PABPN1

General Information

Gene Name       : PABPN1
Gene ID             : ENSG00000100836.10
Essential Gene : Yes

Functions

Localization(RBPImage: PABPN1)

Domains (AlphaFold: PABPN1)


Antibody Validation

 View validation images for all PABPN1 antibodies

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PABPN1ENSG00000100836.10145.55140.09142.82ENCSR000AEF
HepG2PABPN1ENSG00000100836.10385.34347.79366.56ENCSR985KAT
K562PABPN1ENSG00000100836.10163.48196.47179.97ENCSR000AEO

Assays

2 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
eCLIPeCLIP: 750ENCSR820UYEPABPN1HepG2ReleasedENCAB032ZZRENCSR310WYE  
knockdown followed by RNA-seq PABPN1-BGKLV28-K562ENCSR416ZJHPABPN1K562ReleasedENCSR164MUK   shRNAKD% = 72.2,83.1






  eCLIP  
  RBP    Exp_UID    Cell_Line    ENCODE_ACCESSION    Control_ENCODE_ACCESSION    ENCODE_Antibody_ID    Antibody    Lot_num    Status    Project  
PABPN1750HepG2ENCSR820UYEENCSR310WYEENCAB032ZZRRN023PW1ReleasedENCODE4


  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
PABPN1ENCAB032ZZRRN023PW1Released, ENCODE3BGKLV28-35, Released, ENCODE3
PABPN114154S1Submitted, ENCORE2BGHcLV41-89, Submitted, ENCORE2BGKcLV44-41, Submitting, ENCORE2


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
PABPN1K562shRNAENCSR416ZJHENCSR164MUKPABPN1_BGKLV28-35,PABPN1_BGKLV28-36non-target_BGKLV28-1,non-target_BGKLV28-272.2,83.1ReleasedENCODE3
PABPN1HepG2shRNABGHLV27-41,BGHLV27-42BGHLV27-1,BGHLV27-2NotSatisfiedENCODE3
PABPN1K562CRISPRBGKcLV06-21,BGKcLV06-22BGKcLV06-1,BGKcLV06-2NotSatisfiedENCODE3
PABPN1K562CRISPRBGKcLV37-25,BGKcLV37-26BGKcLV37-1,BGKcLV37-20.0,0.0NotSatisfiedENCORE2
PABPN1K562CRISPRPABPN1-BGKcLV44-41,PABPN1-BGKcLV44-42NT-BGKcLV44-1,NT-BGKcLV44-296.9,96.9SequencedENCORE2
PABPN1K562CRISPRBGKcLV44-43,BGKcLV44-44BGKcLV44-1,BGKcLV44-275.8,67.4NotSatisfiedENCORE2
PABPN1HepG2CRISPRBGHcLV07-21,BGHcLV07-22BGHcLV07-1,BGHcLV07-20.0,0.0NotSatisfiedENCODE3
PABPN1HepG2CRISPRBGHcLV12-55,BGHcLV12-56BGHcLV12-1,BGHcLV12-20.0,0.0NotSatisfiedENCODE4
PABPN1HepG2CRISPRBGHcLV12-57,BGHcLV12-58BGHcLV12-1,BGHcLV12-20.0,0.0NotSatisfiedENCODE4
PABPN1HepG2CRISPRBGHcLV36-21,BGHcLV36-22BGHcLV36-1,BGHcLV36-2NotSatisfiedENCORE2
PABPN1HepG2CRISPRPABPN1-BGHcLV41-89,PABPN1-BGHcLV41-90NT-BGHcLV41-1,NT-BGHcLV41-299.3,98.5SubmittingENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  
    PABPN1: Click to RBP Image Database
  • Nuclei
  • Mutually Exclusive from Nucleolus
  • Speckles
  • Nuclear release mitosis












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    PABPN1Product_ID: RN023PW
    Lot_ID: 1
    Source: MBLI
    Target Name: PABPN1-human    		 HepG2_MBL_RN023PW_001_PABPN1.png<br>Caption: IP-Western Blot analysis of HepG2 whole cell lysate using PABPN1 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 25% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-PABPN1 antibody (lanes under 'PABPN1').
    		 PABPN1_Secondary_Western.png<br>Caption: Western blot following shRNA against PABPN1 in K562 whole cell lysate using PABPN1 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against PABPN1. PABPN1 protein appears as the green band, Tubulin serves as a control and appears in red.
    PABPN1Product_ID: 14154S
    Lot_ID: 1
    Source: Cell Signaling Technology
    Target Name: PABPN1-human    		 PABPN1-HEPG2-CRISPR-14154S.png<br>Caption: Western blot following CRISPR against PABPN1 in HepG2 whole cell lysate using PABPN1 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against PABPN1. PABPN1 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.
    		 CST_14154S_1_PABPN1.png<br>Caption: IP-WB analysis of 14154S whole cell lysate using the PABPN1 specific antibody, 14154S. Lanes 1 and 2 are 2.5% of five million whole cell lysate input and 50% of IP enrichment, respectively, using a normal IgG antibody. Lane 3 is 50% of IP enrichment from five million whole cell lysate using the PABPN1-specific antibody, 14154S. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
    		 PABPN1-K562-CRISPR-14154S.png<br>Caption: Western blot following CRISPR against PABPN1 in K562 whole cell lysate using PABPN1 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against PABPN1. PABPN1 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.








    RNA Targets
    • PABPN1 protein binds to 3,935 RNA regions.  





    Proteins bound to RNA
    • PABPN1 RNA is bound by 61 proteins.  






    PABPN1 protein has 3,935 RNA targets:

    Only display 100 entries as example. Please click "View All" button to see all 3,935 entries.     

