PEX3

General Information

Gene Name       : PEX3
Gene ID             : ENSG00000034693.14
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: PEX3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PEX3ENSG00000034693.1422.2119.5520.88ENCSR000AEF
HepG2PEX3ENSG00000034693.1416.2325.0720.65ENCSR985KAT
K562PEX3ENSG00000034693.1415.0017.8516.43ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PEX3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PEX3 RNA is bound by 3 proteins.  







eCLIP assay for PEX3 is not avaliable on ENCORE database.





3 proteins are bound to PEX3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr6143799840143799897+intron-Distal3.863553.16986HepG2QKI
chr6143807926143808053+intron-Distal3.114453.51804HepG2HNRNPL
chr6143798831143798885+intron-Distal4.778594.85866HepG2QKI
chr6143784608143784683+intron-Distal5.9653216.13880HepG2QKI
chr6143791074143791137+intron-Distal4.273354.28663HepG2SUGP2
chr6143784563143784608+intron-Distal4.774486.23638HepG2QKI
chr6143796140143796265+intron-Distal3.716574.23286HepG2QKI
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PEX3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PEX3 is not available on ENCORE database.

  • 89 RBPs can affect the levels of PEX3.  








The Knockdown/knockout RNA-Seq assay for PEX3 is not available on ENCORE database.





