PTBP1

General Information

Gene Name       : PTBP1
Gene ID             : ENSG00000011304.19
Essential Gene : Yes

Functions

Localization(RBPImage: PTBP1)

Domains (AlphaFold: PTBP1)


Antibody Validation

 View validation images for all PTBP1 antibodies

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PTBP1ENSG00000011304.19112.25153.05132.65ENCSR000AEF
HepG2PTBP1ENSG00000011304.19509.73238.82374.27ENCSR985KAT
K562PTBP1ENSG00000011304.19336.13277.67306.90ENCSR000AEO

Assays

5 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
eCLIPeCLIP: 368ENCSR981WKNPTBP1K562ReleasedENCAB553IRNENCSR445FZX  
eCLIPeCLIP: 696ENCSR384KANPTBP1HepG2ReleasedENCAB553IRNENCSR438NCK  
knockdown followed by RNA-seq PTBP1-BGKLV11-K562ENCSR527IVXPTBP1K562ReleasedENCSR129RWD   shRNAKD% = 99.1,99.7
knockdown followed by RNA-seq PTBP1-BGHLV12-HepG2ENCSR064DXGPTBP1HepG2ReleasedENCSR603TCV   shRNAKD% = 99.6,99.8
knockdown followed by RNA-seq PTBP1-BGKcLV02-K562ENCSR415DJTPTBP1K562ReleasedENCSR163JUC   CRISPRKD% = 90.9,87.9






  eCLIP  
  RBP    Exp_UID    Cell_Line    ENCODE_ACCESSION    Control_ENCODE_ACCESSION    ENCODE_Antibody_ID    Antibody    Lot_num    Status    Project  
PTBP1368K562ENCSR981WKNENCSR445FZXENCAB553IRNRN011P1ReleasedENCODE3
PTBP1696HepG2ENCSR384KANENCSR438NCKENCAB553IRNRN011P1ReleasedENCODE3


  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
PTBP1ENCAB609DDA32-4800TG268402Released, ENCODE4BGHLV12-59, Released, ENCODE4BGKcLV02-7, Released, ENCODE4
PTBP1ENCAB553IRNRN011P1Released, ENCODE3Released, ENCODE3BGHLV12-59, Released, ENCODE3BGKcLV02-7, Released, ENCODE3
PTBP157246S1Submitted, ENCORE2BGHLV12-59, Submitted, ENCORE2
PTBP172669S1Submitted, ENCORE2BGHLV12-59, Submitted, ENCORE2
PTBP1ENCAB000AWJARP40421_P050QC10301Submitted, ENCORE2BGHLV12-59, Submitted, ENCORE2


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
PTBP1K562shRNAENCSR527IVXENCSR129RWDPTBP1-LV11-35,PTBP1-LV11-36Nontarget-LV11-1,nontarget-LV11-299.1,99.7ReleasedENCODE3
PTBP1HepG2shRNAENCSR064DXGENCSR603TCVPTBP1-BGHLV12-59,PTBP1-BGHLV12-60NT-BGHLV12-93,NT-BGHLV12-9499.6,99.8ReleasedENCODE3
PTBP1K562CRISPRENCSR415DJTENCSR163JUCPTBP1_BGKcLV02-7,PTBP1_BGKcLV02-8NT_BGKcLV02-1,NT_BGKcLV02-290.9,87.9ReleasedENCODE3


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  
    PTBP1: Click to RBP Image Database
  • Nuclei
  • Nucleoplasm
  • Mutually Exclusive from Nucleolus
  • Speckles
  • Cytoplasm
  • Cytosolic
  • Nuclear release mitosis












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    PTBP1Product_ID: RN011P
    Lot_ID: 1
    Source: MBLI
    Target Name: PTBP1-human    		 HepG2_MBL_RN011P_001_PTBP1.png<br>Caption: IP-Western Blot analysis of HepG2 whole cell lysate using PTBP1 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-PTBP1 antibody (lanes under 'PTBP1').
    		 PTBP1_Secondary_Western.png<br>Caption: Western blot following shRNA against PTBP1 in K562 and HepG2 whole cell lysate using PTBP1 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against PTBP1. Lanes 5-7 follow the same pattern, but in HepG2. PTBP1 protein appears as the green band, GAPDH serves as a control and appears in red.
    		 K562_MBLI_RN011P_001_PTBP1.png<br>Caption: IP-Western Blot analysis of K562 whole cell lysate using PTBP1 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-PTBP1 antibody (lanes under 'PTBP1').
    		 PTBP1_Secondary_Western.png<br>Caption: Western blot following shRNA against PTBP1 in K562 and HepG2 whole cell lysate using PTBP1 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against PTBP1. Lanes 5-7 follow the same pattern, but in HepG2. PTBP1 protein appears as the green band, GAPDH serves as a control and appears in red.
    PTBP1-K562-CRISPR.png<br>Caption: Western blot following CRISPR against PTBP1 in K562 whole cell lysate using PTBP1 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against PTBP1. PTBP1 protein appears as the green band, GAPDH serves as a control and appears in red.
    PTBP1Product_ID: 32-4800
    Lot_ID: TG268402
    Source: Thermo Fisher
    Target Name: PTBP1-human    		 PTBP1-HEPG2.png<br>Caption: Western blot following shRNA against PTBP1 in HepG2 whole cell lysate using PTBP1 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different shRNA against PTBP1. PTBP1 protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.
    		 ThermoFisher_32-4800_TG268402_PTBP1.png<br>Caption: IP-WB analysis of K562 whole cell lysate using the PTBP1 specific antibody, 32-4800. Lane 1 is 2.5% of five million whole cell lysate input. Lanes 2 and 3 are 50% of IP enrichment from five million whole cell lysate using normal IgG antibody and the PTBP1-specific antibody, 32-4800. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
    		 PTBP1-K562-CRISPR-1.png<br>Caption: Western blot following CRISPR against PTBP1 in K562 whole cell lysate using PTBP1 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against PTBP1. PTBP1 protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.
    PTBP1Product_ID: ARP40421_P050
    Lot_ID: QC10301
    Source: Aviva
    Target Name: PTBP1-human    		 PTBP1_aviva-1_WB_HeLa_Fu.png<br>Caption: Western blot analysis of lysates from HeLa cells using rabbit polyclonal to PTBP1. Expected size: ~57.2kDa
    PTBP1Product_ID: 57246S
    Lot_ID: 1
    Source: Cell Signaling Technology
    Target Name: PTBP1-human    		 PTBP1-HEPG2-57246S.png<br>Caption: Western blot following shRNA against PTBP1 in HepG2 whole cell lysate using PTBP1 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different shRNA against PTBP1. PTBP1 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.
    		 CST_57246S_1_PTBP1.png<br>Caption: IP-WB analysis of 57246S whole cell lysate using the PTBP1 specific antibody, 57246S. Lanes 1 and 2 are 2.5% of five million whole cell lysate input and 50% of IP enrichment, respectively, using a normal IgG antibody. Lane 3 is 50% of IP enrichment from five million whole cell lysate using the PTBP1-specific antibody, 57246S. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
    PTBP1Product_ID: 72669S
    Lot_ID: 1
    Source: Cell Signaling Technology
    Target Name: PTBP1-human    		 PTBP1-HEPG2-72669S.png<br>Caption: Western blot following shRNA against PTBP1 in HepG2 whole cell lysate using PTBP1 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different shRNA against PTBP1. PTBP1 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.
    		 CST_72669S_1_PTBP1.png<br>Caption: IP-WB analysis of 72669S whole cell lysate using the PTBP1 specific antibody, 72669S. Lanes 1 and 2 are 2.5% of five million whole cell lysate input and 50% of IP enrichment, respectively, using a normal IgG antibody. Lane 3 is 50% of IP enrichment from five million whole cell lysate using the PTBP1-specific antibody, 72669S. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.








    RNA Targets
    • PTBP1 protein binds to 16,114 RNA regions.  





    Proteins bound to RNA
    • PTBP1 RNA is bound by 74 proteins.  






    PTBP1 protein has 16,114 RNA targets:

    Only display 100 entries as example. Please click "View All" button to see all 16,114 entries.     