    RBP Chr Start End Strand log2(fold change) -log(p-value) Cell Line Matched Gene Matched Area
    PABPN1chr177382500373825065-3.725968.10313HepG2UNC13DCDS,intron-Distal,intron-Proximal
    PABPN1chr168869794988698102+5.211089.45527HepG2ZC3H183'-UTR,CDS,intron-Distal,intron-Proximal
    PABPN1chr9117033023117033041+4.7440215.49707HepG2COL27A13'-UTR,CDS
    PABPN1chr117759491077594997-3.248826.55799HepG2INTS43'-UTR,CDS,intron-Distal
    PABPN1chr16240017240053-4.558827.55078HepG2LUC7L3'-UTR,CDS,intron-Distal,intron-Proximal
    PABPN1chr174700781647007975-3.617674.02339HepG2SNF83'-UTR,CDS,intron-Distal,intron-Proximal
    PABPN1chr13113773102113773172+3.472053.97821HepG2F7CDS
    PABPN1chr191975829219758335-3.259093.28107HepG2ATP13A1CDS,intron-Distal,intron-Proximal
    PABPN1chr142352791223527954-3.613808.97208HepG2ACIN13'-UTR,intron-Distal
    PABPN1chr214574370645743798+3.638689.36213HepG2PFKL3'-UTR,CDS
    PABPN1chr11798237617982388+3.402354.02339HepG2ARHGEF10LCDS
    PABPN1chr153481792334817997-3.432346.72814HepG2GOLGA8A, GOLGA8B3'-UTR,intron-Distal
    PABPN1chr1161090374161090502+3.498684.52386HepG2NIT1CDS,intron-Distal
    PABPN1chr191022576510225806-3.301545.41589HepG2EIF3G3'-UTR,CDS,intron-Distal
    PABPN1chr5176734495176734560-3.748083.05716HepG2MXD33'-UTR,CDS,intron-Distal
    PABPN1chr202520618525206263+3.261717.86028HepG2ENTPD63'-UTR,CDS
    PABPN1chr35010788850107914+4.058825.60462HepG2RBM63'-UTR,5'-UTR,CDS
    PABPN1chr1618190461819091+4.9032913.55713HepG2MAPK8IP33'-UTR
    PABPN1chr142148497321485111-3.496068.15292HepG2NDRG23'-UTR,CDS,intron-Distal,intron-Proximal
    PABPN1chr112294771229563-4.7720312.62807HepG2ACAP3CDS,intron-Distal
    PABPN1chr1185268843185268951-3.690345.33036HepG2IVNS1ABPCDS,intron-Distal
    PABPN1chr3184099283184099310+5.439829.98881HepG2EIF2B5, CHRD3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal
    PABPN1chr3184052534184052626+3.044254.31223HepG2EIF2B5, EIF4G13'-UTR,CDS,intron-Distal
    PABPN1chr206232215662322180+4.534374.52184HepG2RTEL1-TNFRSF6B, RTEL13'-UTR,CDS,intron-Proximal
    PABPN1chr8145619448145619458-5.070155.32242HepG2CPSF1CDS,intron-Distal,intron-Proximal
    PABPN1chr195038611550386150+4.402355.32242HepG2TBC1D173'-UTR,CDS,intron-Proximal
    PABPN1chr125749356057493615-4.556415.32242HepG2STAT63'-UTR,CDS,intron-Distal,intron-Proximal
    PABPN1chr3120347271120347316-3.5794314.86614HepG2HGD3'-UTR,CDS,intron-Distal
    PABPN1chr168408810084088156-3.941593.19682HepG2MBTPS1CDS,intron-Distal
    PABPN1chr77300828173008318-4.0591217.26443HepG2MLXIPL3'-UTR,CDS,intron-Distal
    PABPN1chr168962021189620370+4.2514713.28020HepG2SPG73'-UTR,CDS,intron-Proximal
    PABPN1chr173818607538186112-3.577814.27313HepG2MED243'-UTR,CDS,intron-Distal
    PABPN1chr195667117756671275+3.467826.65788HepG2ZNF444CDS
    PABPN1chr29694358496943686-3.089387.45560HepG2SNRNP200CDS,intron-Distal
    PABPN1chr34972222549722305-4.4993224.37783HepG2MST1, AC099668.5CDS,intron-Distal,intron-Proximal
    PABPN1chr206146097961461017+4.2405221.67969HepG2COL9A3CDS,intron-Proximal
    PABPN1chr1618143871814426+3.5148010.04807HepG2MAPK8IP3CDS
    PABPN1chr7935086935182+3.154866.99093HepG2GET4, SUN13'-UTR
    PABPN1chr174862944848629538+3.933054.02339HepG2SPATA203'-UTR,CDS
    PABPN1chr9117064373117064388+6.0104623.55300HepG2COL27A13'-UTR,CDS
    PABPN1chr1226036640226036666-3.770845.05725HepG2TMEM63ACDS,intron-Distal
    PABPN1chr116403514264035195+4.298094.75108HepG2PLCB33'-UTR,intron-Distal
    PABPN1chr206146028761460303+3.5800211.94161HepG2COL9A3CDS
    PABPN1chr9117044562117044610+5.9976943.85178HepG2COL27A13'-UTR,CDS
    PABPN1chr9117074592117074637+4.3566215.75743HepG2COL27A13'-UTR
    PABPN1chr9140343316140343374-4.3068713.86976HepG2NSMF3'-UTR,intron-Distal
    PABPN1chr206088871860888736-3.367167.22127HepG2LAMA5CDS,intron-Distal,intron-Proximal
    PABPN1chr195618561456185670+3.081546.64396HepG2U2AF23'-UTR
    PABPN1chr7100283686100283701-3.825196.35686HepG2GIGYF1CDS,intron-Distal
    PABPN1chr177999382579993902-3.190343.28107HepG2DCXR3'-UTR,CDS,intron-Distal,intron-Proximal
    PABPN1chr214690070346900750+3.3788215.80601HepG2COL18A1CDS
    PABPN1chr14105239587105239680-3.379607.88741HepG2AKT15'-UTR,CDS,intron-Distal,intron-Proximal
    PABPN1chr64175308741753280+5.3513010.87363HepG2PRICKLE43'-UTR,CDS,intron-Proximal
    PABPN1chr166489806649074+4.605385.03717HepG2ZBTB483'-UTR,CDS
    PABPN1chr168981143089811480-4.0412410.61672HepG2FANCA3'-UTR,CDS,intron-Distal,intron-Proximal
    PABPN1chr2234371312234371379+3.435914.27313HepG2DGKD3'-UTR,CDS
    PABPN1chr193995992439959969+3.515325.64190HepG2SUPT5HCDS
    PABPN1chr434509633450991+3.6098712.37971HepG2HGFACCDS,intron-Proximal
    PABPN1chr77301097073011017-3.5624210.42711HepG2MLXIPLCDS,intron-Distal,intron-Proximal
    PABPN1chr34901908949019162+4.217864.18170HepG2ARIH23'-UTR,CDS,intron-Proximal
    PABPN1chr63191937031919380+3.205216.83494HepG2CFBCDS
    PABPN1chr166718223967182294+3.933056.43352HepG2C16orf703'-UTR
    PABPN1chr10135216194135216257+3.279495.30074HepG2RP11-108K14.8, MTG1CDS,intron-Proximal
    PABPN1chr173019043030190536-3.360863.52724HepG2UTP63'-UTR,CDS,intron-Distal
    PABPN1chr206146856161468615+3.3046619.72444HepG2COL9A3CDS
    PABPN1chr9116997909116997923+4.8690220.80915HepG2COL27A15'-UTR,CDS
    PABPN1chr11941263819412690-3.521828.15292HepG2UBR4CDS,intron-Distal,intron-Proximal
    PABPN1chr54328958643289660-3.136358.97935HepG2HMGCS13'-UTR,intron-Distal
    PABPN1chr193943257739432658-3.583645.05725HepG2CTC-360G5.8, SARS2, FBXO173'-UTR,intron-Distal
    PABPN1chr8145151069145151095+3.434937.20941HepG2CYC1CDS
    PABPN1chr174026580840265861-3.6688617.15208HepG2KAT2A3'-UTR,CDS,intron-Distal
    PABPN1chr116781761267817710+5.1348222.63963HepG2TCIRG1CDS
    PABPN1chr11940105619401215-3.8350121.52738HepG2UBR43'-UTR,intron-Distal,intron-Proximal
    PABPN1chr117194930571949373+5.9927715.30419HepG2INPPL13'-UTR,CDS,intron-Distal,intron-Proximal
    PABPN1chr1771276507127685+3.9667815.82950HepG2ACADVL3'-UTR,CDS
    PABPN1chr63316203933162107-4.029383.89860HepG2RXRB3'-UTR,intron-Distal
    PABPN1chr1999600649960209+4.683295.32242HepG2PIN13'-UTR,intron-Distal,intron-Proximal
    PABPN1chr161624379316243846-3.966614.27313HepG2ABCC63'-UTR,intron-Distal
    PABPN1chr204457895544579012-4.094023.19682HepG2ZNF335CDS,intron-Distal,intron-Proximal
    PABPN1chr63149855431498571-3.4729421.54003HepG2DDX39B, ATP6V1G2-DDX39B3'-UTR,CDS,intron-Distal,intron-Proximal
    PABPN1chr173815381638153942+3.029385.26640HepG2PSMD33'-UTR,CDS,intron-Distal
    PABPN1chr172687385426873997-4.153344.25576HepG2UNC119, RP11-192H23.43'-UTR,intron-Distal
    PABPN1chr15337351653373620-3.745304.51483HepG2ECHDC23'-UTR,CDS,intron-Distal,intron-Proximal
    PABPN1chr195004237650042400+3.860864.77549HepG2RCN3CDS,intron-Distal
    PABPN1chr214574478045744800+3.031604.39148HepG2PFKL3'-UTR,CDS
    PABPN1chr203998866839988780+4.1579020.31343HepG2LPIN33'-UTR
    PABPN1chr1748490484849126-3.9693410.22494HepG2PFN13'-UTR,intron-Distal
    PABPN1chr34860289148602920-3.975368.10313HepG2COL7A1CDS,intron-Distal
    PABPN1chr194961131949611369+4.5476224.53946HepG2SNRNP703'-UTR,CDS
    PABPN1chr162233653722336586+3.105383.18660HepG2POLR3E3'-UTR,CDS
    PABPN1chr142353057623530595-3.314778.10252HepG2ACIN1CDS,intron-Distal
    PABPN1chr116639451266394608+3.6853110.75028HepG2RBM14, RBM4, RBM14-RBM43'-UTR,intron-Distal
    PABPN1chr7100218149100218222-3.830719.20230HepG2TFR23'-UTR,intron-Distal
    PABPN1chr77301004273010091-4.9411223.16124HepG2MLXIPL3'-UTR,CDS,intron-Distal,intron-Proximal
    PABPN1chr14076920140769279-5.1409923.47504HepG2COL9A2CDS,intron-Distal,intron-Proximal
    PABPN1chr8145655812145655882-4.821863.99014HepG2TONSLCDS,intron-Distal
    PABPN1chr8145618907145618964-4.472058.22830HepG2CPSF1CDS,intron-Distal,intron-Proximal
    PABPN1chr203980404639804071+4.7081518.59854HepG2PLCG13'-UTR,intron-Distal
    PABPN1chr174605862046058649+3.9770311.90605HepG2CDK5RAP33'-UTR,CDS
    PABPN1chr34860394248603997-4.6475211.53552HepG2COL7A1CDS,intron-Distal,intron-Proximal




