AMT

General Information

Gene Name       : AMT
Gene ID             : ENSG00000145020.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AMT)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878AMTENSG00000145020.152.882.232.55ENCSR000AEF
HepG2AMTENSG00000145020.1546.1436.6341.39ENCSR985KAT
K562AMTENSG00000145020.150.550.350.45ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AMT is not avaliable on ENCORE database.



Proteins bound to RNA
  • AMT RNA is bound by 11 proteins.  







eCLIP assay for AMT is not avaliable on ENCORE database.





11 proteins are bound to AMT RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr34945653449456658-3'-UTR,CDS,intron-Distal,intron-Proximal4.8686916.71417HepG2BUD13
chr34945657549456673-3'-UTR,CDS,intron-Distal,intron-Proximal4.7173617.24136HepG2AQR
chr34945653649456575-3'-UTR,CDS,intron-Distal3.216614.80460HepG2AQR
chr34945471949454825-3'-UTR,CDS,intron-Distal,intron-Proximal4.301544.52184HepG2PABPN1
chr34945677349456842-3'-UTR,CDS,intron-Distal,intron-Proximal5.5914811.86816HepG2PPIG
chr34945653849456584-3'-UTR,CDS,intron-Distal3.818436.13978HepG2PPIG
chr34945447349454587-3'-UTR,intron-Distal3.899405.55663HepG2LSM11
chr34945666849456735-3'-UTR,CDS,intron-Distal,intron-Proximal3.723017.35853HepG2PRPF8
chr34945718849457233-3'-UTR,CDS,intron-Distal,intron-Proximal3.574993.39008HepG2AQR
chr34945425449454353-3'-UTR,intron-Distal4.261523.88553HepG2ZC3H11A
chr34945640449456450-3'-UTR,CDS,intron-Distal4.258645.52342HepG2PPIG
chr34945442649454492-3'-UTR,intron-Distal4.004473.35113HepG2ZC3H11A
chr34945666649456708-3'-UTR,CDS,intron-Distal,intron-Proximal3.923415.30777HepG2PPIG
chr34945670849456765-3'-UTR,CDS,intron-Distal,intron-Proximal5.832387.95724HepG2PPIG
chr34945715249457216-3'-UTR,CDS,intron-Distal,intron-Proximal3.009303.39306HepG2GRWD1
chr34945650949456587-3'-UTR,CDS,intron-Distal,intron-Proximal3.327295.28105HepG2PRPF8
chr34945717549457230-3'-UTR,CDS,intron-Distal,intron-Proximal4.127684.11693K562BUD13
chr34945717949457236-3'-UTR,CDS,intron-Distal,intron-Proximal3.916114.98250K562AQR
chr34945714149457166-3'-UTR,CDS,intron-Distal,intron-Proximal4.584689.28243HepG2PPIG
chr34945771449457772-5'-UTR,CDS,intron-Distal4.976815.86613HepG2PPIG
chr34945763249457714-5'-UTR,CDS,intron-Distal,intron-Proximal4.466168.09084HepG2PPIG
chr34945969749459777-CDS,intron-Distal,intron-Proximal3.273025.31735HepG2SF3B4
chr34945964049459786-CDS,intron-Distal,intron-Proximal3.347378.93727HepG2PRPF4
chr34945739149457483-intron-Distal,intron-Proximal5.201158.88526HepG2RBFOX2
chr34945710149457141-intron-Distal,intron-Proximal4.712335.68502HepG2PRPF8
chr34945659149456674-intron-Distal,intron-Proximal3.665535.29525HepG2RBFOX2
chr34945659549456667-intron-Distal,intron-Proximal4.888895.65342K562AQR
chr34945658749456668-intron-Distal,intron-Proximal3.8828811.40182HepG2PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AMT is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AMT is not available on ENCORE database.

  • 95 RBPs can affect the levels of AMT.  








The Knockdown/knockout RNA-Seq assay for AMT is not available on ENCORE database.





