NFYA

General Information

Gene Name       : NFYA
Gene ID             : ENSG00000001167.14
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: NFYA)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NFYAENSG00000001167.1422.2624.8323.55ENCSR000AEF
HepG2NFYAENSG00000001167.1441.5537.3239.44ENCSR985KAT
K562NFYAENSG00000001167.1422.5424.9423.74ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NFYA is not avaliable on ENCORE database.



Proteins bound to RNA
  • NFYA RNA is bound by 16 proteins.  







eCLIP assay for NFYA is not avaliable on ENCORE database.





16 proteins are bound to NFYA RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr64106555441065623+3'-UTR4.661026.61780K562IGF2BP2
chr64106748441067538+3'-UTR3.597427.55430K562PUM2
chr64106547741065601+3'-UTR3.786906.49446K562IGF2BP1
chr64106711041067215+3'-UTR6.8401524.19330K562PUM2
chr64106605241066171+3'-UTR4.634148.85840K562UPF1
chr64106718241067281+3'-UTR3.818213.21228K562TIA1
chr64106534141065452+3'-UTR4.578795.85529K562RBM15
chr64106714041067232+3'-UTR3.893533.68079HepG2FUBP3
chr64106713741067219+3'-UTR4.140446.48274K562UPF1
chr64106541441065521+3'-UTR4.479545.41597HepG2UPF1
chr64104071141040760+5'-UTR3.574954.11395HepG2NCBP2
chr64104076041040826+5'-UTR,intron-Proximal4.804936.92972HepG2NCBP2
chr64104072441040824+5'-UTR,intron-Proximal3.874878.96385K562DDX3X
chr64105177441051853+CDS,intron-Proximal4.492275.27543K562U2AF2
chr64106063241060691+CDS,intron-Proximal3.184014.38519K562BUD13
chr64105941341059465+CDS,intron-Proximal4.166325.05356HepG2PRPF8
chr64106059841060686+CDS,intron-Proximal5.700718.42776K562SF3B4
chr64105730541057388+CDS,intron-Proximal4.373707.93461K562BUD13
chr64105176841051831+CDS,intron-Proximal4.227575.60471HepG2U2AF2
chr64104689741046963+CDS,intron-Proximal4.739114.48002K562AQR
chr64105176741051831+CDS,intron-Proximal4.261565.29272K562BUD13
chr64106061841060724+CDS,intron-Proximal4.486338.96810HepG2BUD13
chr64106398241064060+intron-Distal4.688105.58765HepG2QKI
chr64106385041063982+intron-Distal4.822326.93116HepG2QKI
chr64104198941042052+intron-Distal4.198484.30850HepG2QKI
chr64104654141046670+intron-Distal,intron-Proximal4.088793.22073HepG2KHSRP
chr64104652041046624+intron-Distal3.745615.95946K562KHSRP
chr64105804841058131+intron-Proximal4.784594.13847K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NFYA is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NFYA is not available on ENCORE database.

  • 89 RBPs can affect the levels of NFYA.  








The Knockdown/knockout RNA-Seq assay for NFYA is not available on ENCORE database.