    61 proteins are bound to PABPN1 RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr142379529423795328+3'-UTR3.4731225.99688K562DDX6
    chr142379525923795279+3'-UTR3.540249.05066K562U2AF2
    chr142379530423795345+3'-UTR3.308575.24860HepG2FUBP3
    chr142379505823795124+3'-UTR3.3576943.35167K562U2AF2
    chr142379488123794971+3'-UTR3.5233422.66720HepG2PCBP1
    chr142379494223794985+3'-UTR4.3171644.14925HepG2PABPN1
    chr142379524623795259+3'-UTR3.7774711.83225K562U2AF2
    chr142379351523793521+3'-UTR,5'-UTR,intron-Proximal4.23593400.00000HepG2PRPF8
    chr142379484923794858+3'-UTR3.6270321.84315HepG2PABPN1
    chr142379467223794710+3'-UTR3.4520940.41994K562U2AF2
    chr142379449723794547+3'-UTR3.8249212.28296K562PUM2
    chr142379444423794494+3'-UTR,CDS,intron-Proximal3.8492073.92819HepG2U2AF1
    chr142379505823795132+3'-UTR3.67200400.00000HepG2U2AF2
    chr142379349623793509+3'-UTR,5'-UTR,CDS,intron-Proximal4.28594400.00000HepG2PRPF8
    chr142379436823794422+3'-UTR,intron-Proximal4.6261234.67751HepG2SF3B4
    chr142379529523795346+3'-UTR4.2008118.27496K562GTF2F1
    chr142379529923795337+3'-UTR3.150977.33463K562ZC3H11A
    chr142379457523794600+3'-UTR5.8829414.78848K562PABPC4
    chr142379465123794672+3'-UTR3.0654715.46890K562U2AF2
    chr142379461423794671+3'-UTR4.9007063.79140HepG2PABPN1
    chr142379472623794745+3'-UTR4.3137727.67998HepG2PABPN1
    chr142379460923794667+3'-UTR5.23109400.00000K562PABPC4
    chr142379489523794942+3'-UTR3.9742261.63590HepG2PABPN1
    chr142379464423794668+3'-UTR3.4786436.24373K562DDX6
    chr142379396923793996+3'-UTR,intron-Distal4.0894410.62239K562PRPF8
    chr142379461723794667+3'-UTR3.0949319.63498K562FAM120A
    chr142379462723794652+3'-UTR3.1281812.80369HepG2BCLAF1
    chr142379465723794720+3'-UTR3.3650017.81684K562APOBEC3C
    chr142379358823793649+3'-UTR,intron-Distal,intron-Proximal3.9925611.49378HepG2SF3B4
    chr142379442723794450+3'-UTR,intron-Proximal4.67436400.00000HepG2U2AF2
    chr142379378023793825+3'-UTR,intron-Distal3.031478.28992K562EFTUD2
    chr142379512423795142+3'-UTR3.6353213.26995K562U2AF2
    chr142379461923794664+3'-UTR3.0245212.98334HepG2LARP4
    chr142379485023794865+3'-UTR3.0503645.72081HepG2U2AF2
    chr142379461723794657+3'-UTR3.9164213.33393K562APOBEC3C
    chr142379529423795343+3'-UTR3.089356.46691K562UPF1
    chr142379524023795266+3'-UTR4.8913421.42472K562U2AF1
    chr142379530623795345+3'-UTR5.8336115.45044K562TIA1
    chr142379462623794650+3'-UTR3.2716710.11371K562U2AF2
    chr142379526623795284+3'-UTR4.3521517.69348K562U2AF1
    chr142379461823794669+3'-UTR3.6907229.88154K562DDX55
    chr142379444323794494+3'-UTR,CDS,intron-Proximal4.3357576.50973K562U2AF2
    chr142379485823794893+3'-UTR3.9638142.92760HepG2PABPN1
    chr142379462123794644+3'-UTR4.0272223.35488K562DDX6
    chr142379508623795120+3'-UTR3.3429521.28334HepG2PABPN1
    chr142379467123794705+3'-UTR4.5220262.57419HepG2PABPN1
    chr142379437323794438+3'-UTR,intron-Proximal3.8549038.31521K562SF3B4
    chr142379522823795286+3'-UTR4.3355710.16258K562APOBEC3C
    chr142379396623793979+3'-UTR,intron-Distal3.028023.79336HepG2HNRNPA1
    chr142379345923793514+3'-UTR,5'-UTR,CDS,intron-Proximal3.3885032.75419HepG2GRWD1
    chr142379449923794542+3'-UTR4.3764612.73277K562APOBEC3C
    chr142379531323795337+3'-UTR3.467545.71838K562NOLC1
    chr142379515823795186+3'-UTR3.308209.82218K562U2AF1
    chr142379532823795344+3'-UTR3.4999719.81947K562DDX6
    chr142379466623794700+3'-UTR3.0576513.35187K562LSM11
    chr142379444423794492+3'-UTR,CDS,intron-Proximal4.2138948.65367K562U2AF1
    chr142379443823794490+3'-UTR,CDS,intron-Proximal3.7239830.83476K562SF3B4
    chr142379488423794970+3'-UTR3.15252400.00000HepG2PCBP2
    chr142379466723794727+3'-UTR3.4224029.36961K562PABPC4
    chr142379470123794746+3'-UTR3.9577942.19344K562U2AF1
    chr142379477523794800+3'-UTR4.8028221.51095HepG2PABPN1
    chr142379463123794672+3'-UTR3.6341917.48778K562U2AF1
    chr142379445023794500+3'-UTR,CDS,intron-Proximal4.47537400.00000HepG2U2AF2
    chr142379436423794415+3'-UTR,intron-Proximal3.1496711.40741K562U2AF2
    chr142379467223794701+3'-UTR4.1101639.73356K562U2AF1
    chr142379465023794767+3'-UTR3.17890400.00000HepG2U2AF2
    chr142379529923795345+3'-UTR3.7375611.99332K562UCHL5
    chr142379474523794775+3'-UTR4.7925627.40110HepG2PABPN1
    chr142379471023794748+3'-UTR3.4681533.40256K562U2AF2
    chr142379480023794812+3'-UTR3.305656.55799HepG2PABPN1
    chr142379504923795086+3'-UTR3.9202427.58004HepG2PABPN1
    chr142379467423794698+3'-UTR3.1362531.60523HepG2U2AF1
    chr142379529823795339+3'-UTR4.4675011.72794K562APOBEC3C
    chr142379469823794719+3'-UTR3.2755135.02534HepG2U2AF1
    chr142379352123793542+3'-UTR,5'-UTR,intron-Proximal3.60756400.00000HepG2PRPF8
    chr142379113223791199+5'-UTR,intron-Distal6.4767137.95241K562GTF2F1
    chr142379133323791355+5'-UTR,intron-Proximal4.344745.07796HepG2SF3B4
    chr142379112623791199+5'-UTR,intron-Distal,intron-Proximal3.5600824.18682HepG2RBFOX2
    chr142379116023791189+5'-UTR,intron-Distal5.3984138.26304HepG2PRPF4
    chr142379083823790886+5'-UTR,CDS,intron-Distal3.3911015.87648K562UCHL5
    chr142379127023791319+5'-UTR,intron-Distal,intron-Proximal4.285199.14335K562EFTUD2
    chr142379139023791455+5'-UTR,CDS3.364794.89603K562TRA2A
    chr142379112723791190+5'-UTR,intron-Distal,intron-Proximal3.209845.70670HepG2SUPV3L1
    chr142379113423791179+5'-UTR,intron-Distal3.420754.16067K562XRCC6
    chr142379097823791021+5'-UTR,CDS,intron-Distal3.036745.55239K562DDX55
    chr142379079723790808+5'-UTR,CDS,intron-Distal4.6488068.88482HepG2PRPF4
