ETF1

General Information

Gene Name       : ETF1
Gene ID             : ENSG00000120705.12
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: ETF1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ETF1ENSG00000120705.12117.9698.97108.47ENCSR000AEF
HepG2ETF1ENSG00000120705.1247.2593.3270.28ENCSR985KAT
K562ETF1ENSG00000120705.12116.82133.24125.03ENCSR000AEO

Assays

2 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
knockdown followed by RNA-seq ETF1-BGHLV37-HepG2ENCSR840QOHETF1HepG2ReleasedENCSR997HCQ   shRNAKD% = 55.5,50.9
knockdown followed by RNA-seq ETF1-BGKcLV08-K562ENCSR066ZMFETF1K562ReleasedENCSR015KGT   CRISPRKD% = 55.8,53.6






  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
ETF1ENCAB767NXERN111PW1Released, ENCODE3Released, ENCODE3BGHLV37-19, Released, ENCODE3BGKcLV08-33, Released, ENCODE4


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
ETF1K562shRNABGKLV36-17,BGKLV36-18BGKLV36-1,BGKLV36-27.7,15.8NotSatisfiedENCODE3
ETF1K562shRNABGKLV36-19,BGKLV36-20BGKLV36-1,BGKLV36-232.9,20.0NotSatisfiedENCODE3
ETF1K562shRNABGKLV38-31,BGKLV38-32BGKLV38-1,BGKLV38-228.0,37.1NotSatisfiedENCODE3
ETF1K562shRNABGKLV38-33,BGKLV38-34BGKLV38-1,BGKLV38-225.5,25.6NotSatisfiedENCODE3
ETF1HepG2shRNAENCSR840QOHENCSR997HCQETF1_BGHLV37-19,ETF1_BGHLV37-20NT_BGHLV37-1,NT_BGHLV37-255.5,50.9ReleasedENCODE3
ETF1HepG2shRNABGHLV37-21,BGHLV37-22BGHLV37-1,BGHLV37-213.1,21.3NotSatisfiedENCODE3
ETF1HepG2shRNABGHLV37-23,BGHLV37-24BGHLV37-1,BGHLV37-20.0,0.0NotSatisfiedENCODE3
ETF1HepG2shRNABGHLV37-25,BGHLV37-26BGHLV37-1,BGHLV37-225.8,25.8NotSatisfiedENCODE3
ETF1K562CRISPRBGKcLV08-31,BGKcLV08-32BGKcLV08-1,BGKcLV08-243.0,43.9NotSatisfiedENCODE4
ETF1K562CRISPRENCSR066ZMFENCSR015KGTETF1-BGKcLV08-33,ETF1-BGKcLV08-34NT-BGKcLV08-1,NT-BGKcLV08-255.8,53.6ReleasedENCODE4


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
ETF1Product_ID: RN111PW
Lot_ID: 1
Source: MBLI
Target Name: ETF1-human		 HepG2_MBLI_RN111PW_001_ETF1.png<br>Caption: IP-Western Blot analysis of HepG2 whole cell lysate using ETF1 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-ETF1 antibody (lanes under 'ETF1').
 ETF1-HEPG2.png<br>Caption: Western blot following shRNA against ETF1 in HepG2 whole cell lysate using ETF1 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against ETF1.ETF1 protein appears as the green band, GAPDH serves as a control and appears in red.
 K562_MBLI_RN111PW_001_ETF1.png<br>Caption: IP-Western Blot analysis of K562 whole cell lysate using ETF1 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-ETF1 antibody (lanes under 'ETF1').
 ETF1-K562-CRISPR.png<br>Caption: Western blot following CRISPR against ETF1 in K562 whole cell lysate using ETF1 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against ETF1.ETF1 protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.








RNA Targets

  • eCLIP assay for ETF1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ETF1 RNA is bound by 29 proteins.  







eCLIP assay for ETF1 is not avaliable on ENCORE database.





