UTP6

General Information

Gene Name : UTP6
Gene ID : ENSG00000108651.9
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: UTP6)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	UTP6	ENSG00000108651.9	44.08	40.38	42.23	ENCSR000AEF
HepG2	UTP6	ENSG00000108651.9	37.96	76.28	57.12	ENCSR985KAT
K562	UTP6	ENSG00000108651.9	67.63	62.69	65.16	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for UTP6 is not avaliable on ENCORE database.

Proteins bound to RNA

UTP6 RNA is bound by 24 proteins.

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eCLIP assay for UTP6 is not avaliable on ENCORE database.

24 proteins are bound to UTP6 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	30207571	30207766	-	CDS,intron-Distal,intron-Proximal	3.46346	26.17181	K562	UCHL5
chr17	30205363	30205415	-	intron-Distal,intron-Proximal	6.85222	25.42038	HepG2	SF3B4
chr17	30207574	30207738	-	CDS,intron-Distal,intron-Proximal	3.01747	21.58394	K562	ZNF622
chr17	30213002	30213081	-	CDS,intron-Distal,intron-Proximal	4.32713	17.33108	K562	UCHL5
chr17	30190352	30190533	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.09162	16.76617	K562	UCHL5
chr17	30228554	30228682	-	5'-UTR,CDS,intron-Distal	3.31769	15.94100	K562	ZNF622
chr17	30213009	30213081	-	CDS,intron-Distal,intron-Proximal	5.17116	15.46734	K562	ZNF622
chr17	30228581	30228752	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.26738	14.15762	K562	DDX3X
chr17	30205366	30205414	-	intron-Distal,intron-Proximal	6.32941	13.04469	K562	SF3B4
chr17	30200629	30200746	-	CDS,intron-Distal,intron-Proximal	4.91902	12.49389	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 69 entries

eCLIP assay for UTP6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for UTP6 is not available on ENCORE database.
70 RBPs can affect the levels of UTP6.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for UTP6 is not available on ENCORE database.

70 RBPs can affect the gene expression of UTP6 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
UTP6	ENSG00000108651.5	1236.81780	2483.71440	-1.00590	18.94610	16.77410	K562	TARDBP
UTP6	ENSG00000108651.5	755.17390	2203.97580	-1.54520	17.84540	16.41170	K562	HNRNPC
UTP6	ENSG00000108651.5	1527.35840	997.77760	0.61410	12.27620	11.43180	HepG2	SRSF1
UTP6	ENSG00000108651.5	1767.65970	2518.32720	-0.51060	12.01670	10.46680	K562	MTPAP
UTP6	ENSG00000108651.5	679.17350	1089.35000	-0.68160	11.57460	10.31850	HepG2	SRSF7
UTP6	ENSG00000108651.5	517.44870	953.85030	-0.88230	10.24760	9.12500	HepG2	HNRNPLL
UTP6	ENSG00000108651.5	758.69560	1251.60360	-0.72220	9.56480	8.54760	HepG2	PUF60
UTP6	ENSG00000108651.5	2189.67330	3069.03840	-0.48710	9.63410	8.41620	K562	EIF2S2
UTP6	ENSG00000108651.5	5237.58540	3303.53720	0.66480	9.17370	8.07120	K562	DDX47
UTP6	ENSG00000108651.5	499.91600	795.38800	-0.67000	8.10630	7.33210	HepG2	TIAL1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 86 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for UTP6 is not available on ENCORE database.

8 RBPs can affect the splicing of UTP6 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	UTP6	ENSG00000108651.5	chr17	-	30192384	30192457	30187922	30190535	30195064	30195270	-0.08100	0.00000	excluded	K562	AQR
SE	UTP6	ENSG00000108651.5	chr17	-	30205720	30205800	30205268	30205346	30207591	30207790	-0.06700	0.00000	excluded	K562	AQR
SE	UTP6	ENSG00000108651.5	chr17	-	30216303	30216422	30214254	30214332	30219278	30219370	-0.06400	0.00002	excluded	K562	AQR
SE	UTP6	ENSG00000108651.5	chr17	-	30211442	30211524	30207591	30207773	30212998	30213080	-0.18800	0.00000	excluded	K562	AQR
SE	UTP6	ENSG00000108651.5	chr17	-	30193673	30193734	30192384	30192457	30195064	30195131	0.29600	0.00000	included	K562	HNRNPC
SE	UTP6	ENSG00000108651.5	chr17	-	30192384	30192457	30190367	30190535	30195064	30195131	-0.13600	0.00000	excluded	K562	HNRNPC
A3SS	UTP6	ENSG00000108651.5	chr17	-	30190367	30190565	30190367	30190535	30192384	30192599	0.09100	0.00000	longer	K562	AQR
A3SS	UTP6	ENSG00000108651.5	chr17	-	30221988	30222089	30221988	30222030	30226664	30226851	0.05600	0.00000	longer	K562	AQR
A3SS	UTP6	ENSG00000108651.5	chr17	-	30214254	30214489	30214254	30214332	30216303	30216404	0.13800	0.00000	longer	K562	AQR
A3SS	UTP6	ENSG00000108651.5	chr17	-	30205272	30205463	30205272	30205346	30205720	30205835	0.12700	0.00000	longer	K562	AQR

Showing 1 to 10 of 125 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

UTP6

General Information

Functions

Localization

Domains (AlphaFold: UTP6)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for UTP6 is not avaliable on ENCORE database.

24 proteins are bound to UTP6 RNA:

eCLIP assay for UTP6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for UTP6 is not available on ENCORE database.

70 RBPs can affect the gene expression of UTP6 :

The Knockdown/knockout RNA-Seq assay for UTP6 is not available on ENCORE database.

8 RBPs can affect the splicing of UTP6 :

The Knockdown/knockout RNA-Seq assay for UTP6 is not avaliable on ENCORE database.