GET4

General Information

Gene Name : GET4
Gene ID : ENSG00000239857.6
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: GET4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	GET4	ENSG00000239857.6	2.78	9.55	6.17	ENCSR000AEF
HepG2	GET4	ENSG00000239857.6	42.49	17.11	29.80	ENCSR985KAT
K562	GET4	ENSG00000239857.6	34.99	22.33	28.66	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for GET4 is not avaliable on ENCORE database.

Proteins bound to RNA

GET4 RNA is bound by 58 proteins.

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eCLIP assay for GET4 is not avaliable on ENCORE database.

58 proteins are bound to GET4 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	916950	917099	+	intron-Distal	6.60918	400.00000	HepG2	PCBP2
chr7	933102	933187	+	intron-Distal	9.38943	176.75149	K562	AATF
chr7	917203	917304	+	intron-Distal	7.47847	136.15734	HepG2	PCBP2
chr7	933256	933363	+	intron-Distal,intron-Proximal	8.86598	121.77306	K562	AATF
chr7	917483	917583	+	5'-UTR,intron-Distal	8.94574	116.95971	HepG2	PCBP2
chr7	917397	917478	+	intron-Distal	7.61404	99.40227	HepG2	PCBP2
chr7	917304	917387	+	intron-Distal	7.65569	95.69238	HepG2	PCBP2
chr7	916683	916779	+	intron-Distal	6.83795	94.41087	HepG2	PCBP2
chr7	932728	932818	+	intron-Distal	9.23594	69.25778	K562	AATF
chr7	933187	933229	+	intron-Distal	7.71014	67.48455	K562	AATF
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 407 entries

eCLIP assay for GET4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for GET4 is not available on ENCORE database.
105 RBPs can affect the levels of GET4.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for GET4 is not available on ENCORE database.

105 RBPs can affect the gene expression of GET4 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
GET4	ENSG00000239857.2	1141.90600	441.34890	1.37140	33.64280	32.25180	HepG2	TIAL1
GET4	ENSG00000239857.2	909.27500	445.35650	1.02970	23.11330	21.68230	HepG2	TRIM56
GET4	ENSG00000239857.2	798.43780	404.53720	0.98080	20.04400	18.53280	HepG2	SAFB2
GET4	ENSG00000239857.2	747.57120	403.65370	0.88900	17.68020	16.16780	HepG2	DNAJC2
GET4	ENSG00000239857.2	781.64370	405.16870	0.94790	16.17070	14.47760	HepG2	PPIL4
GET4	ENSG00000239857.2	1631.91610	892.42060	0.87070	15.58320	14.32240	HepG2	PUF60
GET4	ENSG00000239857.2	1474.18840	757.56120	0.96040	15.17680	13.26220	K562	TARDBP
GET4	ENSG00000239857.2	2445.10490	1659.66050	0.55890	13.81390	12.92200	HepG2	SRFBP1
GET4	ENSG00000239857.2	738.38480	407.20280	0.85850	13.15150	11.71050	HepG2	DNAJC21
GET4	ENSG00000239857.2	1256.92220	730.77060	0.78230	12.37250	10.52650	K562	TIA1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 117 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for GET4 is not available on ENCORE database.

9 RBPs can affect the splicing of GET4 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	GET4	ENSG00000239857.2	chr7	+	926988	927156	927006	927156	926043	926287	0.08200	0.00000	0.00000	longer	K562	AQR
RI	GET4	ENSG00000239857.2	chr7	+	933376	933608	933376	933452	933535	933608	0.12300	0.00000	0.00000	included	HepG2	RBM22
RI	GET4	ENSG00000239857.2	chr7	+	933376	933608	933376	933452	933535	933608	0.23400	0.00000	0.00000	included	K562	AQR
RI	GET4	ENSG00000239857.2	chr7	+	933376	933608	933376	933452	933535	933608	0.09600	0.00001	0.00233	included	K562	UCHL5
RI	GET4	ENSG00000239857.2	chr7	+	933376	933608	933376	933452	933535	933608	0.08100	0.00003	0.00066	included	K562	PRPF8
RI	GET4	ENSG00000239857.2	chr7	+	933376	933608	933376	933452	933535	933608	0.07900	0.00011	0.01897	included	K562	XRN2
RI	GET4	ENSG00000239857.2	chr7	+	933413	933608	933413	933452	933535	933608	0.06700	0.00021	0.00336	included	K562	EFTUD2
RI	GET4	ENSG00000239857.2	chr7	+	933376	933608	933376	933452	933535	933608	0.06700	0.00064	0.03029	included	K562	SUPV3L1
RI	GET4	ENSG00000239857.2	chr7	+	933376	933608	933376	933452	933535	933608	0.07500	0.00089	0.04471	included	K562	BUD13
RI	GET4	ENSG00000239857.2	chr7	+	933376	933608	933376	933452	933535	933608	-0.05600	0.00303	0.08075	excluded	K562	HNRNPUL1

Showing 1 to 10 of 11 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

GET4

General Information

Functions

Localization

Domains (AlphaFold: GET4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for GET4 is not avaliable on ENCORE database.

58 proteins are bound to GET4 RNA:

eCLIP assay for GET4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for GET4 is not available on ENCORE database.

105 RBPs can affect the gene expression of GET4 :

The Knockdown/knockout RNA-Seq assay for GET4 is not available on ENCORE database.

9 RBPs can affect the splicing of GET4 :

The Knockdown/knockout RNA-Seq assay for GET4 is not avaliable on ENCORE database.