89 RBPs can affect the gene expression of PEX3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PEX3ENSG00000034693.10311.37810476.43380-0.613604.316703.10040HepG2ADAR
PEX3ENSG00000034693.10315.33600504.23810-0.677204.730403.71590HepG2ASCC1
PEX3ENSG00000034693.10282.22880544.04160-0.946907.382005.81050HepG2BCCIP
PEX3ENSG00000034693.10299.83200472.73800-0.656903.982402.92200HepG2BCLAF1
PEX3ENSG00000034693.10632.50010483.448400.387602.436601.87110HepG2BOP1
PEX3ENSG00000034693.10263.50530427.77920-0.699007.248606.26660HepG2CKAP4
PEX3ENSG00000034693.10204.58480443.84000-1.1173010.489309.23590HepG2CPSF6
PEX3ENSG00000034693.10288.19960431.42060-0.582004.034202.70820HepG2CPSF7
PEX3ENSG00000034693.10239.12740336.06270-0.491002.440101.42770HepG2CSTF2
PEX3ENSG00000034693.10572.64810709.58480-0.309302.531101.81690HepG2DAZAP1
PEX3ENSG00000034693.10989.89370583.782100.761707.587406.59840HepG2DDX3X
PEX3ENSG00000034693.10344.31330501.42720-0.542302.921802.28890HepG2DDX6
PEX3ENSG00000034693.10347.24010479.77900-0.466403.565702.77370HepG2DNAJC21
PEX3ENSG00000034693.10259.50240475.46630-0.8736010.024808.87630HepG2DNAJC2
PEX3ENSG00000034693.10314.79370482.08740-0.614903.813203.12440HepG2EIF2S1
PEX3ENSG00000034693.10299.08750397.42190-0.410102.423901.33290HepG2EIF2S2
PEX3ENSG00000034693.10285.37230518.69570-0.862005.498004.55070HepG2EIF4B
PEX3ENSG00000034693.10535.82950747.51250-0.480304.871604.11410HepG2ETF1
PEX3ENSG00000034693.10261.11780498.63610-0.933307.860106.76820HepG2G3BP1
PEX3ENSG00000034693.10276.36500484.37460-0.809506.933905.97970HepG2HNRNPA1
PEX3ENSG00000034693.10345.04500538.75190-0.642804.885003.98310HepG2HNRNPC
PEX3ENSG00000034693.10302.80780504.81850-0.737405.633204.66480HepG2HNRNPK
PEX3ENSG00000034693.10465.50610646.36070-0.473504.927504.04780HepG2HNRNPL
PEX3ENSG00000034693.10404.74300535.19190-0.403103.325102.66570HepG2HNRNPU
PEX3ENSG00000034693.10379.25160546.68510-0.527605.179904.20390HepG2ILF2
PEX3ENSG00000034693.10329.52590509.79460-0.629503.479702.33880HepG2KHSRP
PEX3ENSG00000034693.10484.22280758.97110-0.648404.440103.37990HepG2LARP4
PEX3ENSG00000034693.10288.79750426.03010-0.560903.092201.81060HepG2LIN28B
PEX3ENSG00000034693.10409.00100537.67110-0.394601.986001.42600HepG2MAGOH
PEX3ENSG00000034693.10461.09840703.62580-0.609706.470605.30830HepG2NOL12
PEX3ENSG00000034693.10305.93180492.92150-0.688104.868103.92120HepG2PABPC4
PEX3ENSG00000034693.10297.31880529.77990-0.833407.627806.33310HepG2PARN
PEX3ENSG00000034693.10288.42820477.35280-0.726806.121505.05710HepG2PPIL4
PEX3ENSG00000034693.10241.10040412.65780-0.775305.029603.97380HepG2PRPF8
PEX3ENSG00000034693.10441.54950713.04400-0.6914010.519509.52060HepG2PUM1
PEX3ENSG00000034693.10550.26380712.51200-0.372802.653701.99680HepG2PUM2
PEX3ENSG00000034693.10339.29040497.38460-0.551804.368503.60950HepG2QKI
PEX3ENSG00000034693.10685.60160544.603800.332102.211201.43460HepG2RBM15
PEX3ENSG00000034693.10334.93720489.07020-0.546202.887601.87340HepG2RBM27
PEX3ENSG00000034693.10360.90230475.99110-0.399302.767602.15100HepG2RECQL
PEX3ENSG00000034693.10323.01960459.93910-0.509802.223601.37560HepG2RPS10
PEX3ENSG00000034693.10220.71900316.04360-0.517902.767102.15210HepG2RPS19
PEX3ENSG00000034693.10215.92470408.20640-0.918806.212105.08330HepG2RRP9
PEX3ENSG00000034693.10346.61660476.62690-0.459503.524702.81360HepG2SAFB2
PEX3ENSG00000034693.10335.01710538.44690-0.684604.183003.34430HepG2SF3A3
PEX3ENSG00000034693.10358.17010475.27900-0.408102.150401.52310HepG2SF3B1
PEX3ENSG00000034693.10316.93960478.14050-0.593205.167404.40150HepG2SF3B4
PEX3ENSG00000034693.10432.27250644.08040-0.575304.900404.00780HepG2SLBP
PEX3ENSG00000034693.10238.20430456.83500-0.939503.893102.00960HepG2SLTM
PEX3ENSG00000034693.10389.36430555.85260-0.513604.061703.30720HepG2SMN1
PEX3ENSG00000034693.10295.73500455.72490-0.623903.494101.68130HepG2SND1