29 proteins are bound to ETF1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5137843393137843428-3'-UTR,intron-Distal4.0873711.93524K562IGF2BP2
chr5137843514137843588-3'-UTR,intron-Distal,intron-Proximal4.023013.19668HepG2UPF1
chr5137842277137842385-3'-UTR,intron-Distal3.1347213.96293K562FAM120A
chr5137842908137842953-3'-UTR,intron-Distal4.385064.57464K562PUM2
chr5137843359137843442-3'-UTR,intron-Distal3.112239.16142K562FAM120A
chr5137843358137843419-3'-UTR,intron-Distal5.6816110.33424HepG2IGF2BP1
chr5137843352137843393-3'-UTR,intron-Distal4.1448112.95841K562IGF2BP2
chr5137843365137843421-3'-UTR,intron-Distal3.4033112.08566K562YBX3
chr5137841811137841875-3'-UTR,intron-Distal4.5295810.00297K562PUM2
chr5137843358137843419-3'-UTR,intron-Distal4.610577.16597HepG2IGF2BP3
chr5137843249137843287-3'-UTR,intron-Distal3.318514.14964K562UPF1
chr5137842793137842857-3'-UTR,intron-Distal5.4563417.40707K562FAM120A
chr5137842821137842866-3'-UTR,intron-Distal3.732894.54958K562IGF2BP2
chr5137843916137844014-3'-UTR,CDS,intron-Distal3.378153.50786HepG2G3BP1
chr5137843188137843230-3'-UTR,intron-Distal3.449867.86167K562YBX3
chr5137854497137854566-3'-UTR,CDS,intron-Distal,intron-Proximal3.5456710.69080HepG2BUD13
chr5137843230137843250-3'-UTR,intron-Distal3.543425.58482K562YBX3
chr5137842695137842735-3'-UTR,intron-Distal4.029454.24288K562UPF1
chr5137847148137847217-3'-UTR,CDS,intron-Distal,intron-Proximal4.122556.84316HepG2BCLAF1
chr5137842674137842752-3'-UTR,intron-Distal3.6186511.01661K562FAM120A
chr5137842796137842859-3'-UTR,intron-Distal4.7398910.21308K562UPF1
chr5137842184137842237-3'-UTR,intron-Distal3.886797.00531K562TIA1
chr5137878570137878612-5'-UTR,CDS,intron-Distal3.031495.24460HepG2DDX3X
chr5137878554137878626-5'-UTR,CDS,intron-Distal,intron-Proximal3.326517.50965HepG2GRWD1
chr5137878783137878804-5'-UTR,intron-Distal4.238393.33043HepG2NCBP2
chr5137878785137878900-5'-UTR,intron-Distal,intron-Proximal3.3172911.34716K562DDX3X
chr5137878578137878625-5'-UTR,CDS,intron-Distal3.062966.80151HepG2BCLAF1
chr5137878516137878552-5'-UTR,CDS,intron-Distal,intron-Proximal3.142515.48830HepG2BUD13
chr5137878596137878625-5'-UTR,CDS,intron-Distal3.723045.07449K562DDX24
chr5137878436137878476-5'-UTR,intron-Distal,intron-Proximal4.073303.25843K562SRSF1
chr5137878815137878887-5'-UTR,intron-Distal,intron-Proximal3.518498.46624K562GEMIN5
chr5137878520137878565-5'-UTR,CDS,intron-Distal,intron-Proximal3.689185.76403K562UCHL5
chr5137878550137878596-5'-UTR,CDS,intron-Distal3.993325.64813K562DDX24
chr5137878422137878480-5'-UTR,intron-Distal,intron-Proximal3.802635.55137HepG2SRSF1
chr5137878518137878556-5'-UTR,CDS,intron-Distal,intron-Proximal3.168178.46305K562ZNF622
chr5137878783137878862-5'-UTR,intron-Distal,intron-Proximal3.123957.12779HepG2DDX3X
chr5137878785137878801-5'-UTR,intron-Distal3.382923.60157HepG2GRWD1
chr5137878700137878819-5'-UTR,intron-Distal,intron-Proximal3.184345.23564HepG2AQR
chr5137878570137878672-5'-UTR,CDS,intron-Distal,intron-Proximal4.2899218.83265K562AQR
chr5137878612137878627-5'-UTR,intron-Distal,intron-Proximal3.001276.32326HepG2DDX3X
chr5137878475137878498-5'-UTR,intron-Distal,intron-Proximal4.424417.53589K562AQR
chr5137878282137878330-5'-UTR,intron-Distal,intron-Proximal3.345825.38345HepG2RBFOX2
chr5137844317137844378-CDS,intron-Distal,intron-Proximal3.815226.65114HepG2PRPF8
chr5137854489137854509-CDS,intron-Distal3.167154.33023K562ZNF622
chr5137844481137844552-CDS,intron-Distal,intron-Proximal3.430435.28154K562SF3B4
chr5137846736137846828-CDS,intron-Distal,intron-Proximal3.599416.20035HepG2BCLAF1
chr5137853340137853388-CDS,intron-Distal,intron-Proximal4.137964.24698K562IGF2BP1
chr5137853334137853388-CDS,intron-Distal,intron-Proximal3.220395.00751HepG2BCLAF1
chr5137844476137844582-CDS,intron-Distal,intron-Proximal3.454598.88582K562BUD13
chr5137869588137869715-intron-Distal3.477873.94088HepG2QKI
chr5137874664137874769-intron-Distal4.307645.46313K562KHSRP
chr5137846635137846720-intron-Distal,intron-Proximal3.031599.13138K562AQR
chr5137877771137877829-intron-Distal3.383074.83960HepG2RBFOX2
chr5137853865137853900-intron-Distal3.066315.83663HepG2HNRNPC
chr5137878640137878700-intron-Distal,intron-Proximal5.472876.02529K562SF3B4
chr5137847841137847890-intron-Distal3.058927.10884HepG2HNRNPC
chr5137847034137847097-intron-Distal,intron-Proximal3.731865.63970K562TARDBP
chr5137877652137877720-intron-Distal4.197944.62276K562TARDBP
chr5137854286137854381-intron-Distal,intron-Proximal4.388896.99120K562AQR
chr5137878180137878296-intron-Distal,intron-Proximal3.804323.06617K562HNRNPK
chr5137846917137846982-intron-Distal,intron-Proximal3.331863.80334HepG2U2AF2
chr5137859262137859371-intron-Distal3.245033.35377HepG2QKI
chr5137853846137853865-intron-Distal3.071975.83663HepG2HNRNPC
chr5137847031137847065-intron-Distal,intron-Proximal4.906634.96013K562PRPF8
chr5137846209137846251-intron-Distal,intron-Proximal3.464894.88100K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ETF1 is not avaliable on ENCORE database.



