CMPK1

General Information

Gene Name       : CMPK1
Gene ID             : ENSG00000162368.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CMPK1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CMPK1ENSG00000162368.13101.7085.4193.56ENCSR000AEF
HepG2CMPK1ENSG00000162368.1343.3083.7663.53ENCSR985KAT
K562CMPK1ENSG00000162368.13122.42120.66121.54ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CMPK1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CMPK1 RNA is bound by 29 proteins.  







eCLIP assay for CMPK1 is not avaliable on ENCORE database.





29 proteins are bound to CMPK1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr14784274647842801+3'-UTR3.2459314.19655K562FAM120A
chr14784387747843906+3'-UTR3.394835.49224K562DDX55
chr14784292647842989+3'-UTR4.4003916.47782K562FAM120A
chr14784386547843877+3'-UTR3.229143.84285K562DDX55
chr14784394447844017+3'-UTR5.28200400.00000K562PABPC4
chr14784250647842556+3'-UTR4.4812711.75175K562IGF2BP1
chr14784315347843224+3'-UTR3.1534428.01218K562FAM120A
chr14784386947844007+3'-UTR3.3424218.45760K562DDX6
chr14784281347842899+3'-UTR3.3192933.14959K562FAM120A
chr14784388247843992+3'-UTR3.3864819.71081K562ZC3H11A
chr14784385647843918+3'-UTR5.109587.17420HepG2DDX55
chr14784301347843100+3'-UTR3.928103.41108HepG2FUS
chr14784386747843950+3'-UTR3.952959.25045K562APOBEC3C
chr14784390747843930+3'-UTR5.91950400.00000K562PABPC4
chr14784393047843944+3'-UTR6.10087400.00000K562PABPC4
chr14784093147840967+3'-UTR,CDS,intron-Proximal3.630113.57857HepG2BCLAF1
chr14784393547843962+3'-UTR3.3718610.82880K562DDX55
chr14784346647843561+3'-UTR3.7463132.79550K562FAM120A
chr14784268447842722+3'-UTR3.3164515.16474K562FAM120A
chr14784391847844002+3'-UTR3.9375110.63907HepG2DDX55
chr14784257747842666+3'-UTR3.358859.47165K562IGF2BP1
chr14784302147843088+3'-UTR3.6538617.06700K562IGF2BP2
chr14784393047844006+3'-UTR3.1542620.98334K562FAM120A
chr14784276147842815+3'-UTR3.093046.06713K562TIA1
chr14784414047844251+3'-UTR3.546824.36839K562NOLC1
chr14784298947843095+3'-UTR3.2590339.49853K562FAM120A
chr14784387047843907+3'-UTR4.0767810.27023K562PABPC4
chr14784390647843935+3'-UTR3.4177512.06710K562DDX55
chr14784323747843268+3'-UTR3.701413.02060K562LIN28B
chr14784302347843073+3'-UTR3.185983.79156K562LIN28B
chr14779953747799584+5'-UTR3.3716814.95327HepG2DDX3X
chr14779958447799618+5'-UTR4.2662310.68796HepG2DDX3X
chr14779958347799659+5'-UTR,CDS4.3275014.76558K562DDX3X
chr14779949947799519+5'-UTR4.851197.80041HepG2DDX3X
chr14779975947799771+CDS3.1647113.36483K562YBX3
chr14784058247840658+CDS,intron-Distal,intron-Proximal3.2205511.44981K562LIN28B
chr14783414747834202+CDS,intron-Distal3.941833.15006K562RBM15
chr14783870347838778+CDS3.044104.45146K562PUM1
chr14783414047834224+CDS,intron-Distal,intron-Proximal3.216275.60102K562GRWD1
chr14779961847799661+CDS3.898749.13812HepG2DDX3X
chr14784087147840901+CDS3.625315.32768K562YBX3
chr14783414047834187+CDS,intron-Distal,intron-Proximal3.351243.95463K562ZNF800
chr14779966147799719+CDS3.614828.13782HepG2DDX3X
chr14779980647799907+intron-Distal,intron-Proximal3.320826.40410HepG2RBM22
chr14780305047803129+intron-Distal3.765546.83037K562KHSRP
chr14783719747837300+intron-Distal4.878485.26569K562MATR3
chr14781248547812579+intron-Distal3.766673.84723K562ILF3
chr14781281347812943+intron-Distal3.157903.05068HepG2U2AF2
chr14781282947812920+intron-Distal4.9832915.99351HepG2PTBP1
chr14783720847837249+intron-Distal5.063606.57566K562PTBP1
chr14783703747837117+intron-Distal4.967289.08502K562PTBP1
chr14781248047812580+intron-Distal7.8456453.42940HepG2PCBP2
chr14780004547800117+intron-Distal3.424623.87101HepG2NKRF
chr14781284447812910+intron-Distal3.871619.96429K562PTBP1
chr14780571547805761+intron-Distal4.794845.77028HepG2PCBP2
chr14780930847809372+intron-Distal3.572793.24593HepG2XPO5
chr14783724947837288+intron-Distal3.563604.75362K562PTBP1
chr14781218747812234+intron-Distal4.221189.23478K562PTBP1
chr14780312947803211+intron-Distal3.424994.10408K562KHSRP
chr14784042347840510+intron-Distal,intron-Proximal3.971553.66668K562KHSRP
chr14781888447818957+intron-Distal3.609103.02234K562KHSRP
chr14781248647812567+intron-Distal3.893326.58297HepG2HNRNPK
chr14783957447839697+intron-Distal4.153313.82619K562ILF3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CMPK1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CMPK1 is not available on ENCORE database.