    RBP Chr Start End Strand log2(fold change) -log(p-value) Cell Line Matched Gene Matched Area
    PTBP1chr15567201455672161-5.005154.40847HepG2USP24intron-Distal
    PTBP1chr24241178142411812+4.0520822.52047HepG2EML4intron-Distal
    PTBP1chr82726255927262614+4.961843.55787K562PTK2Bintron-Distal
    PTBP1chr152531184425311900+3.592264.81278HepG2SNHG14intron-Distal
    PTBP1chr2237012234237012267+4.5960711.87454HepG2AGAP1intron-Distal
    PTBP1chr116613000266130036-3.644333.76275K562SLC29A23'-UTR,intron-Distal
    PTBP1chr3142055371142055491-5.831968.42544K562XRN1intron-Distal
    PTBP1chr175648300856483048-4.6089061.09027HepG2RNF43intron-Distal
    PTBP1chr155743137157431472+4.8148516.59938K562TCF12intron-Distal
    PTBP1chr31091529310915433+4.933527.64200HepG2SLC6A11intron-Distal
    PTBP1chr103812451538124608-5.424759.85976HepG2ZNF248intron-Distal
    PTBP1chr167433948674339594-6.0097317.07918K562AC009120.6intron-Distal
    PTBP1chr172699112026991247+6.0376310.98212K562SUPT6Hintron-Distal
    PTBP1chr204584197645842044-4.3984110.46906K562ZMYND8intron-Distal
    PTBP1chr203752496937525072+4.922534.40618K562PPP1R16Bintron-Distal
    PTBP1chr2191523293191523398+4.3171711.31780HepG2NAB1intron-Distal
    PTBP1chr63797219737972279+3.362787.95978HepG2ZFAND3intron-Distal
    PTBP1chr117016474970164799+4.343323.42734K562PPFIA1intron-Distal
    PTBP1chr418793741879434+3.618493.30286HepG2WHSC1intron-Distal
    PTBP1chr8121710102121710173-4.415873.41738HepG2SNTB1intron-Distal
    PTBP1chr127589677475896883-3.584594.19039HepG2KRR1intron-Distal
    PTBP1chr99967247999672562-4.589245.63677K562HIATL2intron-Distal
    PTBP1chr12130965721309716-4.374823.91475K562EIF4G3intron-Distal
    PTBP1chr1202413871202413938+3.978053.76275K562PPP1R12Bintron-Distal
    PTBP1chr14103929383103929459+3.486024.50771K562MARK3intron-Distal
    PTBP1chr114413637644136511+4.254323.55787K562EXT2intron-Distal
    PTBP1chr12471406471462-4.393083.92866K562KDM5Aintron-Distal
    PTBP1chr7100164393100164462+3.3138014.45674HepG2AGFG23'-UTR
    PTBP1chr1153873365387372-5.5217817.88087K562HBG2, AC104389.28, HBE1intron-Distal
    PTBP1chr11117085095117085147-4.685565.05386K562PCSK7intron-Distal
    PTBP1chr1201961705201961724+4.374823.91475K562RNPEPintron-Distal
    PTBP1chr1213307656213307747+5.7800852.29274K562RPS6KC1intron-Distal
    PTBP1chr116256761362567654-5.5683328.68274K562NXF13'-UTR,5'-UTR,intron-Distal
    PTBP1chr62020539420205471-4.887057.08067K562MBOAT1intron-Distal
    PTBP1chr213072917930729265+6.3740531.18158K562BACH1, BACH1-IT1intron-Distal
    PTBP1chrX6544472865444855+6.1978660.48105K562HEPHintron-Distal
    PTBP1chr116390121163901298-3.422343.89405HepG2MACROD1intron-Distal
    PTBP1chr7126995243126995312-4.224576.12189K562ZNF800intron-Distal
    PTBP1chr12135616321356194-3.527063.30286HepG2EIF4G3intron-Distal
    PTBP1chr633737893373813-4.714824.07628HepG2SLC22A23intron-Distal
    PTBP1chr10122636116122636207+5.467288.93487K562WDR11intron-Distal
    PTBP1chr155175133451751374-4.826014.74221HepG2DMXL2intron-Distal
    PTBP1chr1777834757783616-6.0407448.60367K562LSMD1intron-Distal
    PTBP1chr125439146154391575+5.3655110.52606K562RP11-834C11.12, HOXC9, HOXC6intron-Distal
    PTBP1chr146869791268697965+3.748373.03891HepG2RAD51Bintron-Distal
    PTBP1chr146960657469606666-4.246326.77443HepG2DCAF5intron-Distal
    PTBP1chr143546387435463935+3.447653.89405HepG2SRP54intron-Distal
    PTBP1chr1827236712723710+3.450823.62418K562SMCHD1intron-Distal
    PTBP1chr166964174669641831+5.8433210.05299K562NFAT5intron-Distal
    PTBP1chr6107846855107846992+3.083943.71789HepG2SOBPintron-Distal
    PTBP1chr172705076127050767+5.4978135.13585K562RPL23A3'-UTR,intron-Distal
    PTBP1chr1222893103222893161+4.393083.42734K562BROXintron-Distal
    PTBP1chr5875942875998-4.478053.91475K562BRD9intron-Distal
    PTBP1chr2084326228432654+3.424129.95932HepG2PLCB1intron-Distal
    PTBP1chr55915376059153834-4.567028.54919HepG2PDE4Dintron-Distal
    PTBP1chr76534469765344743+4.302167.03179HepG2VKORC1L1intron-Distal
    PTBP1chr111018197610182039-4.2482616.27379HepG2SBF2intron-Distal
    PTBP1chr55359951253599552-3.600603.76275K562ARL15intron-Distal
    PTBP1chr14102628909102628989+5.7340010.46904K562WDR20intron-Distal
    PTBP1chr7156544703156544816-5.8433211.61334K562LMBR1intron-Distal
    PTBP1chr48798062687980689+4.478053.91475K562AFF1intron-Distal
    PTBP1chr77286352472863596-3.343324.75362K562BAZ1Bintron-Distal
    PTBP1chr9133607867133607915+3.004287.34656K562ABL1intron-Distal
    PTBP1chr36160722361607293+4.772565.84045HepG2PTPRGintron-Distal
    PTBP1chr1145523229145523269+6.0972112.52551K562PEX11B3'-UTR,intron-Distal,intron-Proximal
    PTBP1chr107505502875055099-5.034556.59655K562TTC18intron-Distal
    PTBP1chr99501178895011813-7.8057248.99421K562IARSintron-Distal
    PTBP1chr7127632702127632816+3.458836.48384HepG2SND1intron-Distal
    PTBP1chr12133278070133278126+3.846534.32448K562PXMP2, RP13-672B3.2intron-Distal
    PTBP1chr146987399969874105+4.5326115.64482HepG2SLC39A9intron-Distal
    PTBP1chr161609372516093769+4.289863.42734K562ABCC1intron-Distal
    PTBP1chr185368734053687411+4.024604.67922K562CTD-2008L17.1intron-Distal
    PTBP1chr86257709162577254-4.1636123.09498HepG2ASPHintron-Distal,intron-Proximal
    PTBP1chr143570617935706244+5.083308.66996HepG2KIAA0391intron-Distal
    PTBP1chr125390963353909683-3.317083.27944K562RP11-793H13.10, ATF73'-UTR,intron-Distal
    PTBP1chr162070694820707008+4.674807.33269K562ACSM3intron-Distal
    PTBP1chr122655764626557707-3.2041210.27305HepG2ITPR2intron-Distal
    PTBP1chr191876976718769856+5.7014210.98212K562KLHL26intron-Distal
    PTBP1chr2128473453128473564-3.098593.00914HepG2WDR33intron-Distal
    PTBP1chr191427418914274288-3.204903.80761K562LPHN1CDS,intron-Distal,intron-Proximal
    PTBP1chr1272583957258526-4.833595.81225K562C1RLintron-Distal
    PTBP1chr5112227538112227606-4.343326.59655K562REEP5intron-Distal
    PTBP1chr134594346445943590+3.000403.25222HepG2TPT1-AS1intron-Distal
    PTBP1chr16216993562170018-4.893085.39854K562TM2D1intron-Distal
    PTBP1chr23961640039616470-3.175105.09956HepG2MAP4K3intron-Distal
    PTBP1chr12081253720812631-3.5167539.90392HepG2CAMK2N15'-UTR,intron-Distal
    PTBP1chr2242756394242756430+3.966073.28841HepG2NEU4intron-Distal,intron-Proximal
    PTBP1chr195132369351323750-5.6732122.12948K562KLK13'-UTR,CDS,intron-Distal,intron-Proximal
    PTBP1chr2100037314100037418-4.428283.91475K562REV1intron-Distal
    PTBP1chr2108910878108910950+3.776516.71645HepG2SULT1C2intron-Distal,intron-Proximal
    PTBP1chr163000036130000426+4.858406.08961HepG2TAOK2intron-Distal
    PTBP1chr11943019819430260-4.010163.09122HepG2UBR4intron-Distal
    PTBP1chr173114051031140596-4.540705.75812K562MYO1Dintron-Distal
    PTBP1chr5141495944141495987+4.648567.56720K562NDFIP1intron-Distal
    PTBP1chr1165083266508404+3.5577215.89541K562TIMM10Bintron-Distal
    PTBP1chr143143649731436575-4.8909035.66736HepG2STRN3intron-Distal
    PTBP1chr8102203940102204033-4.246995.63677K562ZNF706intron-Distal
    PTBP1chr194591205145912123-4.2764420.93468K562ERCC13'-UTR,intron-Distal
    PTBP1chr1176137829176137951-4.391758.75579K562RFWD2CDS,intron-Distal,intron-Proximal
    PTBP1chr2190722327190722375+6.4726815.62699K562PMS1intron-Distal,intron-Proximal