Diffrential Expression
  • 7,910 differentially expressed genes after Knockdown/Knockout ETF1 protein.  





  • 106 RBPs can affect the levels of ETF1.  







7,910 differentially expressed genes after Knockdown/Knockout ETF1 protein :

Only display 100 entries as example. Please click "View All" button to see all 7,910 entries.     

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DPM1ENSG00000000419.82221.586802560.81660-0.205002.195201.64880HepG2ETF1
SCYL3ENSG00000000457.9297.72740207.016800.524103.020302.39640HepG2ETF1
C1orf112ENSG00000000460.12307.80120566.74670-0.8807011.7461010.64800HepG2ETF1
FUCA2ENSG00000001036.93291.644705169.92840-0.6513022.1904020.76620HepG2ETF1
GCLCENSG00000001084.62987.625302279.050400.390507.376706.47470HepG2ETF1
NFYAENSG00000001167.102762.295501851.723700.5769014.3699013.17050HepG2ETF1
NIPAL3ENSG00000001461.12746.67800505.649800.562206.737205.86720HepG2ETF1
LAS1LENSG00000001497.121044.837501331.82270-0.350104.245003.52780HepG2ETF1
SEMA3FENSG00000001617.71570.936901051.254400.5794010.221709.18500HepG2ETF1
ANKIB1ENSG00000001629.52207.527801863.589200.244203.163002.52730HepG2ETF1
CYP51A1ENSG00000001630.113599.521805895.20390-0.711703.776803.09280HepG2ETF1
KRIT1ENSG00000001631.101453.122201113.299800.384205.391504.60040HepG2ETF1
RAD52ENSG00000002016.12560.94480435.816300.364002.845702.23740HepG2ETF1
LAP3ENSG00000002549.82606.678403020.81600-0.212702.089701.55230HepG2ETF1
CD99ENSG00000002586.132786.296503249.66920-0.221902.717902.12160HepG2ETF1
MAD1L1ENSG00000002822.11531.77420698.16360-0.392802.558301.97640HepG2ETF1
LASP1ENSG00000002834.1311422.194209865.894600.211203.247402.60450HepG2ETF1
M6PRENSG00000003056.34166.960703251.972000.357607.228806.33390HepG2ETF1
CFLARENSG00000003402.153771.885003075.833500.294204.819304.06540HepG2ETF1
TFPIENSG00000003436.1021537.5963014662.301600.5546020.8084019.42030HepG2ETF1
NDUFAF7ENSG00000003509.111125.53800915.806500.297402.945002.32790HepG2ETF1
RBM5ENSG00000003756.125149.565904610.297400.159501.812301.30440HepG2ETF1
SARM1ENSG00000004139.972.9854035.982501.020202.401501.83400HepG2ETF1
POLDIP2ENSG00000004142.71720.950503255.36970-0.9196035.9373034.21530HepG2ETF1
AK2ENSG00000004455.123461.806104524.62640-0.386308.107807.17190HepG2ETF1
FKBP4ENSG00000004478.51644.816203069.29210-0.9000033.5263031.84220HepG2ETF1
KDM1AENSG00000004487.113499.537905739.93600-0.7139027.3948025.83270HepG2ETF1
RECQLENSG00000004700.11780.051301262.70310-0.694908.653007.69100HepG2ETF1
CCDC132ENSG00000004766.11797.65360607.048600.393903.900503.20720HepG2ETF1
NDUFAB1ENSG00000004779.52683.793903042.13660-0.180801.967701.44180HepG2ETF1
ZMYND10ENSG00000004838.951.9985021.589501.268002.523701.94550HepG2ETF1
CDC27ENSG00000004897.74032.493704807.57070-0.253603.809003.12330HepG2ETF1
HCCSENSG00000004961.10795.57110611.522000.379503.613802.94110HepG2ETF1
DVL2ENSG00000004975.71050.467301405.97550-0.420506.091005.25840HepG2ETF1
UPF1ENSG00000005007.82811.692203767.60240-0.422209.473408.47020HepG2ETF1
SLC25A5ENSG00000005022.57120.467409657.65050-0.4397012.9821011.83690HepG2ETF1
DHX33ENSG00000005100.81516.517802407.65370-0.6669016.9388015.65730HepG2ETF1
LIG3ENSG00000005156.7717.654601456.54420-1.0212029.1701027.56830HepG2ETF1
AC004381.6ENSG00000005189.15310.78450462.37050-0.573105.101604.33070HepG2ETF1
SPPL2BENSG00000005206.121103.32610809.731400.446203.109102.47750HepG2ETF1
MSL3ENSG00000005302.13503.69100362.758600.473403.333802.68320HepG2ETF1
CREBBPENSG00000005339.83458.366702982.193400.213602.567701.98500HepG2ETF1
GCFC2ENSG00000005436.9972.372701140.79020-0.230501.913301.39370HepG2ETF1
WDR54ENSG00000005448.1270.85670363.89770-2.3606037.8643036.11350HepG2ETF1
CROTENSG00000005469.7930.29780422.019801.1403025.0116023.51410HepG2ETF1
RHBDD2ENSG00000005486.121518.14830877.736400.7904011.8859010.78070HepG2ETF1
IBTKENSG00000005700.104720.890804067.298700.214903.140902.50680HepG2ETF1
ZNF195ENSG00000005801.121199.14510869.745500.463206.333705.48600HepG2ETF1