  • 90 RBPs can affect the levels of CMPK1.  








The Knockdown/knockout RNA-Seq assay for CMPK1 is not available on ENCORE database.





90 RBPs can affect the gene expression of CMPK1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CMPK1ENSG00000162368.93385.464805364.57540-0.664107.406006.58090HepG2AKAP1
CMPK1ENSG00000162368.93220.018404438.76390-0.463104.630503.62720HepG2ASCC1
CMPK1ENSG00000162368.94116.719903402.883200.274602.934601.49020HepG2ATP5C1
CMPK1ENSG00000162368.95047.953803337.909700.596705.183404.16800HepG2CALR
CMPK1ENSG00000162368.95113.656204217.122200.278002.127101.44350HepG2CIRBP
CMPK1ENSG00000162368.92196.415302827.34580-0.364308.120707.09820HepG2CKAP4
CMPK1ENSG00000162368.94053.293602944.700000.460905.221504.30440HepG2CPSF6
CMPK1ENSG00000162368.9786.607901829.22470-1.217506.028104.53710HepG2CSTF2
CMPK1ENSG00000162368.94386.455803810.716300.202902.270301.67830HepG2CELF1
CMPK1ENSG00000162368.92236.814802615.39260-0.225603.313302.40910HepG2DDX19B
CMPK1ENSG00000162368.92767.833202192.620700.336003.099702.38500HepG2DDX21
CMPK1ENSG00000162368.92269.511203343.91020-0.559203.028402.00660HepG2DDX59
CMPK1ENSG00000162368.93521.015704414.29460-0.326202.211001.65300HepG2DDX6
CMPK1ENSG00000162368.92045.308002708.02720-0.404906.294805.26830HepG2DNAJC21
CMPK1ENSG00000162368.92087.912802683.81320-0.362205.926905.02580HepG2DNAJC2
CMPK1ENSG00000162368.92845.729602018.557400.495402.694901.60410HepG2AGO1
CMPK1ENSG00000162368.93121.502104243.70950-0.443104.218803.49460HepG2EIF2S1
CMPK1ENSG00000162368.92667.539402139.870100.317902.476101.61610HepG2EIF3D
CMPK1ENSG00000162368.91202.857104566.11260-1.9245040.3709037.96860HepG2EIF4B
CMPK1ENSG00000162368.95454.581904902.638500.153801.931701.40980HepG2ETF1
CMPK1ENSG00000162368.92021.695102531.56560-0.324503.028502.20920HepG2FUBP3
CMPK1ENSG00000162368.92953.175904731.67190-0.680109.355408.15240HepG2FXR1
CMPK1ENSG00000162368.92553.662404389.42810-0.7815010.607909.34620HepG2G3BP1
CMPK1ENSG00000162368.93582.316204659.79870-0.379403.418102.42140HepG2G3BP2
CMPK1ENSG00000162368.91364.375701905.27680-0.481804.421703.27920HepG2GEMIN5
CMPK1ENSG00000162368.93172.301802699.843500.232603.177202.13370HepG2HDGF
CMPK1ENSG00000162368.94186.690602875.961700.541702.990301.55040HepG2HLTF
CMPK1ENSG00000162368.91413.764602733.96750-0.9515015.7935014.45620HepG2HNRNPA1
CMPK1ENSG00000162368.94524.584103765.828100.264703.873102.79590HepG2HNRNPA2B1
CMPK1ENSG00000162368.92335.316103040.93340-0.380904.035103.20900HepG2HNRNPC
CMPK1ENSG00000162368.92369.206203128.86110-0.401202.596001.90070HepG2HNRNPF
CMPK1ENSG00000162368.93010.694403732.88280-0.310207.520006.45710HepG2HNRNPL
CMPK1ENSG00000162368.93097.997002626.723900.238002.343901.46710HepG2HNRNPM
CMPK1ENSG00000162368.92305.191503020.83600-0.390106.179705.30440HepG2HNRNPU
CMPK1ENSG00000162368.92371.614203081.07880-0.377602.739502.01940HepG2IGF2BP1
CMPK1ENSG00000162368.92152.680102978.81530-0.468603.302101.97320HepG2KHDRBS1
CMPK1ENSG00000162368.93666.126004733.32290-0.368603.062702.37270HepG2MAGOH
CMPK1ENSG00000162368.93598.479004759.84830-0.403503.218602.54250HepG2MATR3