    74 proteins are bound to PTBP1 RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr19811721811760+3'-UTR4.1426110.77439HepG2AKAP1
    chr19811584811608+3'-UTR5.395256.73016HepG2SUB1
    chr19811348811415+3'-UTR3.8457518.00910K562PCBP1
    chr19811256811314+3'-UTR7.5587450.66816HepG2UPF1
    chr19811434811452+3'-UTR5.27182400.00000K562PUM2
    chr19811962812004+3'-UTR3.6877261.33693K562UPF1
    chr19812028812067+3'-UTR4.5323248.08033K562PUM2
    chr19812067812086+3'-UTR4.9575483.83672K562PUM2
    chr19812239812269+3'-UTR4.9791630.19754K562UPF1
    chr19811438811486+3'-UTR5.0127958.69129K562UPF1
    chr19812035812082+3'-UTR4.4339542.53106K562UPF1
    chr19811936811983+3'-UTR7.0800236.82126HepG2UPF1
    chr19811395811428+3'-UTR3.3653317.96964K562IGF2BP2
    chr19811225811330+3'-UTR3.202907.86141HepG2G3BP1
    chr19812089812111+3'-UTR3.658678.22414K562PABPC4
    chr19812128812139+3'-UTR3.3920269.47986K562YBX3
    chr19812036812075+3'-UTR4.8493014.66282HepG2AKAP1
    chr19811455811483+3'-UTR5.22147400.00000K562PUM2
    chr19811337811421+3'-UTR3.2562915.88703K562AKAP1
    chr19811343811414+3'-UTR3.379946.64177HepG2PCBP1
    chr19812106812137+3'-UTR4.1998011.29390HepG2AKAP1
    chr19811012811040+3'-UTR5.4013942.39513HepG2UPF1
    chr19811267811307+3'-UTR4.8764914.38866HepG2AKAP1
    chr19811529811550+3'-UTR3.8575122.82673K562UPF1
    chr19811388811434+3'-UTR3.6318153.94047K562PUM2
    chr19812035812086+3'-UTR3.2359610.80984HepG2DDX55
    chr19811575811588+3'-UTR3.731819.29824K562YBX3
    chr19811630811698+3'-UTR3.1231517.56856K562PABPC4
    chr19811170811195+3'-UTR3.211794.35063K562GEMIN5
    chr19811623811690+3'-UTR3.1318413.19251HepG2TIAL1
    chr19811453811468+3'-UTR3.558203.34359K562SND1
    chr19812121812168+3'-UTR3.059139.88760HepG2YBX3
    chr19811145811231+3'-UTR5.20161400.00000K562UPF1
    chr19811036811071+3'-UTR4.8989839.64784K562UPF1
    chr19811040811092+3'-UTR3.582549.93661HepG2STAU2
    chr19811525811561+3'-UTR3.253518.08133K562PABPC4
    chr19811071811145+3'-UTR6.1037466.27316K562UPF1
    chr19811338811418+3'-UTR3.024355.46867HepG2HNRNPK
    chr19811034811097+3'-UTR5.4668233.20865HepG2AKAP1
    chr19811383811430+3'-UTR4.2124886.76185K562UPF1
    chr19811632811683+3'-UTR5.13702400.00000K562PUM2
    chr19811330811422+3'-UTR6.19690400.00000HepG2UPF1
    chr19812086812091+3'-UTR5.2107856.61579K562PUM2
    chr19810828810862+3'-UTR3.109036.17629K562IGF2BP2
    chr19811019811034+3'-UTR4.4595516.44743HepG2AKAP1
    chr19811220811256+3'-UTR7.5187150.97333HepG2UPF1
    chr19811561811616+3'-UTR3.675125.35714K562NOLC1
    chr19811589811620+3'-UTR3.646859.93746K562YBX3
    chr19811725811772+3'-UTR3.287474.34336HepG2IGF2BP1
    chr19810883810921+3'-UTR3.007374.37610K562IGF2BP1
    chr19810927811037+3'-UTR3.8837418.87844K562RPS3
    chr19810989811012+3'-UTR4.9886323.56995HepG2UPF1
    chr19811097811142+3'-UTR4.4717121.46901HepG2AKAP1
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    chr19798741798783+intron-Distal3.857106.17535K562FASTKD2
    chr19802567802671+intron-Distal3.237174.88129K562FUS
    chr19803034803186+intron-Distal3.8616816.49246K562FUS
    chr19804702804736+intron-Distal,intron-Proximal3.396977.35853HepG2PRPF8
    chr19797632797744+intron-Distal3.227518.01066HepG2XRN2
    chr19802574802643+intron-Distal3.7318813.18776K562EWSR1
    chr19801125801153+intron-Distal3.977483.34442K562FUS
    chr19797877797929+intron-Distal3.042205.60565K562CSTF2T
    chr19800638800681+intron-Distal4.313859.91765K562NONO
    chr19810656810688+intron-Proximal3.740324.96235K562XRN2
    chr19808496808543+intron-Proximal3.204239.15882HepG2BUD13
    chr19810642810693+intron-Proximal3.849305.24441K562SMNDC1
    chr19797537797549+intron-Proximal5.8537429.02325HepG2AQR
    chr19808784808849+intron-Proximal4.5947621.68890HepG2EFTUD2
    chr19797510797541+intron-Proximal3.817976.82513HepG2PRPF8
    chr19810469810523+intron-Proximal3.789235.58951HepG2SF3B4
    chr19797509797537+intron-Proximal5.8775929.44182HepG2AQR
    chr19808305808355+intron-Proximal3.8144623.06465K562SF3B4
    chr19808509808530+intron-Proximal4.154764.24431HepG2RBFOX2
    chr19808783808838+intron-Proximal3.0160110.21719HepG2PRPF8
    chr19797535797593+intron-Proximal3.9709010.41279HepG2RBM22
    chr19797549797578+intron-Proximal3.618724.57180HepG2AQR
    chr19797540797577+intron-Proximal4.764806.44863HepG2CSTF2T
    chr19810644810691+intron-Proximal3.8262012.95109HepG2RBM22
    chr19797522797551+intron-Proximal3.4645410.82874K562AQR
    chr19808765808804+intron-Proximal3.310837.13900K562AQR
    chr19810647810682+intron-Proximal3.848728.97789HepG2EFTUD2
    chr19808795808840+intron-Proximal3.221165.29427HepG2RBM22
    chr19810656810684+intron-Proximal4.147135.29694K562EFTUD2
    chr19808301808342+intron-Proximal4.710465.80533K562SMNDC1
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    The PTBP1 protein binds to its own RNA.

    RBP Chr Start End Strand log2(fold change) -log(p-value) Cell Line Matched Gene Matched Area
    PTBP1chr19798738798805+3.292113.59395HepG2PTBP1intron-Distal


    Diffrential Expression
    • 14,871 differentially expressed genes after Knockdown/Knockout PTBP1 protein.  





    • 126 RBPs can affect the levels of PTBP1.  







    14,871 differentially expressed genes after Knockdown/Knockout PTBP1 protein :

    Only display 100 entries as example. Please click "View All" button to see all 14,871 entries.     