MYCBP2ENSG00000005810.132651.474402255.722900.233102.891002.27880HepG2ETF1
FBXL3ENSG00000005812.61261.16270747.263200.7550015.1315013.90710HepG2ETF1
PDK2ENSG00000005882.7730.81000979.68530-0.422805.428104.63430HepG2ETF1
ITGA3ENSG00000005884.132707.34610205.327703.7208083.0238080.63060HepG2ETF1
ZFXENSG00000005889.112351.296901500.520100.6479016.0580014.80620HepG2ETF1
LAMP2ENSG00000005893.113210.809506038.81600-0.9113041.2396039.43130HepG2ETF1
GGNBP2ENSG00000005955.82478.602002044.103100.278004.055903.35230HepG2ETF1
ASB4ENSG00000005981.886.73160250.68960-1.5313014.3954013.19490HepG2ETF1
GDE1ENSG00000006007.73756.412602843.184100.401708.183207.24320HepG2ETF1
TMEM98ENSG00000006042.71840.283602848.94080-0.6305017.3225016.02850HepG2ETF1
MAP3K14ENSG00000006062.9245.87890174.258600.496602.312601.75420HepG2ETF1
TMEM132AENSG00000006118.101174.244501527.36520-0.379305.571204.76740HepG2ETF1
AP2B1ENSG00000006125.127841.759406849.742700.195002.845402.23740HepG2ETF1
ZNF263ENSG00000006194.61398.235701060.738900.398405.377804.58780HepG2ETF1
CX3CL1ENSG00000006210.65642.030703841.728400.5544013.4960012.33230HepG2ETF1
SPATA20ENSG00000006282.154773.444903122.703700.6121019.1091017.76720HepG2ETF1
TNFRSF12AENSG00000006327.91679.50590735.454001.1912040.6126038.81620HepG2ETF1
DLX6ENSG00000006377.9313.50120238.978200.391501.925401.40470HepG2ETF1
MAP3K9ENSG00000006432.11923.39390775.403800.251902.202401.65540HepG2ETF1
RALAENSG00000006451.31450.237101207.443400.264202.734702.13680HepG2ETF1
BAIAP2L1ENSG00000006453.92146.218701226.309800.8074023.1087021.65990HepG2ETF1
AGKENSG00000006530.11657.612701033.18980-0.6518010.407809.36290HepG2ETF1
ALDH3B1ENSG00000006534.11127.55050276.54720-1.116509.287208.29270HepG2ETF1
FARP2ENSG00000006607.91230.089401795.98750-0.5460010.119609.08790HepG2ETF1
GGCTENSG00000006625.13675.19680989.80780-0.551807.748906.82890HepG2ETF1
DBF4ENSG00000006634.3451.52980851.34360-0.9149015.7901014.54700HepG2ETF1
IFRD1ENSG00000006652.93596.577901297.133301.4712085.3200082.89180HepG2ETF1
ARSDENSG00000006756.11951.86990548.234800.7959013.7173012.54350HepG2ETF1
MARK4ENSG00000007047.101088.618601445.92790-0.409506.024505.19510HepG2ETF1
PROM1ENSG00000007062.7512.07400986.73760-0.9463019.5876018.23090HepG2ETF1
CCDC124ENSG00000007080.6356.01390602.22320-0.758403.960503.26290HepG2ETF1
PAFAH1B1ENSG00000007168.84096.483003093.428800.405109.009508.02840HepG2ETF1
TRAPPC6AENSG00000007255.665.20870234.36310-1.8456017.0578015.77180HepG2ETF1
RHBDF1ENSG00000007384.11648.94490356.356500.8647011.8369010.73450HepG2ETF1
BAIAP3ENSG00000007516.9339.40090257.047700.400902.313201.75460HepG2ETF1
CRAMP1LENSG00000007545.111738.674901361.593800.352604.561203.82420HepG2ETF1
DNAJC11ENSG00000007923.112159.959202565.56370-0.248303.411002.75340HepG2ETF1
MYLIPENSG00000007944.10326.55840209.894000.637604.162203.45080HepG2ETF1
E2F2ENSG00000007968.6186.82350385.58990-1.0454011.3224010.23780HepG2ETF1
CDK11AENSG00000008128.181178.657701004.794800.230101.898901.38080HepG2ETF1
CYTH3ENSG00000008256.11455.85460355.219900.359802.452401.88050HepG2ETF1
SYPL1ENSG00000008282.32879.662602282.932200.334905.452704.65650HepG2ETF1
SPAG9ENSG00000008294.165092.901706214.40190-0.287104.745003.99630HepG2ETF1
CELSR3ENSG00000008300.101396.741201680.53050-0.266903.200802.56170HepG2ETF1
AASSENSG00000008311.10495.64770831.98830-0.7472011.2925010.20890HepG2ETF1
PLEKHG6ENSG00000008323.11400.58500517.16810-0.368502.525101.94690HepG2ETF1
MPNDENSG00000008382.11148.01680421.62620-1.5102021.7125020.30350HepG2ETF1
MGST1ENSG00000008394.8796.168802727.31400-1.7763027.2649025.70650HepG2ETF1
NFIXENSG00000008441.12572.44010782.19450-0.450404.775804.02480HepG2ETF1
ST3GAL1ENSG00000008513.101190.165602117.66200-0.8313024.8532023.36270HepG2ETF1
PKD1ENSG00000008710.134076.322701948.954601.0645014.7497013.53940HepG2ETF1
MED24ENSG00000008838.132621.600503431.01670-0.388208.149607.21120HepG2ETF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





