F7

General Information

Gene Name : F7
Gene ID : ENSG00000057593.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: F7)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	F7	ENSG00000057593.13	0.00	0.00	0.00	ENCSR000AEF
HepG2	F7	ENSG00000057593.13	16.95	5.58	11.27	ENCSR985KAT
K562	F7	ENSG00000057593.13	0.00	0.00	0.00	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for F7 is not avaliable on ENCORE database.

Proteins bound to RNA

F7 RNA is bound by 37 proteins.

CanvasJS.com

eCLIP assay for F7 is not avaliable on ENCORE database.

37 proteins are bound to F7 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr13	113761001	113761124	+	intron-Distal,intron-Proximal	7.89286	187.35370	HepG2	RBFOX2
chr13	113760946	113761001	+	intron-Distal	8.35092	91.51299	HepG2	RBFOX2
chr13	113764370	113764475	+	intron-Distal	6.59308	86.69771	HepG2	CSTF2T
chr13	113761044	113761099	+	intron-Distal,intron-Proximal	7.55811	86.37738	HepG2	CSTF2T
chr13	113767417	113767473	+	intron-Distal	5.85740	85.75848	HepG2	XPO5
chr13	113767328	113767417	+	intron-Distal	6.06787	79.09712	HepG2	XPO5
chr13	113764475	113764618	+	intron-Distal	6.37416	76.21685	HepG2	CSTF2T
chr13	113760709	113760793	+	intron-Distal	8.01331	75.51336	HepG2	RBFOX2
chr13	113763942	113764055	+	intron-Distal	6.02639	74.24150	HepG2	CSTF2T
chr13	113766983	113767069	+	intron-Distal	6.36208	73.70643	HepG2	AGGF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 317 entries

eCLIP assay for F7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for F7 is not available on ENCORE database.
118 RBPs can affect the levels of F7.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for F7 is not available on ENCORE database.

118 RBPs can affect the gene expression of F7 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
F7	ENSG00000057593.9	285.11720	1581.13060	-2.47130	127.24850	125.25280	HepG2	SRSF1
F7	ENSG00000057593.9	149.91300	1625.08940	-3.43830	99.84500	97.46030	HepG2	AKAP1
F7	ENSG00000057593.9	379.89920	1429.89030	-1.91220	82.45560	79.99490	HepG2	PCBP1
F7	ENSG00000057593.9	2325.84070	468.36520	2.31190	63.40240	61.04360	HepG2	HNRNPLL
F7	ENSG00000057593.9	927.33110	250.16340	1.89010	61.39480	58.95380	HepG2	HNRNPF
F7	ENSG00000057593.9	174.96580	754.58570	-2.10860	59.21580	57.31500	HepG2	ACO1
F7	ENSG00000057593.9	440.37320	1320.49250	-1.58430	56.59850	54.43270	HepG2	UTP3
F7	ENSG00000057593.9	2942.21910	1167.57420	1.33330	52.51850	50.52750	HepG2	ETF1
F7	ENSG00000057593.9	825.63770	245.77160	1.74810	50.70540	48.53750	HepG2	SRSF7
F7	ENSG00000057593.9	1371.13200	558.82840	1.29480	49.50010	47.31960	HepG2	SLBP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 118 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for F7 is not available on ENCORE database.

6 RBPs can affect the splicing of F7 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	F7	ENSG00000057593.9	chr13	+	113769973	113770114	113768160	113768274	113771079	113771189	-0.45800	0.00000	0.00000	excluded	HepG2	HNRNPK
SE	F7	ENSG00000057593.9	chr13	+	113765003	113765164	113760104	113760219	113768160	113768274	0.52200	0.00000	0.00040	included	HepG2	DDX6
SE	F7	ENSG00000057593.9	chr13	+	113765003	113765164	113760104	113760219	113768065	113768090	-0.75600	0.00000	0.00000	excluded	HepG2	SRSF1
RI	F7	ENSG00000057593.9	chr13	+	113768065	113768265	113768065	113768090	113768160	113768265	0.66200	0.00004	0.00179	included	HepG2	SRSF1
SE	F7	ENSG00000057593.9	chr13	+	113765003	113765164	113760104	113760219	113768160	113768274	-0.43000	0.00022	0.01886	excluded	HepG2	RBM22
SE	F7	ENSG00000057593.9	chr13	+	113769273	113769381	113768088	113768274	113769973	113770114	0.09700	0.00022	0.05465	included	HepG2	ILF3
SE	F7	ENSG00000057593.9	chr13	+	113769973	113770114	113768160	113768274	113771079	113771189	-0.10600	0.00246	0.08222	excluded	HepG2	MATR3

Showing 1 to 7 of 7 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

F7

General Information

Functions

Localization

Domains (AlphaFold: F7)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for F7 is not avaliable on ENCORE database.

37 proteins are bound to F7 RNA:

eCLIP assay for F7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for F7 is not available on ENCORE database.

118 RBPs can affect the gene expression of F7 :

The Knockdown/knockout RNA-Seq assay for F7 is not available on ENCORE database.

6 RBPs can affect the splicing of F7 :

The Knockdown/knockout RNA-Seq assay for F7 is not avaliable on ENCORE database.