ARID1A

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ARID1A	ENSG00000117713.19	37.23	51.10	44.16	ENCSR000AEF
HepG2	ARID1A	ENSG00000117713.19	35.87	27.64	31.75	ENCSR985KAT
K562	ARID1A	ENSG00000117713.19	57.04	47.17	52.11	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ARID1A is not avaliable on ENCORE database.

Proteins bound to RNA

ARID1A RNA is bound by 75 proteins.

eCLIP assay for ARID1A is not avaliable on ENCORE database.

75 proteins are bound to ARID1A RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	27105503	27105544	+	3'-UTR,CDS,intron-Proximal	3.71123	8.92089	K562	BUD13
chr1	27105510	27105547	+	3'-UTR,CDS,intron-Proximal	3.42869	4.13733	K562	SMNDC1
chr1	27108360	27108415	+	3'-UTR	3.01941	11.08983	K562	TIA1
chr1	27108359	27108382	+	3'-UTR	4.50854	3.29312	HepG2	FXR2
chr1	27108373	27108410	+	3'-UTR	3.18911	8.62567	K562	ZC3H11A
chr1	27108071	27108112	+	3'-UTR	3.16641	4.38470	K562	TIA1
chr1	27107349	27107385	+	3'-UTR	3.33098	10.67861	HepG2	PCBP2
chr1	27106058	27106082	+	3'-UTR,CDS	3.36728	3.93112	K562	RBM15
chr1	27105734	27105863	+	3'-UTR,CDS	3.41128	27.67291	K562	UCHL5
chr1	27056142	27056177	+	3'-UTR,5'-UTR,CDS	3.74308	8.66868	K562	BUD13
chr1	27107340	27107492	+	3'-UTR	5.01971	32.84777	K562	PCBP1
chr1	27106375	27106446	+	3'-UTR,CDS	4.60459	7.12836	K562	FXR1
chr1	27108345	27108406	+	3'-UTR	3.06548	3.17814	K562	U2AF1
chr1	27105496	27105553	+	3'-UTR,CDS,intron-Proximal	4.19107	16.46564	K562	U2AF1
chr1	27105890	27105943	+	3'-UTR,CDS	3.33265	7.48787	K562	RBM15
chr1	27105646	27105706	+	3'-UTR,CDS	3.27290	13.67826	K562	ZNF622
chr1	27107417	27107486	+	3'-UTR	3.74709	4.85299	HepG2	PCBP1
chr1	27107879	27107897	+	3'-UTR	5.35472	15.89350	K562	PUM2
chr1	27105559	27105582	+	3'-UTR,CDS	3.90502	11.16044	K562	YBX3
chr1	27106208	27106258	+	3'-UTR,CDS	4.36583	8.71170	K562	RBM15
chr1	27106688	27106751	+	3'-UTR,CDS	3.54390	7.69141	K562	RBM15
chr1	27105660	27105726	+	3'-UTR,CDS	3.70184	5.07065	HepG2	TRA2A
chr1	27106308	27106348	+	3'-UTR,CDS	4.30889	6.78826	K562	FXR2
chr1	27106852	27106912	+	3'-UTR,CDS	4.44457	7.84586	HepG2	EIF3H
chr1	27105613	27105735	+	3'-UTR,CDS	3.10191	13.57509	K562	BUD13
chr1	27108176	27108212	+	3'-UTR	5.36275	65.51758	K562	PUM2
chr1	27108108	27108176	+	3'-UTR	6.42488	400.00000	K562	PUM2
chr1	27106714	27106749	+	3'-UTR,CDS	3.37486	9.11324	K562	IGF2BP2
chr1	27108074	27108109	+	3'-UTR	3.71693	4.30970	K562	IGF2BP2
chr1	27108352	27108395	+	3'-UTR	4.22910	3.07706	HepG2	TIAL1
chr1	27105536	27105560	+	3'-UTR,CDS	3.63092	10.36297	K562	U2AF2
chr1	27105631	27105734	+	3'-UTR,CDS	4.20808	25.84872	K562	UCHL5
chr1	27105501	27105547	+	3'-UTR,CDS,intron-Proximal	3.91011	8.08874	K562	SF3B4
chr1	27107385	27107442	+	3'-UTR	5.11602	50.47877	HepG2	PCBP2
chr1	27108358	27108407	+	3'-UTR	3.92661	42.35211	K562	PUM2
chr1	27105720	27105807	+	3'-UTR,CDS	4.31589	11.91109	HepG2	BCLAF1
chr1	27106388	27106443	+	3'-UTR,CDS	3.10627	5.09318	K562	FMR1
chr1	27105807	27105923	+	3'-UTR,CDS	3.42259	12.29797	HepG2	BCLAF1
chr1	27056126	27056175	+	3'-UTR,5'-UTR,CDS,intron-Proximal	3.52731	6.51619	K562	AQR
chr1	27105493	27105519	+	3'-UTR,CDS,intron-Proximal	6.17729	22.57400	K562	U2AF2
chr1	27106221	27106241	+	3'-UTR,CDS	4.26583	3.29312	HepG2	FXR2
chr1	27105713	27105797	+	3'-UTR,CDS	3.14372	7.10301	K562	ZNF800
chr1	27105582	27105631	+	3'-UTR,CDS	3.13808	5.78926	K562	YBX3
chr1	27106549	27106592	+	3'-UTR,CDS	4.53404	4.22893	K562	RBM15
chr1	27105658	27105720	+	3'-UTR,CDS	5.46914	10.12910	HepG2	BCLAF1
chr1	27106061	27106099	+	3'-UTR,CDS	4.34718	4.83675	HepG2	G3BP1
chr1	27107308	27107368	+	3'-UTR	3.92453	16.10179	K562	TARDBP
chr1	27105488	27105559	+	3'-UTR,CDS,intron-Proximal	4.69388	13.76607	HepG2	U2AF2
chr1	27108505	27108535	+	3'-UTR	4.31636	4.48843	K562	TIA1
chr1	27107677	27107720	+	3'-UTR	4.89314	17.28377	K562	PABPC4
chr1	27106288	27106345	+	3'-UTR,CDS	3.00850	4.41501	K562	MTPAP
chr1	27107442	27107520	+	3'-UTR	5.56069	51.89069	HepG2	PCBP2
chr1	27105745	27105806	+	3'-UTR,CDS	3.85138	6.05315	HepG2	FXR2
chr1	27105646	27105733	+	3'-UTR,CDS	3.42829	9.39213	K562	SRSF1
chr1	27108033	27108108	+	3'-UTR	4.98460	400.00000	K562	PUM2
chr1	27108130	27108177	+	3'-UTR	5.07654	4.32365	K562	PCBP1
chr1	27106288	27106349	+	3'-UTR,CDS	4.11166	6.70275	K562	RBM15
chr1	27105953	27106007	+	3'-UTR,CDS	3.66466	4.87139	HepG2	FXR2
chr1	27107586	27107627	+	3'-UTR	3.79078	5.76576	K562	PABPC4
chr1	27106283	27106347	+	3'-UTR,CDS	3.53612	6.69265	K562	FMR1
chr1	27106141	27106163	+	3'-UTR,CDS	3.15272	3.40391	K562	XRCC6
chr1	27106873	27106907	+	3'-UTR,CDS	3.79264	5.37099	K562	FXR2
chr1	27105747	27105849	+	3'-UTR,CDS	4.52007	9.38999	HepG2	G3BP1
chr1	27105516	27105542	+	3'-UTR,CDS	4.24731	4.48994	K562	RBM15
chr1	27108227	27108314	+	3'-UTR	4.76122	56.70465	K562	PUM2
chr1	27105590	27105631	+	3'-UTR,CDS	3.19379	6.02234	K562	UCHL5
chr1	27107277	27107308	+	3'-UTR	4.13293	17.18257	K562	TARDBP
chr1	27105489	27105540	+	3'-UTR,CDS,intron-Proximal	4.57707	9.04436	K562	AQR
chr1	27105656	27105724	+	3'-UTR,CDS	3.60453	9.28840	K562	AGGF1
chr1	27106381	27106457	+	3'-UTR,CDS	5.12789	11.86354	K562	FXR2
chr1	27108357	27108373	+	3'-UTR	3.35376	8.97082	K562	ZC3H11A
chr1	27106057	27106154	+	3'-UTR,CDS	3.50297	10.63268	K562	UCHL5