106 RBPs can affect the gene expression of ETF1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ETF1ENSG00000120705.83554.086802674.634700.410007.466406.56750HepG2ACO1
ETF1ENSG00000120705.85510.699603751.419500.554705.467504.74930HepG2AKAP1
ETF1ENSG00000120705.83848.981503104.071700.310202.352001.62460HepG2ASCC1
ETF1ENSG00000120705.81426.975903436.80560-1.2681034.2337032.54540HepG2BOP1
ETF1ENSG00000120705.82668.819303971.23580-0.573403.733702.58790HepG2CCAR1
ETF1ENSG00000120705.81503.502602830.46870-0.912708.112806.81690HepG2CNOT7
ETF1ENSG00000120705.81813.950503155.17390-0.7986013.1925011.81710HepG2CPSF6
ETF1ENSG00000120705.83131.649703653.91020-0.222502.218001.63200HepG2CELF1
ETF1ENSG00000120705.82540.317203928.93440-0.6291025.2079023.39530HepG2DAZAP1
ETF1ENSG00000120705.85291.215303086.676800.7774010.014708.91970HepG2DDX6
ETF1ENSG00000120705.81739.017102259.89670-0.378003.743702.61030HepG2DHX30
ETF1ENSG00000120705.81832.686702343.06860-0.354404.996404.07650HepG2DNAJC21
ETF1ENSG00000120705.81920.866902322.41610-0.273904.526803.72800HepG2DNAJC2
ETF1ENSG00000120705.82349.132801627.929500.529005.416004.18280HepG2EIF3D
ETF1ENSG00000120705.82532.340403713.03300-0.552107.276205.98430HepG2EIF4G2
ETF1ENSG00000120705.81352.188304966.73230-1.87700146.57730143.40180HepG2ETF1
ETF1ENSG00000120705.82080.572703160.58390-0.603202.374001.43930HepG2FTO
ETF1ENSG00000120705.82325.844003576.63300-0.620806.956505.97100HepG2GPKOW
ETF1ENSG00000120705.81966.198702553.74580-0.377203.273102.21530HepG2HDGF
ETF1ENSG00000120705.82862.833702365.516200.275202.276001.68500HepG2HNRNPA1
ETF1ENSG00000120705.81970.104702631.21200-0.417504.555203.68000HepG2HNRNPC
ETF1ENSG00000120705.82449.739603693.58650-0.5924016.3600014.80830HepG2HNRNPF
ETF1ENSG00000120705.83918.927903107.456100.334603.083302.34730HepG2HNRNPK
ETF1ENSG00000120705.83074.485503578.98390-0.219203.753402.97620HepG2HNRNPL
ETF1ENSG00000120705.8789.470003413.24700-2.1122072.4978070.01550HepG2HNRNPLL
ETF1ENSG00000120705.81893.089902613.81500-0.465409.886608.79730HepG2HNRNPU
ETF1ENSG00000120705.82345.019203637.13660-0.6332012.3983010.97810HepG2IGF2BP1
ETF1ENSG00000120705.82189.500702669.92340-0.286205.890904.85730HepG2ILF2
ETF1ENSG00000120705.82000.694602445.19280-0.289402.431801.47510HepG2KIF1C
ETF1ENSG00000120705.84563.168503328.429400.455102.691702.06850HepG2MATR3
ETF1ENSG00000120705.82488.393703481.07370-0.484303.154002.11330HepG2MTPAP
ETF1ENSG00000120705.84184.042203406.917100.296301.894601.36500HepG2NCBP2
ETF1ENSG00000120705.82956.448703895.91870-0.398106.248405.10550HepG2NOL12
ETF1ENSG00000120705.82500.996703026.49800-0.275102.070601.41920HepG2NSUN2
ETF1ENSG00000120705.83579.799402586.844600.468602.351801.54570HepG2PABPC1
ETF1ENSG00000120705.84525.749502940.325600.6221020.1899018.79350HepG2PCBP1
ETF1ENSG00000120705.84359.112902723.958300.678205.460804.03940HepG2PCBP2
ETF1ENSG00000120705.81813.813702331.31200-0.362105.053504.08610HepG2PPIL4
ETF1ENSG00000120705.82944.593002328.741000.338405.654204.58980HepG2PRPF4
ETF1ENSG00000120705.83726.721202991.902000.316705.657604.93130HepG2PTBP1
ETF1ENSG00000120705.84793.637003947.825600.280006.648505.81230HepG2PUM1
ETF1ENSG00000120705.83365.882403944.95900-0.229002.311001.69630HepG2PUM2
ETF1ENSG00000120705.83200.326902724.345700.232202.755102.14020HepG2PUS1