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    DPM1ENSG00000000419.81413.920802040.57260-0.5293010.301709.37680HepG2PTBP1
    C1orf112ENSG00000000460.12189.18490265.04730-0.486502.599202.06590HepG2PTBP1
    FUCA2ENSG00000001036.92556.152103452.34960-0.433607.285706.48100HepG2PTBP1
    NFYAENSG00000001167.101468.02410890.256500.7215015.4110014.32010HepG2PTBP1
    LAS1LENSG00000001497.12671.99960824.51770-0.295102.320301.81110HepG2PTBP1
    CYP51A1ENSG00000001630.115531.3801012518.22750-1.1783076.1928074.25220HepG2PTBP1
    RAD52ENSG00000002016.12289.35820197.446600.551302.733802.18890HepG2PTBP1
    MYH16ENSG00000002079.813.155901.586003.052102.460401.93990HepG2PTBP1
    CD99ENSG00000002586.132271.818803048.88320-0.424408.642507.78560HepG2PTBP1
    MAD1L1ENSG00000002822.11479.05760366.092200.387902.926502.36660HepG2PTBP1
    CYP26B1ENSG00000003137.414.562600.0000099999.999904.494603.83440HepG2PTBP1
    DBNDD1ENSG00000003249.91333.74460756.388500.8182011.2080010.25110HepG2PTBP1
    ALS2ENSG00000003393.101239.608001470.16120-0.246102.683802.14360HepG2PTBP1
    CFLARENSG00000003402.152457.517301968.512600.320004.747104.07280HepG2PTBP1
    TFPIENSG00000003436.1013596.0284020227.51820-0.5731022.6924021.41400HepG2PTBP1
    SLC7A2ENSG00000003989.123946.3063012751.32580-1.69210160.13730157.60700HepG2PTBP1
    ARF5ENSG00000004059.6989.456601344.86630-0.442806.493405.72420HepG2PTBP1
    POLDIP2ENSG00000004142.71985.654502741.90970-0.465605.481304.76590HepG2PTBP1
    PLXND1ENSG00000004399.82956.345201852.182800.6745013.5537012.52450HepG2PTBP1
    AK2ENSG00000004455.122186.403203933.18660-0.8471033.3677031.89520HepG2PTBP1
    FKBP4ENSG00000004478.51115.336901872.29480-0.7473018.8153017.62960HepG2PTBP1
    RECQLENSG00000004700.11710.95030566.664800.327202.137001.64420HepG2PTBP1
    NDUFAB1ENSG00000004779.51485.934202084.19910-0.488109.974109.06190HepG2PTBP1
    PDK4ENSG00000004799.722.393706.229101.845902.057501.57300HepG2PTBP1
    SLC25A13ENSG00000004864.92227.162901700.477200.389206.040505.29500HepG2PTBP1
    UPF1ENSG00000005007.82262.622302631.87830-0.218102.449901.93000HepG2PTBP1
    SKAP2ENSG00000005020.8826.37370566.182100.545407.054906.26290HepG2PTBP1
    SLC25A5ENSG00000005022.53944.1439010022.97570-1.3455036.3579034.83250HepG2PTBP1
    POLR2JENSG00000005075.11408.24610720.39280-0.8193012.5067011.50930HepG2PTBP1
    DHX33ENSG00000005100.81238.17940907.128000.448705.994005.25130HepG2PTBP1
    LIG3ENSG00000005156.7550.95890791.97000-0.523505.408604.69790HepG2PTBP1
    ACSM3ENSG00000005187.71071.763601659.35570-0.6306013.5593012.53000HepG2PTBP1
    AC004381.6ENSG00000005189.15587.89570251.255801.2263019.3802018.17880HepG2PTBP1
    SPPL2BENSG00000005206.12611.99360406.730900.589306.192405.43720HepG2PTBP1
    FAM214BENSG00000005238.15468.07400184.436801.343508.527607.67660HepG2PTBP1
    CREBBPENSG00000005339.81936.580801516.914100.352304.349403.69700HepG2PTBP1
    MPOENSG00000005381.68.060300.574603.810001.795701.33600HepG2PTBP1
    GCFC2ENSG00000005436.9586.84250823.50630-0.488805.159204.46060HepG2PTBP1
    WDR54ENSG00000005448.12124.24920209.23830-0.751903.082702.51080HepG2PTBP1
    CROTENSG00000005469.7421.31180285.159800.563003.124602.55030HepG2PTBP1
    ABCB4ENSG00000005471.11838.749401121.74490-0.419405.165604.46640HepG2PTBP1
    KMT2EENSG00000005483.152054.886001664.297900.304003.453302.85680HepG2PTBP1
    RHBDD2ENSG00000005486.121398.53410850.284500.7178015.2005014.11730HepG2PTBP1
    ZNF195ENSG00000005801.12724.29880375.746200.946707.318206.51170HepG2PTBP1
    MYCBP2ENSG00000005810.131497.156601028.607200.541409.147108.26840HepG2PTBP1
    FBXL3ENSG00000005812.6464.56810647.13740-0.478204.431403.77410HepG2PTBP1
    ITGALENSG00000005844.13101.19960246.08420-1.2819010.238809.31610HepG2PTBP1
    ITGA3ENSG00000005884.13618.9324015.354405.33300137.46540135.11730HepG2PTBP1
    ZFXENSG00000005889.11673.923201700.61490-1.3354050.1637048.46520HepG2PTBP1
    LAMP2ENSG00000005893.113346.949305841.36160-0.8035034.3735032.88350HepG2PTBP1
    ITGA2BENSG00000005961.1315.7402045.30470-1.525203.162902.58580HepG2PTBP1
    ASB4ENSG00000005981.8832.2421035.282904.55990156.27960153.77890HepG2PTBP1
    GDE1ENSG00000006007.74044.341502378.782900.7656026.9230025.55930HepG2PTBP1
    CRLF1ENSG00000006016.64270.375503445.914900.309403.905903.28090HepG2PTBP1
    OSBPL7ENSG00000006025.7318.91500126.076201.3388014.5670013.50360HepG2PTBP1
    TMEM98ENSG00000006042.71674.575502676.92930-0.6768010.004609.09080HepG2PTBP1
    SYNRGENSG00000006114.11956.31830764.754900.322403.063102.49300HepG2PTBP1
    TMEM132AENSG00000006118.10947.89960765.835400.307602.790802.24130HepG2PTBP1
    CX3CL1ENSG00000006210.62859.929003696.38900-0.370107.128906.33140HepG2PTBP1
    SPATA20ENSG00000006282.152765.807101343.326601.0418042.4553040.85120HepG2PTBP1
    TNFRSF12AENSG00000006327.9978.44140537.680100.8636017.0684015.93220HepG2PTBP1
    MAP3K9ENSG00000006432.111002.56610430.360001.2200029.2366027.83050HepG2PTBP1
    BAIAP2L1ENSG00000006453.9943.16240740.781100.348403.707903.09490HepG2PTBP1
    ETV1ENSG00000006468.929.844501.586004.233906.604605.83100HepG2PTBP1
    ALDH3B1ENSG00000006534.11210.09880141.936300.565702.792502.24280HepG2PTBP1
    GGCTENSG00000006625.13398.90340516.99280-0.374102.676702.13720HepG2PTBP1
    IFRD1ENSG00000006652.9690.58990855.89290-0.309602.739802.19440HepG2PTBP1
    COX10ENSG00000006695.6392.01580481.96280-0.298001.835201.37190HepG2PTBP1
    ELAC2ENSG00000006744.141068.01140726.989600.554808.064207.22950HepG2PTBP1
    ARSDENSG00000006756.11744.40560385.193300.9504012.5434011.54500HepG2PTBP1
    PNPLA4ENSG00000006757.7223.66670358.04710-0.678805.547604.82830HepG2PTBP1
    ADIPOR2ENSG00000006831.92996.885506344.01260-1.0819055.3222053.56700HepG2PTBP1
    CDKL3ENSG00000006837.731.9339057.44110-0.847001.973501.49740HepG2PTBP1
    UPP2ENSG00000007001.855.124902.321504.5694010.423209.49230HepG2PTBP1
    MARK4ENSG00000007047.10622.652901099.90880-0.820906.605705.83200HepG2PTBP1
    PROM1ENSG00000007062.71258.25940605.786401.0544027.3863026.01130HepG2PTBP1
    CCDC124ENSG00000007080.6349.62990258.887300.433401.880501.41240HepG2PTBP1
    PAFAH1B1ENSG00000007168.82760.197102154.328500.357406.138805.38660HepG2PTBP1
    KIAA0100ENSG00000007202.104304.876703504.528000.296705.123004.42640HepG2PTBP1
    PAX6ENSG00000007372.1695.623800.436707.7744027.2082025.83780HepG2PTBP1
    RPUSD1ENSG00000007376.3245.86780170.668300.526602.409101.89270HepG2PTBP1
    RHBDF1ENSG00000007384.11347.99390115.502801.5910019.9692018.75500HepG2PTBP1
    BAIAP3ENSG00000007516.9243.86120136.304800.839105.713604.98470HepG2PTBP1
    PIGQENSG00000007541.10452.24120293.365600.624305.220404.51770HepG2PTBP1
    DNAJC11ENSG00000007923.111607.747801308.641300.296903.783503.16600HepG2PTBP1
