ALPK1

General Information

Gene Name       : ALPK1
Gene ID             : ENSG00000073331.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ALPK1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ALPK1ENSG00000073331.1717.0415.7016.37ENCSR000AEF
HepG2ALPK1ENSG00000073331.170.480.500.49ENCSR985KAT
K562ALPK1ENSG00000073331.174.003.123.56ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ALPK1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on ALPK1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for ALPK1 is not avaliable on ENCORE database.






NO known proteins are bound to ALPK1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for ALPK1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ALPK1 is not available on ENCORE database.

  • 100 RBPs can affect the levels of ALPK1.  








The Knockdown/knockout RNA-Seq assay for ALPK1 is not available on ENCORE database.





100 RBPs can affect the gene expression of ALPK1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ALPK1ENSG00000073331.1377.4474039.844000.958802.371701.37520HepG2AATF
ALPK1ENSG00000073331.1372.4557035.393801.033502.931702.30820HepG2ACO1
ALPK1ENSG00000073331.13252.9704046.053402.4575019.2197017.94830HepG2AKAP1
ALPK1ENSG00000073331.1374.6423035.550301.070003.092402.28660HepG2AKAP8L
ALPK1ENSG00000073331.13168.0327038.107902.1405013.6881012.06490HepG2ASCC1
ALPK1ENSG00000073331.1310.2049065.20860-2.675804.378303.64520HepG2BOP1
ALPK1ENSG00000073331.13189.4892070.330701.429807.589805.96000HepG2CCAR1
ALPK1ENSG00000073331.1381.6832036.204301.173803.223202.39140HepG2CIRBP
ALPK1ENSG00000073331.13118.3218057.004201.053503.167302.34570HepG2CNOT7
ALPK1ENSG00000073331.1383.4017043.939000.924502.446601.80490HepG2DDX21
ALPK1ENSG00000073331.13208.9618044.121202.2436016.5879015.19070HepG2DDX3X
ALPK1ENSG00000073331.1391.4858037.888001.271703.785703.07310HepG2DDX6
ALPK1ENSG00000073331.1385.5982032.026801.418204.400003.27910HepG2EIF3D
ALPK1ENSG00000073331.13102.3815039.198301.385004.197303.35980HepG2EIF4B
ALPK1ENSG00000073331.13167.2609079.261801.077305.577704.77350HepG2ETF1
ALPK1ENSG00000073331.1377.8068034.575601.170003.481602.54220HepG2EWSR1
ALPK1ENSG00000073331.1362.0180028.605701.116302.846601.66080HepG2FAM120A
ALPK1ENSG00000073331.13178.7034059.961201.575405.591204.14970HepG2FTO
ALPK1ENSG00000073331.13103.5361046.307601.160703.845902.53300HepG2FUS
ALPK1ENSG00000073331.13121.1172037.685101.684205.472204.55000HepG2G3BP1
ALPK1ENSG00000073331.1359.6534028.518501.064602.307601.49670HepG2GEMIN5
ALPK1ENSG00000073331.13137.4882040.229301.772908.976607.91030HepG2HNRNPA1
ALPK1ENSG00000073331.13116.4192047.910701.280804.717803.07820HepG2KRR1
ALPK1ENSG00000073331.1390.6611040.858201.149803.117902.45160HepG2MATR3
ALPK1ENSG00000073331.1375.1239037.764600.992102.423301.66400HepG2MSI2
ALPK1ENSG00000073331.1321.3994052.10560-1.283902.555901.71060HepG2PABPC1
ALPK1ENSG00000073331.13106.4154037.257701.514005.093604.12600HepG2PABPC4
ALPK1ENSG00000073331.1383.6458043.999000.926702.717801.87660HepG2PARN
ALPK1ENSG00000073331.1374.1781032.417901.194103.484302.82090HepG2PCBP1
ALPK1ENSG00000073331.1380.3756032.563701.303404.115603.15350HepG2PRPF8
ALPK1ENSG00000073331.1389.4554032.984401.439304.752204.07750HepG2PTBP1
ALPK1ENSG00000073331.13133.2527047.673801.482806.911006.02390HepG2PUF60
ALPK1ENSG00000073331.1392.4282050.598600.869102.571601.99500HepG2PUM1