ETF1ENSG00000120705.87181.583102628.568601.4499017.7545016.11760HepG2RAVER1
ETF1ENSG00000120705.84976.294304151.269300.261403.588203.01940HepG2RBM22
ETF1ENSG00000120705.83047.452502345.236400.377803.322302.15920HepG2RCC2
ETF1ENSG00000120705.83361.799103978.77370-0.243101.919701.33830HepG2RPLP0
ETF1ENSG00000120705.82042.550502841.59330-0.476303.275002.40530HepG2RPS3A
ETF1ENSG00000120705.83368.943802264.219800.573206.399805.25940HepG2RRP9
ETF1ENSG00000120705.81471.410702327.71050-0.6617020.0328018.52290HepG2SAFB2
ETF1ENSG00000120705.82098.967601589.836300.400703.486902.42790HepG2SERBP1
ETF1ENSG00000120705.84321.880802614.002500.725307.159806.03990HepG2SF3A3
ETF1ENSG00000120705.84077.585203114.936900.388408.139107.20700HepG2SF3B4
ETF1ENSG00000120705.83108.917303565.85810-0.197803.113502.37580HepG2SLBP
ETF1ENSG00000120705.83250.919802714.491400.260105.081904.25370HepG2SMN1
ETF1ENSG00000120705.85727.294504688.706300.288606.173005.50650HepG2SRFBP1
ETF1ENSG00000120705.85788.634903251.327600.8321040.5763039.23030HepG2SRSF1
ETF1ENSG00000120705.82644.214303628.79810-0.4567010.349009.15080HepG2SRSF7
ETF1ENSG00000120705.84128.349202645.134900.6421022.5482021.25190HepG2SRSF9
ETF1ENSG00000120705.83692.198404176.00170-0.177602.652002.04000HepG2SUCLG1
ETF1ENSG00000120705.82515.421703326.86550-0.403404.160603.29390HepG2TARDBP
ETF1ENSG00000120705.82133.296602539.76280-0.251602.548302.06470HepG2TIAL1
ETF1ENSG00000120705.83326.862602431.127000.452404.993204.16330HepG2U2AF1
ETF1ENSG00000120705.81669.325202318.22180-0.4738010.343909.14510HepG2UPF1
ETF1ENSG00000120705.83385.406102238.150100.5969018.0518016.72200HepG2UTP3
ETF1ENSG00000120705.82301.994402906.85370-0.336602.086601.44900HepG2XRN2
ETF1ENSG00000120705.81929.463102298.16100-0.252303.768603.00560HepG2ZC3H8
ETF1ENSG00000120705.83429.101902549.598400.4275012.5597011.60630HepG2ZNF622
ETF1ENSG00000120705.84793.475703665.489000.387004.231602.73880K562AARS
ETF1ENSG00000120705.87132.521409050.91920-0.343703.487002.09760K562ABCF1
ETF1ENSG00000120705.84596.533405673.82180-0.303804.955103.10740K562BCCIP
ETF1ENSG00000120705.84124.456805483.06650-0.4108010.715008.81900K562BCLAF1
ETF1ENSG00000120705.81850.066904604.52160-1.3155033.3957030.56230K562BOP1
ETF1ENSG00000120705.84819.889906304.33490-0.387303.407301.79330K562BUD13
ETF1ENSG00000120705.81601.630302221.13110-0.471802.357901.39980K562CCAR1
ETF1ENSG00000120705.83663.834307004.14880-0.934907.547005.74220K562CNOT7
ETF1ENSG00000120705.86024.903407331.15640-0.283104.442503.01920K562CPEB4
ETF1ENSG00000120705.83216.156804896.03980-0.6063011.287509.68820K562CPSF6
ETF1ENSG00000120705.83174.328704159.72330-0.390006.623504.88500K562CSTF2
ETF1ENSG00000120705.84373.863605096.58600-0.220603.087801.80390K562DDX21
ETF1ENSG00000120705.82752.955503817.74640-0.471706.146904.52420K562DDX3X
ETF1ENSG00000120705.89383.382007586.842200.306506.187805.26750K562DDX47
ETF1ENSG00000120705.86839.075005741.797200.252203.426802.43800K562DKC1
ETF1ENSG00000120705.83537.941104193.22250-0.245103.559202.16930K562EIF2S1
ETF1ENSG00000120705.85380.189407722.02020-0.521305.195504.25430K562EIF2S2
ETF1ENSG00000120705.82966.928803988.51210-0.426905.102903.98630K562EIF4A3
ETF1ENSG00000120705.83143.044904195.67930-0.416705.647603.79130K562EXOSC5
ETF1ENSG00000120705.85465.476106506.04840-0.251402.088201.34760K562FIP1L1
