FAM65A

General Information

Gene Name : FAM65A
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: FAM65A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for FAM65A is not avaliable on ENCORE database.

Proteins bound to RNA

FAM65A RNA is bound by 16 proteins.

CanvasJS.com

eCLIP assay for FAM65A is not avaliable on ENCORE database.

16 proteins are bound to FAM65A RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	67576840	67576996	+	CDS	5.34151	24.02757	HepG2	DDX59
chr16	67576782	67576870	+	CDS	5.13786	19.12126	HepG2	PCBP2
chr16	67576719	67576840	+	CDS	4.58092	17.75657	HepG2	DDX59
chr16	67576700	67576774	+	CDS	6.08441	15.19890	HepG2	PCBP2
chr16	67576465	67576582	+	CDS	4.33875	14.02459	HepG2	HNRNPK
chr16	67576618	67576646	+	CDS	5.57106	13.52561	HepG2	HNRNPK
chr16	67576533	67576642	+	CDS	5.03688	13.27672	HepG2	PCBP2
chr16	67576827	67576886	+	CDS	3.77688	12.51977	HepG2	HNRNPK
chr16	67576543	67576656	+	CDS	4.53570	12.48637	HepG2	DDX59
chr16	67571300	67571399	+	5'-UTR,intron-Distal	5.51370	12.12716	HepG2	CSTF2T
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 52 entries

eCLIP assay for FAM65A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for FAM65A is not available on ENCORE database.
107 RBPs can affect the levels of FAM65A.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for FAM65A is not available on ENCORE database.

107 RBPs can affect the gene expression of FAM65A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
FAM65A	ENSG00000039523.13	1073.60730	504.00170	1.09090	29.88250	28.44170	HepG2	SRSF9
FAM65A	ENSG00000039523.13	1837.32460	795.22200	1.20810	28.30630	26.31960	HepG2	PUM2
FAM65A	ENSG00000039523.13	602.89030	1133.12640	-0.91030	23.16360	21.55960	HepG2	ZC3H8
FAM65A	ENSG00000039523.13	1323.33480	740.21540	0.83810	19.41900	17.96730	HepG2	SRSF5
FAM65A	ENSG00000039523.13	935.19890	524.40780	0.83450	17.19400	15.78520	HepG2	SAFB2
FAM65A	ENSG00000039523.13	4740.64160	826.71750	2.51950	16.34590	13.81230	HepG2	U2AF2
FAM65A	ENSG00000039523.13	1438.33300	909.08610	0.66180	14.96920	13.79270	HepG2	ACO1
FAM65A	ENSG00000039523.13	685.88390	1128.36210	-0.71820	13.98520	13.01060	HepG2	SSB
FAM65A	ENSG00000039523.13	1102.29620	511.41360	1.10780	14.13440	12.67500	HepG2	HNRNPK
FAM65A	ENSG00000039523.13	308.61740	605.65470	-0.97270	13.70040	12.45780	K562	FXR1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 127 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for FAM65A is not available on ENCORE database.

6 RBPs can affect the splicing of FAM65A :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
RI	FAM65A	ENSG00000039523.13	chr16	+	67579851	67580134	67579851	67579935	67580043	67580134	0.13600	0.00000	0.00004	included	HepG2	RBM22
RI	FAM65A	ENSG00000039523.13	chr16	+	67575419	67575661	67575419	67575481	67575555	67575661	0.15000	0.00000	0.00001	included	K562	AQR
RI	FAM65A	ENSG00000039523.13	chr16	+	67574360	67574607	67574360	67574404	67574481	67574607	0.07400	0.00002	0.00023	included	K562	PUS1
A3SS	FAM65A	ENSG00000039523.13	chr16	+	67578514	67578733	67578597	67578733	67578201	67578334	0.71500	0.00005	0.00234	longer	HepG2	U2AF2
RI	FAM65A	ENSG00000039523.13	chr16	+	67574360	67574607	67574360	67574404	67574481	67574607	0.08500	0.00009	0.00140	included	HepG2	U2AF1
RI	FAM65A	ENSG00000039523.13	chr16	+	67574360	67574607	67574360	67574404	67574481	67574607	0.09700	0.00021	0.00345	included	HepG2	RBM22
RI	FAM65A	ENSG00000039523.13	chr16	+	67574360	67574607	67574360	67574404	67574481	67574607	0.10900	0.00090	0.07823	included	K562	HNRNPK
RI	FAM65A	ENSG00000039523.13	chr16	+	67574360	67574607	67574360	67574404	67574481	67574607	0.08000	0.00842	0.04623	included	K562	AQR

Showing 1 to 8 of 8 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

FAM65A

General Information

Functions

Localization

Domains (AlphaFold: FAM65A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for FAM65A is not avaliable on ENCORE database.

16 proteins are bound to FAM65A RNA:

eCLIP assay for FAM65A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for FAM65A is not available on ENCORE database.

107 RBPs can affect the gene expression of FAM65A :

The Knockdown/knockout RNA-Seq assay for FAM65A is not available on ENCORE database.

6 RBPs can affect the splicing of FAM65A :

The Knockdown/knockout RNA-Seq assay for FAM65A is not avaliable on ENCORE database.