DCXR

General Information

Gene Name : DCXR
Gene ID : ENSG00000169738.7
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: DCXR)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	DCXR	ENSG00000169738.7	28.76	62.58	45.67	ENCSR000AEF
HepG2	DCXR	ENSG00000169738.7	246.19	130.73	188.46	ENCSR985KAT
K562	DCXR	ENSG00000169738.7	175.29	184.52	179.91	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for DCXR is not avaliable on ENCORE database.

Proteins bound to RNA

DCXR RNA is bound by 21 proteins.

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eCLIP assay for DCXR is not avaliable on ENCORE database.

21 proteins are bound to DCXR RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	79993762	79993840	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.61488	25.63667	HepG2	PCBP2
chr17	79995113	79995179	-	intron-Distal,intron-Proximal	3.97219	25.12966	HepG2	EFTUD2
chr17	79994554	79994613	-	CDS,intron-Distal,intron-Proximal	4.48717	23.99255	HepG2	PRPF8
chr17	79994376	79994421	-	CDS,intron-Distal,intron-Proximal	4.92963	21.46127	HepG2	PRPF8
chr17	79993815	79993891	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.03083	19.60690	HepG2	LARP4
chr17	79994208	79994268	-	CDS,intron-Distal,intron-Proximal	3.06750	19.13611	HepG2	PRPF8
chr17	79993841	79993931	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.18059	18.24884	K562	PABPC4
chr17	79994589	79994617	-	CDS,intron-Distal,intron-Proximal	4.41975	17.88761	HepG2	PPIG
chr17	79994275	79994340	-	CDS,intron-Distal,intron-Proximal	3.35693	17.47378	HepG2	PRPF8
chr17	79993775	79993841	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.73416	16.20576	K562	PABPC4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 64 entries

eCLIP assay for DCXR is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for DCXR is not available on ENCORE database.
91 RBPs can affect the levels of DCXR.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for DCXR is not available on ENCORE database.

91 RBPs can affect the gene expression of DCXR :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
DCXR	ENSG00000169738.3	2473.69830	1099.66380	1.16950	39.96050	37.60180	K562	RBM15
DCXR	ENSG00000169738.3	515.03410	1305.29740	-1.34160	37.04080	35.56880	HepG2	RBM22
DCXR	ENSG00000169738.3	634.03850	1474.31600	-1.21740	34.26560	33.01810	HepG2	SRFBP1
DCXR	ENSG00000169738.3	2349.01970	1280.10870	0.87570	31.18940	29.89370	HepG2	SSB
DCXR	ENSG00000169738.3	1864.09600	1093.68680	0.76920	20.56780	19.13520	K562	AGGF1
DCXR	ENSG00000169738.3	1154.38950	648.51740	0.83180	18.56120	17.26970	HepG2	TRIM56
DCXR	ENSG00000169738.3	1656.11240	1029.24580	0.68610	18.67420	17.06930	HepG2	HNRNPL
DCXR	ENSG00000169738.3	1515.63130	889.61370	0.76860	17.68500	16.30780	HepG2	DKC1
DCXR	ENSG00000169738.3	40.59600	252.55100	-2.63720	18.20440	15.94910	K562	G3BP2
DCXR	ENSG00000169738.3	1842.07560	1069.50170	0.78430	13.15930	11.98880	HepG2	PUF60
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 108 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for DCXR is not available on ENCORE database.

43 RBPs can affect the splicing of DCXR :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	DCXR	ENSG00000169738.3	chr17	-	79994259	79994324	79994066	79994184	79994419	79994605	-0.07400	0.00042	excluded	K562	TARDBP
SE	DCXR	ENSG00000169738.3	chr17	-	79994259	79994324	79994066	79994184	79994419	79994519	-0.08900	0.00000	excluded	K562	HNRNPC
A3SS	DCXR	ENSG00000169738.3	chr17	-	79994066	79994324	79994066	79994184	79994419	79994519	-0.17000	0.00003	shorter	K562	HNRNPC
RI	DCXR	ENSG00000169738.3	chr17	-	79994066	79994519	79994066	79994324	79994419	79994519	0.31400	0.00000	included	K562	SF3B4
RI	DCXR	ENSG00000169738.3	chr17	-	79994066	79994519	79994066	79994324	79994419	79994519	0.13400	0.00000	included	HepG2	PCBP2
RI	DCXR	ENSG00000169738.3	chr17	-	79994066	79994324	79994066	79994184	79994259	79994324	0.11400	0.00000	included	K562	PUS1
RI	DCXR	ENSG00000169738.3	chr17	-	79994066	79994519	79994066	79994324	79994419	79994519	0.19700	0.00000	included	K562	PUS1
RI	DCXR	ENSG00000169738.3	chr17	-	79994734	79995423	79994734	79994889	79995325	79995423	0.28000	0.00004	included	K562	PUS1
RI	DCXR	ENSG00000169738.3	chr17	-	79994596	79994889	79994596	79994639	79994734	79994889	0.06200	0.00000	included	K562	PUS1
RI	DCXR	ENSG00000169738.3	chr17	-	79994066	79994519	79994066	79994324	79994419	79994519	0.14600	0.00000	included	HepG2	SF3A3

Showing 1 to 10 of 88 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

DCXR

General Information

Functions

Localization

Domains (AlphaFold: DCXR)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for DCXR is not avaliable on ENCORE database.

21 proteins are bound to DCXR RNA:

eCLIP assay for DCXR is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for DCXR is not available on ENCORE database.

91 RBPs can affect the gene expression of DCXR :

The Knockdown/knockout RNA-Seq assay for DCXR is not available on ENCORE database.

43 RBPs can affect the splicing of DCXR :

The Knockdown/knockout RNA-Seq assay for DCXR is not avaliable on ENCORE database.