chr1	27105745	27105805	+	3'-UTR,CDS	3.41478	8.90703	K562	RBM15
chr1	27107721	27107808	+	3'-UTR	3.82718	4.96321	K562	LIN28B
chr1	27106701	27106753	+	3'-UTR,CDS	4.35690	9.23091	K562	FXR2
chr1	27105738	27105844	+	3'-UTR,CDS	3.06765	4.12847	K562	FXR1
chr1	27108114	27108156	+	3'-UTR	4.75162	5.50941	K562	PUM1
chr1	27105886	27105950	+	3'-UTR,CDS	5.49268	9.49599	K562	FMR1
chr1	27105519	27105536	+	3'-UTR,CDS	6.20619	23.22313	K562	U2AF2
chr1	27105894	27105953	+	3'-UTR,CDS	5.28559	5.85077	HepG2	FXR2
chr1	27022838	27022891	+	5'-UTR	3.47048	15.52740	HepG2	BUD13
chr1	27022831	27022935	+	5'-UTR,CDS	3.16525	11.54693	K562	XRN2
chr1	27022539	27022585	+	5'-UTR	4.93188	3.69821	K562	DDX3X
chr1	27099848	27099928	+	5'-UTR,CDS	5.36691	9.49599	K562	FMR1
chr1	27022658	27022704	+	5'-UTR	3.00220	4.91382	K562	DDX6
chr1	27100064	27100122	+	5'-UTR,CDS,intron-Proximal	3.76315	3.19080	K562	U2AF2
chr1	27022597	27022638	+	5'-UTR	4.13971	3.99137	K562	NONO
chr1	27022837	27022885	+	5'-UTR	3.25105	14.76467	HepG2	DDX3X
chr1	27022670	27022716	+	5'-UTR	4.19601	9.69783	K562	DHX30
chr1	27099845	27099955	+	5'-UTR,CDS	3.19550	6.47139	HepG2	PPIG
chr1	27100388	27100394	+	5'-UTR,CDS,intron-Proximal	3.64651	17.47597	K562	AQR
chr1	27100388	27100438	+	5'-UTR,CDS,intron-Proximal	3.85272	5.04653	K562	SF3B4
chr1	27099476	27099546	+	5'-UTR,CDS,intron-Proximal	3.29549	7.78008	K562	PRPF8
chr1	27022605	27022646	+	5'-UTR	3.96810	5.66107	K562	FXR2
chr1	27022837	27022894	+	5'-UTR	4.22742	5.50166	HepG2	FXR2
chr1	27022588	27022625	+	5'-UTR	3.26169	4.36184	HepG2	PRPF4
chr1	27100162	27100208	+	5'-UTR,CDS	3.50703	3.84724	HepG2	IGF2BP1
chr1	27022603	27022636	+	5'-UTR	3.52493	9.42191	HepG2	NKRF
chr1	27022838	27022888	+	5'-UTR	4.85764	22.82941	K562	GTF2F1
chr1	27022609	27022654	+	5'-UTR	3.91957	4.02638	HepG2	SLTM
chr1	27022837	27022891	+	5'-UTR	3.14353	6.26546	K562	EXOSC5
chr1	27022887	27022926	+	5'-UTR,CDS	3.84929	6.02286	HepG2	PRPF4
chr1	27102197	27102275	+	5'-UTR,CDS,intron-Proximal	3.45855	17.28328	K562	AQR
chr1	27022839	27022893	+	5'-UTR	4.17916	12.40838	HepG2	GTF2F1
chr1	27022597	27022635	+	5'-UTR	4.00666	3.58513	HepG2	GTF2F1
chr1	27022838	27022895	+	5'-UTR	3.02242	20.98754	K562	CSTF2T
chr1	27022851	27022951	+	5'-UTR,CDS	3.01027	7.02037	HepG2	FTO
chr1	27022585	27022645	+	5'-UTR	4.42609	5.47892	K562	DDX3X
chr1	27100317	27100375	+	5'-UTR,CDS	3.25317	7.75976	K562	IGF2BP2
chr1	27022818	27022879	+	5'-UTR	3.14694	27.28241	K562	GEMIN5
chr1	27022608	27022654	+	5'-UTR	4.17962	3.83114	K562	DGCR8
chr1	27022645	27022709	+	5'-UTR	4.63546	17.42902	K562	SDAD1
chr1	27022834	27022883	+	5'-UTR	3.90270	6.95413	HepG2	PCBP2
chr1	27022534	27022684	+	5'-UTR	3.30427	7.14767	HepG2	EXOSC5
chr1	27022652	27022711	+	5'-UTR	3.75077	6.03610	K562	DDX51
chr1	27022839	27022886	+	5'-UTR	4.14385	12.62791	HepG2	PRPF4
chr1	27022834	27022950	+	5'-UTR,CDS	3.72910	18.71534	HepG2	XRN2
chr1	27022827	27022895	+	5'-UTR	3.65204	14.55765	K562	DDX6
chr1	27022595	27022659	+	5'-UTR	3.01857	11.62722	K562	CSTF2T
chr1	27022833	27022926	+	5'-UTR,CDS	3.53464	11.37589	HepG2	SLTM
chr1	27100314	27100390	+	5'-UTR,CDS,intron-Proximal	3.42091	7.95900	HepG2	IGF2BP1
chr1	27022885	27022896	+	5'-UTR,CDS	3.60590	11.71276	HepG2	NKRF
chr1	27022841	27022883	+	5'-UTR	3.47414	3.77385	HepG2	NCBP2
chr1	27022646	27022694	+	5'-UTR	3.63631	6.11658	K562	FXR2
chr1	27022596	27022644	+	5'-UTR	4.00358	4.77154	HepG2	NCBP2
chr1	27022657	27022712	+	5'-UTR	4.45451	13.07964	K562	GEMIN5
chr1	27022891	27022939	+	5'-UTR,CDS	3.58063	7.66618	K562	FXR2
chr1	27022845	27022888	+	5'-UTR	3.12837	6.65384	K562	UCHL5
chr1	27092790	27092833	+	CDS	3.55940	9.89497	K562	ZNF622
chr1	27087954	27088013	+	CDS,intron-Proximal	4.63025	11.43008	HepG2	PRPF8
chr1	27094441	27094488	+	CDS	3.95573	7.88406	K562	DDX24
chr1	27101036	27101079	+	CDS,intron-Distal	3.24072	5.80916	K562	IGF2BP2
chr1	27092649	27092740	+	CDS,intron-Proximal	5.95681	25.28681	K562	SF3B4
chr1	27092696	27092743	+	CDS,intron-Proximal	3.74566	6.17334	HepG2	U2AF2
chr1	27100772	27100854	+	CDS,intron-Distal,intron-Proximal	3.70071	9.56000	K562	SF3B4
chr1	27100826	27100903	+	CDS,intron-Distal	3.09862	6.75486	K562	UCHL5
chr1	27087875	27087921	+	CDS	3.60400	4.59151	HepG2	G3BP1
chr1	27023306	27023332	+	CDS	3.83378	3.26022	HepG2	PRPF4
chr1	27093013	27093046	+	CDS	3.42259	3.57857	HepG2	BCLAF1
chr1	27094437	27094496	+	CDS,intron-Proximal	3.41025	10.70659	K562	BUD13
chr1	27094489	27094511	+	CDS,intron-Proximal	4.46454	7.15298	K562	AQR
chr1	27100775	27100892	+	CDS,intron-Distal,intron-Proximal	3.01314	4.61019	K562	GPKOW
chr1	27087586	27087652	+	CDS,intron-Proximal	4.72183	14.93855	K562	AQR
chr1	27057842	27057964	+	CDS	4.34829	24.07613	HepG2	IGF2BP1
chr1	27023155	27023207	+	CDS	3.59630	13.05681	K562	CSTF2T
chr1	27097620	27097675	+	CDS	5.09131	9.32383	K562	DDX24
chr1	27092692	27092745	+	CDS,intron-Proximal	4.46513	19.95603	K562	BUD13
chr1	27088809	27088851	+	CDS,intron-Proximal	5.22835	12.60993	K562	AQR
chr1	27089490	27089552	+	CDS	3.31204	6.56666	K562	YBX3
chr1	27059170	27059226	+	CDS	3.25636	6.79753	K562	IGF2BP1
chr1	27087850	27087908	+	CDS,intron-Proximal	3.00535	4.58271	K562	AQR
chr1	27100789	27100867	+	CDS,intron-Distal,intron-Proximal	3.78407	9.27256	K562	BUD13