95 RBPs can affect the gene expression of AMT :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
AMTENSG00000145020.10654.361101132.90460-0.7919017.8408016.58290HepG2ACO1
AMTENSG00000145020.10821.298601706.59850-1.0551013.9917012.89160HepG2AKAP1
AMTENSG00000145020.10893.534301138.13980-0.349102.668701.91430HepG2AKAP8L
AMTENSG00000145020.10879.520601126.32150-0.356802.960501.50900HepG2ATP5C1
AMTENSG00000145020.101109.621901607.03800-0.534309.862808.69940HepG2AUH
AMTENSG00000145020.10493.91080674.22550-0.449003.187002.54990HepG2BOP1
AMTENSG00000145020.10656.02980866.18060-0.400903.290702.45840HepG2CALR
AMTENSG00000145020.10890.513701132.55320-0.346904.506103.69650HepG2CKAP4
AMTENSG00000145020.10787.08650618.954000.346602.026401.42820HepG2CPSF6
AMTENSG00000145020.101084.268201459.66210-0.428903.664602.94570HepG2CELF1
AMTENSG00000145020.101253.127301047.726100.258202.958502.09770HepG2DDX19B
AMTENSG00000145020.101858.774201044.684700.8312014.1970012.80180HepG2DDX21
AMTENSG00000145020.101171.738401634.72420-0.480403.993303.25330HepG2DDX3X
AMTENSG00000145020.10404.71910702.87490-0.796303.992502.83070HepG2DDX59
AMTENSG00000145020.10866.578501404.42200-0.696606.583705.66180HepG2DDX6
AMTENSG00000145020.101118.94940862.625400.375203.044902.02100HepG2DHX30
AMTENSG00000145020.101444.403801083.855500.414205.822704.90590HepG2DKC1
AMTENSG00000145020.10573.25740962.89340-0.748205.280203.75300HepG2AGO1
AMTENSG00000145020.10765.79180946.97820-0.306402.390501.30530HepG2EIF2S2
AMTENSG00000145020.10472.39840827.08800-0.808008.153006.67630HepG2EIF3D
AMTENSG00000145020.10943.026201452.59630-0.623304.472103.60860HepG2EIF4B
AMTENSG00000145020.101229.231601548.36660-0.333003.375102.46670HepG2EIF4G1
AMTENSG00000145020.101300.251401845.11880-0.504909.659208.64530HepG2ETF1
AMTENSG00000145020.10666.962601106.95680-0.730905.272704.12190HepG2EWSR1
AMTENSG00000145020.10900.985501260.81200-0.484803.563602.69740HepG2FIP1L1
AMTENSG00000145020.101163.421401505.36830-0.371702.638701.96290HepG2FXR1
AMTENSG00000145020.101082.686801396.32740-0.367002.414901.79180HepG2G3BP1
AMTENSG00000145020.10903.30240701.572800.364502.007601.45710HepG2GPKOW
AMTENSG00000145020.10650.889901090.90690-0.745004.483202.68410HepG2HLTF
AMTENSG00000145020.101414.06530902.940300.647008.317807.28470HepG2HNRNPA1
AMTENSG00000145020.10815.440401004.36050-0.300601.925101.33490HepG2HNRNPC
AMTENSG00000145020.101194.491801429.33350-0.258902.443101.80560HepG2HNRNPL
AMTENSG00000145020.10958.41670669.529200.517404.059503.31190HepG2HNRNPLL
AMTENSG00000145020.10709.79040869.70110-0.293102.163001.32220HepG2HNRNPM
AMTENSG00000145020.101131.948701419.29280-0.326402.061201.46930HepG2IGF2BP2
AMTENSG00000145020.10956.201101505.89480-0.655206.820405.80480HepG2MAGOH
AMTENSG00000145020.101070.926501514.28530-0.499803.831203.09860HepG2MATR3
AMTENSG00000145020.101099.734601549.92450-0.495004.093703.32760HepG2NCBP2
AMTENSG00000145020.101261.340201556.03280-0.302902.656601.90960HepG2NOL12
AMTENSG00000145020.101005.23520593.709100.759608.631307.36180HepG2NSUN2
AMTENSG00000145020.10805.42730987.56390-0.294102.716301.87530HepG2PARN
AMTENSG00000145020.101158.371901433.43570-0.307403.570802.90000HepG2PCBP1
AMTENSG00000145020.10653.210301076.87170-0.721205.159803.77240HepG2PCBP2
AMTENSG00000145020.10502.94040727.31690-0.532204.055903.10070HepG2PRPF8
AMTENSG00000145020.101154.470501458.59940-0.337403.968903.34010HepG2PTBP1
AMTENSG00000145020.101055.995001575.75580-0.577407.351106.27670HepG2PUM2
AMTENSG00000145020.101431.360801153.921400.310704.021403.30440HepG2PUS1
AMTENSG00000145020.101117.768501579.64590-0.499006.851605.93410HepG2QKI
AMTENSG00000145020.10275.537601039.07080-1.9150021.7952019.99250HepG2RAVER1
AMTENSG00000145020.101023.154101305.19340-0.351203.363602.42700HepG2RBM15
AMTENSG00000145020.101124.847301542.17280-0.455206.305905.60080HepG2RBM22
AMTENSG00000145020.101005.940201433.65030-0.511105.940004.98600HepG2RBM25
AMTENSG00000145020.10753.867401214.43850-0.687908.156406.44800HepG2RBM27
