EEA1

General Information

Gene Name       : EEA1
Gene ID             : ENSG00000102189.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: EEA1)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878EEA1ENSG00000102189.1614.5013.6314.07ENCSR000AEF
HepG2EEA1ENSG00000102189.166.8412.899.87ENCSR985KAT
K562EEA1ENSG00000102189.165.858.447.14ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for EEA1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • EEA1 RNA is bound by 19 proteins.  







eCLIP assay for EEA1 is not avaliable on ENCORE database.





19 proteins are bound to EEA1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr129324595093245998-3'-UTR,CDS,intron-Distal,intron-Proximal5.406389.32793HepG2BCLAF1
chr129324769993247729-3'-UTR,CDS,intron-Distal3.117363.12941K562UCHL5
chr129324488593244960-3'-UTR,CDS,intron-Distal,intron-Proximal3.568364.49887K562ZNF622
chr129324600893246071-3'-UTR,CDS,intron-Distal4.859829.30195HepG2BCLAF1
chr129324668693246741-3'-UTR,CDS,intron-Distal,intron-Proximal5.7445210.71076HepG2BCLAF1
chr129324501193245043-3'-UTR,CDS,intron-Distal,intron-Proximal4.162603.29312HepG2FXR2
chr129324492093245034-3'-UTR,CDS,intron-Distal3.963306.40330K562UCHL5
chr129322644593226516-3'-UTR,CDS,intron-Distal4.081123.34184HepG2GRWD1
chr129323628693236356-3'-UTR,CDS,intron-Distal3.548043.61259K562ZNF622
chr129324599793246062-3'-UTR,CDS,intron-Distal4.358934.55369K562LIN28B
chr129321004193210103-3'-UTR,CDS,intron-Distal3.603134.20387K562ZNF622
chr129324495493245043-3'-UTR,CDS,intron-Distal,intron-Proximal4.4147813.37200HepG2BCLAF1
chr129325863793258694-3'-UTR,CDS,intron-Distal3.877083.79347HepG2GRWD1
chr129324488693244928-3'-UTR,CDS,intron-Distal,intron-Proximal5.366357.49561HepG2BCLAF1
chr129323627593236358-3'-UTR,CDS,intron-Distal,intron-Proximal4.2526610.89658HepG2BCLAF1
chr129322644093226516-3'-UTR,CDS,intron-Distal4.428105.01312K562UCHL5
chr129321001893210103-3'-UTR,CDS,intron-Distal4.450304.78571K562UCHL5
chr129321003893210133-3'-UTR,CDS,intron-Distal3.176666.33024HepG2BCLAF1
chr129321319193213252-3'-UTR,5'-UTR,CDS,intron-Distal4.533784.37348HepG2BCLAF1
chr129322631593226417-3'-UTR,CDS,intron-Distal4.012846.81238K562ZNF622
chr129316659993166666-3'-UTR,intron-Distal3.777173.60337HepG2FUBP3
chr129324488593244966-3'-UTR,CDS,intron-Distal,intron-Proximal3.687474.24070HepG2GRWD1
chr129324598893246058-3'-UTR,CDS,intron-Distal3.441843.60157HepG2GRWD1
chr129321003193210131-3'-UTR,CDS,intron-Distal3.658814.88141HepG2GRWD1
chr129324600193246061-3'-UTR,CDS,intron-Distal3.180203.54620HepG2LIN28B
chr129320997693210038-3'-UTR,CDS,intron-Distal4.149386.22576HepG2BCLAF1
chr129321002593210114-3'-UTR,CDS,intron-Distal3.238603.09866HepG2FXR2
chr129322631293226397-3'-UTR,CDS,intron-Distal3.264125.00751HepG2BCLAF1
chr129324496693245030-3'-UTR,CDS,intron-Distal4.461094.69071HepG2GRWD1
chr129325104993251107-3'-UTR,CDS,intron-Distal,intron-Proximal3.787867.23562HepG2BCLAF1
chr129320684293206861-3'-UTR,CDS,intron-Distal4.261623.02457HepG2BCLAF1
chr129324771193247730-3'-UTR,CDS,intron-Distal3.169114.26492HepG2BCLAF1
chr129332291993323027-5'-UTR,intron-Distal3.479505.84843HepG2DDX3X
chr129319537993195438-CDS,intron-Distal3.241323.12941K562UCHL5
chr129317132893171360-CDS,intron-Distal3.291073.27569HepG2BCLAF1
chr129319623993196391-CDS,intron-Distal,intron-Proximal6.3018118.62730HepG2BCLAF1
