ACAP3

General Information

Gene Name : ACAP3
Gene ID : ENSG00000131584.18
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ACAP3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ACAP3	ENSG00000131584.18	0.39	3.07	1.73	ENCSR000AEF
HepG2	ACAP3	ENSG00000131584.18	46.51	8.47	27.49	ENCSR985KAT
K562	ACAP3	ENSG00000131584.18	8.54	4.86	6.70	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ACAP3 is not avaliable on ENCORE database.

Proteins bound to RNA

ACAP3 RNA is bound by 51 proteins.

CanvasJS.com

eCLIP assay for ACAP3 is not avaliable on ENCORE database.

51 proteins are bound to ACAP3 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	1233469	1233552	-	CDS,intron-Distal,intron-Proximal	4.87396	36.60033	HepG2	EFTUD2
chr1	1233708	1233781	-	CDS,intron-Distal,intron-Proximal	4.50852	33.27873	HepG2	PRPF8
chr1	1236983	1237079	-	intron-Distal	5.28293	30.76800	HepG2	RBFOX2
chr1	1234955	1235057	-	intron-Distal,intron-Proximal	4.31306	29.80866	HepG2	RBFOX2
chr1	1235962	1236041	-	3'-UTR,CDS,intron-Distal	4.98988	29.68818	HepG2	PPIG
chr1	1234672	1234713	-	intron-Distal,intron-Proximal	3.91930	29.13029	HepG2	PRPF8
chr1	1234039	1234096	-	CDS,intron-Distal,intron-Proximal	4.98607	29.09568	K562	DDX24
chr1	1233968	1234039	-	CDS,intron-Distal,intron-Proximal	4.60773	28.03660	K562	DDX24
chr1	1234630	1234684	-	intron-Distal,intron-Proximal	4.59884	27.90964	K562	DDX24
chr1	1238301	1238342	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.95462	27.52603	HepG2	PPIG
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 424 entries

eCLIP assay for ACAP3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ACAP3 is not available on ENCORE database.
115 RBPs can affect the levels of ACAP3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ACAP3 is not available on ENCORE database.

115 RBPs can affect the gene expression of ACAP3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ACAP3	ENSG00000131584.14	1858.48770	800.81480	1.21450	54.24100	51.98900	HepG2	SLBP
ACAP3	ENSG00000131584.14	2363.14380	835.18360	1.50040	45.90530	43.86610	HepG2	PUF60
ACAP3	ENSG00000131584.14	679.70720	1584.14590	-1.22070	42.21690	40.28430	HepG2	UTP3
ACAP3	ENSG00000131584.14	1063.68770	461.46100	1.20470	35.00910	33.09690	HepG2	SAFB2
ACAP3	ENSG00000131584.14	1157.86770	508.01100	1.18840	34.38190	32.67020	HepG2	TRIM56
ACAP3	ENSG00000131584.14	452.10660	1076.15440	-1.25120	29.85560	28.27310	HepG2	TAF15
ACAP3	ENSG00000131584.14	1582.56380	824.62450	0.94040	26.88400	25.21510	HepG2	SRSF5
ACAP3	ENSG00000131584.14	2962.82390	1705.43520	0.79670	23.70630	22.53190	HepG2	SSB
ACAP3	ENSG00000131584.14	977.09550	518.18060	0.91490	19.94890	18.43420	HepG2	HNRNPU
ACAP3	ENSG00000131584.14	658.99400	1197.29570	-0.86140	18.68710	17.68670	HepG2	SRSF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 139 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ACAP3 is not available on ENCORE database.

11 RBPs can affect the splicing of ACAP3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
MXE	ACAP3	ENSG00000131584.14	chr1	-	1238541	1238661	1239465	1239523	1238301	1238355	1243148	1243269	-0.29500	0.00001	0.00443	2included	K562	WDR43
SE	ACAP3	ENSG00000131584.14	chr1	-	1229781	1230008			1229469	1229579	1230097	1230196	0.07500	0.00012	0.02270	included	HepG2	RBFOX2
A3SS	ACAP3	ENSG00000131584.14	chr1	-	1235537	1235642			1235537	1235582	1235888	1236072	0.09300	0.00023	0.03634	longer	HepG2	PCBP1
SE	ACAP3	ENSG00000131584.14	chr1	-	1233564	1233662			1233409	1233493	1233749	1233801	0.09600	0.00024	0.08025	included	HepG2	BCCIP
SE	ACAP3	ENSG00000131584.14	chr1	-	1229781	1230008			1229469	1229579	1230097	1230196	0.07700	0.00068	0.01012	included	HepG2	U2AF2
A3SS	ACAP3	ENSG00000131584.14	chr1	-	1235537	1235642			1235537	1235582	1235888	1236072	0.07300	0.00084	0.07616	longer	HepG2	SRSF1
A3SS	ACAP3	ENSG00000131584.14	chr1	-	1230097	1230221			1230097	1230196	1230826	1230934	0.09800	0.00123	0.08284	longer	HepG2	SF3A3
A3SS	ACAP3	ENSG00000131584.14	chr1	-	1230097	1230221			1230097	1230196	1230826	1230934	0.15800	0.00261	0.01632	longer	K562	AQR
MXE	ACAP3	ENSG00000131584.14	chr1	-	1235352	1235448	1235537	1235582	1235210	1235285	1235888	1236072	0.16300	0.00533	0.09706	1included	HepG2	XRN2
RI	ACAP3	ENSG00000131584.14	chr1	-	1235352	1235558			1235352	1235406	1235537	1235558	0.19700	0.00553	0.07711	included	HepG2	TIAL1

Showing 1 to 10 of 11 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ACAP3

General Information

Functions

Localization

Domains (AlphaFold: ACAP3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ACAP3 is not avaliable on ENCORE database.

51 proteins are bound to ACAP3 RNA:

eCLIP assay for ACAP3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ACAP3 is not available on ENCORE database.

115 RBPs can affect the gene expression of ACAP3 :

The Knockdown/knockout RNA-Seq assay for ACAP3 is not available on ENCORE database.

11 RBPs can affect the splicing of ACAP3 :

The Knockdown/knockout RNA-Seq assay for ACAP3 is not avaliable on ENCORE database.