    MYLIPENSG00000007944.10150.8633098.562400.614002.439801.92060HepG2PTBP1
    E2F2ENSG00000007968.6216.63280119.433300.858904.624203.95710HepG2PTBP1
    PSMB1ENSG00000008018.82866.365604922.67260-0.7802028.9855027.58400HepG2PTBP1
    CDKL5ENSG00000008086.6119.9875054.384001.141504.572203.90770HepG2PTBP1
    CDK11AENSG00000008128.18603.48970413.856400.544105.671304.94420HepG2PTBP1
    NADKENSG00000008130.111544.121301856.45760-0.265803.195502.61550HepG2PTBP1
    CYTH3ENSG00000008256.11296.55290136.787501.116309.998609.08510HepG2PTBP1
    ADAM22ENSG00000008277.10291.19650221.558500.394201.994001.51600HepG2PTBP1
    SYPL1ENSG00000008282.31369.491701996.41730-0.5438010.186509.26490HepG2PTBP1
    SPAG9ENSG00000008294.163079.426604904.37620-0.6714022.4830021.20930HepG2PTBP1
    CELSR3ENSG00000008300.101075.87910755.813700.509307.178706.37820HepG2PTBP1
    AASSENSG00000008311.10622.26280489.364100.346502.412901.89600HepG2PTBP1
    PLEKHG6ENSG00000008323.11282.06350743.56210-1.3984030.8443029.41210HepG2PTBP1
    MPNDENSG00000008382.11200.43910331.86660-0.727405.503004.78620HepG2PTBP1
    MGST1ENSG00000008394.81659.169302530.97120-0.6092015.0490013.97070HepG2PTBP1
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    126 RBPs can affect the gene expression of PTBP1 :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    PTBP1ENSG00000011304.122012.390803258.12310-0.695105.064303.65700HepG2AATF
    PTBP1ENSG00000011304.126033.218607364.76010-0.287702.427201.54550HepG2ABCF1
    PTBP1ENSG00000011304.124324.853206283.80410-0.5390019.5138018.21800HepG2ACO1
    PTBP1ENSG00000011304.123728.031906007.72230-0.688406.181105.42190HepG2AKAP1
    PTBP1ENSG00000011304.124224.019006313.07610-0.5797018.5837016.84540HepG2AKAP8L
    PTBP1ENSG00000011304.123590.266804970.54330-0.469303.561002.67260HepG2ASCC1
    PTBP1ENSG00000011304.125830.865508536.20830-0.549907.568506.52430HepG2AUH
    PTBP1ENSG00000011304.122373.546403632.80730-0.614005.400204.18390HepG2BCLAF1
    PTBP1ENSG00000011304.123227.581805439.40050-0.7530014.4661013.24820HepG2BOP1
    PTBP1ENSG00000011304.124626.476705516.41160-0.253802.652701.44990HepG2BUD13
    PTBP1ENSG00000011304.122592.540104543.93560-0.8096018.4308016.76610HepG2CALR
    PTBP1ENSG00000011304.125596.187108080.21560-0.529902.655701.70450HepG2CCAR1
    PTBP1ENSG00000011304.124819.957406282.13660-0.3822011.8788010.69600HepG2CKAP4
    PTBP1ENSG00000011304.123056.254604993.53490-0.7083011.7639010.45730HepG2CPSF6
    PTBP1ENSG00000011304.122106.244403337.63310-0.664203.624301.98490HepG2CSTF2T
    PTBP1ENSG00000011304.124332.403005458.93840-0.333505.953705.07780HepG2CELF1
    PTBP1ENSG00000011304.124602.463405811.47980-0.336508.286906.97990HepG2DDX19B
    PTBP1ENSG00000011304.122204.752303590.71870-0.703707.275206.22810HepG2DDX21
    PTBP1ENSG00000011304.122529.752703517.09330-0.475403.252802.26020HepG2DDX24
    PTBP1ENSG00000011304.123639.469105754.20830-0.660906.070305.17810HepG2DDX3X
    PTBP1ENSG00000011304.122899.148304111.52050-0.504002.858302.07330HepG2DDX55
    PTBP1ENSG00000011304.123779.537605670.56900-0.585303.341602.26870HepG2DDX59
    PTBP1ENSG00000011304.124773.409306204.55060-0.378303.756702.58700HepG2DDX5
    PTBP1ENSG00000011304.124750.580006011.81960-0.339707.085506.09760HepG2DKC1
    PTBP1ENSG00000011304.122108.237903309.30960-0.650503.800902.49190HepG2AGO1
    PTBP1ENSG00000011304.123797.451804751.75650-0.323401.980501.46910HepG2EIF2S1
    PTBP1ENSG00000011304.124284.772705790.82990-0.4346010.639609.20310HepG2EIF4G1
    PTBP1ENSG00000011304.124140.811905547.25860-0.421904.719803.67370HepG2EIF4G2
    PTBP1ENSG00000011304.126696.542409801.43620-0.549608.724607.75890HepG2ETF1
    PTBP1ENSG00000011304.124985.020906140.13140-0.300703.308602.39590HepG2EWSR1
    PTBP1ENSG00000011304.124969.493307436.26410-0.581506.713505.56860HepG2FIP1L1
    PTBP1ENSG00000011304.122342.759803421.88080-0.546603.832402.35050HepG2FKBP4
    PTBP1ENSG00000011304.123313.588605002.36660-0.594202.364401.43200HepG2FTO
    PTBP1ENSG00000011304.126822.078805299.966900.364103.164302.42510HepG2FXR1
    PTBP1ENSG00000011304.123693.150404915.17350-0.412403.049202.35230HepG2G3BP1
    PTBP1ENSG00000011304.123596.707105660.20170-0.654208.158107.10010HepG2GPKOW
    PTBP1ENSG00000011304.125035.525205999.05100-0.252604.157302.97540HepG2HDGF
    PTBP1ENSG00000011304.124170.180105394.46160-0.371407.938406.50190HepG2HNRNPA2B1
    PTBP1ENSG00000011304.126550.554004980.147200.395303.095302.35800HepG2HNRNPK
    PTBP1ENSG00000011304.123327.322905401.66720-0.6990010.831809.68670HepG2HNRNPLL
    PTBP1ENSG00000011304.122783.033903686.00980-0.405408.794007.75890HepG2HNRNPU
    PTBP1ENSG00000011304.126784.189005301.828500.355602.916302.24310HepG2MAGOH
    PTBP1ENSG00000011304.123724.177905331.09310-0.517503.821503.08970HepG2MATR3
    PTBP1ENSG00000011304.122486.775603709.64700-0.577003.394802.23260HepG2METAP2
    PTBP1ENSG00000011304.123994.067106016.77020-0.5911011.492709.96210HepG2MSI2
    PTBP1ENSG00000011304.124250.851105456.33770-0.360202.403001.81000HepG2NCBP2
    PTBP1ENSG00000011304.123513.563702254.808700.639804.558402.73550HepG2NOLC1
    PTBP1ENSG00000011304.123796.882904789.87180-0.335203.222702.41780HepG2NSUN2
    PTBP1ENSG00000011304.123711.608104857.69670-0.388202.427701.74740HepG2PABPC4
    PTBP1ENSG00000011304.124543.711903287.613900.466709.511008.18790HepG2PPIL4
    PTBP1ENSG00000011304.124004.509705766.21080-0.5260015.1929013.60870HepG2PRPF4
    PTBP1ENSG00000011304.122239.328903170.17650-0.501503.124702.27130HepG2PRPF8
    PTBP1ENSG00000011304.121759.405804925.66060-1.4852097.9285095.84580HepG2PTBP1
    PTBP1ENSG00000011304.123420.793105556.12010-0.6997014.0943012.88960HepG2PUF60
    PTBP1ENSG00000011304.124333.480306400.41790-0.5626021.3641019.94820HepG2PUS1
    PTBP1ENSG00000011304.124446.381305334.35710-0.262703.092502.43910HepG2QKI
    PTBP1ENSG00000011304.126499.521508279.89640-0.349305.005503.89480HepG2RBM15
    PTBP1ENSG00000011304.125499.634908192.03540-0.574909.845009.00420HepG2RBM22
    PTBP1ENSG00000011304.124110.807904841.36830-0.236002.064401.47640HepG2RBM25
    PTBP1ENSG00000011304.126077.893605105.627600.251404.429703.67290HepG2RECQL
    PTBP1ENSG00000011304.123671.883805528.84040-0.590509.404408.26640HepG2RPLP0
    PTBP1ENSG00000011304.121739.313403135.81060-0.850309.201007.88540HepG2RRP9
    PTBP1ENSG00000011304.123996.705603282.513300.283905.617104.75190HepG2SAFB2
    PTBP1ENSG00000011304.122362.305103461.61210-0.551202.912001.94640HepG2SERBP1
    PTBP1ENSG00000011304.123781.705605346.37610-0.499506.642605.58830HepG2SF3B1
    PTBP1ENSG00000011304.126451.073905327.391100.276006.638805.62620HepG2SLBP
    PTBP1ENSG00000011304.123060.478805948.85530-0.9589010.139408.64740HepG2SNRNP70
    PTBP1ENSG00000011304.126214.419409252.33460-0.574209.635508.85530HepG2SRFBP1