chr129319269693192796-CDS,intron-Distal6.0324913.92749HepG2BCLAF1
chr129319270793192787-CDS,intron-Distal3.331783.73423K562UCHL5
chr129318164593181708-CDS,intron-Distal3.200224.79538HepG2BCLAF1
chr129317405593174136-CDS,intron-Distal,intron-Proximal4.084629.37631HepG2BCLAF1
chr129316980393169861-CDS,intron-Distal3.857873.11168K562ZNF622
chr129319537593195418-CDS,intron-Distal,intron-Proximal3.857873.11168K562ZNF622
chr129317288993172917-CDS,intron-Distal,intron-Proximal4.955875.23259HepG2BCLAF1
chr129328544293285498-CDS,intron-Distal,intron-Proximal4.187847.16838HepG2BCLAF1
chr129318164393181746-CDS,intron-Distal3.570804.06757K562UCHL5
chr129318160193181674-CDS,intron-Distal,intron-Proximal3.603883.71591HepG2PRPF8
chr129317172293171757-CDS,intron-Distal3.461593.27569HepG2BCLAF1
chr129319268993192815-CDS,intron-Distal4.584543.71264HepG2FXR2
chr129319273193192843-CDS,intron-Distal4.314704.69071HepG2GRWD1
chr129317186893171955-CDS,intron-Distal4.8041810.19430HepG2BCLAF1
chr129328542493285460-CDS,intron-Distal3.341534.24070HepG2GRWD1
chr129327513493275214-intron-Distal4.351468.29206HepG2PCBP2
chr129327513693275230-intron-Distal3.413826.71492K562PTBP1
chr129328020193280277-intron-Distal5.8561510.11308HepG2PCBP2
chr129327513393275223-intron-Distal3.732183.10961HepG2MATR3
chr129325092693250977-intron-Distal,intron-Proximal5.137117.71913HepG2U2AF2
chr129318679393186939-intron-Distal3.290863.84025HepG2SUGP2
chr129328400493284094-intron-Distal4.472104.74221HepG2PTBP1
chr129325680193256844-intron-Distal3.242794.08528HepG2SUGP2
chr129318427093184367-intron-Distal4.243954.61447HepG2SUGP2
chr129328019493280290-intron-Distal4.805994.35687HepG2DDX59
chr129328518693285377-intron-Distal,intron-Proximal4.459325.68841K562KHSRP
chr129328514593285350-intron-Distal,intron-Proximal3.371054.89227HepG2KHSRP
chr129328108693281108-intron-Distal3.889795.47443HepG2PCBP2
chr129325590193255967-intron-Distal4.761066.05753HepG2SUGP2
chr129327328393273395-intron-Distal4.946446.57498HepG2PCBP2
chr129318136493181433-intron-Distal4.185104.31512K562KHSRP
chr129325726893257364-intron-Distal4.4327610.61114HepG2SUGP2
chr129325628493256359-intron-Distal3.715578.58268HepG2SUGP2
chr129328010293280192-intron-Distal6.0392112.30102HepG2PCBP2
chr129327514893275233-intron-Distal4.455387.88692HepG2PTBP1
chr129327531193275430-intron-Distal5.406009.03229HepG2QKI
chr129328106193281086-intron-Distal3.951665.47443HepG2PCBP2
chr129325851793258620-intron-Distal,intron-Proximal3.996863.89294K562KHSRP
chr129328105493281106-intron-Distal4.209293.81649K562ILF3
chr129317622893176309-intron-Distal4.046344.54401K562KHSRP
chr129325695393257026-intron-Distal5.216908.56566HepG2SUGP2
chr129325675193256776-intron-Distal3.920213.79098HepG2SUGP2
chr129320967493209775-intron-Distal4.096075.07626HepG2PTBP1
chr129324787793247948-intron-Distal5.218807.62903HepG2QKI
chr129320966893209768-intron-Distal4.027105.03657K562PTBP1
chr129326711593267188-intron-Distal4.272563.74583HepG2PTBP1
chr129328021593280289-intron-Distal4.642076.32074HepG2HNRNPK
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for EEA1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for EEA1 is not available on ENCORE database.

  • 99 RBPs can affect the levels of EEA1.  








The Knockdown/knockout RNA-Seq assay for EEA1 is not available on ENCORE database.