PEX3ENSG00000034693.10657.16580499.065900.396903.212002.71230HepG2SRSF1
PEX3ENSG00000034693.10422.06760663.21510-0.652007.825106.84300HepG2SRSF5
PEX3ENSG00000034693.10319.42180459.50390-0.524604.639403.77300HepG2SRSF7
PEX3ENSG00000034693.10283.45580406.00860-0.518404.112203.46420HepG2SRSF9
PEX3ENSG00000034693.10554.32190754.24000-0.444304.663103.89310HepG2SUCLG1
PEX3ENSG00000034693.10295.29520532.49330-0.850605.996705.05820HepG2SUPV3L1
PEX3ENSG00000034693.10287.11060520.13370-0.857308.991308.18150HepG2TIAL1
PEX3ENSG00000034693.10287.17130524.68150-0.8695010.704009.70350HepG2TRIM56
PEX3ENSG00000034693.10441.35490656.23960-0.572304.847203.65790HepG2TUFM
PEX3ENSG00000034693.10276.76450452.55280-0.709405.090804.25310HepG2U2AF1
PEX3ENSG00000034693.10150.59350314.56510-1.062708.067106.77330HepG2UCHL5
PEX3ENSG00000034693.10362.15640477.51760-0.398903.060602.33420HepG2UPF1
PEX3ENSG00000034693.10358.75190461.02830-0.361902.427601.85880HepG2UTP3
PEX3ENSG00000034693.10340.32980524.18110-0.623103.930503.07450HepG2XRN2
PEX3ENSG00000034693.10294.59020467.79450-0.667203.925102.35410HepG2ZRANB2
PEX3ENSG00000034693.10277.01580389.18490-0.490503.402202.78550K562AGGF1
PEX3ENSG00000034693.10366.18660684.93570-0.903408.988408.02870K562AQR
PEX3ENSG00000034693.10264.37470464.03260-0.811608.783907.04100K562BCLAF1
PEX3ENSG00000034693.10801.13600612.247900.387803.703202.96410K562DDX47
PEX3ENSG00000034693.10401.89590561.36230-0.482104.168503.31270K562EIF2S2
PEX3ENSG00000034693.10250.47350386.42330-0.625503.265502.13520K562EIF3D
PEX3ENSG00000034693.10450.68170338.132300.414402.871802.06220K562EIF3G
PEX3ENSG00000034693.10433.98090281.731300.623205.123704.33550K562FXR1
PEX3ENSG00000034693.10439.30580309.404400.505602.442701.78480K562G3BP2
PEX3ENSG00000034693.10271.13280397.56270-0.552203.327502.68070K562HNRNPC
PEX3ENSG00000034693.10230.53750355.00580-0.622803.742102.39640K562HNRNPF
PEX3ENSG00000034693.10400.91930553.28510-0.464703.325002.15370K562HNRNPL
PEX3ENSG00000034693.10561.26730444.806700.335402.252801.44660K562HNRNPU
PEX3ENSG00000034693.10299.89470421.81440-0.492203.179502.27550K562MAGOH
PEX3ENSG00000034693.10333.72950448.70770-0.427103.197702.32850K562MTPAP
PEX3ENSG00000034693.10386.86830498.59130-0.366002.854802.09770K562NSUN2
PEX3ENSG00000034693.10277.15140391.41060-0.498002.700201.30620K562NUSAP1
PEX3ENSG00000034693.10199.35450330.43650-0.729002.540401.60240K562PABPN1
PEX3ENSG00000034693.10253.23890375.30260-0.567603.422302.33560K562PCBP2
PEX3ENSG00000034693.10167.42990356.45160-1.090109.090807.25400K562PSIP1
PEX3ENSG00000034693.10515.30160409.822300.330301.998601.41760K562PTBP1
PEX3ENSG00000034693.10223.75950406.52620-0.861403.308101.59410K562RBM39
PEX3ENSG00000034693.10227.70880321.71580-0.498602.938202.05560K562SF3B4
PEX3ENSG00000034693.10401.75340503.98560-0.327102.284701.42520K562SRPK2
PEX3ENSG00000034693.10265.16570379.45070-0.517003.036201.92570K562SRSF5
PEX3ENSG00000034693.10199.97980340.05800-0.765904.442003.12880K562SUPV3L1
PEX3ENSG00000034693.10421.35660320.857900.393002.270301.52540K562SYNCRIP
PEX3ENSG00000034693.10266.11840406.60440-0.611604.070303.20580K562TARDBP
PEX3ENSG00000034693.10293.81640392.21860-0.416702.273601.53810K562TIA1
PEX3ENSG00000034693.10233.32880342.84980-0.555202.802201.85910K562TIAL1
PEX3ENSG00000034693.10250.19920364.20630-0.541702.939701.95900K562TRIM56
PEX3ENSG00000034693.10194.81520299.90170-0.622403.118801.94700K562U2AF1
PEX3ENSG00000034693.10166.01980309.73700-0.899707.244805.95070K562U2AF2
PEX3ENSG00000034693.10244.25660528.66410-1.1140017.2318015.60660K562UPF1
PEX3ENSG00000034693.10338.45690452.36590-0.418502.608601.75640K562WDR3
PEX3ENSG00000034693.10619.96700771.69800-0.315802.092401.35250K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PEX3 is not available on ENCORE database.