    PTBP1ENSG00000011304.123750.063905352.64480-0.5133016.3363015.39160HepG2SRSF1
    PTBP1ENSG00000011304.123580.609405753.30880-0.684207.314405.62270HepG2SRSF3
    PTBP1ENSG00000011304.123216.499504354.73710-0.4371011.2001010.22100HepG2SRSF9
    PTBP1ENSG00000011304.125268.554708032.74920-0.6085011.2643010.36530HepG2SSB
    PTBP1ENSG00000011304.122348.702004092.51180-0.801107.249306.23730HepG2SUPV3L1
    PTBP1ENSG00000011304.123389.316804811.40880-0.5055010.737709.74840HepG2TAF15
    PTBP1ENSG00000011304.123616.928305265.90550-0.541907.600106.47530HepG2TARDBP
    PTBP1ENSG00000011304.122445.679603581.38390-0.5503010.498509.63370HepG2TIAL1
    PTBP1ENSG00000011304.124150.321603613.681600.199702.704202.14450HepG2TRIM56
    PTBP1ENSG00000011304.126657.924305428.044700.294503.316002.35320HepG2TUFM
    PTBP1ENSG00000011304.128435.578806360.297600.407304.243903.47470HepG2U2AF1
    PTBP1ENSG00000011304.125805.770403339.932800.797602.331301.43370HepG2U2AF2
    PTBP1ENSG00000011304.121641.271602417.26960-0.558604.258003.31600HepG2UCHL5
    PTBP1ENSG00000011304.124524.349406638.28490-0.5531013.7271012.39710HepG2UPF1
    PTBP1ENSG00000011304.122890.416203746.31890-0.374202.598101.62620HepG2UPF2
    PTBP1ENSG00000011304.125673.324506823.11180-0.266204.261402.99370HepG2UTP18
    PTBP1ENSG00000011304.123306.002505690.53590-0.7835042.5752040.59740HepG2ZC3H8
    PTBP1ENSG00000011304.124686.942907300.82060-0.6394021.6949020.52060HepG2ZNF622
    PTBP1ENSG00000011304.127235.714005685.097800.347903.929202.49200K562AARS
    PTBP1ENSG00000011304.128676.8343011017.63850-0.344603.525602.12990K562ABCF1
    PTBP1ENSG00000011304.1217435.2656010975.314900.6676027.6996026.00750K562AGGF1
    PTBP1ENSG00000011304.1215124.9442012060.798100.326503.759002.57460K562AKAP8
    PTBP1ENSG00000011304.1215265.3784011420.456900.418504.512003.67010K562AKAP8L
    PTBP1ENSG00000011304.129335.3411012287.91010-0.396503.695103.03670K562AQR
    PTBP1ENSG00000011304.124793.554206325.46970-0.400104.161103.08470K562BOP1
    PTBP1ENSG00000011304.126880.271508297.32490-0.270202.918301.36940K562CEBPZ
    PTBP1ENSG00000011304.124987.579106725.68530-0.431306.806105.56790K562CPSF6
    PTBP1ENSG00000011304.1214381.2410017970.95780-0.321505.357003.99520K562CELF1
    PTBP1ENSG00000011304.125947.694807073.04710-0.250002.399301.43200K562DDX3X
    PTBP1ENSG00000011304.127386.566305254.942300.491103.168001.79190K562EEF2
    PTBP1ENSG00000011304.126702.352907769.26380-0.213102.895901.65420K562EIF2S1
    PTBP1ENSG00000011304.124960.985003673.026100.433607.644406.32840K562EIF3G
    PTBP1ENSG00000011304.127653.579906450.431700.246603.394001.93340K562EWSR1
    PTBP1ENSG00000011304.124106.573405402.35930-0.395703.107701.90050K562FKBP4
    PTBP1ENSG00000011304.124763.022606843.42640-0.522807.108805.70640K562FMR1
    PTBP1ENSG00000011304.124213.738005800.50850-0.461104.725903.50070K562FTO
    PTBP1ENSG00000011304.121549.478403695.97320-1.254209.278907.83160K562G3BP2
    PTBP1ENSG00000011304.129039.4549010673.68820-0.239803.179401.95500K562GLRX3
    PTBP1ENSG00000011304.125067.236006421.29120-0.341703.745702.82730K562GPKOW
    PTBP1ENSG00000011304.129383.5621012958.42110-0.465707.642306.37280K562GRSF1
    PTBP1ENSG00000011304.127692.170409238.17930-0.264202.268801.30120K562HNRNPA1
    PTBP1ENSG00000011304.124252.884606218.11060-0.548009.852108.78180K562HNRNPC
    PTBP1ENSG00000011304.127505.4066010737.71590-0.516707.174705.90680K562HSPD1
    PTBP1ENSG00000011304.128268.572405432.205100.606003.521502.31180K562IGF2BP2
    PTBP1ENSG00000011304.126773.252705524.636900.293902.752301.56530K562IGF2BP3
    PTBP1ENSG00000011304.1215133.8143012119.453800.320402.594601.79820K562KIF1C
    PTBP1ENSG00000011304.123358.831105483.19980-0.707107.437705.82420K562KRR1
    PTBP1ENSG00000011304.126922.892505547.155300.319503.685201.84980K562LSM11
    PTBP1ENSG00000011304.127518.495005707.422700.397505.094903.94820K562MAGOH
    PTBP1ENSG00000011304.1216248.5812013576.920000.259103.063402.09750K562MBNL1
    PTBP1ENSG00000011304.1211835.8978015576.51420-0.396205.221503.67810K562MSI2
    PTBP1ENSG00000011304.128589.9364011221.99820-0.3856011.082809.58200K562MTPAP
    PTBP1ENSG00000011304.1210543.4120012468.60910-0.242008.451607.24880K562NSUN2
    PTBP1ENSG00000011304.1212053.539206616.887800.865104.114202.84610K562PABPN1
    PTBP1ENSG00000011304.127258.274005579.749400.379305.321203.38090K562PCBP1
    PTBP1ENSG00000011304.125304.912509714.57320-0.8728012.2409010.49970K562PCBP3
    PTBP1ENSG00000011304.124294.522007451.22730-0.7950018.0695016.12530K562POLR2G
    PTBP1ENSG00000011304.121931.355005545.23910-1.5216064.2107061.11530K562PTBP1
    PTBP1ENSG00000011304.1211513.0530015944.48480-0.469806.324205.09210K562PUF60
    PTBP1ENSG00000011304.1213597.7126016961.49390-0.318905.211103.71280K562PUM1
    PTBP1ENSG00000011304.1218609.3896011324.929400.7164012.4967011.38760K562PUS1
    PTBP1ENSG00000011304.1216509.4803011035.291300.581109.557108.47860K562RBM15
    PTBP1ENSG00000011304.126887.046805316.341900.373404.036403.00170K562RBM22
    PTBP1ENSG00000011304.127022.903505183.092700.438203.710702.02250K562RBM34
    PTBP1ENSG00000011304.126008.202705088.411700.239602.289801.39200K562RCC2
    PTBP1ENSG00000011304.129506.502706050.148300.651802.627701.47000K562SF1
    PTBP1ENSG00000011304.1210003.0699012303.39260-0.298605.444604.32860K562SF3A3
    PTBP1ENSG00000011304.124336.973706107.17860-0.493804.894403.57590K562SF3B1
    PTBP1ENSG00000011304.122505.746903372.81910-0.428704.086702.04800K562SND1
    PTBP1ENSG00000011304.125820.125704823.523700.270902.490601.52860K562SRFBP1
    PTBP1ENSG00000011304.125887.401104646.985100.341204.175402.84170K562SRSF4
    PTBP1ENSG00000011304.126487.398005134.683900.337303.247702.09330K562SRSF5
    PTBP1ENSG00000011304.127003.328108509.38520-0.281003.639502.28540K562SRSF7
    PTBP1ENSG00000011304.128361.2075010391.41570-0.313602.973101.55930K562SSRP1
    PTBP1ENSG00000011304.127202.136509504.23030-0.400103.796502.29240K562STAU1
    PTBP1ENSG00000011304.122181.479003627.76980-0.733802.997101.45290K562TAF15
    PTBP1ENSG00000011304.127776.852505501.565200.499206.130105.04440K562TARDBP
    PTBP1ENSG00000011304.127825.591005306.983300.5602010.758809.02530K562TIA1
    PTBP1ENSG00000011304.127491.436005208.651600.524204.217902.82140K562TRA2A
    PTBP1ENSG00000011304.1210672.4577013220.73370-0.308907.571706.45600K562UPF1
    PTBP1ENSG00000011304.127826.1068010106.99570-0.369002.949401.70430K562UTP3
    PTBP1ENSG00000011304.128585.1436011312.55930-0.398005.789404.49970K562WDR3
    PTBP1ENSG00000011304.1210979.4038013842.91920-0.334303.713102.68650K562ZC3H8
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    3,016 alternative splicing events after Knockdown/Knockout PTBP1 protein :