99 RBPs can affect the gene expression of EEA1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
EEA1ENSG00000102189.121769.819901200.735500.559607.540206.63660HepG2ACO1
EEA1ENSG00000102189.121632.328101981.86630-0.279902.701402.02270HepG2AUH
EEA1ENSG00000102189.12485.221701132.66230-1.2230015.6678013.28850HepG2BCCIP
EEA1ENSG00000102189.121710.383903144.85970-0.878709.259008.24560HepG2BOP1
EEA1ENSG00000102189.121893.649702692.25910-0.507602.492501.57410HepG2CCAR1
EEA1ENSG00000102189.12590.91400921.05270-0.640303.636602.75420HepG2CNOT7
EEA1ENSG00000102189.122052.666202887.23740-0.492202.717002.03590HepG2CPSF6
EEA1ENSG00000102189.12988.324601492.80860-0.595002.529801.47170HepG2CPSF7
EEA1ENSG00000102189.12762.772701075.40520-0.495602.684001.68260HepG2YBX3
EEA1ENSG00000102189.121040.05180699.709300.571705.872004.39720HepG2CSTF2
EEA1ENSG00000102189.12926.732701366.75320-0.5605010.633409.32780HepG2DAZAP1
EEA1ENSG00000102189.121353.375901110.570500.285203.633402.69520HepG2DDX19B
EEA1ENSG00000102189.12772.161801076.89290-0.479905.752704.14000HepG2DDX1
EEA1ENSG00000102189.121169.44660923.435900.340602.712301.80910HepG2DDX24
EEA1ENSG00000102189.12361.077301272.78580-1.8176037.0875035.07940HepG2DDX3X
EEA1ENSG00000102189.12708.792401093.19900-0.625104.986004.17900HepG2DDX6
EEA1ENSG00000102189.12595.370701018.46840-0.7745010.052608.32000HepG2DHX30
EEA1ENSG00000102189.12569.933401055.94930-0.8897017.3177015.70540HepG2DNAJC21
EEA1ENSG00000102189.12402.432901046.65110-1.3790046.3102043.92060HepG2DNAJC2
EEA1ENSG00000102189.12583.75530893.92430-0.614807.385905.45800HepG2FAM120A
EEA1ENSG00000102189.122926.055201829.537900.677404.307703.36490HepG2FIP1L1
EEA1ENSG00000102189.121073.401602892.00970-1.429908.609206.83900HepG2FTO
EEA1ENSG00000102189.12861.72520534.574600.688707.769106.48910HepG2FUBP3
EEA1ENSG00000102189.121487.535801153.992200.366202.658601.78720HepG2G3BP2
EEA1ENSG00000102189.121985.753003273.14100-0.721006.144505.21600HepG2GPKOW
EEA1ENSG00000102189.12889.845501146.44070-0.365503.918602.77090HepG2HDGF
EEA1ENSG00000102189.12513.12980778.30410-0.601003.757702.14460HepG2HNRNPA0
EEA1ENSG00000102189.12595.494801185.80990-0.9937015.6128014.09710HepG2HNRNPC
EEA1ENSG00000102189.121376.184401863.65930-0.437505.964704.96440HepG2HNRNPF
EEA1ENSG00000102189.12847.675901245.04910-0.5546011.019409.75180HepG2HNRNPL
EEA1ENSG00000102189.122330.337703123.59770-0.422702.955302.30810HepG2HNRNPLL
EEA1ENSG00000102189.12722.465801177.96940-0.7053014.2360012.95040HepG2HNRNPU
EEA1ENSG00000102189.121365.208401835.19310-0.426804.050403.18790HepG2IGF2BP1
EEA1ENSG00000102189.12871.780201203.25520-0.464908.205707.00970HepG2ILF2
EEA1ENSG00000102189.12597.79480897.82830-0.586802.953601.57810HepG2ILF3
EEA1ENSG00000102189.12857.079601097.70700-0.357004.744203.41670HepG2KIF1C
EEA1ENSG00000102189.12723.374301071.06880-0.566203.403202.05260HepG2LIN28B
EEA1ENSG00000102189.12723.790101046.85320-0.532402.831101.76510HepG2METAP2
EEA1ENSG00000102189.122008.484703185.15550-0.665303.511102.41050HepG2MTPAP
EEA1ENSG00000102189.12725.536701206.61440-0.733807.433006.41970HepG2NCBP2
EEA1ENSG00000102189.12953.236701355.26230-0.507707.038205.83170HepG2NOL12
EEA1ENSG00000102189.12664.143601022.45800-0.622502.863201.74930HepG2NONO
EEA1ENSG00000102189.122166.230402769.49800-0.354402.321601.63400HepG2NSUN2