chr1	27097720	27097786	+	CDS	3.68600	7.09919	K562	RBM15
chr1	27022901	27022945	+	CDS	3.65272	11.21695	K562	GEMIN5
chr1	27092947	27093039	+	CDS,intron-Proximal	3.09520	3.29600	K562	LIN28B
chr1	27023130	27023191	+	CDS	3.82180	25.97794	K562	GEMIN5
chr1	27023311	27023344	+	CDS	3.57935	3.77433	K562	XRN2
chr1	27058040	27058095	+	CDS	3.73389	3.08588	HepG2	IGF2BP3
chr1	27023301	27023342	+	CDS	3.04802	5.71762	K562	CSTF2T
chr1	27058029	27058041	+	CDS	4.05050	3.83024	HepG2	IGF2BP1
chr1	27089444	27089492	+	CDS,intron-Proximal	3.48566	5.31212	K562	U2AF1
chr1	27057721	27057786	+	CDS	3.80794	3.45687	HepG2	IGF2BP3
chr1	27097548	27097618	+	CDS,intron-Proximal	5.06316	12.52998	K562	SF3B4
chr1	27057788	27057842	+	CDS	3.56305	13.34294	HepG2	IGF2BP1
chr1	27022991	27023045	+	CDS	3.59876	10.45893	HepG2	NKRF
chr1	27088725	27088779	+	CDS	3.03565	8.19758	K562	YBX3
chr1	27087556	27087587	+	CDS	4.50254	4.08466	HepG2	IGF2BP1
chr1	27097816	27097828	+	CDS,intron-Proximal	3.57042	8.77060	K562	AQR
chr1	27023125	27023188	+	CDS	4.80311	7.89537	HepG2	SLTM
chr1	27101398	27101459	+	CDS,intron-Distal,intron-Proximal	3.49309	6.58490	K562	IGF2BP2
chr1	27092991	27092997	+	CDS	3.63076	6.56666	K562	YBX3
chr1	27101086	27101140	+	CDS,intron-Distal	3.00580	8.59019	K562	ZNF622
chr1	27089775	27089787	+	CDS,intron-Proximal	5.49653	5.58150	K562	SF3B4
chr1	27099328	27099390	+	CDS	3.39266	10.62736	K562	ZNF622
chr1	27023059	27023089	+	CDS	3.81792	3.63122	HepG2	PRPF4
chr1	27023952	27024022	+	CDS	3.17563	5.29232	HepG2	CSTF2T
chr1	27101234	27101292	+	CDS,intron-Distal	3.89590	8.35801	K562	FXR2
chr1	27101090	27101141	+	CDS,intron-Distal	3.90026	13.02852	K562	RBM15
chr1	27099365	27099412	+	CDS	3.63011	6.67313	HepG2	BCLAF1
chr1	27092849	27092898	+	CDS,intron-Proximal	3.15245	5.83656	K562	PRPF8
chr1	27059166	27059179	+	CDS,intron-Proximal	3.30477	8.22413	K562	IGF2BP2
chr1	27089446	27089495	+	CDS,intron-Proximal	3.78892	5.72475	K562	U2AF2
chr1	27101087	27101138	+	CDS,intron-Distal	4.83078	7.57924	K562	YBX3
chr1	27087451	27087565	+	CDS	3.29348	14.12386	K562	PCBP1
chr1	27059254	27059289	+	CDS,intron-Proximal	3.45316	3.64266	HepG2	PPIG
chr1	27092677	27092727	+	CDS,intron-Proximal	4.68137	11.83800	K562	AQR
chr1	27023836	27023886	+	CDS	3.33321	5.91153	HepG2	CSTF2T
chr1	27101068	27101139	+	CDS,intron-Distal	4.15767	12.19027	K562	IGF2BP1
chr1	27057789	27057956	+	CDS	3.48551	8.93976	HepG2	DDX59
chr1	27102228	27102330	+	CDS,intron-Distal,intron-Proximal	4.15315	7.65747	HepG2	EFTUD2
chr1	27092691	27092748	+	CDS,intron-Proximal	4.40773	4.20812	K562	U2AF1
chr1	27023113	27023178	+	CDS	3.25906	3.50935	K562	TBRG4
chr1	27058058	27058095	+	CDS	3.50375	9.86983	K562	IGF2BP2
chr1	27023098	27023196	+	CDS	3.92594	27.32762	HepG2	NKRF
chr1	27089749	27089776	+	CDS	4.12414	3.83925	K562	YBX3
chr1	27087874	27087918	+	CDS,intron-Proximal	4.57266	4.84422	HepG2	IGF2BP1
chr1	27101032	27101070	+	CDS,intron-Distal	4.37998	3.57526	HepG2	IGF2BP1
chr1	27023108	27023218	+	CDS	3.22119	11.74139	HepG2	PPIG
chr1	27057818	27057937	+	CDS	3.34799	13.76053	HepG2	PCBP2
chr1	27023057	27023094	+	CDS	3.97759	5.56169	K562	XRN2
chr1	27023045	27023098	+	CDS	4.66217	16.24045	HepG2	NKRF
chr1	27088790	27088807	+	CDS	3.34220	8.15127	K562	ZNF622
chr1	27099305	27099370	+	CDS,intron-Proximal	3.30800	9.29110	K562	DDX24
chr1	27023901	27023951	+	CDS	3.73356	11.37064	K562	GEMIN5
chr1	27100818	27100867	+	CDS,intron-Distal,intron-Proximal	3.10475	4.61266	K562	IGF2BP1
chr1	27092658	27092738	+	CDS,intron-Proximal	4.45403	8.64318	K562	GPKOW
chr1	27092666	27092727	+	CDS,intron-Proximal	3.10580	5.24517	HepG2	BUD13
chr1	27101092	27101141	+	CDS,intron-Distal	3.13970	6.69263	K562	FXR2
chr1	27023302	27023332	+	CDS	3.06615	5.27455	HepG2	NKRF
chr1	27101013	27101065	+	CDS,intron-Distal	3.50760	6.87242	K562	DDX24
chr1	27089460	27089469	+	CDS,intron-Proximal	4.74336	4.65563	K562	AQR
chr1	27087367	27087409	+	CDS	4.11165	3.97054	K562	IGF2BP1
chr1	27097812	27097865	+	CDS,intron-Proximal	3.52274	7.29769	HepG2	PRPF8
chr1	27057798	27057838	+	CDS	3.49016	10.06485	K562	IGF2BP2
chr1	27092941	27092989	+	CDS,intron-Proximal	3.46601	7.53508	HepG2	BUD13
chr1	27101082	27101146	+	CDS,intron-Distal	3.15330	3.61755	HepG2	FXR2
chr1	27093019	27093053	+	CDS	3.27727	6.74819	K562	YBX3
chr1	27022978	27023016	+	CDS	3.64179	3.44435	HepG2	FTO
chr1	27057991	27058058	+	CDS	4.06084	13.36084	K562	IGF2BP2
chr1	27057786	27057989	+	CDS	3.56655	12.00353	HepG2	IGF2BP3
chr1	27057838	27057991	+	CDS	3.97732	34.93832	K562	IGF2BP2
chr1	27101466	27101508	+	CDS,intron-Distal,intron-Proximal	3.63712	7.10975	K562	UCHL5
chr1	27023976	27024008	+	CDS	3.25919	3.82829	K562	IGF2BP2
chr1	27057716	27057783	+	CDS	3.31503	11.25451	HepG2	IGF2BP1
chr1	27023342	27023396	+	CDS	3.26085	7.54132	K562	GEMIN5
chr1	27092933	27092985	+	CDS,intron-Proximal	3.54772	8.74065	K562	SF3B4
chr1	27092997	27093005	+	CDS	3.27649	6.18483	K562	YBX3
chr1	27023067	27023105	+	CDS	3.32467	4.70352	K562	SLTM
chr1	27092820	27092893	+	CDS,intron-Proximal	3.76655	4.54206	HepG2	PRPF8
chr1	27023105	27023184	+	CDS	3.21599	11.54619	K562	SLTM
chr1	27093005	27093019	+	CDS	3.70203	10.23390	K562	YBX3