ALPK1ENSG00000073331.13159.9275050.567401.661009.645808.43310HepG2PUM2
ALPK1ENSG00000073331.1378.3333036.049101.119603.495502.82140HepG2PUS1
ALPK1ENSG00000073331.1392.9352035.727301.379104.597003.82140HepG2QKI
ALPK1ENSG00000073331.13152.0077066.247201.198105.994705.30460HepG2RBM22
ALPK1ENSG00000073331.1381.1428036.710201.144203.079502.51500HepG2NELFE
ALPK1ENSG00000073331.1385.5497031.154601.457204.834104.04730HepG2RPS19
ALPK1ENSG00000073331.1398.4993055.868800.818002.347201.60590HepG2RPS2
ALPK1ENSG00000073331.13100.2752033.237401.593003.312301.79740HepG2SF1
ALPK1ENSG00000073331.1320.6183064.13120-1.637102.395901.73740HepG2SF3B1
ALPK1ENSG00000073331.1377.8833034.344701.181103.240402.60740HepG2SF3B4
ALPK1ENSG00000073331.1399.4143041.275401.268103.614301.78920HepG2SLTM
ALPK1ENSG00000073331.1384.7818046.162700.876902.644702.01260HepG2SMN1
ALPK1ENSG00000073331.13170.8985074.822101.191507.023206.32560HepG2SRFBP1
ALPK1ENSG00000073331.13105.8009035.846901.561305.193704.59760HepG2SRSF1
ALPK1ENSG00000073331.13131.1785029.162102.1693014.3418013.26210HepG2SRSF9
ALPK1ENSG00000073331.13121.7996048.373001.332105.112103.31880HepG2SUGP2
ALPK1ENSG00000073331.1388.4171032.216401.456405.190904.46310HepG2TAF15
ALPK1ENSG00000073331.1380.2777029.606901.439004.933703.82750HepG2TIA1
ALPK1ENSG00000073331.1392.4008043.186801.097203.634403.07770HepG2TIAL1
ALPK1ENSG00000073331.1382.6094043.582000.922502.746802.18390HepG2TRIM56
ALPK1ENSG00000073331.1391.6125039.908501.198703.505502.80320HepG2U2AF1
ALPK1ENSG00000073331.13102.4074034.545201.567703.080702.03830HepG2U2AF2
ALPK1ENSG00000073331.13125.5101029.761702.0762012.7480011.45250HepG2UPF1
ALPK1ENSG00000073331.1367.4134030.591901.139803.011501.92460HepG2UTP18
ALPK1ENSG00000073331.1316.7723046.79170-1.480203.288902.56760HepG2ZC3H8
ALPK1ENSG00000073331.13109.5688032.732401.742909.027708.18540HepG2ZNF622
ALPK1ENSG00000073331.13200.24690130.372600.619002.507301.35080K562ABCF1
ALPK1ENSG00000073331.13189.82640404.72540-1.0923012.1179011.02290K562AGGF1
ALPK1ENSG00000073331.13228.50870444.69970-0.960609.548507.41990K562AKAP8
ALPK1ENSG00000073331.13118.52890421.12720-1.8290024.3496022.05190K562AKAP8L
ALPK1ENSG00000073331.13242.68310441.84870-0.864509.200307.41060K562ATP5C1
ALPK1ENSG00000073331.13134.6260081.206600.729202.760801.80080K562BCLAF1
ALPK1ENSG00000073331.13193.0222093.028301.052905.192303.98650K562BOP1
ALPK1ENSG00000073331.13279.53320483.69490-0.791108.060806.03490K562CCDC124
ALPK1ENSG00000073331.13165.7063086.734200.933904.555102.59550K562CEBPZ
ALPK1ENSG00000073331.13255.19260140.080200.865203.688302.42970K562CNOT7
ALPK1ENSG00000073331.13192.2861098.909400.959004.980303.93420K562CPSF6
ALPK1ENSG00000073331.13337.90780474.85310-0.490903.242601.65380K562DDX19B
ALPK1ENSG00000073331.13179.8257099.696000.850904.005002.52930K562DDX21
ALPK1ENSG00000073331.1373.07730172.54720-1.239507.928506.90280K562DDX47
ALPK1ENSG00000073331.13251.88160453.21290-0.847409.319207.51720K562DKC1
ALPK1ENSG00000073331.13237.7814098.636801.2693010.497209.23440K562EIF2S2
ALPK1ENSG00000073331.1319.3274055.00020-1.508802.940501.90160K562EIF3A
ALPK1ENSG00000073331.1344.92860109.48760-1.285105.607704.49010K562EIF3G
ALPK1ENSG00000073331.13176.45510108.959200.695402.888402.05000K562EIF4A3
ALPK1ENSG00000073331.13221.25800100.650401.136306.686405.33600K562FMR1
