POLDIP2

General Information

Gene Name : POLDIP2
Gene ID : ENSG00000004142.11
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: POLDIP2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	POLDIP2	ENSG00000004142.11	75.75	90.23	82.99	ENCSR000AEF
HepG2	POLDIP2	ENSG00000004142.11	90.40	79.48	84.94	ENCSR985KAT
K562	POLDIP2	ENSG00000004142.11	91.60	92.08	91.84	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for POLDIP2 is not avaliable on ENCORE database.

Proteins bound to RNA

POLDIP2 RNA is bound by 14 proteins.

CanvasJS.com

eCLIP assay for POLDIP2 is not avaliable on ENCORE database.

14 proteins are bound to POLDIP2 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	26684385	26684461	-	CDS,intron-Distal,intron-Proximal	4.89997	54.63117	HepG2	DDX3X
chr17	26684461	26684528	-	CDS,intron-Distal,intron-Proximal	4.42897	20.95821	HepG2	DDX3X
chr17	26674843	26674922	-	3'-UTR,intron-Distal	4.05770	9.18768	K562	PABPC4
chr17	26677681	26677763	-	intron-Distal,intron-Proximal	3.37959	8.51251	HepG2	PRPF8
chr17	26684272	26684367	-	CDS,intron-Distal,intron-Proximal	4.92273	8.44604	HepG2	PRPF8
chr17	26678641	26678706	-	CDS,intron-Distal,intron-Proximal	3.66955	8.16221	HepG2	PRPF8
chr17	26680023	26680106	-	CDS,intron-Distal,intron-Proximal	3.73016	7.67169	K562	SF3B4
chr17	26684443	26684536	-	CDS,intron-Distal,intron-Proximal	4.74977	7.63469	K562	DDX3X
chr17	26674922	26675017	-	3'-UTR,intron-Distal	3.01738	7.32916	K562	PABPC4
chr17	26675117	26675168	-	3'-UTR,CDS,intron-Distal	3.35645	6.82132	K562	YBX3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 34 entries

eCLIP assay for POLDIP2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for POLDIP2 is not available on ENCORE database.
87 RBPs can affect the levels of POLDIP2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for POLDIP2 is not available on ENCORE database.

87 RBPs can affect the gene expression of POLDIP2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
POLDIP2	ENSG00000004142.7	1720.95050	3255.36970	-0.91960	35.93730	34.21530	HepG2	ETF1
POLDIP2	ENSG00000004142.7	2984.24230	1420.69540	1.07070	24.43150	22.93540	HepG2	BOP1
POLDIP2	ENSG00000004142.7	4429.82960	2716.49210	0.70540	24.28770	22.54970	K562	DDX47
POLDIP2	ENSG00000004142.7	1945.42650	3073.14730	-0.65960	21.00790	19.96380	HepG2	SRFBP1
POLDIP2	ENSG00000004142.7	2343.75360	1382.08100	0.76190	19.66850	18.16830	K562	FXR1
POLDIP2	ENSG00000004142.7	1423.65990	2374.28960	-0.73790	19.93500	17.88460	HepG2	HNRNPA2B1
POLDIP2	ENSG00000004142.7	2216.36270	1189.97220	0.89720	19.06850	16.91820	K562	EIF3G
POLDIP2	ENSG00000004142.7	1336.88840	2594.23770	-0.95640	15.18520	13.86650	HepG2	EIF2S1
POLDIP2	ENSG00000004142.7	1705.37390	2678.06880	-0.65110	9.59670	8.65400	HepG2	TAF15
POLDIP2	ENSG00000004142.7	1048.86170	1826.65400	-0.80040	9.96840	8.61130	HepG2	DDX55
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 96 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for POLDIP2 is not available on ENCORE database.

4 RBPs can affect the splicing of POLDIP2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	POLDIP2	ENSG00000004142.7	chr17	-	26677791	26677940			26677791	26677818	26678689	26678826	0.06000	0.00000	0.00001	longer	K562	U2AF2
A3SS	POLDIP2	ENSG00000004142.7	chr17	-	26677791	26677940			26677791	26677818	26678689	26678826	0.07200	0.00000	0.00000	longer	K562	SF3B4
A3SS	POLDIP2	ENSG00000004142.7	chr17	-	26682820	26682937			26682820	26682902	26684313	26684393	0.14200	0.00000	0.00001	longer	K562	AQR
MXE	POLDIP2	ENSG00000004142.7	chr17	-	26676108	26676188	26677463	26677589	26674202	26675257	26677791	26677818	-0.11300	0.00162	0.06234	2included	K562	SAFB

Showing 1 to 4 of 4 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

POLDIP2

General Information

Functions

Localization

Domains (AlphaFold: POLDIP2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for POLDIP2 is not avaliable on ENCORE database.

14 proteins are bound to POLDIP2 RNA:

eCLIP assay for POLDIP2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for POLDIP2 is not available on ENCORE database.

87 RBPs can affect the gene expression of POLDIP2 :

The Knockdown/knockout RNA-Seq assay for POLDIP2 is not available on ENCORE database.

4 RBPs can affect the splicing of POLDIP2 :

The Knockdown/knockout RNA-Seq assay for POLDIP2 is not avaliable on ENCORE database.