EEA1ENSG00000102189.12473.84910747.77870-0.658203.306201.55770HepG2PA2G4
EEA1ENSG00000102189.12935.166701165.97710-0.318203.408002.47710HepG2PARN
EEA1ENSG00000102189.121252.85520998.489300.327303.761703.07690HepG2PCBP1
EEA1ENSG00000102189.12815.177501050.65300-0.366103.742002.89690HepG2PPIL4
EEA1ENSG00000102189.121112.12820859.207600.372102.635501.84620HepG2PRPF8
EEA1ENSG00000102189.121637.633801016.011000.6886015.4351014.34340HepG2PTBP1
EEA1ENSG00000102189.121073.662501293.67850-0.268902.004601.48620HepG2PUF60
EEA1ENSG00000102189.122004.156801373.252300.5453013.9548012.83690HepG2PUM1
EEA1ENSG00000102189.123790.598101211.528001.6455014.6623013.15950HepG2RAVER1
EEA1ENSG00000102189.121789.06000998.639800.8411015.6365014.10250HepG2RBM25
EEA1ENSG00000102189.121729.878701130.713700.6133012.3516011.36340HepG2NELFE
EEA1ENSG00000102189.121447.704101053.122400.459006.684205.78600HepG2RECQL
EEA1ENSG00000102189.121391.573401134.054700.295102.338901.59890HepG2RPS2
EEA1ENSG00000102189.121208.01250849.948200.507103.982503.06080HepG2RRP9
EEA1ENSG00000102189.121894.319901317.681700.523603.100201.48540HepG2RTF1
EEA1ENSG00000102189.12730.578801049.02870-0.521908.188507.16770HepG2SAFB2
EEA1ENSG00000102189.121658.259201057.779200.6485013.5649012.41040HepG2SF3B4
EEA1ENSG00000102189.121582.764201223.336000.371506.379905.46710HepG2SMN1
EEA1ENSG00000102189.121522.179203440.20930-1.1764013.7146011.99830HepG2SNRNP70
EEA1ENSG00000102189.122380.515201104.100401.1083044.7658043.36780HepG2SRSF1
EEA1ENSG00000102189.121379.666201830.91220-0.408203.773902.97980HepG2SRSF7
EEA1ENSG00000102189.121151.42370898.251300.358104.446103.77760HepG2SRSF9
EEA1ENSG00000102189.121932.520701452.648700.411707.363906.43090HepG2SUCLG1
EEA1ENSG00000102189.121177.57550992.430400.246702.026501.53380HepG2TAF15
EEA1ENSG00000102189.122245.472703043.92430-0.438903.575602.76430HepG2TARDBP
EEA1ENSG00000102189.12720.409901154.85150-0.6808013.4203012.31260HepG2TRIM56
EEA1ENSG00000102189.123009.239701565.488900.942704.874904.05390HepG2U2AF1
EEA1ENSG00000102189.12483.95680654.92970-0.436502.586601.85380HepG2UCHL5
EEA1ENSG00000102189.121116.846601617.49230-0.5343010.670809.46150HepG2UPF1
EEA1ENSG00000102189.12476.987101015.27390-1.089809.638507.70770HepG2UPF2
EEA1ENSG00000102189.12525.95090827.91890-0.654604.552103.13140HepG2XPO5
EEA1ENSG00000102189.121774.478701191.076300.575003.940502.42530HepG2XRCC5
EEA1ENSG00000102189.122169.377801332.202900.703405.769504.27350HepG2XRCC6
EEA1ENSG00000102189.12587.325401091.32260-0.8938010.096008.73120HepG2XRN2
EEA1ENSG00000102189.121842.207001464.879200.330605.331504.44930HepG2ZC3H8
EEA1ENSG00000102189.12831.40080575.545700.530503.396802.07220K562AARS
EEA1ENSG00000102189.12955.067701352.13740-0.501605.172404.26670K562AKAP8L
EEA1ENSG00000102189.121097.272201682.73060-0.616903.674602.41900K562CNOT7
EEA1ENSG00000102189.121259.696401516.17750-0.267402.522701.46850K562CPEB4
EEA1ENSG00000102189.12643.69010817.23590-0.344402.455301.31860K562DDX21
EEA1ENSG00000102189.12475.17640697.47210-0.553705.086703.61460K562DDX3X
EEA1ENSG00000102189.121911.015801568.875000.284503.505402.78400K562DDX47
EEA1ENSG00000102189.12520.88740707.15860-0.441104.000902.34020K562DDX6
EEA1ENSG00000102189.12556.93550766.17360-0.460204.663303.06910K562EIF2S1