chr1	27087537	27087589	+	CDS,intron-Proximal	3.86630	12.73707	K562	DDX24
chr1	27087349	27087382	+	CDS	3.10773	5.33841	K562	DDX24
chr1	27057722	27057818	+	CDS	3.30005	8.29139	HepG2	PCBP2
chr1	27101559	27101571	+	CDS,intron-Distal	3.22575	6.05769	K562	ZNF622
chr1	27097599	27097637	+	CDS,intron-Proximal	3.56453	5.85200	K562	BUD13
chr1	27094454	27094492	+	CDS,intron-Proximal	3.62368	4.13746	HepG2	PPIG
chr1	27092697	27092744	+	CDS,intron-Proximal	4.34906	10.39791	K562	U2AF2
chr1	27023887	27023950	+	CDS	3.45706	12.34446	HepG2	NKRF
chr1	27059179	27059251	+	CDS	3.14032	10.30987	K562	IGF2BP2
chr1	27056216	27056259	+	CDS	3.19156	3.81856	K562	IGF2BP1
chr1	27101710	27101723	+	CDS,intron-Distal,intron-Proximal	3.98134	7.79506	K562	AQR
chr1	27059166	27059268	+	CDS,intron-Proximal	3.40862	4.73400	K562	NOLC1
chr1	27057780	27057844	+	CDS	4.10335	9.87150	K562	UCHL5
chr1	27101459	27101523	+	CDS,intron-Distal,intron-Proximal	3.61284	8.16517	K562	IGF2BP2
chr1	27028581	27028624	+	intron-Distal	3.62957	12.49695	K562	EXOSC5
chr1	27024345	27024391	+	intron-Distal	3.46569	4.46248	HepG2	FAM120A
chr1	27024123	27024152	+	intron-Distal,intron-Proximal	3.92591	8.93263	HepG2	NKRF
chr1	27030711	27030796	+	intron-Distal	3.07981	3.10855	K562	EXOSC5
chr1	27024924	27025015	+	intron-Distal	3.16473	8.33053	HepG2	SUGP2
chr1	27031459	27031529	+	intron-Distal	5.67061	30.40760	HepG2	ILF3
chr1	27025482	27025495	+	intron-Distal	4.63133	11.36991	K562	HNRNPM
chr1	27048249	27048318	+	intron-Distal	5.05803	8.15874	K562	HNRNPM
chr1	27029836	27029898	+	intron-Distal	3.34486	3.66782	HepG2	HNRNPM
chr1	27037830	27037920	+	intron-Distal	4.06536	7.24277	HepG2	ILF3
chr1	27026547	27026591	+	intron-Distal	4.23189	6.40934	HepG2	HNRNPM
chr1	27024067	27024141	+	intron-Distal,intron-Proximal	4.28595	9.93297	HepG2	EFTUD2
chr1	27051229	27051343	+	intron-Distal	3.49565	8.02804	HepG2	HNRNPM
chr1	27026014	27026055	+	intron-Distal	4.83057	6.19745	HepG2	HNRNPM
chr1	27062276	27062318	+	intron-Distal	3.96184	4.69074	K562	PTBP1
chr1	27033301	27033337	+	intron-Distal	4.88609	5.72853	HepG2	HNRNPM
chr1	27063618	27063699	+	intron-Distal	3.79841	6.58753	K562	ILF3
chr1	27028619	27028667	+	intron-Distal	4.85572	6.52794	HepG2	MATR3
chr1	27037009	27037104	+	intron-Distal	3.20299	25.20281	K562	AGGF1
chr1	27025369	27025389	+	intron-Distal	4.35361	30.44614	K562	EXOSC5
chr1	27025148	27025214	+	intron-Distal	3.18865	7.25521	HepG2	SUGP2
chr1	27050938	27050993	+	intron-Distal	4.81626	13.41136	HepG2	HNRNPM
chr1	27061619	27061661	+	intron-Distal	3.34150	4.23034	HepG2	HNRNPC
chr1	27032969	27033039	+	intron-Distal	4.99721	30.02925	K562	HNRNPM
chr1	27032795	27032855	+	intron-Distal	4.53887	9.39985	K562	EXOSC5
chr1	27028588	27028696	+	intron-Distal	3.50108	10.90285	HepG2	SUGP2
chr1	27024419	27024471	+	intron-Distal	3.98016	6.29761	HepG2	MATR3
chr1	27048311	27048383	+	intron-Distal	3.50864	5.13070	HepG2	HNRNPM
chr1	27024346	27024410	+	intron-Distal	4.27535	6.81250	K562	FASTKD2
chr1	27024349	27024403	+	intron-Distal	3.63104	6.31916	HepG2	SUGP2
chr1	27032368	27032420	+	intron-Distal	3.80482	8.47709	K562	EXOSC5
chr1	27028830	27028923	+	intron-Distal	4.06239	3.28841	HepG2	PTBP1
chr1	27027465	27027498	+	intron-Distal	3.84816	4.57394	K562	HNRNPM
chr1	27025649	27025710	+	intron-Distal	4.87895	25.66511	K562	EXOSC5
chr1	27024587	27024648	+	intron-Distal	3.42957	7.64589	K562	HNRNPM
chr1	27032964	27033037	+	intron-Distal	3.36260	7.92702	HepG2	HNRNPM
chr1	27026109	27026141	+	intron-Distal	4.84351	6.84124	HepG2	SUGP2
chr1	27028634	27028684	+	intron-Distal	4.08076	14.16794	K562	EXOSC5
chr1	27025063	27025101	+	intron-Distal	4.83818	24.04923	K562	EXOSC5
chr1	27037791	27037837	+	intron-Distal	3.05879	3.37821	K562	ILF3
chr1	27087213	27087298	+	intron-Distal,intron-Proximal	3.12561	5.98045	K562	KHSRP
chr1	27026000	27026055	+	intron-Distal	4.84271	16.69883	K562	EXOSC5
chr1	27024352	27024404	+	intron-Distal	3.30976	3.01278	HepG2	MATR3
chr1	27030983	27031021	+	intron-Distal	4.53454	4.80399	K562	EXOSC5
chr1	27048129	27048214	+	intron-Distal	3.11886	3.07411	K562	LIN28B
chr1	27028527	27028583	+	intron-Distal	4.31626	17.47143	K562	HNRNPM
chr1	27025853	27025899	+	intron-Distal	4.82315	26.31286	K562	EXOSC5
chr1	27026632	27026676	+	intron-Distal	3.18719	3.95434	K562	HNRNPM
chr1	27094780	27094809	+	intron-Distal	3.40517	3.54718	K562	PRPF8
chr1	27025600	27025643	+	intron-Distal	3.74141	12.24074	K562	EXOSC5
chr1	27024357	27024401	+	intron-Distal	3.84093	6.09306	K562	NONO
chr1	27028630	27028678	+	intron-Distal	3.85698	13.65946	K562	HNRNPM
chr1	27051009	27051064	+	intron-Distal	4.30541	3.97018	HepG2	HNRNPM
chr1	27028539	27028600	+	intron-Distal	3.27076	4.95510	HepG2	MATR3
chr1	27037067	27037141	+	intron-Distal	3.71805	11.70848	K562	HNRNPL
chr1	27025265	27025326	+	intron-Distal	4.50629	24.64455	K562	EXOSC5
chr1	27051013	27051074	+	intron-Distal	4.41489	4.51309	K562	HNRNPM
chr1	27024359	27024403	+	intron-Distal	4.53390	15.47125	K562	EXOSC5
chr1	27028455	27028500	+	intron-Distal	3.81523	4.81774	K562	HNRNPM
chr1	27024923	27025008	+	intron-Distal	4.22408	18.94074	K562	EXOSC5
chr1	27070768	27070872	+	intron-Distal	4.21288	3.33944	K562	MATR3
chr1	27032957	27033027	+	intron-Distal	3.44202	12.47830	K562	EXOSC5