    Only display 100 entries as example. Please click "View All" button to see all 3,016 entries.     

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SESNRNP70ENSG00000104852.10chr19+4960537049606844496046464960472849607890496079920.058000.002240.09481includedHepG2PTBP1
    SETTYH3ENSG00000136295.10chr7+2687592268768826870512687272268920026892730.129000.000020.00183includedHepG2PTBP1
    SEPPP6R2ENSG00000100239.11chr22+5087541650875497508747955087488150875934508760320.169000.000870.04601includedHepG2PTBP1
    SECFBENSG00000243649.4chr6+3189573131895941318954743189557531901386319015600.088000.000000.00000includedHepG2PTBP1
    SEMRPS18CENSG00000163319.6chr4+8437949884379582843780618437811184380892843809500.289000.000000.00000includedHepG2PTBP1
    SEFAT1ENSG00000083857.9chr4-1875388611875429291875381581875383551875493071875495180.091000.001110.05576includedHepG2PTBP1
    SEDLG1ENSG00000075711.16chr3-1968885101968886091968766131968766671969212951969214600.287000.000150.01125includedHepG2PTBP1
    SENEK3ENSG00000136098.12chr13-5271515552715206527109355271103852718050527181220.210000.001280.06217includedHepG2PTBP1
    SEADD1ENSG00000087274.12chr4+2928368292840229277402927839292989729317890.095000.000000.00004includedHepG2PTBP1
    SEADD1ENSG00000087274.12chr4+2911065291115829102412910331291661029167670.057000.000010.00095includedHepG2PTBP1
    SESAR1BENSG00000152700.9chr5-1339677661339678851339596511339597271339684171339684640.130000.000280.01879includedHepG2PTBP1
    SESAE1ENSG00000142230.7chr19+4770836047708386477069274770699747712415477138860.059000.001640.07512includedHepG2PTBP1
    SEMAN2A2ENSG00000196547.10chr15+9145981591459890914593529145948691461423914616180.157000.000400.02477includedHepG2PTBP1
    SESTPG1ENSG00000001460.13chr1-2471841324718557247180502471816924727808247279460.316000.001220.05992includedHepG2PTBP1
    SEINSRENSG00000171105.9chr19-7150507715054371428267143101715273671529380.357000.001010.05149includedHepG2PTBP1
    SESTARD4ENSG00000164211.8chr5-1108376591108377861108366851108368141108420271108420770.131000.000050.00472includedHepG2PTBP1
    SEACSL4ENSG00000068366.15chrX-1089342311089343601089263641089266011089393721089394250.500000.000000.00000includedHepG2PTBP1
    SEDHRS4ENSG00000157326.14chr14+2443549124435626244291102442921224436419244364750.184000.000080.00652includedHepG2PTBP1
    SEROBO1ENSG00000169855.15chr3-7869677878696805786952977869534078700881787010790.344000.000000.00000includedHepG2PTBP1
    SEZFAS1ENSG00000177410.8chr20+4789743947897501478970214789710747905581479057970.383000.000000.00000includedHepG2PTBP1
    SEPKP4ENSG00000144283.17chr2+1595332501595333791595303941595305121595350921595351660.417000.000000.00000includedHepG2PTBP1
    SEFKBP14ENSG00000106080.6chr7-3005982830059920300586113005873930062280300624320.251000.000000.00000includedHepG2PTBP1
    SES100A16ENSG00000188643.6chr1-1535813741535815061535804741535806531535816531535818130.181000.000000.00050includedHepG2PTBP1
    SEPNPOENSG00000108439.5chr17+4602292446022978460219814602208146023226460233550.060000.000510.03005includedHepG2PTBP1
    SEPPFIBP2ENSG00000166387.7chr11+7662263766231476609627661101766270976628510.123000.000470.02872includedHepG2PTBP1
    SESYT7ENSG00000011347.5chr11-6131464861314780613004606130059661318855613189350.395000.001490.06928includedHepG2PTBP1
    SEPPIP5K2ENSG00000145725.15chr5+1025220201025221401025203721025204451025265421025266830.238000.000600.03404includedHepG2PTBP1
    SEANO6ENSG00000177119.11chr12+4566424445664307456098674561017445695796456958760.141000.000020.00161includedHepG2PTBP1
    SEPLOD2ENSG00000152952.7chr3-1457956481457957111457945681457946821457969021457970440.336000.000000.00000includedHepG2PTBP1
    SEARHGEF11ENSG00000132694.14chr1-1569414881569416081569397891569398351569467741569468460.461000.000080.00652includedHepG2PTBP1
    SEARHGEF11ENSG00000132694.14chr1-1569082091569083051569070401569072881569093391569097020.535000.000000.00000includedHepG2PTBP1
    SEAGRNENSG00000188157.9chr1+9864119864749861059862179866329867490.208000.000000.00000includedHepG2PTBP1
    SEALDOAENSG00000149925.12chr16+3007719630077248300757443007582630078554300786870.120000.000000.00005includedHepG2PTBP1
    SECSF3RENSG00000119535.13chr1-3694320536943278369409773694127436945033369451170.118000.000400.02484includedHepG2PTBP1
    SEPLD1ENSG00000075651.11chr3-1714044741714045881713953551713954841714051601714053740.069000.000340.02176includedHepG2PTBP1
    SETPM1ENSG00000140416.15chr15+6335391163353987633532346335347263354413633544760.548000.000000.00000includedHepG2PTBP1
    SELRCH3ENSG00000186001.8chr3+1975857041975857761975812621975813161975922931975923420.470000.000320.02095includedHepG2PTBP1
    SEELL2ENSG00000118985.10chr5-9526836795268417952551279525524995278705952787530.061000.000030.00280includedHepG2PTBP1
    SEPQLC1ENSG00000122490.14chr18-7770951877709655777033287770346277710723777110250.070000.000350.02226includedHepG2PTBP1
    SEPABPC1LENSG00000101104.8chr20+4355274743552897435502514355037243559158435593670.075000.002210.09426includedHepG2PTBP1
    SECYTH1ENSG00000108669.12chr17-7669208876692091766884987668857576694350766944620.229000.000000.00009includedHepG2PTBP1
    SETCF7L2ENSG00000148737.11chr10+1148491581148492991147997831147998851149009421149010750.123000.000640.03595includedHepG2PTBP1
    SETBC1D14ENSG00000132405.14chr4+7009250700935270083587008453701160370116750.063000.000090.00756includedHepG2PTBP1
    SESREK1ENSG00000153914.11chr5+6545189265454760654492906544942465455046654551620.315000.000140.01066includedHepG2PTBP1
    SERAB17ENSG00000124839.8chr2-2384866462384867982384858992384860252384946402384948000.150000.000010.00084includedHepG2PTBP1
    SETEX261ENSG00000144043.7chr2-7121895971219113712167067121694671220825712209050.092000.000930.04824includedHepG2PTBP1
    SEPLEKHM2ENSG00000116786.7chr1+1604782316047883160462281604641516051811160520400.250000.001940.08489includedHepG2PTBP1
    SEMLXIPENSG00000175727.9chr12+1226168381226169301226153901226154801226178941226185340.309000.001020.05216includedHepG2PTBP1
    SEMAP4ENSG00000047849.17chr3-4802887248028923480193544801942348040127480403690.092000.000000.00000includedHepG2PTBP1
    SEPDCD10ENSG00000114209.10chr3-1674431881674432611674378491674380611674525931674526510.235000.000000.00004includedHepG2PTBP1
    SEATG13ENSG00000175224.12chr11+4668639846686509466809414668103546686932466870690.256000.000000.00000includedHepG2PTBP1
    SEG3BP2ENSG00000138757.10chr4-7661998176620113765871147658723376649459766496290.356000.000050.00452includedHepG2PTBP1
    SESEC31AENSG00000138674.12chr4-8376329283763634837501528375021183765538837656620.064000.000120.00950includedHepG2PTBP1
    SESEC31AENSG00000138674.12chr4-8378278383782861837788418377891783783686837837250.188000.000010.00078includedHepG2PTBP1
    SEWNK1ENSG00000060237.12chr12+9898869901659873779875279908579909550.361000.000000.00010includedHepG2PTBP1
    SEMOV10ENSG00000155363.14chr1+1132420791132422341132413361132414111132423061132423830.117000.000550.03195includedHepG2PTBP1
    SEMMDENSG00000108960.3chr17-5348510653485181534811275348122953488617534887780.063000.000000.00012includedHepG2PTBP1
    SECADENSG00000084774.9chr2+2746343427463485274631322746322927463778274638230.209000.000000.00008includedHepG2PTBP1
    SESPTAN1ENSG00000197694.9chr9+1313552611313553211313537551313539041313564531313566520.312000.000000.00000includedHepG2PTBP1
    SEYIPF1ENSG00000058799.9chr1-5432067354320724543173915431794354325728543258260.540000.000000.00004includedHepG2PTBP1
    SESEC13ENSG00000157020.13chr3-1036094010361000103597511035977810362192103627420.262000.000640.03572includedHepG2PTBP1
    SEPICALMENSG00000073921.13chr11-8570129285701442856949088569501685707868857079720.455000.000000.00000includedHepG2PTBP1
    SEFUBP3ENSG00000107164.15chr9+1335065471335066801335060141335061751335069431335070170.095000.002310.09726includedHepG2PTBP1
    SEAGAP3ENSG00000133612.14chr7+1508176061508178321508170731508172321508208801508209370.290000.000000.00010includedHepG2PTBP1
    SEACIN1ENSG00000100813.10chr14-2354033323540395235386842353882623540635235407470.185000.002060.08875includedHepG2PTBP1
    SESUCOENSG00000094975.9chr1+1725466781725466991725446571725447631725469031725469590.262000.001330.06390includedHepG2PTBP1
    SEDPP9ENSG00000142002.12chr19-4683201468333646827074682850468348846836410.098000.001400.06608includedHepG2PTBP1
    SEZDHHC3ENSG00000163812.9chr3-4497439844974482449707974497092844974609449746910.110000.001720.07784includedHepG2PTBP1
    SEMCF2LENSG00000126217.16chr13+1137454341137455091137439491137440421137488271137489490.175000.000000.00052includedHepG2PTBP1
    SEA1CFENSG00000148584.10chr10-5262379252623840526196015261974552645340526454350.135000.000010.00087includedHepG2PTBP1
    SEABLIM1ENSG00000099204.14chr10-1162131371162132421162113821162114301162254561162255860.148000.000190.01358includedHepG2PTBP1
    SEABCC6ENSG00000091262.10chr16-1631412916314245163136781631380416315505163156880.160000.000000.00000includedHepG2PTBP1
    SEMLLT4ENSG00000130396.16chr6+1682945411682945861682915411682917091682975571682976520.307000.000000.00000includedHepG2PTBP1
    SEGTF2IENSG00000077809.8chr7+7415847774158589741577877415785974159096741592800.314000.000480.02887includedHepG2PTBP1
    SEABCC6ENSG00000091262.10chr16-1625684916257049162552941625542116259479162596350.346000.000000.00005includedHepG2PTBP1
    SEOCRLENSG00000122126.11chrX+1287183201287183441287102931287105291287209781287210950.192000.000010.00067includedHepG2PTBP1
    SESTIM1ENSG00000167323.5chr11+4105902410599541044924104728410770641077730.228000.000000.00000includedHepG2PTBP1
    SEZNF44ENSG00000197857.9chr19-1240404612404190123867701238689712405506124056950.524000.001840.08203includedHepG2PTBP1
    SEMXRA7ENSG00000182534.9chr17-7467992874680009746768587467696174681153746812470.123000.000000.00000includedHepG2PTBP1
    SEINO80EENSG00000169592.10chr16+3001273430012851300122493001236130016541300171140.240000.000660.03687includedHepG2PTBP1
    SEPROZENSG00000126231.9chr13+1138135121138135781138129671138130441138143271138144910.081000.000110.00879includedHepG2PTBP1
    SEZFYVE19ENSG00000166140.13chr15+4110258541102669411022684110241441102846411029550.065000.000140.01052includedHepG2PTBP1
    SECOQ5ENSG00000110871.10chr12-1209642591209643491209600161209601661209667421209669430.064000.002300.09669includedHepG2PTBP1
    SENSFL1CENSG00000088833.13chr20-1436358143636414356111435777143884414389190.148000.000000.00000includedHepG2PTBP1
    SEUSP4ENSG00000114316.8chr3-4934894649349087493480524934817049362134493621960.272000.001420.06673includedHepG2PTBP1
    SECEP78ENSG00000148019.8chr9+8088077480880822808802878088045980881357808819830.440000.000090.00763includedHepG2PTBP1
    SENRD1ENSG00000078618.15chr1-5230204052302110523018025230188452305897523061260.074000.000070.00610includedHepG2PTBP1
    SEDENND1AENSG00000119522.11chr9-1261500081261501371261459331261461921261656801261657690.454000.000000.00000includedHepG2PTBP1
    SEERP29ENSG00000089248.6chr12+1124575591124576981124511191124514131124599531124612550.054000.000030.00272includedHepG2PTBP1
    SENINLENSG00000101004.10chr20-2549030525490425254855232548571425491309254913760.107000.000080.00676includedHepG2PTBP1
    SESTX16ENSG00000124222.17chr20+5723467857234690572271285722714357242545572426530.240000.000000.00005includedHepG2PTBP1
    SEBAZ2BENSG00000123636.13chr2-1602535841602536111602522791602523451602538551602539150.621000.000020.00165includedHepG2PTBP1
    SEMRRFENSG00000148187.13chr9+1250483171250484451250474471250475661250540271250540770.362000.000010.00127includedHepG2PTBP1
    SESUFUENSG00000107882.7chr10+1043855671043856931043770461043771851043869311043870000.203000.000040.00372includedHepG2PTBP1
    SEPLD3ENSG00000105223.14chr19+4087145940871837408545964085467540872325408724170.183000.000160.01148includedHepG2PTBP1
    SEMORF4L2ENSG00000123562.12chrX-1029396081029396571029334261029335791029400981029401880.227000.000000.00000includedHepG2PTBP1
    SEAKAP13ENSG00000170776.15chr15+8620176786201821861986478619901886207793862079860.618000.001360.06490includedHepG2PTBP1
    SEEGLN1ENSG00000135766.8chr1-2315033142315033822314994962315022212315063072315064440.077000.000290.01956includedHepG2PTBP1
    SEDDCENSG00000132437.13chr7-5060761250607726506055575060567750611582506118110.281000.001130.05672includedHepG2PTBP1
    SEACSS3ENSG00000111058.3chr12+8159343881593490815931198159322381610679816107750.059000.000000.00001includedHepG2PTBP1