ALPK1ENSG00000073331.13200.3855085.315701.231807.177805.62990K562FTO
ALPK1ENSG00000073331.1367.44080113.31130-0.748602.554201.96780K562FXR1
ALPK1ENSG00000073331.13225.0552094.429001.252908.178806.81040K562GPKOW
ALPK1ENSG00000073331.13204.30180131.471600.635902.615001.87890K562GRSF1
ALPK1ENSG00000073331.13221.8556078.615801.4966010.477809.37580K562HNRNPC
ALPK1ENSG00000073331.13198.15770116.214800.769804.104803.00890K562HNRNPU
ALPK1ENSG00000073331.13399.38470127.066201.6521018.8306016.89960K562HSPD1
ALPK1ENSG00000073331.13198.40580446.94910-1.171709.951208.11650K562KIF1C
ALPK1ENSG00000073331.13168.9254080.644101.066604.201103.02770K562KRR1
ALPK1ENSG00000073331.13255.43420427.81760-0.744004.893103.33670K562MAK16
ALPK1ENSG00000073331.13108.01500159.25470-0.560102.170301.36300K562MATR3
ALPK1ENSG00000073331.13237.68310500.69190-1.0749012.9639010.78400K562MBNL1
ALPK1ENSG00000073331.13191.6338092.175401.055805.558404.29050K562METAP2
ALPK1ENSG00000073331.13134.16690350.94630-1.3872010.232208.13410K562NAA15
ALPK1ENSG00000073331.13212.90390121.028800.814804.852203.90230K562NSUN2
ALPK1ENSG00000073331.13182.02370111.152000.711502.653501.84040K562PCBP3
ALPK1ENSG00000073331.13317.07770192.845100.717304.252302.51330K562PNPT1
ALPK1ENSG00000073331.13139.2231085.258100.707402.593001.82140K562POLR2G
ALPK1ENSG00000073331.1357.59400155.04870-1.428709.017807.86350K562PTBP1
ALPK1ENSG00000073331.13339.26120204.765800.728304.368403.34910K562PUF60
ALPK1ENSG00000073331.13364.57560213.400300.772605.755204.35310K562PUM2
ALPK1ENSG00000073331.13122.09140417.69950-1.7745021.2680019.78920K562PUS1
ALPK1ENSG00000073331.13107.21990406.93810-1.9242027.6079025.64950K562RBM15
ALPK1ENSG00000073331.1389.86430148.65300-0.726102.735601.90030K562RBM22
ALPK1ENSG00000073331.13147.4233089.824100.714702.256201.38850K562SF3B1
ALPK1ENSG00000073331.1371.47800128.93420-0.851103.480502.51720K562SF3B4
ALPK1ENSG00000073331.1374.49150152.00360-1.029004.725903.80640K562SRSF1
ALPK1ENSG00000073331.13168.3199088.979600.919604.708503.16290K562SRSF7
ALPK1ENSG00000073331.13242.98850124.883300.960203.593701.71780K562STIP1
ALPK1ENSG00000073331.13125.1643060.191801.056103.822402.61400K562SUPV3L1
ALPK1ENSG00000073331.1341.2191085.51510-1.052903.230302.34310K562SYNCRIP
ALPK1ENSG00000073331.13237.83080153.828600.628503.054902.31090K562TARDBP
ALPK1ENSG00000073331.13126.5126067.799400.899802.162001.34460K562TIAL1
ALPK1ENSG00000073331.13363.31170230.890300.653903.939302.25840K562UBE2L3
ALPK1ENSG00000073331.13271.48540128.329001.080908.881407.68270K562UPF1
ALPK1ENSG00000073331.13175.19050109.807700.673802.925902.02610K562WDR3
ALPK1ENSG00000073331.1368.27560114.18290-0.741902.701401.86410K562WDR43
ALPK1ENSG00000073331.13134.3716064.866701.050604.290002.66290K562XRN2
ALPK1ENSG00000073331.13315.07470148.090401.089109.586707.86720K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ALPK1 is not available on ENCORE database.





2 RBPs can affect the splicing of ALPK1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEALPK1ENSG00000073331.13chr4+1132234941132236411132185241132186251132369561132370080.091000.004780.09002includedK562AGGF1
SEALPK1ENSG00000073331.13chr4+1132234941132236411132185241132186251132369561132370080.459000.000360.01787includedK562PTBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ALPK1 is not avaliable on ENCORE database.