chr1	27039862	27039911	+	intron-Distal	3.35936	8.07122	HepG2	HNRNPC
chr1	27032533	27032567	+	intron-Distal	3.57008	5.85289	K562	EXOSC5
chr1	27029222	27029294	+	intron-Distal	3.04950	3.33716	HepG2	TAF15
chr1	27028559	27028672	+	intron-Distal	4.89649	5.05990	HepG2	EXOSC5
chr1	27025338	27025369	+	intron-Distal	4.84925	29.84734	K562	EXOSC5
chr1	27051492	27051550	+	intron-Distal	3.33484	4.74410	K562	EXOSC5
chr1	27026646	27026662	+	intron-Distal	3.22421	3.34056	HepG2	MATR3
chr1	27031533	27031578	+	intron-Distal	3.88325	5.09850	K562	ILF3
chr1	27030904	27030988	+	intron-Distal	4.75885	12.24874	HepG2	HNRNPM
chr1	27029198	27029210	+	intron-Distal	4.09376	7.31365	K562	EXOSC5
chr1	27026448	27026485	+	intron-Distal	3.83352	12.53155	K562	EXOSC5
chr1	27024532	27024562	+	intron-Distal	3.28813	3.68481	HepG2	HNRNPM
chr1	27024488	27024527	+	intron-Distal	3.55418	3.87714	K562	DDX52
chr1	27047477	27047532	+	intron-Distal	3.88243	4.39734	K562	XRCC6
chr1	27066332	27066408	+	intron-Distal	3.63580	7.58331	K562	PTBP1
chr1	27024791	27024801	+	intron-Distal	3.99119	3.57432	K562	NONO
chr1	27025495	27025539	+	intron-Distal	4.31915	7.67565	HepG2	HNRNPM
chr1	27028532	27028588	+	intron-Distal	3.78179	9.75331	HepG2	SUGP2
chr1	27026196	27026229	+	intron-Distal	4.75259	12.54948	K562	EXOSC5
chr1	27033156	27033253	+	intron-Distal	4.21941	16.90907	K562	HNRNPM
chr1	27030785	27030891	+	intron-Distal	4.36675	14.29584	HepG2	HNRNPM
chr1	27048211	27048311	+	intron-Distal	3.61800	5.72132	HepG2	HNRNPM
chr1	27076846	27076904	+	intron-Distal	4.35917	4.53244	K562	HNRNPM
chr1	27033250	27033336	+	intron-Distal	3.27840	4.45679	K562	NONO
chr1	27025523	27025527	+	intron-Distal	4.37930	5.31529	HepG2	SUGP2
chr1	27025454	27025493	+	intron-Distal	4.03454	11.75771	K562	EXOSC5
chr1	27024418	27024479	+	intron-Distal	3.65256	10.93726	K562	HNRNPM
chr1	27026391	27026436	+	intron-Distal	3.05654	11.21800	K562	EXOSC5
chr1	27026649	27026671	+	intron-Distal	4.52141	3.86368	HepG2	HNRNPM
chr1	27025859	27025906	+	intron-Distal	4.34538	7.03471	K562	HNRNPM
chr1	27037022	27037067	+	intron-Distal	3.80077	12.57835	K562	HNRNPL
chr1	27062346	27062419	+	intron-Distal	4.58201	3.74583	HepG2	PTBP1
chr1	27026382	27026469	+	intron-Distal	3.04816	9.79377	HepG2	SUGP2
chr1	27031377	27031451	+	intron-Distal	4.01313	9.05443	K562	ILF3
chr1	27027446	27027465	+	intron-Distal	4.96046	6.62732	K562	HNRNPM
chr1	27024221	27024264	+	intron-Distal	4.86551	4.90095	K562	PTBP1
chr1	27047112	27047198	+	intron-Distal	3.15331	3.14580	K562	ILF3
chr1	27027458	27027484	+	intron-Distal	4.12716	3.62366	HepG2	HNRNPM
chr1	27024070	27024134	+	intron-Distal,intron-Proximal	3.40084	7.07641	HepG2	PRPF4
chr1	27045307	27045398	+	intron-Distal	4.50124	4.07352	K562	KHSRP
chr1	27027631	27027640	+	intron-Distal	3.55357	9.95742	K562	EXOSC5
chr1	27024124	27024164	+	intron-Distal,intron-Proximal	4.21180	9.24802	K562	CSTF2T
chr1	27025152	27025231	+	intron-Distal	4.09170	11.33090	HepG2	HNRNPM
chr1	27030725	27030774	+	intron-Distal	4.68615	13.15564	K562	HNRNPM
chr1	27025786	27025853	+	intron-Distal	3.89708	22.90312	K562	EXOSC5
chr1	27037036	27037161	+	intron-Distal	3.11948	7.12738	K562	ILF3
chr1	27027640	27027671	+	intron-Distal	3.33451	10.95347	K562	EXOSC5
chr1	27051160	27051194	+	intron-Distal	3.96153	3.30687	K562	EXOSC5
chr1	27025389	27025445	+	intron-Distal	4.20160	23.46746	K562	EXOSC5
chr1	27024067	27024256	+	intron-Distal,intron-Proximal	4.73429	21.61342	K562	NONO
chr1	27025811	27025842	+	intron-Distal	3.24065	4.61999	K562	HNRNPM
chr1	27027464	27027526	+	intron-Distal	4.76854	25.01815	K562	EXOSC5
chr1	27056408	27056459	+	intron-Distal,intron-Proximal	5.34168	11.56857	K562	RBM22
chr1	27026012	27026089	+	intron-Distal	4.33694	14.63574	HepG2	SUGP2
chr1	27030729	27030772	+	intron-Distal	5.30434	10.04692	HepG2	HNRNPM
chr1	27024668	27024736	+	intron-Distal	4.14316	19.19953	K562	EXOSC5
chr1	27050939	27050990	+	intron-Distal	3.99170	7.75103	K562	HNRNPM
chr1	27025844	27025914	+	intron-Distal	3.68755	11.16061	HepG2	SUGP2
chr1	27027396	27027454	+	intron-Distal	6.20318	18.99740	K562	EXOSC5
chr1	27033262	27033333	+	intron-Distal	3.77800	5.60995	K562	MATR3
chr1	27033161	27033239	+	intron-Distal	6.26776	20.69990	HepG2	HNRNPM
chr1	27066410	27066472	+	intron-Distal	3.67962	7.98298	HepG2	PTBP1
chr1	27027656	27027719	+	intron-Distal	3.31139	7.32436	HepG2	SUGP2
chr1	27024224	27024295	+	intron-Distal	3.74855	5.33544	K562	MATR3
chr1	27025358	27025410	+	intron-Distal	3.16144	5.79648	HepG2	MATR3
chr1	27028681	27028745	+	intron-Distal	5.46209	11.26125	HepG2	HNRNPM
chr1	27025082	27025127	+	intron-Distal	3.41234	6.31916	HepG2	SUGP2
chr1	27030906	27030972	+	intron-Distal	3.26968	7.08221	K562	HNRNPM
chr1	27027445	27027520	+	intron-Distal	4.00926	3.28464	K562	EWSR1
chr1	27025151	27025228	+	intron-Distal	4.09777	14.17250	K562	HNRNPM
chr1	27049095	27049148	+	intron-Distal	3.07981	3.10887	K562	EXOSC5
chr1	27032879	27032926	+	intron-Distal	3.91779	12.90174	K562	HNRNPM
chr1	27025101	27025128	+	intron-Distal	4.33310	16.34185	K562	EXOSC5
chr1	27030774	27030877	+	intron-Distal	5.95951	17.11433	K562	HNRNPM
chr1	27037167	27037216	+	intron-Distal	4.40658	4.71638	K562	HNRNPL
