83205.680704572.50090-0.512407.359406.06370K562GPKOW
EIF3JENSG00000104131.85690.934607207.25480-0.340802.786302.02840K562GRSF1
EIF3JENSG00000104131.82003.460702942.70890-0.554707.463606.52860K562HNRNPC
EIF3JENSG00000104131.82051.907202627.55280-0.356803.644402.31620K562HNRNPF
EIF3JENSG00000104131.84817.050103575.424300.429904.222302.65320K562HNRNPK
EIF3JENSG00000104131.83313.462405852.83090-0.8208019.4293016.60390K562HNRNPL
EIF3JENSG00000104131.85767.519604405.236500.388603.243102.22840K562HNRNPM
EIF3JENSG00000104131.82641.178403578.61950-0.438203.455802.26230K562IGF2BP2
EIF3JENSG00000104131.82860.161303640.35260-0.348003.468102.09480K562IGF2BP3
EIF3JENSG00000104131.83131.348404463.24520-0.511307.588006.10320K562METAP2
EIF3JENSG00000104131.83558.528304248.48960-0.255704.316003.32410K562MTPAP
EIF3JENSG00000104131.81979.651602614.30270-0.401205.308803.60960K562NCBP2
EIF3JENSG00000104131.83671.488604720.59070-0.3626012.4706011.04580K562NSUN2
EIF3JENSG00000104131.84572.969806188.33790-0.436402.469101.31880K562PABPC1
EIF3JENSG00000104131.81893.673102638.36610-0.478505.881504.48530K562PSIP1
EIF3JENSG00000104131.84301.744603654.949500.235002.168501.56900K562PTBP1
EIF3JENSG00000104131.88036.371109342.41080-0.217302.694201.74590K562PUM2
EIF3JENSG00000104131.84039.430904578.34940-0.180701.848701.34640K562RBM15
EIF3JENSG00000104131.81786.948402406.77860-0.429605.510104.10420K562RCC2
EIF3JENSG00000104131.84218.499102961.559800.510305.255604.12720K562RPS19
EIF3JENSG00000104131.84103.148805867.12320-0.515903.155701.51420K562SBDS
EIF3JENSG00000104131.83560.477803039.330900.228202.233101.46680K562SF3B4
EIF3JENSG00000104131.81716.361202281.60200-0.410704.141402.81340K562SRFBP1
EIF3JENSG00000104131.84290.595604772.01270-0.153402.222401.37470K562SRPK2
EIF3JENSG00000104131.82698.678403383.54770-0.326302.939301.85200K562SRSF5
EIF3JENSG00000104131.84104.647403045.943100.430306.586605.31110K562SYNCRIP
EIF3JENSG00000104131.82784.977503498.03680-0.328903.739302.76710K562TIA1
EIF3JENSG00000104131.81738.344802537.71410-0.545805.666804.28050K562TIAL1
EIF3JENSG00000104131.82764.534103432.03110-0.312002.864001.74790K562TRA2A
EIF3JENSG00000104131.81943.888002695.55930-0.471605.332003.91570K562TRIM56
EIF3JENSG00000104131.82428.325702925.98540-0.269002.717201.92040K562U2AF2
EIF3JENSG00000104131.83747.079205005.33160-0.4177010.909209.59940K562UPF1
EIF3JENSG00000104131.83264.633904282.92190-0.391705.060503.85920K562WDR3
EIF3JENSG00000104131.85634.441204453.620000.339208.193706.81120K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for EIF3J is not available on ENCORE database.






No RBPs affect the alternative splcing events of EIF3J on ENCORE database.





The Knockdown/knockout RNA-Seq assay for EIF3J is not avaliable on ENCORE database.