    chr142379131223791316+5'-UTR,intron-Proximal4.237473.55086HepG2RBM5
    chr142379060723790637+5'-UTR,intron-Distal3.3976815.44574HepG2CSTF2T
    chr142379113523791182+5'-UTR,intron-Distal3.7287610.41791HepG2FASTKD2
    chr142379097923791030+5'-UTR,CDS,intron-Distal,intron-Proximal3.4930513.92310K562DDX24
    chr142379089423790957+5'-UTR,CDS,intron-Distal3.219936.40885K562SRSF1
    chr142379076823790797+5'-UTR,CDS,intron-Distal4.4569762.13907HepG2PRPF4
    chr142379125623791272+5'-UTR,intron-Distal3.5602214.25878HepG2PRPF4
    chr142379077223790836+5'-UTR,CDS,intron-Distal3.3954340.77653K562GEMIN5
    chr142379114923791172+5'-UTR,intron-Distal3.646866.06579K562DROSHA
    chr142379098823791060+5'-UTR,CDS,intron-Distal,intron-Proximal3.3793711.85223HepG2GTF2F1
    chr142379072223790753+5'-UTR,CDS,intron-Distal3.605656.23662HepG2NCBP2
    chr142379077023790843+5'-UTR,CDS,intron-Distal3.4504863.68123HepG2EFTUD2
    chr142379102923791069+5'-UTR,intron-Distal,intron-Proximal3.0952023.79336HepG2PRPF8
    chr142379063723790659+5'-UTR,intron-Distal3.195018.85010HepG2CSTF2T
    chr142379081523790823+5'-UTR,CDS,intron-Distal4.8683063.03860HepG2PRPF4
    chr142379098223791018+5'-UTR,CDS,intron-Distal3.9231311.87877K562DDX6
    chr142379088823790919+5'-UTR,CDS,intron-Distal3.3734226.51847HepG2PRPF4
    chr142379132623791370+5'-UTR,intron-Proximal4.1659722.63373HepG2SF3A3
    chr142379077523790838+5'-UTR,CDS,intron-Distal3.0722925.82481HepG2NCBP2
    chr142379126223791326+5'-UTR,intron-Distal,intron-Proximal4.9037516.09300HepG2AQR
    chr142379083723790876+5'-UTR,CDS,intron-Distal3.6601947.41358HepG2PRPF4
    chr142379083323790894+5'-UTR,CDS,intron-Distal3.4930813.62359K562SRSF1
    chr142379076723790815+5'-UTR,CDS,intron-Distal3.6317329.55440HepG2GTF2F1
    chr142379084323790884+5'-UTR,CDS,intron-Distal3.3143044.46760HepG2EFTUD2
    chr142379112823791206+5'-UTR,intron-Distal,intron-Proximal4.4435847.90844HepG2CSTF2T
    chr142379091923790954+5'-UTR,CDS,intron-Distal4.2540923.31553HepG2PRPF4
    chr142379082323790830+5'-UTR,CDS,intron-Distal4.5867253.60323HepG2PRPF4
    chr142379097523791043+5'-UTR,CDS,intron-Distal,intron-Proximal3.5225725.11393HepG2PRPF4
    chr142379114323791180+5'-UTR,intron-Distal3.5270127.47616HepG2PRPF8
    chr142379089323790956+5'-UTR,CDS,intron-Distal3.8495923.56631K562DDX24
    chr142379140123791445+5'-UTR,CDS3.2533223.92129HepG2BCLAF1
    chr142379083023790837+5'-UTR,CDS,intron-Distal4.1619535.74963HepG2PRPF4
    chr142379113023791204+5'-UTR,intron-Distal4.8132475.61071HepG2FAM120A
    chr142379138923791401+5'-UTR,CDS,intron-Proximal3.2250916.60490HepG2BCLAF1
    chr142379114223791184+5'-UTR,intron-Distal4.0702113.77836K562PRPF8
    chr142379113723791186+5'-UTR,intron-Distal3.838864.23488K562FAM120A
    chr142379113323791195+5'-UTR,intron-Distal4.3648524.34534K562AQR
    chr142379097723791038+5'-UTR,CDS,intron-Distal,intron-Proximal3.731093.25119K562SRSF7
    chr142379080823790815+5'-UTR,CDS,intron-Distal4.9491966.16613HepG2PRPF4
    chr142379130623791325+5'-UTR,intron-Proximal4.0175923.13327HepG2RBFOX2
    chr142379099523791031+5'-UTR,CDS,intron-Distal,intron-Proximal3.381067.41559HepG2FTO
    chr142379119923791250+5'-UTR,intron-Distal3.894209.25963K562CSTF2T
    chr142379127323791294+5'-UTR,intron-Distal,intron-Proximal3.3261114.68626HepG2PRPF4
    chr142379077723790850+5'-UTR,CDS,intron-Distal3.6262849.89626K562DDX24
    chr142379113523791180+5'-UTR,intron-Distal3.638554.34492K562XRN2
    chr142379114923791169+5'-UTR,intron-Distal3.631543.01619K562FUS
    chr142379113323791160+5'-UTR,intron-Distal5.8875658.27825HepG2PRPF4
    chr142379078323790831+5'-UTR,CDS,intron-Distal3.1286413.84980K562DDX55
    chr142379139923791500+5'-UTR,CDS3.2184336.20247K562UCHL5
    chr142379113623791192+5'-UTR,intron-Distal3.476937.59237K562GPKOW
    chr142379114023791178+5'-UTR,intron-Distal4.0008511.58182K562RBFOX2
    chr142379113023791197+5'-UTR,intron-Distal5.5379546.09050HepG2GTF2F1
    chr142379103823791069+5'-UTR,intron-Distal,intron-Proximal3.6221813.16341HepG2CSTF2T
    chr142379081523790887+5'-UTR,CDS,intron-Distal3.0548918.64660HepG2GTF2F1
    chr142379113823791199+5'-UTR,intron-Distal4.4633035.34324HepG2EFTUD2
    chr142379113823791179+5'-UTR,intron-Distal3.426927.20348K562AKAP8L
    chr142379113323791199+5'-UTR,intron-Distal4.7519925.98184K562CSTF2T
    chr142379113223791185+5'-UTR,intron-Distal4.4182324.33953K562FASTKD2
    chr142379069523790754+5'-UTR,CDS,intron-Distal3.089633.30696HepG2FKBP4
    chr142379088423790952+5'-UTR,CDS,intron-Distal3.0726544.87700HepG2EFTUD2
    chr142379125023791312+5'-UTR,intron-Distal,intron-Proximal3.1738410.56819K562CSTF2T
    chr142379113123791187+5'-UTR,intron-Distal5.4598742.79843HepG2PCBP2
    chr142379127023791306+5'-UTR,intron-Distal,intron-Proximal3.5025124.02687HepG2RBFOX2
    chr142379075723790836+5'-UTR,CDS,intron-Distal3.4894025.81810HepG2GRSF1
    chr142379085023790893+5'-UTR,CDS,intron-Distal3.3607121.29879K562DDX24
    chr142379115523791178+5'-UTR,intron-Distal3.658286.88827HepG2CDC40
    chr142379113023791133+5'-UTR,intron-Distal4.8825715.90329HepG2PRPF4
    chr142379226523792275+CDS4.2595064.01808HepG2PPIG
    chr142379222423792261+CDS3.1927924.02562K562ZNF622
    chr142379258423792591+CDS,intron-Proximal3.9529422.21610K562ZNF622
    chr142379146223791499+CDS3.7567468.37447HepG2PPIG
    chr142379226423792275+CDS3.7637921.37503K562UCHL5
    chr142379254523792613+CDS,intron-Proximal4.0386722.86236K562AQR
    chr142379226023792328+CDS,intron-Proximal3.8346617.27097K562AQR
    chr142379149323791504+CDS3.0743315.18863HepG2GRWD1
    chr142379256723792607+CDS,intron-Proximal3.442233.99122K562SMNDC1