chr1	27024478	27024534	+	intron-Distal	3.90571	6.16211	K562	MATR3
chr1	27024720	27024762	+	intron-Distal	4.01707	5.78672	K562	HNRNPM
chr1	27032873	27032933	+	intron-Distal	4.05023	10.31219	K562	EXOSC5
chr1	27025553	27025600	+	intron-Distal	4.53466	16.65266	K562	EXOSC5
chr1	27031381	27031441	+	intron-Distal	4.17686	4.24441	HepG2	ILF3
chr1	27030683	27030729	+	intron-Distal	3.10996	4.73383	HepG2	HNRNPM
chr1	27036339	27036366	+	intron-Distal	3.77386	4.12420	K562	AGGF1
chr1	27024419	27024478	+	intron-Distal	3.19776	6.58022	K562	MATR3
chr1	27026245	27026288	+	intron-Distal	3.87909	10.00149	HepG2	SUGP2
chr1	27049309	27049352	+	intron-Distal	3.50902	4.61282	K562	EXOSC5
chr1	27024353	27024387	+	intron-Distal	3.70438	10.97289	HepG2	NKRF
chr1	27027474	27027531	+	intron-Distal	3.90872	3.06508	K562	HNRNPU
chr1	27024694	27024741	+	intron-Distal	3.42773	9.17667	K562	CSTF2T
chr1	27090280	27090342	+	intron-Distal	4.22704	5.02158	HepG2	ILF3
chr1	27028525	27028580	+	intron-Distal	3.07658	5.18206	HepG2	HNRNPM
chr1	27033358	27033421	+	intron-Distal	3.28161	3.38183	K562	NONO
chr1	27048608	27048691	+	intron-Distal	4.59646	4.90578	HepG2	HNRNPM
chr1	27024352	27024412	+	intron-Distal	4.62091	19.54341	K562	CSTF2T
chr1	27025495	27025529	+	intron-Distal	4.39123	13.77594	K562	HNRNPM
chr1	27026644	27026672	+	intron-Distal	3.43046	7.98857	K562	EXOSC5
chr1	27032272	27032329	+	intron-Distal	3.36582	7.12395	K562	EXOSC5
chr1	27048318	27048404	+	intron-Distal	3.14138	6.56756	K562	HNRNPM
chr1	27052678	27052730	+	intron-Distal	3.00737	3.42293	HepG2	HNRNPC
chr1	27025139	27025206	+	intron-Distal	4.50769	21.27178	K562	EXOSC5
chr1	27028623	27028668	+	intron-Distal	6.41553	22.08110	HepG2	HNRNPM
chr1	27027445	27027532	+	intron-Distal	3.81276	15.39621	HepG2	SUGP2
chr1	27101723	27101756	+	intron-Distal,intron-Proximal	6.02156	12.64691	K562	AQR
chr1	27024871	27024907	+	intron-Distal	3.16990	5.39330	K562	EXOSC5
chr1	27024361	27024389	+	intron-Distal	3.56143	4.38648	K562	DDX52
chr1	27026551	27026606	+	intron-Distal	3.27092	6.56756	K562	HNRNPM
chr1	27028583	27028630	+	intron-Distal	4.18684	21.27960	K562	HNRNPM
chr1	27025772	27025836	+	intron-Distal	3.97429	10.59974	K562	MATR3
chr1	27025926	27025967	+	intron-Distal	3.31086	10.95570	K562	EXOSC5
chr1	27056583	27056645	+	intron-Distal	3.37363	5.42704	K562	TIA1
chr1	27024578	27024649	+	intron-Distal	3.91232	9.42497	HepG2	HNRNPM
chr1	27031529	27031593	+	intron-Distal	5.51952	13.53164	HepG2	ILF3
chr1	27025236	27025265	+	intron-Distal	4.77574	10.61559	K562	EXOSC5
chr1	27066408	27066476	+	intron-Distal	4.79762	9.46053	K562	PTBP1
chr1	27024700	27024738	+	intron-Distal	3.21690	6.84019	HepG2	SUGP2
chr1	27025484	27025588	+	intron-Distal	3.37936	4.59644	K562	MATR3
chr1	27026487	27026517	+	intron-Distal	5.07850	15.47240	K562	EXOSC5
chr1	27028530	27028581	+	intron-Distal	3.85095	15.54455	K562	EXOSC5
chr1	27033292	27033343	+	intron-Distal	3.86624	5.78672	K562	HNRNPM
chr1	27032876	27032922	+	intron-Distal	5.54015	11.26125	HepG2	HNRNPM
chr1	27024937	27024977	+	intron-Distal	3.42060	5.34991	K562	HNRNPM
chr1	27025914	27025968	+	intron-Distal	3.99838	11.22696	HepG2	SUGP2
chr1	27048739	27048789	+	intron-Distal	4.43102	5.12361	K562	EXOSC5
chr1	27026017	27026046	+	intron-Distal	4.36353	6.02743	K562	HNRNPM
chr1	27028580	27028623	+	intron-Distal	4.01224	13.05579	HepG2	HNRNPM
chr1	27076846	27076898	+	intron-Distal	5.42283	8.33028	HepG2	HNRNPM
chr1	27024343	27024396	+	intron-Distal	3.75902	8.49423	K562	HNRNPM
chr1	27105458	27105501	+	intron-Proximal	5.02264	3.91589	K562	SF3B4
chr1	27094256	27094277	+	intron-Proximal	4.78459	4.13847	K562	AQR
chr1	27093081	27093142	+	intron-Proximal	4.82926	10.30362	K562	RBM22
chr1	27056354	27056409	+	intron-Proximal	5.46727	16.94745	K562	AQR
chr1	27057586	27057633	+	intron-Proximal	4.28345	13.54000	K562	SF3B4
chr1	27099482	27099526	+	intron-Proximal	6.54533	20.26131	K562	AQR
chr1	27056366	27056422	+	intron-Proximal	4.14621	7.08156	K562	PRPF8
chr1	27099478	27099482	+	intron-Proximal	6.07707	13.72936	K562	AQR
chr1	27100396	27100442	+	intron-Proximal	4.28983	5.42080	K562	EFTUD2
chr1	27099991	27100018	+	intron-Proximal	5.18554	4.83371	K562	EFTUD2
chr1	27094511	27094531	+	intron-Proximal	5.35879	7.63570	K562	AQR
chr1	27089776	27089820	+	intron-Proximal	6.96043	25.73615	K562	AQR
chr1	27089787	27089820	+	intron-Proximal	4.61575	5.68247	K562	SF3B4
chr1	27024072	27024124	+	intron-Proximal	3.39642	9.33001	K562	CSTF2T
chr1	27059283	27059334	+	intron-Proximal	3.28459	5.11990	K562	AQR
chr1	27100394	27100431	+	intron-Proximal	6.95075	25.73615	K562	AQR
chr1	27093060	27093117	+	intron-Proximal	4.51576	9.78712	K562	AQR
chr1	27099999	27100016	+	intron-Proximal	3.34743	3.20886	K562	PRPF8
chr1	27059283	27059351	+	intron-Proximal	4.16368	4.75655	HepG2	PRPF8
chr1	27097828	27097864	+	intron-Proximal	6.13789	12.64691	K562	AQR
chr1	27056383	27056408	+	intron-Proximal	6.27430	13.03887	K562	RBM22
chr1	27058096	27058139	+	intron-Proximal	4.49211	7.92018	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for ARID1A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ARID1A is not available on ENCORE database.
88 RBPs can affect the levels of ARID1A.