    30 RBPs can affect the splicing of PTBP1 :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SEPTBP1ENSG00000011304.12chr19+805491805569805012805187806407806556-0.129000.000010.01063excludedK562IGF2BP2
    SEPTBP1ENSG00000011304.12chr19+799412799443797424797505803560803636-0.072000.000000.00000excludedK562SF3B4
    SEPTBP1ENSG00000011304.12chr19+805491805569805012805187806407806556-0.068000.001080.03967excludedK562PRPF8
    SEPTBP1ENSG00000011304.12chr19+805491805569805012805187806407806556-0.114000.000050.03511excludedK562TIA1
    SEPTBP1ENSG00000011304.12chr19+8054918055698050128051878064078065560.109000.000090.03030includedK562WDR3
    SEPTBP1ENSG00000011304.12chr19+805491805569805012805187806407806556-0.161000.000000.00001excludedHepG2U2AF1
    SEPTBP1ENSG00000011304.12chr19+799412799443797424797505803560803636-0.084000.000000.00000excludedHepG2U2AF1
    SEPTBP1ENSG00000011304.12chr19+805491805569805012805187806407806556-0.376000.000000.00000excludedK562AKAP8L
    SEPTBP1ENSG00000011304.12chr19+8054918055698050128051878064078065560.098000.000010.04206includedHepG2AGGF1
    SEPTBP1ENSG00000011304.12chr19+8054918055698050128051878064078065560.136000.000000.00002includedK562WDR43
    SEPTBP1ENSG00000011304.12chr19+805491805569805012805187806407806556-0.242000.000000.00000excludedHepG2U2AF2
    SEPTBP1ENSG00000011304.12chr19+799412799443797424797505803560803636-0.091000.000000.00000excludedHepG2U2AF2
    SEPTBP1ENSG00000011304.12chr19+8054738056808050728051878064078070280.061000.000400.00564includedK562AQR
    SEPTBP1ENSG00000011304.12chr19+807868807902806407806556808359808452-0.068000.000000.00000excludedK562AQR
    SEPTBP1ENSG00000011304.12chr19+8054918055698050128051878064078065560.111000.000000.00006includedK562FXR1
    SEPTBP1ENSG00000011304.12chr19+805491805569805012805187806407806556-0.082000.000010.00023excludedK562PUS1
    SEPTBP1ENSG00000011304.12chr19+8054918055698050128051878064078065560.105000.000010.00433includedK562MTPAP
    SEPTBP1ENSG00000011304.12chr19+805491805569805012805187806407806556-0.105000.000010.00765excludedHepG2UPF1
    SEPTBP1ENSG00000011304.12chr19+8078688079028064078065568083598084520.052000.000220.01298includedHepG2MATR3
    SEPTBP1ENSG00000011304.12chr19+805491805569805012805187806407806556-0.134000.000040.00336excludedHepG2MATR3
    SEPTBP1ENSG00000011304.12chr19+805491805569805012805187806407806556-0.154000.000000.00000excludedHepG2LARP4
    SEPTBP1ENSG00000011304.12chr19+8054918055698050128051878064078065560.053000.000420.06653includedHepG2RBM15
    SEPTBP1ENSG00000011304.12chr19+799412799443797424797505803560803636-0.070000.000000.00001excludedHepG2SF3A3
    SEPTBP1ENSG00000011304.12chr19+805491805569805012805187806407806556-0.148000.000000.00000excludedHepG2SF3A3
    SEPTBP1ENSG00000011304.12chr19+807868807902806407806556808359808452-0.063000.000020.00107excludedHepG2SF3A3
    SEPTBP1ENSG00000011304.12chr19+807868807902806407806556808359808452-0.092000.000070.00907excludedHepG2TIAL1
    SEPTBP1ENSG00000011304.12chr19+805491805569805012805187806407806556-0.083000.000120.07243excludedK562HLTF
    SEPTBP1ENSG00000011304.12chr19+805491805569805012805187806407806556-0.132000.000000.00009excludedHepG2SF3B4
    SEPTBP1ENSG00000011304.12chr19+799412799443797424797505803560803636-0.108000.000000.00000excludedHepG2SF3B4
    SEPTBP1ENSG00000011304.12chr19+805491805569805012805187806407806556-0.109000.000000.00000excludedK562UTP18
    SEPTBP1ENSG00000011304.12chr19+8054918055698050128051878064078065560.081000.000290.05386includedK562UPF1
    SEPTBP1ENSG00000011304.12chr19+805491805569805012805187806407806556-0.118000.000030.00242excludedK562TARDBP
    SEPTBP1ENSG00000011304.12chr19+805491805569805012805187806407806556-0.090000.000030.00190excludedK562HNRNPU
    SEPTBP1ENSG00000011304.12chr19+805491805569805012805187806407806556-0.203000.000000.00000excludedK562RBM15
    SEPTBP1ENSG00000011304.12chr19+805491805569805012805187806407806556-0.338000.000000.00000excludedK562AGGF1
    SEPTBP1ENSG00000011304.12chr19+8054918055698050128051878064078065560.151000.000000.00000includedK562NCBP2
    SEPTBP1ENSG00000011304.12chr19+807868807902806407806556808359808452-0.086000.000210.01289excludedHepG2HNRNPU
    SEPTBP1ENSG00000011304.12chr19+805491805569805012805187806407806556-0.095000.001450.05363excludedK562PTBP1
    SEPTBP1ENSG00000011304.12chr19+805491805569805012805187806407806556-0.077000.000000.00601excludedK562CPEB4
    A3SSPTBP1ENSG00000011304.12chr19+805491805569805512805569805012805187-0.081000.000010.00166shorterHepG2RBM22
    A3SSPTBP1ENSG00000011304.12chr19+8083598084528083798084528064078065560.388000.007660.04197longerK562AQR
    A5SSPTBP1ENSG00000011304.12chr19+8055128056808055128055698064078065560.265000.000000.00000longerK562PUS1
    A5SSPTBP1ENSG00000011304.12chr19+8054538056808054538055698064078070280.102000.000000.00001longerK562AQR
    A5SSPTBP1ENSG00000011304.12chr19+8055128056808055128055698064078065560.125000.000000.00011longerK562AGGF1
    A5SSPTBP1ENSG00000011304.12chr19+8055128056808055128055698064078065560.083000.000100.01216longerK562RBM15
    A5SSPTBP1ENSG00000011304.12chr19+8054918056808054918055698064078065560.194000.000060.00963longerK562UTP18
    A5SSPTBP1ENSG00000011304.12chr19+8055128056808055128055698064078065560.097000.000010.00195longerK562AKAP8L
    RIPTBP1ENSG00000011304.12chr19+8040358044388040358042088042918044380.061000.000000.00000includedK562SF3B4
    RIPTBP1ENSG00000011304.12chr19+8083598087628083598084528085458087620.071000.000000.00000includedK562PUS1
    RIPTBP1ENSG00000011304.12chr19+8040358044388040358042088042918044380.116000.000000.00000includedK562PUS1
    RIPTBP1ENSG00000011304.12chr19+8040358044388040358042088042918044380.087000.000000.00000includedHepG2SF3A3
    RIPTBP1ENSG00000011304.12chr19+8040358044388040358042088042918044380.057000.000000.00000includedK562PRPF8
    RIPTBP1ENSG00000011304.12chr19+8040358044388040358042088042918044380.051000.000000.00000includedK562AKAP8L
    RIPTBP1ENSG00000011304.12chr19+8040358044388040358042088042918044380.070000.000000.00000includedHepG2U2AF1
    RIPTBP1ENSG00000011304.12chr19+8083598087628083598084528085458087620.140000.007390.09585includedK562U2AF1
    RIPTBP1ENSG00000011304.12chr19+8083598087628083598084528085458087620.073000.006680.07142includedK562U2AF2
    RIPTBP1ENSG00000011304.12chr19+8083598087628083598084528085458087620.073000.000000.00000includedHepG2RBM22
    RIPTBP1ENSG00000011304.12chr19+8040358044388040358042088042918044380.081000.000000.00000includedK562EFTUD2
    RIPTBP1ENSG00000011304.12chr19+808359808762808359808452808545808762-0.064000.000090.01184excludedK562FXR2
    RIPTBP1ENSG00000011304.12chr19+8042918047028042918044388045318047020.085000.000000.00000includedK562AQR
    RIPTBP1ENSG00000011304.12chr19+8040358044388040358042088042918044380.136000.000000.00000includedK562AQR
    RIPTBP1ENSG00000011304.12chr19+8083598087628083598084528085458087620.054000.000000.00000includedK562AQR
    RIPTBP1ENSG00000011304.12chr19+8040358044388040358042088042918044380.081000.000000.00000includedK562PTBP1
    RIPTBP1ENSG00000011304.12chr19+8083598087628083598084528085458087620.073000.000070.00250includedK562PTBP1
    MXEPTBP1ENSG00000011304.12chr19+799412799443806407806556797424797505807868807902-0.066000.003550.077952includedK562RBM15
    MXEPTBP1ENSG00000011304.12chr19+805491805569806407806556805012805187808359808452-0.078000.000230.008232includedK562TARDBP
    MXEPTBP1ENSG00000011304.12chr19+8064078065568078688079028050128051878083598084520.144000.000030.001801includedHepG2SF3B4

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    The PTBP1 protein affects to its own RNA splicing after knockdown/knockout.

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SEPTBP1ENSG00000011304.12chr19+805491805569805012805187806407806556-0.095000.001450.05363excludedK562PTBP1
    RIPTBP1ENSG00000011304.12chr19+8040358044388040358042088042918044380.081000.000000.00000includedK562PTBP1
    RIPTBP1ENSG00000011304.12chr19+8083598087628083598084528085458087620.073000.000070.00250includedK562PTBP1