EEA1ENSG00000102189.12496.67860326.998900.602902.721501.72630K562EIF3A
EEA1ENSG00000102189.12700.500301193.97570-0.7693010.219508.47230K562FIP1L1
EEA1ENSG00000102189.12574.84820975.81800-0.763408.033206.38620K562FTO
EEA1ENSG00000102189.12606.35240757.83040-0.321702.098101.55780K562FXR1
EEA1ENSG00000102189.121206.99380752.544400.681502.831902.11410K562G3BP2
EEA1ENSG00000102189.12878.319501080.28630-0.298602.037601.35270K562GPKOW
EEA1ENSG00000102189.12842.023701183.79590-0.491504.591803.61930K562GRSF1
EEA1ENSG00000102189.12529.34350692.85780-0.388402.898201.79880K562HNRNPA1
EEA1ENSG00000102189.12300.20730630.10030-1.069607.622706.67870K562HNRNPC
EEA1ENSG00000102189.121043.510201417.83520-0.442204.616903.21730K562HNRNPL
EEA1ENSG00000102189.12582.06940767.26730-0.398503.495902.49330K562HNRNPU
EEA1ENSG00000102189.12675.437201009.93620-0.580402.654201.75190K562MATR3
EEA1ENSG00000102189.12533.322201054.48260-0.9835015.4865013.32070K562METAP2
EEA1ENSG00000102189.12338.06360569.12520-0.751502.558501.32970K562NONO
EEA1ENSG00000102189.12890.981501085.97840-0.285503.345802.53160K562NSUN2
EEA1ENSG00000102189.12713.683301355.35630-0.9253014.3509012.02080K562PPIG
EEA1ENSG00000102189.122599.128301750.261700.5704010.712508.54240K562PUM1
EEA1ENSG00000102189.121054.222701341.00790-0.347102.516701.99300K562PUS1
EEA1ENSG00000102189.121080.78360718.032200.589903.071301.56700K562RAVER1
EEA1ENSG00000102189.12987.053401306.56160-0.404604.529003.78880K562RBM15
EEA1ENSG00000102189.12852.769101122.45720-0.396403.379401.59930K562RBM17
EEA1ENSG00000102189.12656.05230943.02960-0.523502.131401.39740K562RBM22
EEA1ENSG00000102189.122396.247501223.933300.969204.090502.12090K562RBM39
EEA1ENSG00000102189.12502.47970764.18930-0.604905.611703.08120K562RECQL
EEA1ENSG00000102189.12601.98850796.80340-0.404502.991401.88670K562SRSF4
EEA1ENSG00000102189.12636.78690975.43470-0.615202.226301.58720K562TARDBP
EEA1ENSG00000102189.12611.40780922.84640-0.594002.624501.56500K562TRA2A
EEA1ENSG00000102189.121187.13570729.531500.702306.842504.96740K562U2AF1
EEA1ENSG00000102189.121185.68730753.423900.654109.200007.72760K562U2AF2
EEA1ENSG00000102189.121265.068601024.558100.304103.676802.71120K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for EEA1 is not available on ENCORE database.





3 RBPs can affect the splicing of EEA1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEEEA1ENSG00000102189.12chr12-9319465693194697931926679319286293195375931954770.073000.000000.00136includedK562FMR1
SEEEA1ENSG00000102189.12chr12-9319465693194697931926679319286293195375931954770.088000.010270.08294includedK562AQR
A3SSEEA1ENSG00000102189.12chr12-9320997593210193932099759321017693213083932133070.134000.004060.02408longerK562AQR
A3SSEEA1ENSG00000102189.12chr12-9324488693245083932448869324504293245950932460720.228000.000840.00596longerK562AQR
A3SSEEA1ENSG00000102189.12chr12-9317131893171558931713189317143993171716931719550.095000.000430.00329longerK562AQR
A3SSEEA1ENSG00000102189.12chr12-9319537593195494931953759319547793196179931965100.167000.003060.01878longerK562AQR
MXEEEA1ENSG00000102189.12chr12-9324769093247730932510509325111693246687932468019325120693251261-0.242000.000010.000172includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for EEA1 is not avaliable on ENCORE database.