The Knockdown/knockout RNA-Seq assay for ARID1A is not available on ENCORE database.

88 RBPs can affect the gene expression of ARID1A :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ARID1A	ENSG00000117713.13	2562.85120	1935.88960	0.40470	3.74240	2.60410	HepG2	ADAR
ARID1A	ENSG00000117713.13	1059.32420	2453.34790	-1.21160	19.68820	18.40500	HepG2	AKAP1
ARID1A	ENSG00000117713.13	2940.25260	2463.86690	0.25490	3.46120	2.61470	HepG2	AKAP8L
ARID1A	ENSG00000117713.13	2750.50640	3746.41340	-0.44580	9.94440	8.77690	HepG2	AUH
ARID1A	ENSG00000117713.13	1262.91370	1743.38510	-0.46510	4.19400	3.10830	HepG2	BCLAF1
ARID1A	ENSG00000117713.13	1960.96820	2746.13240	-0.48580	7.18650	6.01950	HepG2	CALR
ARID1A	ENSG00000117713.13	1402.29490	1889.03690	-0.42990	2.12770	1.46330	HepG2	CNOT7
ARID1A	ENSG00000117713.13	3447.26510	4180.89150	-0.27840	2.09390	1.48620	HepG2	CPSF6
ARID1A	ENSG00000117713.13	2392.40800	2727.21210	-0.18900	2.44670	1.74390	HepG2	DAZAP1
ARID1A	ENSG00000117713.13	1612.46280	2092.99580	-0.37630	3.61410	2.84730	HepG2	DDX21
ARID1A	ENSG00000117713.13	1419.77040	1845.82490	-0.37860	2.61700	1.36300	HepG2	DDX27
ARID1A	ENSG00000117713.13	1492.90300	1973.04950	-0.40230	3.29060	2.45760	HepG2	DDX55
ARID1A	ENSG00000117713.13	2697.24340	2346.29820	0.20100	2.25200	1.63070	HepG2	DKC1
ARID1A	ENSG00000117713.13	3058.73200	2088.21480	0.55060	4.05680	3.23120	HepG2	EIF4B
ARID1A	ENSG00000117713.13	3492.97080	4301.58350	-0.30040	5.43180	4.63760	HepG2	ETF1
ARID1A	ENSG00000117713.13	1387.38370	1704.23650	-0.29680	2.80470	1.62840	HepG2	FAM120A
ARID1A	ENSG00000117713.13	1593.96830	1994.79970	-0.32360	2.93760	1.76250	HepG2	FASTKD2
ARID1A	ENSG00000117713.13	1299.02260	1642.12990	-0.33810	2.61400	1.37670	HepG2	FKBP4
ARID1A	ENSG00000117713.13	2868.78310	2164.23420	0.40650	3.45250	2.68490	HepG2	FXR1
ARID1A	ENSG00000117713.13	2797.79710	2007.23200	0.47900	4.19990	3.38860	HepG2	G3BP1
ARID1A	ENSG00000117713.13	2934.87020	2131.47310	0.46130	4.49260	3.34510	HepG2	G3BP2
ARID1A	ENSG00000117713.13	2398.83510	1697.68920	0.49870	5.19860	3.96780	HepG2	GEMIN5
ARID1A	ENSG00000117713.13	1967.69440	2506.48000	-0.34920	5.35080	4.12450	HepG2	HNRNPA2B1
ARID1A	ENSG00000117713.13	2654.94680	2033.46740	0.38460	3.55580	2.76990	HepG2	HNRNPK
ARID1A	ENSG00000117713.13	2160.14580	2484.22230	-0.20170	2.69640	2.03100	HepG2	HNRNPL
ARID1A	ENSG00000117713.13	2559.53250	2241.76820	0.19110	2.61860	1.62500	HepG2	KIF1C
ARID1A	ENSG00000117713.13	2640.03060	2164.99320	0.28610	1.89160	1.34400	HepG2	MAGOH
ARID1A	ENSG00000117713.13	2784.64270	2176.98290	0.35510	2.40750	1.81660	HepG2	MATR3
ARID1A	ENSG00000117713.13	2561.10320	3443.56240	-0.42710	5.51290	4.40550	HepG2	MSI2
ARID1A	ENSG00000117713.13	3155.75280	2228.15930	0.50200	4.70520	3.89210	HepG2	NCBP2
ARID1A	ENSG00000117713.13	2173.45890	2704.30830	-0.31530	3.62980	2.75590	HepG2	NOL12
ARID1A	ENSG00000117713.13	2649.53790	1983.84480	0.41730	3.46680	2.66400	HepG2	PABPC4
ARID1A	ENSG00000117713.13	2441.74610	2043.37000	0.25690	3.51760	2.85090	HepG2	PCBP1
ARID1A	ENSG00000117713.13	2159.32890	1576.83150	0.45350	6.45440	4.62370	HepG2	PKM
ARID1A	ENSG00000117713.13	2632.01040	2079.30360	0.34000	5.46840	4.75410	HepG2	PTBP1
ARID1A	ENSG00000117713.13	3201.54930	2738.45450	0.22530	2.24910	1.64150	HepG2	PUM2
ARID1A	ENSG00000117713.13	2862.44950	2497.96200	0.19640	2.55140	1.95330	HepG2	PUS1
ARID1A	ENSG00000117713.13	2948.97570	2251.72770	0.38910	5.77490	4.92030	HepG2	QKI
ARID1A	ENSG00000117713.13	2593.22760	2043.66680	0.34350	3.73450	2.95890	HepG2	RBM25
ARID1A	ENSG00000117713.13	3413.03540	2313.98370	0.56060	14.75940	13.69590	HepG2	NELFE
ARID1A	ENSG00000117713.13	3234.31700	2155.30940	0.58550	16.37030	15.07500	HepG2	RECQL
ARID1A	ENSG00000117713.13	2364.21280	3183.03050	-0.42900	5.34800	4.44040	HepG2	RPLP0
ARID1A	ENSG00000117713.13	2275.94920	1855.38900	0.29460	2.66670	2.06200	HepG2	RPS19
ARID1A	ENSG00000117713.13	4253.68210	2250.71280	0.91820	2.84980	1.47410	HepG2	SF1
ARID1A	ENSG00000117713.13	2594.11920	2164.64730	0.26100	3.68010	3.01190	HepG2	SF3B4
ARID1A	ENSG00000117713.13	2871.31490	2475.43650	0.21390	3.44250	2.67450	HepG2	SLBP
ARID1A	ENSG00000117713.13	3370.76800	4981.44250	-0.56350	3.80200	2.88050	HepG2	SNRNP70
ARID1A	ENSG00000117713.13	3048.57540	4060.66990	-0.41360	10.83940	10.02480	HepG2	SRFBP1
ARID1A	ENSG00000117713.13	2814.83880	2259.49500	0.31700	5.60750	4.99340	HepG2	SRSF1
ARID1A	ENSG00000117713.13	2930.00760	2548.98320	0.20090	2.60480	1.99310	HepG2	SRSF5
ARID1A	ENSG00000117713.13	2265.92720	1838.28150	0.30160	4.85870	4.16530	HepG2	SRSF9
ARID1A	ENSG00000117713.13	3764.23300	2898.83130	0.37680	8.62620	7.62910	HepG2	SUCLG1
ARID1A	ENSG00000117713.13	1563.13940	2131.88920	-0.44770	6.87670	6.05680	HepG2	TRIM56
ARID1A	ENSG00000117713.13	3618.56970	2522.17100	0.52070	8.44800	6.78780	HepG2	TUFM
ARID1A	ENSG00000117713.13	5563.48800	3639.74040	0.61210	8.92940	7.79320	HepG2	U2AF1
ARID1A	ENSG00000117713.13	5817.50600	2339.89850	1.31390	5.33800	3.93020	HepG2	U2AF2
ARID1A	ENSG00000117713.13	759.20370	1160.05110	-0.61160	6.41940	5.25590	HepG2	UCHL5
ARID1A	ENSG00000117713.13	3054.45720	3650.16160	-0.25700	4.28600	3.44730	HepG2	UPF1
ARID1A	ENSG00000117713.13	4017.66000	3524.08940	0.18900	2.74570	2.15060	HepG2	UTP3
ARID1A	ENSG00000117713.13	3399.97300	4014.48070	-0.23970	4.78270	4.11340	HepG2	ZNF622
ARID1A	ENSG00000117713.13	6413.32010	8554.70490	-0.41560	5.17230	4.26670	K562	AKAP8L
ARID1A	ENSG00000117713.13	8448.60970	4872.77080	0.79390	16.42680	15.15570	K562	AQR
ARID1A	ENSG00000117713.13	7114.80060	8975.96960	-0.33520	3.89170	2.79250	K562	ATP5C1
ARID1A	ENSG00000117713.13	2982.57100	3405.95940	-0.19150	2.60070	1.67330	K562	BCLAF1
ARID1A	ENSG00000117713.13	7422.90230	5713.79210	0.37740	3.20190	1.65110	K562	BUD13
ARID1A	ENSG00000117713.13	4696.89290	3338.96370	0.49220	5.86620	4.18240	K562	CCAR1
ARID1A	ENSG00000117713.13	5270.09790	6209.77320	-0.23670	2.41850	1.68080	K562	CPSF6
ARID1A	ENSG00000117713.13	2483.66660	2986.11210	-0.26580	3.76180	2.19480	K562	DDX27
ARID1A	ENSG00000117713.13	4069.15290	3333.03670	0.28780	2.10530	1.30810	K562	EFTUD2
ARID1A	ENSG00000117713.13	5079.94580	3396.24960	0.58080	3.94950	2.72310	K562	EIF3A
ARID1A	ENSG00000117713.13	5526.83660	3567.94090	0.63130	3.60920	2.41160	K562	EIF3D
ARID1A	ENSG00000117713.13	3235.58390	2284.49830	0.50200	9.82960	8.32560	K562	EIF3G
ARID1A	ENSG00000117713.13	3885.04100	3244.92610	0.25960	2.22070	1.48210	K562	EIF4A3
ARID1A	ENSG00000117713.13	3630.09260	2922.26340	0.31280	3.82770	2.43550	K562	EIF4B
ARID1A	ENSG00000117713.13	8603.57960	7552.50550	0.18790	2.46210	1.57140	K562	EIF4G2
ARID1A	ENSG00000117713.13	4470.07590	5896.45830	-0.39950	3.26080	2.33710	K562	FIP1L1
ARID1A	ENSG00000117713.13	4066.24250	3374.59220	0.26890	3.81010	3.11720	K562	FXR1
ARID1A	ENSG00000117713.13	4380.30780	6301.28110	-0.52460	8.89370	7.51680	K562	GRSF1
ARID1A	ENSG00000117713.13	3526.25030	4499.28450	-0.35160	4.18290	2.86390	K562	HNRNPA1
ARID1A	ENSG00000117713.13	5094.82310	3773.16780	0.43320	6.20210	5.34420	K562	HNRNPC
ARID1A	ENSG00000117713.13	4058.77600	3369.54330	0.26840	2.49380	1.42100	K562	HNRNPF
ARID1A	ENSG00000117713.13	3391.54450	4849.60880	-0.51590	4.57550	3.35410	K562	HNRNPM
ARID1A	ENSG00000117713.13	5390.54510	7994.78360	-0.56860	5.60810	4.49130	K562	HSPD1
ARID1A	ENSG00000117713.13	7579.73180	9078.63390	-0.26030	2.12610	1.41340	K562	KIF1C
ARID1A	ENSG00000117713.13	5190.08540	6173.56110	-0.25030	4.63900	3.61320	K562	MTPAP
ARID1A	ENSG00000117713.13	6577.14310	8260.85170	-0.32880	3.07690	1.49970	K562	NOL12
ARID1A	ENSG00000117713.13	4074.28990	3016.78350	0.43340	5.13380	3.79200	K562	PCBP2
ARID1A	ENSG00000117713.13	4493.98300	6693.19610	-0.57470	6.29700	4.97330	K562	PPIG
ARID1A	ENSG00000117713.13	4959.62810	8483.82650	-0.77450	14.05820	12.87760	K562	PUS1
ARID1A	ENSG00000117713.13	6139.69310	8266.28820	-0.42910	8.34140	7.33870	K562	RBM15
ARID1A	ENSG00000117713.13	2379.70540	3303.28500	-0.47310	4.42880	3.39200	K562	RPS19
ARID1A	ENSG00000117713.13	5524.29590	4648.26840	0.24900	2.28620	1.30880	K562	SAFB
ARID1A	ENSG00000117713.13	8295.40350	6768.30210	0.29340	4.63640	3.60320	K562	SF3A3
ARID1A	ENSG00000117713.13	2854.42620	2216.72390	0.36470	2.60560	1.77840	K562	SF3B4
ARID1A	ENSG00000117713.13	9204.02340	5002.64850	0.87950	4.70970	2.97400	K562	SNRNP200
ARID1A	ENSG00000117713.13	3920.09940	2926.13770	0.42180	4.89730	3.41480	K562	SRFBP1
ARID1A	ENSG00000117713.13	2796.80850	2356.53320	0.24700	3.11210	1.73740	K562	SSB
ARID1A	ENSG00000117713.13	4169.23700	3268.62840	0.35100	3.15740	2.40140	K562	TARDBP
ARID1A	ENSG00000117713.13	4154.05660	3153.08590	0.39770	3.31670	2.40960	K562	TIA1
ARID1A	ENSG00000117713.13	7762.72930	6471.65340	0.26230	5.53010	4.37550	K562	WDR43
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ARID1A is not available on ENCORE database.