89 RBPs can affect the gene expression of NFYA :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NFYAENSG00000001167.101342.88070981.570800.452107.400906.50430HepG2ACO1
NFYAENSG00000001167.101702.143701042.724400.706906.845106.05000HepG2AKAP1
NFYAENSG00000001167.101292.91550862.762600.583505.409104.32770HepG2ASCC1
NFYAENSG00000001167.101387.205601612.81400-0.217402.205201.57960HepG2AUH
NFYAENSG00000001167.10887.283001931.62960-1.1224023.2728021.80300HepG2BOP1
NFYAENSG00000001167.10929.859401174.80330-0.337303.130702.31470HepG2CALR
NFYAENSG00000001167.101150.41780819.685200.488903.956503.04190HepG2CIRBP
NFYAENSG00000001167.10733.095501773.36470-1.2744026.2272024.38750HepG2CPSF6
NFYAENSG00000001167.10661.49160854.84460-0.369902.676802.00850HepG2DDX21
NFYAENSG00000001167.101005.589602013.77810-1.001907.989906.37580HepG2DDX59
NFYAENSG00000001167.10746.13380923.68340-0.308002.662301.96930HepG2DNAJC21
NFYAENSG00000001167.10701.14170915.58350-0.385004.875104.04850HepG2DNAJC2
NFYAENSG00000001167.10550.11950824.84040-0.584404.587303.83460HepG2EIF2S1
NFYAENSG00000001167.101033.62890711.126600.539404.644003.49560HepG2EIF3D
NFYAENSG00000001167.10655.35850887.52730-0.437502.216001.59700HepG2EIF4B
NFYAENSG00000001167.102762.295501851.723700.5769014.3699013.17050HepG2ETF1
NFYAENSG00000001167.101310.85160959.078700.450704.704903.62070HepG2EWSR1
NFYAENSG00000001167.101278.630502010.31120-0.652806.783705.80840HepG2GPKOW
NFYAENSG00000001167.101053.318701267.05720-0.266502.578401.67230HepG2HNRNPA2B1
NFYAENSG00000001167.101119.033901691.44280-0.5960011.8625010.51870HepG2HNRNPF
NFYAENSG00000001167.101170.51660863.950500.438003.552402.76700HepG2HNRNPK
NFYAENSG00000001167.10858.974601255.90810-0.5480010.597009.35740HepG2HNRNPL
NFYAENSG00000001167.101146.349801918.47120-0.742906.632805.70440HepG2HNRNPLL
NFYAENSG00000001167.101065.83910872.500900.288702.348501.47080HepG2HNRNPM
NFYAENSG00000001167.101137.646001665.59800-0.550007.539706.40000HepG2IGF2BP1
NFYAENSG00000001167.101144.93810867.222800.400702.827602.14630HepG2IGF2BP2
NFYAENSG00000001167.10734.60310948.51450-0.368702.553901.39200HepG2LIN28B
NFYAENSG00000001167.101391.71540920.053500.597005.644904.71930HepG2MAGOH
NFYAENSG00000001167.101395.446101956.45100-0.487503.064602.04170HepG2MTPAP
NFYAENSG00000001167.101440.31640946.987200.604905.660904.77040HepG2NCBP2
NFYAENSG00000001167.101256.553601701.04500-0.436904.072203.16930HepG2NSUN2
NFYAENSG00000001167.10831.553601019.92600-0.294602.769301.92090HepG2PARN
NFYAENSG00000001167.10647.27830919.05810-0.505806.034804.97890HepG2PPIL4
NFYAENSG00000001167.10660.13790889.39590-0.430102.815401.99950HepG2PRPF8
NFYAENSG00000001167.101468.02410890.256500.7215015.4110014.32010HepG2PTBP1
NFYAENSG00000001167.10995.765801305.02960-0.390203.529302.86720HepG2PUF60
NFYAENSG00000001167.101440.64970942.405600.612203.345502.57300HepG2RAVER1
NFYAENSG00000001167.102937.680801547.698900.9245029.9159028.57620HepG2RBM22
NFYAENSG00000001167.101288.07700875.074200.557606.539605.54340HepG2RBM25
NFYAENSG00000001167.101203.61110990.790800.280602.546702.02470HepG2NELFE
NFYAENSG00000001167.10959.06140691.885200.471003.771603.06420HepG2RPS19
NFYAENSG00000001167.101258.862201004.602400.325402.198401.48070HepG2RPS2
NFYAENSG00000001167.10587.74980824.16090-0.487702.885801.54850HepG2SART3
NFYAENSG00000001167.102001.584601328.499000.591204.478803.60980HepG2SF3A3
NFYAENSG00000001167.101298.634601898.94450-0.548206.413105.37600HepG2SF3B1
NFYAENSG00000001167.10834.270801251.29800-0.5848011.5054010.23720HepG2SLBP
NFYAENSG00000001167.101685.591801070.096000.6554018.3855016.95010HepG2SMN1
NFYAENSG00000001167.101587.917302112.89550-0.412102.188901.49810HepG2SNRNP70
NFYAENSG00000001167.102111.17110967.482101.1256042.4258041.05840HepG2SRSF1
NFYAENSG00000001167.101234.792201661.75290-0.428406.528605.53200HepG2SRSF7
NFYAENSG00000001167.101003.76730787.082500.350703.872203.24170HepG2SRSF9
NFYAENSG00000001167.101738.754901517.740200.196001.985701.53320HepG2SSB
NFYAENSG00000001167.102397.650701465.406100.7102022.9826021.47110HepG2SUCLG1
NFYAENSG00000001167.10650.399701869.74530-1.5234037.6970035.60210HepG2TARDBP
NFYAENSG00000001167.10823.835301001.18500-0.281302.079001.63290HepG2TIAL1
NFYAENSG00000001167.10658.855201010.21050-0.616608.465007.56390HepG2TRIM56
NFYAENSG00000001167.101656.567701081.676500.614807.326306.31110HepG2U2AF1
NFYAENSG00000001167.10446.89460678.01170-0.601404.733403.73580HepG2UCHL5
NFYAENSG00000001167.10947.734601178.17470-0.314003.601102.82010HepG2UPF1
NFYAENSG00000001167.10763.728401050.97300-0.460602.470001.52450HepG2UPF2
NFYAENSG00000001167.10530.54480783.94460-0.563303.434702.20340HepG2XPO5
NFYAENSG00000001167.101671.261401036.371300.689305.397403.94170HepG2XRCC6
NFYAENSG00000001167.10783.019101129.84600-0.529004.366203.46110HepG2XRN2
NFYAENSG00000001167.10878.460201295.76780-0.5608011.7373010.80340HepG2ZNF622
NFYAENSG00000001167.101269.89580875.676600.536108.450607.53090K562AGGF1
NFYAENSG00000001167.101318.09390911.172400.532605.641604.69090K562AKAP8L
NFYAENSG00000001167.10699.27050892.63340-0.352203.507002.42070K562BCLAF1
NFYAENSG00000001167.10868.824101119.60120-0.365802.536101.70170K562BOP1
NFYAENSG00000001167.10797.426701190.49950-0.578106.392005.20060K562CPSF6
NFYAENSG00000001167.10514.44960677.19530-0.396502.870601.79510K562CSTF2
NFYAENSG00000001167.101223.78240980.541800.319603.220102.26660K562DKC1
NFYAENSG00000001167.10876.008901309.62110-0.580106.466805.12960K562FIP1L1
NFYAENSG00000001167.101003.16020756.277600.407504.378503.64150K562FXR1
NFYAENSG00000001167.10908.965501136.66770-0.322502.346601.61430K562GPKOW
NFYAENSG00000001167.10553.56030782.57050-0.499504.177103.45890K562HNRNPC
NFYAENSG00000001167.10835.331901076.94550-0.366503.588102.57080K562HNRNPU
NFYAENSG00000001167.101388.900601775.61330-0.354402.936702.11740K562HSPD1
NFYAENSG00000001167.101246.91200967.012400.366703.013202.15000K562KIF1C
NFYAENSG00000001167.101345.777801083.293900.312902.240401.43640K562MBNL1
NFYAENSG00000001167.10739.801401109.50030-0.584706.567605.19150K562METAP2
NFYAENSG00000001167.101103.236101486.63270-0.430303.950802.94650K562PPIG
NFYAENSG00000001167.101145.99170756.865300.598405.921104.82210K562PRPF8
NFYAENSG00000001167.101745.60660903.695800.9497014.9696013.74820K562PUS1
NFYAENSG00000001167.101471.67740880.463400.741008.895407.85890K562RBM15
NFYAENSG00000001167.101072.80900674.428500.669602.447001.34510K562SF1
NFYAENSG00000001167.101564.126701196.844700.386004.867203.81070K562SF3A3
NFYAENSG00000001167.10938.93560747.939800.328002.764101.90980K562SF3B4
NFYAENSG00000001167.10674.41250842.13330-0.320402.199701.56070K562SRSF1
NFYAENSG00000001167.10618.77610795.32100-0.362102.418201.44660K562SRSF5
NFYAENSG00000001167.101352.71770898.361700.590406.402005.14590K562SYNCRIP
NFYAENSG00000001167.10616.30060822.14000-0.415703.498002.56210K562TIA1
NFYAENSG00000001167.10976.83370697.262300.486303.453402.20430K562U2AF1
NFYAENSG00000001167.10982.91170720.058800.448804.574303.54750K562U2AF2
NFYAENSG00000001167.101007.409001286.22490-0.352502.951002.20860K562UPF1
NFYAENSG00000001167.10835.943301100.59380-0.396803.671602.66350K562WDR3
NFYAENSG00000001167.101326.262701144.409300.212702.048101.31280K562WDR43
NFYAENSG00000001167.101371.909301684.72620-0.296302.399501.60490K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NFYA is not available on ENCORE database.