CMPK1ENSG00000162368.92939.138704871.99670-0.729109.709708.56500HepG2NCBP2
CMPK1ENSG00000162368.93562.558304338.95610-0.284401.958201.34210HepG2PABPC4
CMPK1ENSG00000162368.93281.804804020.13980-0.292805.005404.22640HepG2PCBP1
CMPK1ENSG00000162368.93012.108904090.63820-0.441609.996209.08290HepG2PTBP1
CMPK1ENSG00000162368.93090.037204114.39060-0.413106.525705.51110HepG2PUM2
CMPK1ENSG00000162368.92259.795602880.33810-0.350006.832005.93860HepG2PUS1
CMPK1ENSG00000162368.94291.333202742.225000.646004.092103.24320HepG2RAVER1
CMPK1ENSG00000162368.96048.057204097.742900.5615014.5920013.59190HepG2RBM22
CMPK1ENSG00000162368.95397.082904020.752600.424603.607402.84440HepG2RBM25
CMPK1ENSG00000162368.92756.585504552.49120-0.7238025.8433024.52750HepG2NELFE
CMPK1ENSG00000162368.92936.801504240.02020-0.5298014.8808013.62800HepG2RECQL
CMPK1ENSG00000162368.92539.455303369.89440-0.408203.332302.59340HepG2RPLP0
CMPK1ENSG00000162368.91626.457102082.19960-0.356403.609302.91660HepG2RPS19
CMPK1ENSG00000162368.91833.077302924.82270-0.674103.442102.24140HepG2RPS5
CMPK1ENSG00000162368.91935.337602690.24690-0.475205.314804.47470HepG2SAFB2
CMPK1ENSG00000162368.91461.102402089.79300-0.516305.300804.01000HepG2SERBP1
CMPK1ENSG00000162368.91587.870403153.22990-0.9897020.7125018.97760HepG2SF3B1
CMPK1ENSG00000162368.92552.217403137.38190-0.297803.254902.56650HepG2SMN1
CMPK1ENSG00000162368.93094.121403616.53120-0.225103.385902.78810HepG2SRSF9
CMPK1ENSG00000162368.93413.662904018.62170-0.235402.428901.94240HepG2SSB
CMPK1ENSG00000162368.93828.527402562.622900.579104.293702.78560HepG2SUB1
CMPK1ENSG00000162368.93720.083804355.36160-0.227504.216103.47780HepG2SUCLG1
CMPK1ENSG00000162368.94944.911703995.650500.307404.580303.88710HepG2TAF15
CMPK1ENSG00000162368.92279.644802935.68160-0.364904.709904.09270HepG2TIAL1
CMPK1ENSG00000162368.94481.958003256.500300.460705.240804.39150HepG2U2AF1
CMPK1ENSG00000162368.94131.015803015.536800.454002.882101.80230HepG2XRCC6
CMPK1ENSG00000162368.91559.134702852.32570-0.871403.435202.63200HepG2XRN2
CMPK1ENSG00000162368.92100.721201847.703000.185102.254901.64020HepG2ZC3H8
CMPK1ENSG00000162368.92236.135203382.79830-0.5972022.9355021.74040HepG2ZNF622
CMPK1ENSG00000162368.97896.259006539.607300.271905.362304.61410K562AGGF1
CMPK1ENSG00000162368.94001.222704916.66130-0.297204.470002.51080K562AKAP1
CMPK1ENSG00000162368.99338.999907186.052700.378004.268302.99200K562AKAP8
CMPK1ENSG00000162368.98994.786506804.761000.402405.091804.19440K562AKAP8L
CMPK1ENSG00000162368.98671.584307139.838300.280304.179003.03530K562ATP5C1
CMPK1ENSG00000162368.99355.247707815.179200.259403.134401.86750K562CCDC124
CMPK1ENSG00000162368.96934.604508010.97850-0.208202.597201.52600K562CPEB4
CMPK1ENSG00000162368.92142.018403626.09130-0.7594020.6429017.55690K562CSTF2
CMPK1ENSG00000162368.916001.5170011772.656600.442708.388106.72820K562CELF1
CMPK1ENSG00000162368.94009.333705278.57700-0.396807.746004.87380K562DDX24
CMPK1ENSG00000162368.93938.503705204.68940-0.402204.706203.63630K562EIF4A3
CMPK1ENSG00000162368.91988.598304687.07290-1.2369039.7938036.03570K562EIF4B
CMPK1ENSG00000162368.93780.680204910.11420-0.377105.688102.93040K562FUBP3