9 RBPs can affect the splicing of ARID1A :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ARID1A	ENSG00000117713.13	chr1	+	27060598	27060764			27059166	27059283	27087346	27087587	0.05700	0.00514	0.07561	included	K562	SF3B4
SE	ARID1A	ENSG00000117713.13	chr1	+	27060598	27060764			27059166	27059283	27087346	27087587	0.07100	0.00076	0.09851	included	K562	MATR3
A3SS	ARID1A	ENSG00000117713.13	chr1	+	27099302	27099478			27099305	27099478	27098990	27099123	0.29600	0.00000	0.00172	longer	K562	EIF3G
A3SS	ARID1A	ENSG00000117713.13	chr1	+	27099302	27099478			27099305	27099478	27098990	27099123	0.22100	0.00001	0.00234	longer	K562	RBM22
A3SS	ARID1A	ENSG00000117713.13	chr1	+	27099302	27099478			27099305	27099478	27098990	27099123	0.18800	0.00015	0.02387	longer	K562	FXR1
A3SS	ARID1A	ENSG00000117713.13	chr1	+	27102067	27102198			27102078	27102198	27101470	27101711	-0.12500	0.00028	0.01948	shorter	K562	SF3B4
A3SS	ARID1A	ENSG00000117713.13	chr1	+	27099302	27099478			27099305	27099478	27098990	27099123	0.25500	0.00030	0.07497	longer	K562	DROSHA
A3SS	ARID1A	ENSG00000117713.13	chr1	+	27099806	27099987			27099836	27099987	27099363	27099478	0.06100	0.00060	0.00440	longer	K562	AQR
A3SS	ARID1A	ENSG00000117713.13	chr1	+	27099302	27099478			27099305	27099478	27098990	27099123	0.23000	0.00000	0.00043	longer	K562	PTBP1
MXE	ARID1A	ENSG00000117713.13	chr1	+	27094280	27094490	27097609	27097817	27092947	27093057	27098990	27099123	-0.06600	0.00062	0.02255	2included	K562	PPIL4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ARID1A

General Information

Functions

Localization

Domains (AlphaFold: ARID1A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ARID1A is not avaliable on ENCORE database.

75 proteins are bound to ARID1A RNA:

eCLIP assay for ARID1A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ARID1A is not available on ENCORE database.

88 RBPs can affect the gene expression of ARID1A :

The Knockdown/knockout RNA-Seq assay for ARID1A is not available on ENCORE database.

9 RBPs can affect the splicing of ARID1A :

The Knockdown/knockout RNA-Seq assay for ARID1A is not avaliable on ENCORE database.