13 RBPs can affect the splicing of PEX3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPEX3ENSG00000034693.10chr6+143806288143806385143800212143800335143810279143811147-0.236000.004050.06302excludedK562SF3B4
SEPEX3ENSG00000034693.10chr6+143793296143793465143792693143792748143795922143795993-0.151000.004750.07294excludedHepG2U2AF1
SEPEX3ENSG00000034693.10chr6+143806288143806385143800212143800335143810279143811147-0.218000.000010.00097excludedK562AKAP8L
SEPEX3ENSG00000034693.10chr6+143793296143793465143792693143792748143795922143795993-0.169000.000520.01887excludedK562AKAP8L
SEPEX3ENSG00000034693.10chr6+143806288143806385143800212143800335143810279143811147-0.141000.002440.05497excludedHepG2HNRNPK
SEPEX3ENSG00000034693.10chr6+143806288143806385143800212143800335143810279143811147-0.304000.000000.00009excludedHepG2U2AF2
SEPEX3ENSG00000034693.10chr6+143793296143793465143792673143792748143795922143795993-0.086000.004790.04486excludedK562AQR
SEPEX3ENSG00000034693.10chr6+143806288143806385143800212143800335143810279143811147-0.176000.000620.01144excludedK562PUS1
SEPEX3ENSG00000034693.10chr6+143793296143793465143792693143792748143795922143795993-0.286000.000000.00002excludedK562PUS1
SEPEX3ENSG00000034693.10chr6+143793296143793465143792693143792748143795922143795993-0.473000.000000.00000excludedK562U2AF1
SEPEX3ENSG00000034693.10chr6+143806288143806385143800212143800335143810279143811147-0.127000.000000.00012excludedHepG2HNRNPL
SEPEX3ENSG00000034693.10chr6+143806288143806385143800212143800335143810279143811147-0.127000.000400.03232excludedK562HNRNPL
SEPEX3ENSG00000034693.10chr6+143806288143806385143800212143800335143810279143811147-0.240000.001350.02569excludedK562U2AF2
SEPEX3ENSG00000034693.10chr6+143793296143793465143792673143792748143795922143795993-0.256000.001380.02618excludedK562U2AF2
SEPEX3ENSG00000034693.10chr6+143806288143806385143800212143800335143810279143811147-0.178000.000410.01878excludedK562TARDBP
SEPEX3ENSG00000034693.10chr6+143806288143806385143800212143800335143810279143811147-0.241000.000000.00002excludedK562HNRNPU
SEPEX3ENSG00000034693.10chr6+143806288143806385143800212143800335143810279143811147-0.289000.000000.00005excludedK562RBM15
SEPEX3ENSG00000034693.10chr6+143793296143793465143792693143792748143795922143795993-0.317000.000000.00001excludedK562RBM15
SEPEX3ENSG00000034693.10chr6+143806288143806385143800212143800335143810279143811147-0.128000.004180.08111excludedK562AGGF1
SEPEX3ENSG00000034693.10chr6+143806288143806385143800212143800335143810279143811147-0.091000.000250.04249excludedK562ZC3H8
SEPEX3ENSG00000034693.10chr6+143806288143806385143800212143800335143810279143811147-0.135000.000250.01451excludedHepG2HNRNPU
A3SSPEX3ENSG00000034693.10chr6+1437802011437803531437802211437803531437721161437722520.079000.000130.00111longerK562AQR
MXEPEX3ENSG00000034693.10chr6+1438002121438003351438062881438063851437959221437959931438102791438111470.245000.003950.055091includedK562U2AF1
MXEPEX3ENSG00000034693.10chr6+1438002121438003351438062881438063851437959221437959931438102791438111470.233000.009310.088481includedK562U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PEX3 is not avaliable on ENCORE database.