    chr142379225823792276+CDS,intron-Proximal3.7284819.52487K562DDX24
    chr142379221323792221+CDS4.0321854.74780HepG2PPIG
    chr142379220723792214+CDS,intron-Proximal3.8859515.24749K562UCHL5
    chr142379258523792627+CDS,intron-Proximal3.9184951.05289HepG2BCLAF1
    chr142379265023792691+CDS3.4079220.48251HepG2PPIG
    chr142379220923792231+CDS3.054459.58319HepG2SDAD1
    chr142379258523792628+CDS,intron-Proximal3.5562621.40110K562UCHL5
    chr142379258223792615+CDS,intron-Proximal3.7206542.39655HepG2BUD13
    chr142379267123792692+CDS3.1399914.35254HepG2GRWD1
    chr142379268723792692+CDS3.5423524.41111HepG2BCLAF1
    chr142379220723792221+CDS,intron-Proximal3.4018113.86723K562DDX24
    chr142379144723791504+CDS4.1204415.41602HepG2UCHL5
    chr142379142423791444+CDS3.3209231.05909HepG2PPIG
    chr142379148223791502+CDS3.497646.32662HepG2ZNF800
    chr142379344723793459+CDS4.1240016.15664HepG2GRWD1
    chr142379259123792629+CDS3.5341023.67921K562ZNF622
    chr142379222123792258+CDS3.9407325.50801K562DDX24
    chr142379264223792687+CDS3.7360543.87769HepG2BCLAF1
    chr142379263923792691+CDS3.1223814.28442K562UCHL5
    chr142379223623792259+CDS4.4825586.48569HepG2PPIG
    chr142379144423791493+CDS3.5268622.97782HepG2GRWD1
    chr142379225923792265+CDS4.5219175.30082HepG2PPIG
    chr142379322223793255+CDS3.0587315.16701HepG2GRWD1
    chr142379220723792221+CDS,intron-Proximal3.3243115.13612K562ZNF622
    chr142379221923792275+CDS3.8248913.34228HepG2UCHL5
    chr142379220723792215+CDS,intron-Proximal3.4397025.18971HepG2BCLAF1
    chr142379220623792213+CDS,intron-Proximal3.7913946.85248HepG2PPIG
    chr142379262123792671+CDS3.5508820.45433HepG2GRWD1
    chr142379221523792275+CDS4.0753479.61027HepG2BCLAF1
    chr142379348923793496+CDS4.39041400.00000HepG2PRPF8
    chr142379226123792276+CDS,intron-Proximal3.8010428.50114K562ZNF622
    chr142379258523792619+CDS,intron-Proximal3.2414010.45216HepG2ZNF800
    chr142379264823792681+CDS4.2837311.64917HepG2ZNF800
    chr142379071223790750+CDS,intron-Distal3.6370410.13027HepG2GTF2F1
    chr142379149923791504+CDS3.7690843.11823HepG2PPIG
    chr142379258523792617+CDS,intron-Proximal4.7434553.88830HepG2PPIG
    chr142379223623792270+CDS3.204094.28667HepG2WDR43
    chr142379222623792236+CDS4.2843973.59310HepG2PPIG
    chr142379219923792232+CDS,intron-Proximal3.612606.80591K562U2AF2
    chr142379222123792275+CDS3.2868634.66829HepG2GRWD1
    chr142379264623792664+CDS3.914473.67596K562GRWD1
    chr142379144423791504+CDS3.5254937.12168K562ZNF622
    chr142379144423791504+CDS3.3980623.67524K562DDX24
    chr142379265023792686+CDS5.0832714.86352K562DDX24
    chr142379220723792219+CDS,intron-Proximal3.930098.10777HepG2UCHL5
    chr142379262623792670+CDS4.2247510.73841HepG2UCHL5
    chr142379223123792275+CDS3.1514812.92672HepG2SDAD1
    chr142379256223792618+CDS,intron-Proximal3.0470116.91507K562BUD13
    chr142379220723792225+CDS,intron-Proximal3.4991610.39980HepG2ZNF800
    chr142379317323793197+CDS,intron-Proximal3.6212228.44330HepG2BCLAF1
    chr142379222123792226+CDS4.0397054.98338HepG2PPIG
    chr142379149223791505+CDS,intron-Proximal3.452316.51752K562PABPC4
    chr142379258523792615+CDS,intron-Proximal3.9203411.84452HepG2UCHL5
    chr142379317323793195+CDS,intron-Proximal3.1411313.25242HepG2GRWD1
    chr142379150023791504+CDS4.0571115.56303K562UCHL5
    chr142379222523792255+CDS3.1575212.04961HepG2ZNF800
    chr142379346823793489+CDS4.27022400.00000HepG2PRPF8
    chr142379221423792264+CDS3.9398033.13939K562UCHL5
    chr142379144723791504+CDS3.6062738.08695HepG2BCLAF1
    chr142379258523792621+CDS,intron-Proximal3.6626527.28242HepG2GRWD1
    chr142379258523792616+CDS,intron-Proximal3.3435415.25229K562DDX24
    chr142379340723793441+CDS3.003795.30447K562RBM15
    chr142379251923792614+CDS,intron-Proximal3.4640127.61461HepG2AQR
    chr142379223723792265+CDS3.0547212.16826HepG2PRPF4
    chr142379258323792621+CDS,intron-Proximal4.074468.22023K562RBFOX2
    chr142379237923792427+intron-Distal5.7290510.68826HepG2AQR
    chr142379154723791607+intron-Distal,intron-Proximal3.221168.64388HepG2RBM22
    chr142379272223792814+intron-Distal,intron-Proximal4.2790310.39396K562KHSRP
    chr142379155623791639+intron-Distal,intron-Proximal4.5884533.33920K562EFTUD2
    chr142379153323791668+intron-Distal,intron-Proximal3.572578.13921K562KHSRP
    chr142379156023791630+intron-Distal,intron-Proximal4.4521517.79841K562PRPF8
    chr142379237423792455+intron-Distal,intron-Proximal3.7163818.43825K562AQR
    chr142379166823791792+intron-Distal3.281508.86655K562KHSRP
    chr142379154123791628+intron-Distal,intron-Proximal5.2575167.48258HepG2EFTUD2
    chr142379239523792458+intron-Distal4.550816.40042K562EFTUD2
    chr142379278323792805+intron-Distal,intron-Proximal3.424393.29341HepG2HNRNPUL1
    chr142379251423792554+intron-Proximal4.789235.07796HepG2SF3B4
    chr142379256723792582+intron-Proximal4.9153229.93442HepG2BUD13
    chr142379253623792580+intron-Proximal4.5529912.20473K562SF3B4
    chr142379157523791598+intron-Proximal4.687127.50107K562AQR
    chr142379228023792316+intron-Proximal3.9188118.66226HepG2PRPF8
    chr142379232823792374+intron-Proximal5.2380414.28850K562AQR
    chr142379154423791602+intron-Proximal3.6543110.63321HepG2RBFOX2
    chr142379253723792575+intron-Proximal4.236505.85201K562PRPF8
    chr142379329323793339+intron-Proximal4.290679.73169K562SF3B4
    chr142379250823792523+intron-Proximal3.587105.35619K562AQR
    chr142379155923791599+intron-Proximal3.698933.30889K562GTF2F1
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    The PABPN1 protein binds to its own RNA.