12 RBPs can affect the splicing of NFYA :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENFYAENSG00000001167.10chr6+4104854941048636410467674104690341051784410519310.295000.000000.00002includedHepG2G3BP1
SENFYAENSG00000001167.10chr6+4104854941048636410467674104690341051784410519310.280000.000070.00222includedK562SRSF1
SENFYAENSG00000001167.10chr6+410485494104863641046782410469034105178441051931-0.066000.003930.06250excludedHepG2U2AF1
SENFYAENSG00000001167.10chr6+4104854941048636410467824104690341051784410519310.130000.000670.01930includedHepG2HNRNPK
SENFYAENSG00000001167.10chr6+4104854941048636410467824104690341051784410519310.176000.000010.00174includedHepG2AKAP1
SENFYAENSG00000001167.10chr6+410467674104690341040721410408234105178441051931-0.073000.008320.09122excludedK562PUS1
SENFYAENSG00000001167.10chr6+4104854941048636410467434104690341051784410519310.124000.001540.05777includedHepG2MATR3
SENFYAENSG00000001167.10chr6+4104854941048636410467434104690341051784410519310.150000.000580.06830includedHepG2KHSRP
A3SSNFYAENSG00000001167.10chr6+4105926641059433410592844105943341057942410580480.103000.000310.03276longerK562AGGF1
A3SSNFYAENSG00000001167.10chr6+410592664105943341059284410594334105794241058048-0.291000.000040.00817shorterK562FXR1
A3SSNFYAENSG00000001167.10chr6+4105926641059433410592844105943341057942410580480.250000.000000.00492longerHepG2PRPF4
A3SSNFYAENSG00000001167.10chr6+4104674341046903410467674104690341040721410408230.127000.000140.00122longerK562AQR
A3SSNFYAENSG00000001167.10chr6+4105926641059433410592844105943341057942410580480.202000.000100.00088longerK562AQR
A3SSNFYAENSG00000001167.10chr6+4105926641059433410592844105943341057942410580480.217000.000020.00165longerHepG2U2AF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NFYA is not avaliable on ENCORE database.