SUN1

General Information

Gene Name : SUN1
Gene ID : ENSG00000164828.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SUN1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SUN1	ENSG00000164828.17	22.23	29.54	25.88	ENCSR000AEF
HepG2	SUN1	ENSG00000164828.17	67.63	37.68	52.66	ENCSR985KAT
K562	SUN1	ENSG00000164828.17	63.73	41.87	52.80	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SUN1 is not avaliable on ENCORE database.

Proteins bound to RNA

SUN1 RNA is bound by 80 proteins.

CanvasJS.com

eCLIP assay for SUN1 is not avaliable on ENCORE database.

80 proteins are bound to SUN1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	912978	913068	+	3'-UTR,intron-Distal	6.48203	400.00000	K562	PUM2
chr7	916950	917099	+	intron-Distal	6.60918	400.00000	HepG2	PCBP2
chr7	933102	933187	+	intron-Distal	9.38943	176.75149	K562	AATF
chr7	917203	917304	+	intron-Distal	7.47847	136.15734	HepG2	PCBP2
chr7	933256	933363	+	intron-Distal,intron-Proximal	8.86598	121.77306	K562	AATF
chr7	917483	917583	+	5'-UTR,intron-Distal	8.94574	116.95971	HepG2	PCBP2
chr7	917397	917478	+	intron-Distal	7.61404	99.40227	HepG2	PCBP2
chr7	917304	917387	+	intron-Distal	7.65569	95.69238	HepG2	PCBP2
chr7	916683	916779	+	intron-Distal	6.83795	94.41087	HepG2	PCBP2
chr7	932728	932818	+	intron-Distal	9.23594	69.25778	K562	AATF
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 651 entries

eCLIP assay for SUN1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SUN1 is not available on ENCORE database.
68 RBPs can affect the levels of SUN1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SUN1 is not available on ENCORE database.

68 RBPs can affect the gene expression of SUN1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SUN1	ENSG00000164828.13	5321.54000	3097.06120	0.78080	36.39600	35.11970	HepG2	SRFBP1
SUN1	ENSG00000164828.13	1776.17730	2729.62420	-0.61990	14.53260	13.25860	K562	FXR1
SUN1	ENSG00000164828.13	1539.54420	2251.13850	-0.54820	13.75450	12.56090	HepG2	PUS1
SUN1	ENSG00000164828.13	2662.67470	1922.33510	0.46990	10.92670	9.95770	HepG2	SRSF9
SUN1	ENSG00000164828.13	1539.39950	2190.26720	-0.50870	10.89750	9.83580	HepG2	UTP3
SUN1	ENSG00000164828.13	3054.80810	2123.87880	0.52430	10.62300	9.63770	HepG2	TAF15
SUN1	ENSG00000164828.13	3880.86400	2229.98430	0.79920	10.03050	8.93470	HepG2	DDX6
SUN1	ENSG00000164828.13	1211.13010	1931.02390	-0.67300	8.20220	7.12160	HepG2	U2AF1
SUN1	ENSG00000164828.13	2023.10700	2742.07400	-0.43870	7.81840	7.05010	HepG2	RBM22
SUN1	ENSG00000164828.13	1530.67750	2020.30890	-0.40040	8.28220	6.59290	HepG2	KIF1C
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 73 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SUN1 is not available on ENCORE database.

47 RBPs can affect the splicing of SUN1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	SUN1	ENSG00000164828.13	chr7	+	889156	889240			888244	888252	889559	889670	-0.30900	0.00042	excluded	K562	AKAP8L
SE	SUN1	ENSG00000164828.13	chr7	+	889156	889240			888054	888252	889559	889670	0.25700	0.00011	included	K562	FXR1
SE	SUN1	ENSG00000164828.13	chr7	+	889156	889240			888054	888252	889559	889670	-0.20700	0.00152	excluded	K562	LARP4
SE	SUN1	ENSG00000164828.13	chr7	+	872141	872238			856251	856310	878434	878623	-0.23100	0.00031	excluded	HepG2	SF3A3
SE	SUN1	ENSG00000164828.13	chr7	+	889156	889240			888244	888252	889559	889670	-0.24600	0.00008	excluded	K562	HNRNPUL1
A3SS	SUN1	ENSG00000164828.13	chr7	+	895973	896038			895994	896038	894479	894643	0.14000	0.00000	longer	K562	AQR
RI	SUN1	ENSG00000164828.13	chr7	+	892245	892589			892245	892304	892446	892589	-0.35600	0.00028	excluded	HepG2	DDX59
MXE	SUN1	ENSG00000164828.13	chr7	+	889156	889240	891020	891119	888244	888252	891586	891680	-0.26000	0.00010	2included	K562	PUS1
MXE	SUN1	ENSG00000164828.13	chr7	+	889156	889240	889559	889670	888244	888252	891020	891119	-0.31900	0.00000	2included	K562	AGGF1
MXE	SUN1	ENSG00000164828.13	chr7	+	889156	889240	891020	891119	888244	888252	891586	891680	-0.30100	0.00000	2included	K562	AGGF1

Showing 1 to 10 of 126 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SUN1

General Information

Functions

Localization

Domains (AlphaFold: SUN1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SUN1 is not avaliable on ENCORE database.

80 proteins are bound to SUN1 RNA:

eCLIP assay for SUN1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SUN1 is not available on ENCORE database.

68 RBPs can affect the gene expression of SUN1 :

The Knockdown/knockout RNA-Seq assay for SUN1 is not available on ENCORE database.

47 RBPs can affect the splicing of SUN1 :

The Knockdown/knockout RNA-Seq assay for SUN1 is not avaliable on ENCORE database.