ETF1ENSG00000120705.83338.894704981.38700-0.577208.231006.70990K562FMR1
ETF1ENSG00000120705.82712.980304222.08050-0.638108.244606.57630K562FTO
ETF1ENSG00000120705.87455.960904147.869300.8459034.0276032.03540K562FXR1
ETF1ENSG00000120705.85612.333704152.691000.434503.090102.33570K562G3BP2
ETF1ENSG00000120705.83251.799504674.60280-0.523607.651306.32840K562GPKOW
ETF1ENSG00000120705.86740.4729010291.36520-0.610505.789604.69110K562GRSF1
ETF1ENSG00000120705.82900.246804012.39000-0.468303.438202.78320K562HNRNPC
ETF1ENSG00000120705.82705.303703582.36060-0.405102.979901.79240K562HNRNPF
ETF1ENSG00000120705.86860.629805451.593300.331602.786401.54620K562HNRNPK
ETF1ENSG00000120705.85724.762406856.19730-0.260202.562001.54810K562HNRNPL
ETF1ENSG00000120705.87282.583305351.283700.444504.165803.00790K562HNRNPM
ETF1ENSG00000120705.85036.992906253.53620-0.312104.643003.47920K562HNRNPU
ETF1ENSG00000120705.84335.468505456.44590-0.331802.269001.36610K562IGF2BP2
ETF1ENSG00000120705.82744.738003991.29250-0.540204.424603.21560K562KRR1
ETF1ENSG00000120705.83030.927604562.89610-0.5902010.022408.27840K562METAP2
ETF1ENSG00000120705.84150.342905601.47330-0.4326011.7167010.18160K562MTPAP
ETF1ENSG00000120705.83351.277103982.89260-0.249102.605701.41230K562NCBP2
ETF1ENSG00000120705.84630.435006223.65610-0.4266018.5293016.83140K562NSUN2
ETF1ENSG00000120705.83229.034405062.16140-0.648703.151902.07520K562PABPN1
ETF1ENSG00000120705.86357.474305103.976500.316703.258702.19620K562PCBP2
ETF1ENSG00000120705.86651.263904629.802800.522606.867405.68510K562PRPF8
ETF1ENSG00000120705.82376.100203597.33080-0.598304.541003.34000K562PSIP1
ETF1ENSG00000120705.87570.895705572.842900.442006.853105.84310K562PTBP1
ETF1ENSG00000120705.89158.8531011801.54590-0.365703.158902.13480K562PUM2
ETF1ENSG00000120705.84351.563105073.47870-0.221403.807801.96460K562RPS10
ETF1ENSG00000120705.84490.690303647.329500.300003.099801.95250K562SAFB
ETF1ENSG00000120705.83853.679806141.28490-0.6723020.9492018.88860K562SF3A3
ETF1ENSG00000120705.83222.085404445.38620-0.464304.315903.08290K562SF3B1
ETF1ENSG00000120705.82206.516003110.53920-0.495403.376302.21540K562SRFBP1
ETF1ENSG00000120705.85467.769706291.89030-0.202503.717202.65120K562SRPK2
ETF1ENSG00000120705.87022.529105463.067900.362204.874503.93980K562SRSF1
ETF1ENSG00000120705.83915.942304548.42180-0.216002.816301.63810K562SRSF7
ETF1ENSG00000120705.83161.560904484.08220-0.504202.722501.71450K562SUPV3L1
ETF1ENSG00000120705.85916.137804105.941800.5268010.152708.57670K562SYNCRIP
ETF1ENSG00000120705.84556.929005529.36060-0.279102.191801.55780K562TARDBP
ETF1ENSG00000120705.82274.057303460.14580-0.605605.136403.82440K562TIAL1
ETF1ENSG00000120705.82615.702303674.89730-0.490504.287803.05340K562TRIM56
ETF1ENSG00000120705.85891.701207610.93860-0.369403.671102.01100K562TRIP6
ETF1ENSG00000120705.83235.780904745.13210-0.552303.169102.07630K562UCHL5
ETF1ENSG00000120705.84414.902106599.08120-0.5799021.2762019.51390K562UPF1
ETF1ENSG00000120705.84742.864806363.16610-0.424003.884002.44990K562UTP3
ETF1ENSG00000120705.83895.268505646.61450-0.535709.056407.43470K562WDR3
ETF1ENSG00000120705.86677.638305871.898300.185403.036102.15100K562WDR43
ETF1ENSG00000120705.88116.9744011010.13630-0.439802.982502.08160K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ETF1 is not available on ENCORE database.