    RBP Chr Start End Strand log2(fold change) -log(p-value) Cell Line Matched Gene Matched Area
    PABPN1chr142379494223794985+4.3171644.14925HepG2PABPN13'-UTR
    PABPN1chr142379484923794858+3.6270321.84315HepG2PABPN13'-UTR
    PABPN1chr142379461423794671+4.9007063.79140HepG2PABPN13'-UTR
    PABPN1chr142379472623794745+4.3137727.67998HepG2PABPN13'-UTR
    PABPN1chr142379489523794942+3.9742261.63590HepG2PABPN13'-UTR
    PABPN1chr142379485823794893+3.9638142.92760HepG2PABPN13'-UTR
    PABPN1chr142379508623795120+3.3429521.28334HepG2PABPN13'-UTR
    PABPN1chr142379467123794705+4.5220262.57419HepG2PABPN13'-UTR
    PABPN1chr142379477523794800+4.8028221.51095HepG2PABPN13'-UTR
    PABPN1chr142379474523794775+4.7925627.40110HepG2PABPN13'-UTR
    PABPN1chr142379480023794812+3.305656.55799HepG2PABPN13'-UTR
    PABPN1chr142379504923795086+3.9202427.58004HepG2PABPN13'-UTR


    Diffrential Expression
    • 3,359 differentially expressed genes after Knockdown/Knockout PABPN1 protein.  