AMTENSG00000145020.101333.976901623.26030-0.283203.145102.57540HepG2NELFE
AMTENSG00000145020.10614.631401020.93130-0.732105.081203.82210HepG2RPS10
AMTENSG00000145020.10657.42880804.82980-0.291801.914101.39450HepG2RPS19
AMTENSG00000145020.10815.985301119.97600-0.456904.062303.10140HepG2RPS2
AMTENSG00000145020.10872.185601143.31500-0.390503.230902.06470HepG2RPS5
AMTENSG00000145020.10270.02710719.42830-1.4137014.7236013.16300HepG2RRP9
AMTENSG00000145020.101110.79680888.509900.322003.751403.02080HepG2SAFB2
AMTENSG00000145020.10599.553801352.98120-1.1742013.8349012.26220HepG2SF3A3
AMTENSG00000145020.10309.12330662.66720-1.1001013.5453012.10430HepG2SF3B1
AMTENSG00000145020.10810.289101518.54540-0.9062023.2677021.83630HepG2SF3B4
AMTENSG00000145020.10377.14690737.34580-0.967206.417905.21780HepG2SNRNP70
AMTENSG00000145020.10924.698901741.81860-0.9135028.5157027.34830HepG2SRFBP1
AMTENSG00000145020.101272.362401585.05100-0.317003.915303.37680HepG2SRSF1
AMTENSG00000145020.10470.27650713.13030-0.600703.709402.53340HepG2SRSF3
AMTENSG00000145020.101103.048301466.78050-0.411204.710503.93010HepG2SRSF5
AMTENSG00000145020.10770.81110926.63280-0.265602.584601.90990HepG2SRSF7
AMTENSG00000145020.10911.825301289.53910-0.500008.323407.45820HepG2SRSF9
AMTENSG00000145020.102591.735901512.295400.7771026.0212024.80580HepG2SSB
AMTENSG00000145020.10369.91380517.23500-0.483602.532201.48670HepG2STIP1
AMTENSG00000145020.10567.14400971.07340-0.775905.559403.86350HepG2SUB1
AMTENSG00000145020.101335.630301668.03570-0.320603.100502.44950HepG2SUCLG1
AMTENSG00000145020.10626.14560851.08130-0.442804.216103.06830HepG2SUPT6H
AMTENSG00000145020.101002.520701309.10320-0.384903.812602.83890HepG2TIA1
AMTENSG00000145020.101393.91220969.447500.523807.049806.31910HepG2TIAL1
AMTENSG00000145020.10814.33060978.13910-0.264402.398201.86560HepG2TRIM56
AMTENSG00000145020.10495.405701078.35720-1.1222017.2859015.66260HepG2U2AF1
AMTENSG00000145020.10714.608901158.44520-0.6970012.9493011.79510HepG2UTP3
AMTENSG00000145020.10700.404901022.00690-0.545103.261901.88050HepG2XRCC5
AMTENSG00000145020.101800.84830924.312800.9621012.6140011.08880HepG2XRN2
AMTENSG00000145020.1054.27620114.14620-1.072503.518302.10480K562APOBEC3C
AMTENSG00000145020.1054.2005023.126401.228702.414701.60570K562BOP1
AMTENSG00000145020.1058.2792024.591201.244702.848802.05470K562CPSF6
AMTENSG00000145020.1040.2727086.92280-1.109903.550602.82470K562DDX47
AMTENSG00000145020.1031.7470067.71120-1.092802.691601.43200K562EEF2
AMTENSG00000145020.1028.1421056.11900-0.995802.152701.44420K562EIF3G
AMTENSG00000145020.1053.2675025.018701.090102.098101.34820K562FMR1
AMTENSG00000145020.1021.1732098.60600-2.2194010.497809.40550K562FXR1
AMTENSG00000145020.1029.9630063.30620-1.079202.313101.76060K562HNRNPC
AMTENSG00000145020.1050.63490107.74270-1.089404.414003.34640K562MAGOH
AMTENSG00000145020.1050.54040107.51610-1.089004.416503.22570K562MATR3
AMTENSG00000145020.1052.5368095.85470-0.867502.369201.46820K562PCBP2
AMTENSG00000145020.1016.1752063.64690-1.976305.266504.23080K562PRPF8
AMTENSG00000145020.10101.2529056.759200.834902.485001.63390K562PSIP1
AMTENSG00000145020.109.35150104.68270-3.4847020.3425018.61570K562PTBP1
AMTENSG00000145020.1040.89030141.14380-1.787308.697707.23900K562PUF60
AMTENSG00000145020.10161.82050270.20230-0.739603.422402.82770K562PUS1
AMTENSG00000145020.1043.66630100.34950-1.200404.636103.51530K562RBM22
AMTENSG00000145020.1027.0281065.05270-1.267102.915701.55380K562RRP9
AMTENSG00000145020.1016.0034054.44460-1.766403.956902.06440K562SERBP1
AMTENSG00000145020.1020.0057043.89730-1.133702.055901.34680K562SYNCRIP
AMTENSG00000145020.1016.47250103.85540-2.6564013.8249012.01270K562TARDBP
AMTENSG00000145020.10146.0150075.556000.950404.469303.57930K562UPF1
AMTENSG00000145020.10106.5325064.652100.720402.199201.41930K562WDR3
AMTENSG00000145020.1023.8967072.44910-1.600204.388202.25800K562XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for AMT is not available on ENCORE database.