CMPK1ENSG00000162368.94871.847304070.906000.259002.605701.30400K562FUS
CMPK1ENSG00000162368.94644.244305412.65220-0.220902.829902.21910K562FXR1
CMPK1ENSG00000162368.98553.107005446.271300.651102.799302.08620K562G3BP2
CMPK1ENSG00000162368.94249.226505333.78180-0.328003.325702.14750K562HNRNPA1
CMPK1ENSG00000162368.93232.718704723.37510-0.547105.315804.51380K562HNRNPC
CMPK1ENSG00000162368.96279.465407490.84470-0.254502.469201.47690K562HNRNPL
CMPK1ENSG00000162368.96526.107805129.006700.347402.135101.32410K562HNRNPM
CMPK1ENSG00000162368.94455.383205906.35850-0.406705.407004.14570K562HNRNPU
CMPK1ENSG00000162368.99716.424507221.541100.428005.903104.59290K562KIF1C
CMPK1ENSG00000162368.98207.841606912.800800.247602.262001.32190K562MAK16
CMPK1ENSG00000162368.95089.187805768.79020-0.180802.714301.91290K562MTPAP
CMPK1ENSG00000162368.97253.273505670.471200.355102.039801.30460K562NAA15
CMPK1ENSG00000162368.94137.428506705.12950-0.696503.641502.46160K562PABPN1
CMPK1ENSG00000162368.92836.475704234.79830-0.578203.672602.61220K562PSIP1
CMPK1ENSG00000162368.913956.6796011111.469400.328804.576603.17750K562PUM1
CMPK1ENSG00000162368.99948.314206748.433800.559807.812306.94630K562PUS1
CMPK1ENSG00000162368.98133.657205196.781500.646204.548402.66220K562RAVER1
CMPK1ENSG00000162368.99796.999606575.350200.5752015.0722013.67300K562RBM15
CMPK1ENSG00000162368.96324.976205167.643400.291503.246501.79620K562RBM25
CMPK1ENSG00000162368.92841.054004143.85710-0.544503.281702.18230K562RPS3
CMPK1ENSG00000162368.95152.235303703.040000.476403.699302.14500K562RRP9
CMPK1ENSG00000162368.93224.068304438.13380-0.461102.862001.87040K562SF3B1
CMPK1ENSG00000162368.92359.214103661.86560-0.634303.439102.26280K562SRFBP1
CMPK1ENSG00000162368.92563.818104001.16280-0.642103.686702.44720K562SRSF4
CMPK1ENSG00000162368.94472.232406176.10260-0.465702.615601.92640K562TARDBP
CMPK1ENSG00000162368.94309.678305957.30860-0.467102.876502.04010K562TIA1
CMPK1ENSG00000162368.92861.381804073.28590-0.509504.515503.29750K562TIAL1
CMPK1ENSG00000162368.97066.399805281.154300.420002.557301.51150K562U2AF1
CMPK1ENSG00000162368.96313.773005453.645800.211202.107901.40750K562U2AF2
CMPK1ENSG00000162368.911926.866109649.948200.305503.094402.17760K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CMPK1 is not available on ENCORE database.





5 RBPs can affect the splicing of CMPK1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECMPK1ENSG00000162368.9chr1+478405804784065747838626478387794784086847840965-0.069000.000000.00000excludedK562AQR
MXECMPK1ENSG00000162368.9chr1+47838626478387794784058047840657478341404783428747840868478409650.055000.006380.085421includedHepG2U2AF1
MXECMPK1ENSG00000162368.9chr1+47838626478387794784058047840657478341404783428747840868478409650.108000.000750.018421includedHepG2FTO
MXECMPK1ENSG00000162368.9chr1+47838626478387794784058047840657478341404783428747840868478409650.151000.000270.057631includedK562SDAD1
MXECMPK1ENSG00000162368.9chr1+4783862647838779478405804784065747834140478342874784086847840965-0.060000.000770.028792includedHepG2RBFOX2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CMPK1 is not avaliable on ENCORE database.