    • 84 RBPs can affect the levels of PABPN1.  







    3,359 differentially expressed genes after Knockdown/Knockout PABPN1 protein :

    Only display 100 entries as example. Please click "View All" button to see all 3,359 entries.     

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    GCLCENSG00000001084.6716.52780434.552100.721402.861201.84890K562PABPN1
    KRIT1ENSG00000001631.10757.048001470.17500-0.957505.874004.27160K562PABPN1
    BADENSG00000002330.9148.6762059.826201.313204.289502.98570K562PABPN1
    LASP1ENSG00000002834.138121.800704324.608100.909105.534803.99970K562PABPN1
    CFLARENSG00000003402.15955.222801658.05900-0.795604.141502.86700K562PABPN1
    NDUFAF7ENSG00000003509.11325.41530514.28620-0.660302.463801.54310K562PABPN1
    RBM5ENSG00000003756.123253.278402165.211700.587302.618401.66210K562PABPN1
    ARF5ENSG00000004059.63481.983702380.165600.548702.442801.52640K562PABPN1
    PLXND1ENSG00000004399.8864.96370521.585800.729603.145302.07000K562PABPN1
    ARHGAP33ENSG00000004777.14971.87600539.089600.850104.173102.89200K562PABPN1
    PDK4ENSG00000004799.771.0886026.573701.419502.988901.94920K562PABPN1
    SLC4A1ENSG00000004939.9341.37350119.628401.512707.899005.91930K562PABPN1
    DVL2ENSG00000004975.71082.24510657.551000.718802.966601.93110K562PABPN1
    UPF1ENSG00000005007.83645.155602149.974300.761604.103702.83760K562PABPN1
    SLC25A5ENSG00000005022.59634.485306564.642800.553402.424101.51090K562PABPN1
    DHX33ENSG00000005100.8258.01580482.12200-0.901904.090902.82790K562PABPN1
    LIG3ENSG00000005156.71270.746502332.83160-0.876402.546501.60720K562PABPN1
    RPAP3ENSG00000005175.51339.347702416.69860-0.851504.779903.38000K562PABPN1
    FAM214BENSG00000005238.15352.89940163.714601.108004.809503.40220K562PABPN1
    CREBBPENSG00000005339.81849.649601243.860700.572302.256801.38020K562PABPN1
    WDR54ENSG00000005448.12255.9530091.968601.476603.908902.67740K562PABPN1
    ZNF195ENSG00000005801.12321.21150906.62940-1.4970011.225008.76110K562PABPN1
    GDE1ENSG00000006007.72177.255701414.140600.622502.538101.60100K562PABPN1
    OSBPL7ENSG00000006025.7802.87570354.636601.178707.041205.21980K562PABPN1
    AP2B1ENSG00000006125.1213747.061708933.186200.621802.888001.87080K562PABPN1
    SPATA20ENSG00000006282.15102.9268051.108201.009902.157001.30440K562PABPN1
    TNFRSF12AENSG00000006327.9180.8789075.551001.259404.129302.85790K562PABPN1
    ETV1ENSG00000006468.9290.00420646.99270-1.157706.513704.79970K562PABPN1
    SCINENSG00000006747.10619.829701129.08830-0.865202.404701.49560K562PABPN1
    PNPLA4ENSG00000006757.7651.55160373.773000.801603.327202.21300K562PABPN1
    TRAPPC6AENSG00000007255.6277.27650161.271200.781702.771801.77990K562PABPN1
    SCN4AENSG00000007314.720.9250077.70590-1.892804.473803.13290K562PABPN1
    TKTL1ENSG00000007350.1292.1338023.439601.974705.293403.80050K562PABPN1
    RHBDF1ENSG00000007384.11837.92620260.473801.6856012.209709.61020K562PABPN1
    BAIAP3ENSG00000007516.9240.96020136.336700.821502.727701.74660K562PABPN1
    DNAJC11ENSG00000007923.111083.414402530.97240-1.224103.212202.12330K562PABPN1
    MYLIPENSG00000007944.102032.00850934.816101.120107.031805.21170K562PABPN1
    MPNDENSG00000008382.11171.0252069.213001.305004.663403.28620K562PABPN1
    CRY1ENSG00000008405.71763.60610970.848600.861104.637303.26440K562PABPN1
    MED24ENSG00000008838.132958.777901749.817900.757703.937502.70060K562PABPN1
    BAZ1BENSG00000009954.66286.583409889.50660-0.653602.834501.82900K562PABPN1
    DYRK4ENSG00000010219.9261.07010125.505301.056603.830602.61250K562PABPN1
    UQCRC1ENSG00000010256.64537.030902648.229700.776604.362803.04510K562PABPN1
    NCAPD2ENSG00000010292.87844.494804100.024800.935905.193603.71960K562PABPN1
    PHF7ENSG00000010318.15170.11200281.72570-0.727802.276001.39530K562PABPN1
    STAB1ENSG00000010327.6131.2600066.739000.975702.587801.63810K562PABPN1
    ZNF200ENSG00000010539.7108.52450232.18890-1.097302.395401.48810K562PABPN1
    LYPLA2ENSG00000011009.61451.50510777.601200.900304.930403.50170K562PABPN1
    ABHD5ENSG00000011198.31754.10500861.896501.025002.929101.90170K562PABPN1
    AKAP8LENSG00000011243.134725.127503289.695300.522302.223401.35620K562PABPN1
    MBTD1ENSG00000011258.11440.40880889.90370-1.014805.766404.18400K562PABPN1
    PTBP1ENSG00000011304.1212053.539206616.887800.865104.114202.84610K562PABPN1
    LARS2ENSG00000011376.5681.304901077.20210-0.660902.836101.83020K562PABPN1
    ANLNENSG00000011426.64303.154802294.742800.907005.048703.59940K562PABPN1
    BRCA1ENSG00000012048.15841.901603421.26940-2.022807.051805.22800K562PABPN1
    MBTPS2ENSG00000012174.7289.52750496.49830-0.778103.164702.08630K562PABPN1
    EXTL3ENSG00000012232.4815.34480467.433100.802603.782802.57450K562PABPN1
    PSMC4ENSG00000013275.32507.163401354.762400.887904.983703.54460K562PABPN1
    SLC25A39ENSG00000013306.116458.303502427.943401.4113012.108509.53700K562PABPN1
    MVPENSG00000013364.1448.2589014.837401.701502.888301.87080K562PABPN1
    RWDD2AENSG00000013392.664.22510164.16480-1.353904.680803.30060K562PABPN1
    CLK1ENSG00000013441.112911.686701434.811101.020906.665204.92900K562PABPN1
    POLR3BENSG00000013503.5422.86850794.16510-0.909204.627203.25670K562PABPN1
    TACC3ENSG00000013810.145111.964202960.631300.787904.537403.18420K562PABPN1
    UFL1ENSG00000014123.9910.683101764.56350-0.954305.905404.29410K562PABPN1
    POLA2ENSG00000014138.4696.816401047.97310-0.588802.388801.48300K562PABPN1
    ZC3H3ENSG00000014164.6917.45250323.595801.503306.486204.77880K562PABPN1
    CAPN1ENSG00000014216.113414.273602122.316600.685803.484402.33670K562PABPN1
    MDH1ENSG00000014641.133350.194802272.024400.560202.339001.44380K562PABPN1
    YAF2ENSG00000015153.10481.85630293.499100.715102.555201.61400K562PABPN1
    RUFY3ENSG00000018189.8533.07940818.85480-0.619302.397801.49010K562PABPN1
    CD74ENSG00000019582.1019.895603.101202.681402.455701.53660K562PABPN1
    RTFDC1ENSG00000022277.82373.115601591.934200.575902.499801.57170K562PABPN1
    RNH1ENSG00000023191.122193.608501229.364100.835304.724103.33500K562PABPN1
    ERP44ENSG00000023318.73663.587602051.077800.836803.358002.23550K562PABPN1
    AKAP11ENSG00000023516.7948.689801843.42550-0.958405.867404.26640K562PABPN1
    GLRX2ENSG00000023572.4160.22820293.38540-0.872702.307201.42000K562PABPN1
    EHD2ENSG00000024422.7619.657301090.62560-0.815603.996102.75100K562PABPN1
    CCDC28AENSG00000024862.12743.46720378.644500.973304.952103.51940K562PABPN1
    TOMM34ENSG00000025772.72040.818601071.589900.929305.211003.73320K562PABPN1
    SH2D2AENSG00000027869.7362.33650618.36240-0.771103.203502.11780K562PABPN1
    RABEP1ENSG00000029725.12886.034901404.19420-0.664303.011201.96940K562PABPN1
    BAK1ENSG00000030110.8514.72390233.362501.141105.863904.26440K562PABPN1
    GRNENSG00000030582.122261.957501305.618800.792704.453603.11850K562PABPN1
    IFT88ENSG00000032742.13105.62050260.66830-1.303304.044702.79020K562PABPN1
    ABCF2ENSG00000033050.31504.482602527.46690-0.748403.839602.61940K562PABPN1
    SLC4A7ENSG00000033867.12263.12490471.56160-0.841703.501202.34990K562PABPN1
    UHRF1ENSG00000034063.9655.052601196.17920-0.868802.926501.90000K562PABPN1
    TMSB10ENSG00000034510.48876.866505315.501600.739704.208302.92200K562PABPN1
    PEX3ENSG00000034693.10199.35450330.43650-0.729002.540401.60240K562PABPN1
    FAM136AENSG00000035141.31151.729401745.00530-0.599402.634601.67330K562PABPN1
    NSUN2ENSG00000037474.101808.522203299.92320-0.867602.686601.71390K562PABPN1
    MFAP3ENSG00000037749.7370.49980590.67200-0.672902.642801.67920K562PABPN1
    METTL1ENSG00000037897.1277.34730190.16800-1.297903.783702.57510K562PABPN1
    BOD1L1ENSG00000038219.81433.746602163.68620-0.593702.634501.67330K562PABPN1
    ZFYVE16ENSG00000039319.12433.66540761.96820-0.813103.868302.64320K562PABPN1
    FAM65AENSG00000039523.131262.66140759.894100.732503.452702.31060K562PABPN1
    RTN4RENSG00000040608.975.5328018.465402.032205.101503.64250K562PABPN1
    LSG1ENSG00000041802.6425.37800702.46970-0.723702.931301.90290K562PABPN1
    THAP3ENSG00000041988.11571.90520325.276400.814003.698502.50630K562PABPN1
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    84 RBPs can affect the gene expression of PABPN1 :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    PABPN1ENSG00000100836.63789.531706481.53500-0.7743038.7712037.14160HepG2ACO1