21 RBPs can affect the splicing of AMT :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEAMTENSG00000145020.10chr3-494552504945540649454211494551514945640349456584-0.099000.000070.00147excludedHepG2U2AF2
RIAMTENSG00000145020.10chr3-4945421049455151494542104945480049455047494551510.052000.007650.09973includedHepG2PCBP2
RIAMTENSG00000145020.10chr3-4945640349456838494564034945658449456692494568380.306000.000060.00305includedHepG2UCHL5
RIAMTENSG00000145020.10chr3-4945714249457775494571424945722149457643494577750.158000.001220.01767includedHepG2PRPF8
RIAMTENSG00000145020.10chr3-4945714249457775494571424945722149457643494577750.148000.000970.06869includedHepG2EFTUD2
RIAMTENSG00000145020.10chr3-4945714249457775494571424945722149457643494577750.178000.000000.00000includedHepG2QKI
RIAMTENSG00000145020.10chr3-494564034945683849456403494565844945669249456838-0.153000.002280.09610excludedHepG2HNRNPA1
RIAMTENSG00000145020.10chr3-4945714249457775494571424945722149457643494577750.103000.000140.00241includedHepG2TAF15
RIAMTENSG00000145020.10chr3-4945640349456838494564034945658449456692494568380.143000.008470.06805includedHepG2TAF15
RIAMTENSG00000145020.10chr3-4945714249457775494571424945722149457643494577750.094000.007390.06828includedHepG2NCBP2
RIAMTENSG00000145020.10chr3-494542104945515149454210494548004945504749455151-0.059000.000820.04498excludedHepG2HNRNPU
RIAMTENSG00000145020.10chr3-4945714249457775494571424945722149457643494577750.108000.000570.00584includedHepG2SF3B4
RIAMTENSG00000145020.10chr3-4945640349456838494564034945658449456692494568380.162000.000390.01009includedHepG2FUBP3
RIAMTENSG00000145020.10chr3-4945714249457775494571424945722149457643494577750.147000.000090.00167includedHepG2RBM22
RIAMTENSG00000145020.10chr3-4945714249457775494571424945722149457643494577750.147000.000020.00096includedHepG2SRSF9
RIAMTENSG00000145020.10chr3-4945640349456838494564034945658449456692494568380.216000.001100.01999includedHepG2SRSF9
RIAMTENSG00000145020.10chr3-4945714249457775494571424945722149457643494577750.139000.000230.00393includedHepG2HNRNPK
RIAMTENSG00000145020.10chr3-4945714249457775494571424945722149457643494577750.079000.003060.05965includedHepG2PTBP1
RIAMTENSG00000145020.10chr3-4945640349456838494564034945658449456692494568380.154000.002900.08366includedHepG2XRN2
MXEAMTENSG00000145020.10chr3-4945892449459005494595364945970449457643494577754945979349460111-0.178000.003150.056112includedHepG2SRSF1
MXEAMTENSG00000145020.10chr3-4945892449459005494595364945970449457643494577754945979349460111-0.208000.000480.021232includedHepG2TAF15
MXEAMTENSG00000145020.10chr3-49455250494554064945669249456838494549624945515149457142494572210.118000.005660.052381includedHepG2SFPQ
MXEAMTENSG00000145020.10chr3-49457142494572214945764349457775494566924945683849458924494590050.153000.000750.020761includedHepG2DDX55
MXEAMTENSG00000145020.10chr3-49455250494554064945669249456838494549624945515149457142494572210.166000.000160.004601includedHepG2HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for AMT is not avaliable on ENCORE database.