11 RBPs can affect the splicing of ETF1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEETF1ENSG00000120705.8chr5-137846253137846291137844369137844505137846733137846889-0.073000.000000.00019excludedK562SF3B4
SEETF1ENSG00000120705.8chr5-1378652431378653671378543801378545561378785211378786250.055000.000140.00542includedHepG2HNRNPK
SEETF1ENSG00000120705.8chr5-137849256137849435137848387137848643137853249137853351-0.088000.000000.00000excludedK562AQR
SEETF1ENSG00000120705.8chr5-137846253137846318137844357137844505137846733137846889-0.113000.000000.00000excludedK562AQR
SEETF1ENSG00000120705.8chr5-1378652431378653671378543801378545561378785211378786250.059000.000030.02678includedK562TBRG4
SEETF1ENSG00000120705.8chr5-1378652431378653671378543801378545561378785211378786250.077000.000330.01705includedK562SF3B1
SEETF1ENSG00000120705.8chr5-137846253137846291137844357137844505137846733137846889-0.068000.000020.00147excludedK562SF3B1
SEETF1ENSG00000120705.8chr5-1378652431378653671378543801378545561378785211378786250.069000.000000.00003includedK562HNRNPK
A3SSETF1ENSG00000120705.8chr5-1378484601378486971378484601378486431378492561378494350.076000.000000.00000longerK562AQR
A3SSETF1ENSG00000120705.8chr5-137844357137844588137844357137844505137846733137846960-0.474000.000040.00041shorterK562AQR
MXEETF1ENSG00000120705.8chr5-137849256137849395137853249137853389137848452137848643137854380137854556-0.098000.000660.016582includedHepG2FTO
MXEETF1ENSG00000120705.8chr5-1378492561378493951378532491378533891378484521378486431378543801378545560.158000.000000.000041includedK562DROSHA
MXEETF1ENSG00000120705.8chr5-1378543801378545561378652431378653671378532491378533891378785211378786250.060000.000440.027001includedK562SF3B1
MXEETF1ENSG00000120705.8chr5-1378462531378463181378467331378468671378443571378445051378471631378472930.083000.000000.000001includedK562AQR
MXEETF1ENSG00000120705.8chr5-1378462531378463181378467331378469601378443571378445051378471631378472930.083000.000000.000001includedK562AQR
MXEETF1ENSG00000120705.8chr5-1378462531378463181378467331378469321378443571378445051378471631378472930.085000.000000.000001includedK562AQR
MXEETF1ENSG00000120705.8chr5-1378462531378463181378467331378469671378443571378445051378471631378472930.089000.000000.000001includedK562AQR
MXEETF1ENSG00000120705.8chr5-1378492561378494571378532491378534131378484601378486431378543801378545560.067000.000000.000001includedK562AQR
MXEETF1ENSG00000120705.8chr5-1378492561378494571378532491378534291378484601378486431378543801378545560.057000.000000.000001includedK562AQR
MXEETF1ENSG00000120705.8chr5-1378492561378494571378532491378534161378484601378486431378543801378545560.051000.000000.000001includedK562AQR
MXEETF1ENSG00000120705.8chr5-1378492561378493951378532491378534131378483871378486431378543801378545560.066000.000000.000001includedK562AQR
MXEETF1ENSG00000120705.8chr5-1378492561378493951378532491378534291378483871378486431378543801378545560.056000.000000.000001includedK562AQR
MXEETF1ENSG00000120705.8chr5-137848452137848686137849256137849395137846792137847293137853249137853351-0.073000.014950.087392includedK562AQR
MXEETF1ENSG00000120705.8chr5-137846733137846932137847163137847293137844357137844505137848452137848643-0.107000.000000.000002includedK562AQR
MXEETF1ENSG00000120705.8chr5-137848452137848643137849256137849395137847163137847293137853249137853389-0.082000.005510.039082includedK562AQR
MXEETF1ENSG00000120705.8chr5-137848452137848697137849256137849395137846792137847293137853249137853351-0.072000.016070.092532includedK562AQR
MXEETF1ENSG00000120705.8chr5-137846733137846889137847163137847293137844357137844505137848452137848643-0.107000.000000.000002includedK562AQR
MXEETF1ENSG00000120705.8chr5-137849256137849395137853249137853389137848452137848643137854380137854556-0.129000.000350.023812includedHepG2BCCIP
MXEETF1ENSG00000120705.8chr5-137844357137844505137846253137846318137843678137844076137846733137846889-0.110000.000890.097902includedK562EIF3G
MXEETF1ENSG00000120705.8chr5-1378471631378472931378484521378486431378467331378468891378492561378493950.091000.001130.057401includedHepG2LARP4
MXEETF1ENSG00000120705.8chr5-137844369137844505137846253137846318137841787137844076137846733137846889-0.067000.000160.004572includedK562SF3B4
MXEETF1ENSG00000120705.8chr5-1378462531378463181378467331378468891378443571378445051378471631378472930.104000.001870.035011includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ETF1 is not avaliable on ENCORE database.