    PABPN1ENSG00000100836.64958.650406283.78890-0.341702.408501.90870HepG2AKAP1
    PABPN1ENSG00000100836.64932.003406512.12460-0.401009.507508.18960HepG2AKAP8L
    PABPN1ENSG00000100836.65921.928508837.43600-0.5776019.7174018.19000HepG2AUH
    PABPN1ENSG00000100836.64627.698906087.73360-0.395604.633803.88300HepG2BOP1
    PABPN1ENSG00000100836.64557.635806559.87480-0.5254010.350909.00210HepG2CALR
    PABPN1ENSG00000100836.65305.092406480.29180-0.288707.193506.21350HepG2CKAP4
    PABPN1ENSG00000100836.63747.665704805.53050-0.358706.023404.51880HepG2YBX3
    PABPN1ENSG00000100836.67108.837708504.33870-0.258603.938803.19650HepG2CELF1
    PABPN1ENSG00000100836.64012.912004931.84880-0.297503.279602.28160HepG2DDX24
    PABPN1ENSG00000100836.64196.084906019.04820-0.520505.674504.80830HepG2DDX3X
    PABPN1ENSG00000100836.64172.995605299.05530-0.344702.477801.74100HepG2DDX55
    PABPN1ENSG00000100836.63563.417604718.64340-0.405107.609706.49020HepG2DNAJC21
    PABPN1ENSG00000100836.64142.866305186.27160-0.324102.783001.86070HepG2EEF2
    PABPN1ENSG00000100836.63305.136204640.82380-0.489703.867802.54640HepG2AGO1
    PABPN1ENSG00000100836.68779.9058010146.79780-0.208703.206602.56730HepG2ETF1
    PABPN1ENSG00000100836.65337.346006333.76460-0.246902.361801.59060HepG2EWSR1
    PABPN1ENSG00000100836.63162.380203762.89520-0.250802.596901.46750HepG2FAM120A
    PABPN1ENSG00000100836.65425.211307948.99170-0.551106.106505.00650HepG2FIP1L1
    PABPN1ENSG00000100836.65060.494303956.505600.355003.905302.98050HepG2FUBP3
    PABPN1ENSG00000100836.66590.774905141.295100.358202.791602.12370HepG2G3BP1
    PABPN1ENSG00000100836.67358.240605458.958000.430604.457303.31450HepG2G3BP2
    PABPN1ENSG00000100836.63054.719103748.42240-0.295202.307701.49670HepG2GEMIN5
    PABPN1ENSG00000100836.63874.529305294.65750-0.450504.587603.27080HepG2GNB2L1
    PABPN1ENSG00000100836.64315.635606334.90110-0.553706.109305.18380HepG2GPKOW
    PABPN1ENSG00000100836.65131.817806188.11080-0.270004.675403.43740HepG2HDGF
    PABPN1ENSG00000100836.65562.190404763.849700.223401.909101.36120HepG2HNRNPA1
    PABPN1ENSG00000100836.67291.234308403.60310-0.204802.825601.88350HepG2HNRNPA2B1
    PABPN1ENSG00000100836.67527.597605298.915400.506407.606806.50360HepG2HNRNPC
    PABPN1ENSG00000100836.68314.251005207.481800.6749011.4750010.14540HepG2HNRNPK
    PABPN1ENSG00000100836.64801.065206045.54610-0.332502.988602.33820HepG2HNRNPLL
    PABPN1ENSG00000100836.64062.019505669.95070-0.481103.162101.73860HepG2ILF3
    PABPN1ENSG00000100836.64559.171605706.93630-0.323902.407201.81380HepG2NCBP2
    PABPN1ENSG00000100836.67590.108809066.93490-0.256503.150902.33890HepG2NOL12
    PABPN1ENSG00000100836.66440.789705360.799700.264702.214801.54300HepG2NSUN2
    PABPN1ENSG00000100836.63627.922905315.49050-0.551103.121702.17560HepG2PABPC1
    PABPN1ENSG00000100836.64612.748105210.32450-0.175702.188901.42770HepG2PARN
    PABPN1ENSG00000100836.63065.453704087.70270-0.415203.811002.88200HepG2PRPF8
    PABPN1ENSG00000100836.65739.669508655.32640-0.5926010.727509.65670HepG2PUF60
    PABPN1ENSG00000100836.67752.127009188.17910-0.245206.005305.20000HepG2PUM1
    PABPN1ENSG00000100836.65828.324309181.36330-0.6556016.3990014.84750HepG2PUM2
    PABPN1ENSG00000100836.63694.574205453.38490-0.561703.194602.44050HepG2RAVER1
    PABPN1ENSG00000100836.65802.686108480.79550-0.5475015.2292014.21350HepG2RBM22
    PABPN1ENSG00000100836.66175.291705341.414700.209201.866501.30390HepG2RBM25
    PABPN1ENSG00000100836.64056.478906254.72370-0.624709.094507.28430HepG2RBM27
    PABPN1ENSG00000100836.67324.068606047.857100.276104.917104.23170HepG2NELFE
    PABPN1ENSG00000100836.66773.227705632.910300.265904.962304.16720HepG2RECQL
    PABPN1ENSG00000100836.63503.269104096.62620-0.225701.998101.46760HepG2RPS19
    PABPN1ENSG00000100836.64739.347405888.39720-0.313202.721001.65590HepG2RPS5
    PABPN1ENSG00000100836.65806.986707783.70820-0.422702.737402.06730HepG2SF3A3
    PABPN1ENSG00000100836.64878.649905657.70710-0.213703.081102.46140HepG2SF3B4
    PABPN1ENSG00000100836.67214.621308299.45360-0.202103.885603.07560HepG2SLBP
    PABPN1ENSG00000100836.64690.250405466.65010-0.221004.735103.93090HepG2SMN1
    PABPN1ENSG00000100836.67554.115509578.65850-0.3426010.112809.31770HepG2SRFBP1
    PABPN1ENSG00000100836.65796.440508546.07540-0.5601018.8906017.46000HepG2SRSF5
    PABPN1ENSG00000100836.64043.761904804.49950-0.248704.174203.52210HepG2SRSF9
    PABPN1ENSG00000100836.67518.818009719.06980-0.3703011.6958010.56680HepG2SUCLG1
    PABPN1ENSG00000100836.64569.021805366.65680-0.232102.385101.50720HepG2SUPT6H
    PABPN1ENSG00000100836.64332.289605275.10170-0.284101.872701.30170HepG2SUPV3L1
    PABPN1ENSG00000100836.66083.872105308.296600.196602.287801.76980HepG2TAF15
    PABPN1ENSG00000100836.66704.638408950.89430-0.416903.802002.81470HepG2UBE2L3
    PABPN1ENSG00000100836.64601.714203116.147000.562306.607405.42200HepG2UCHL5
    PABPN1ENSG00000100836.67485.282904830.308900.631805.446204.00910HepG2UPF2
    PABPN1ENSG00000100836.64322.937805997.54150-0.472403.148602.01390HepG2XRCC6
    PABPN1ENSG00000100836.67913.670505192.759900.607708.212306.97860HepG2XRN2
    PABPN1ENSG00000100836.65339.582607591.93870-0.5077023.1565021.95770HepG2ZNF622
    PABPN1ENSG00000100836.68099.086005815.184000.4778014.8443013.63890K562AGGF1
    PABPN1ENSG00000100836.67657.095706050.964800.339503.732702.97140K562AKAP8L
    PABPN1ENSG00000100836.65168.648806146.57100-0.250001.833401.33660K562AQR
    PABPN1ENSG00000100836.65375.068304637.617100.212802.738601.53350K562DDX21
    PABPN1ENSG00000100836.62755.664603330.38370-0.273302.109201.31140K562EFTUD2
    PABPN1ENSG00000100836.63192.083402708.610400.236802.378401.63820K562EIF3G
    PABPN1ENSG00000100836.62496.213203136.14630-0.329303.115902.24700K562EIF4A3
    PABPN1ENSG00000100836.61868.596802854.41450-0.611205.246904.20200K562G3BP2
    PABPN1ENSG00000100836.62055.472903338.94710-0.699909.352806.74530K562GEMIN5
    PABPN1ENSG00000100836.62654.323103226.55150-0.281602.689002.09910K562HNRNPC
    PABPN1ENSG00000100836.65594.336004869.614600.200102.113001.33440K562HNRNPU
    PABPN1ENSG00000100836.68712.004406421.578000.440006.475405.08970K562KIF1C
    PABPN1ENSG00000100836.64170.094603272.614100.349503.157701.57410K562LIN28B
    PABPN1ENSG00000100836.66880.214405042.326900.448303.427902.42430K562NAA15
    PABPN1ENSG00000100836.65610.527905137.607300.126902.095501.43610K562NSUN2
    PABPN1ENSG00000100836.64178.520703176.961500.395203.958202.11630K562NUSAP1
    PABPN1ENSG00000100836.64232.329703150.172600.425905.007103.01530K562PHF6
    PABPN1ENSG00000100836.63594.955402892.961900.313303.216602.22900K562PSIP1
    PABPN1ENSG00000100836.66294.647507807.84130-0.310802.837002.01030K562PUF60
    PABPN1ENSG00000100836.611415.403906000.881000.9276021.0812019.61220K562PUS1
    PABPN1ENSG00000100836.68172.893605846.967600.4831010.688709.54780K562RBM15
    PABPN1ENSG00000100836.62584.094503301.06840-0.353302.615001.82380K562RPS19
    PABPN1ENSG00000100836.62303.316003137.66050-0.446003.890602.67060K562SUPV3L1
    PABPN1ENSG00000100836.63411.901402782.533500.294102.110101.30460K562TIAL1
    PABPN1ENSG00000100836.63568.562202956.192000.271502.271701.42740K562TRIM56
    PABPN1ENSG00000100836.62594.811003320.91890-0.356003.048401.97390K562UCHL5
    PABPN1ENSG00000100836.65750.003904847.126100.246302.583301.76310K562WDR43
    PABPN1ENSG00000100836.62506.419703381.76830-0.432104.227502.61880K562XRN2
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".






    The Knockdown/knockout RNA-Seq assay for PABPN1 is not available on ENCORE database.





    3 RBPs can affect the splicing of PABPN1 :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    RIPABPN1ENSG00000100836.6chr14+2379318723793426237931872379326123793346237934260.060000.000000.00000includedHepG2SF3A3
    RIPABPN1ENSG00000100836.6chr14+2379318723793426237931872379326123793346237934260.065000.000000.00000includedK562UTP18
    RIPABPN1ENSG00000100836.6chr14+2379322923793426237932292379326123793346237934260.088000.000000.00000includedK562AQR

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    The Knockdown/knockout RNA-Seq assay for PABPN1 is not avaliable on ENCORE database.